Freshwater Biology

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  1. 2024
  2. Published

    Recent progress in understanding the cellular and genetic basis of plant responses to low oxygen holds promise for developing flood-resilient crops

    Fagerstedt, K. V., Pucciariello, C., Pedersen, Ole & Perata, P., 2024, In: Journal of Experimental Botany. 75, 5, p. 1217–1233 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Response of underwater photosynthesis to light, CO2, temperature, and submergence time of Taxodium distichum, a flood-tolerant tree

    Guo, J., Xue, J., Yin, Y., Pedersen, Ole & Hua, J., 2024, In: Frontiers in Plant Science. 15, 13 p., 1355729.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Regional impacts of warming on biodiversity and biomass in high latitude stream ecosystems across the Northern Hemisphere

    Jackson, M. C., Friberg, N., Moliner Cachazo, L., Clark, D. R., Mutinova, P. T., O’Gorman, E. J., Kordas, R. L., Gallo, B., Pichler, D. E., Bespalaya, Y., Aksenova, O. V., Milner, A., Brooks, S. J., Dunn, N., Lee, K. W. K., Ólafsson, J. S., Gíslason, G. M., Millan, L., Bell, T., Dumbrell, A. J. & 1 others, Woodward, G., 2024, In: Communications Biology . 7, 1, 8 p., 316.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Flooding stress and responses to hypoxia in plants

    Jimenez Serna, Juan de la Cruz, Mustroph, A., Pedersen, Ole, Weits, D. A. & Schmidt-schippers, R., 2024, In: Functional Plant Biology. 51, 4, 5 p., FP24061.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. E-pub ahead of print

    Overcoming constraints to measuring O2 diffusivity and consumption of intact roots

    Jimenez Serna, Juan de la Cruz, Armstrong, W., Colmer, T. D. & Pedersen, Ole, 2024, (E-pub ahead of print) In: Plant Physiology. kiae046.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  7. Published

    Flooding-adaptive root and shoot traits in rice

    Lin, C., Zhang, Z., Shen, X., Liu, Dan & Pedersen, Ole, 2024, In: Functional Plant Biology. 51, 1, 13 p., FP23226.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Long-term phytoplankton dynamics in two High Arctic lakes (north-east Greenland)

    Moedt, Sanne Mariël, Olrik, K., Schmidt, N. M., Jeppesen, E. & Christoffersen, Kirsten Seestern, 2024, In: Freshwater Biology. 69, 3, p. 403-415 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Function and induction of the root barrier to radial O2 loss. A commentary on ‘Exogenous abscisic acid induces the formation of a suberized barrier to radial oxygen loss in adventitious roots of barley (Hordeum vulgare)’

    Pedersen, Ole & Jimenez Serna, Juan de la Cruz, 2024, In: Annals of Botany.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  10. Published

    Root acclimations to soil flooding prime rice (Oryza sativa L.) for subsequent conditions of water deficit

    Peralta Ogorek, Lucas León, Song, Zhiwei, Pellegrini, Elisa, Liu, Fulai, Tomasella, M., Nardini, A. & Pedersen, Ole, 2024, In: Plant and Soil. 494, p. 529-546

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Water quality in a shallow eutrophic lake is unaffected by extensive thinning of planktivorous and benthivorous fish species

    Polauke, E., Sø, Jonas Stage, Carl, Henrik, Møller, Peter Rask, Reitzel, K., Sand-Jensen, Kaj & Kragh, T., 2024, In: Journal of Environmental Management. 356

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Meta‐analysis Contrasting Freshwater Biodiversity in Forests and Oil Palm Plantations with and without Riparian Buffers

    Rojas‐Castillo, O. A., Kepfer Rojas, Sebastian, Juen, L., Fogaça De Assis Montag, L., Carvalho, F. G., Mendes, T. P., Chua, K. W. J., Wilkinson, C. L., Amal, M. N. A., Fahmi‐Ahmad, M. & Jacobsen, Dean, 2024, In: Conservation Biology. 38, 1, p. 1-14 14 p., e14172.

    Research output: Contribution to journal › Review › Research › peer-review

  13. Published

    Hourly methane and carbon dioxide fluxes from temperate ponds

    Sø, Jonas Stage, Martinsen, Kenneth Thorø, Kragh, T. & Sand-Jensen, Kaj, 2024, In: Biogeochemistry. 167, p. 177-195 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. E-pub ahead of print

    Hypoxia in tomato (Solanum lycopersicum) fruit during ripening: Biophysical elucidation by a 3D reaction–diffusion model

    Xiao, H., Verboven, P., Tong, Shuai, Pedersen, Ole & Nicolaï, B., 2024, (E-pub ahead of print) In: Plant Physiology.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. 2023
  16. Published

    Rapid and continuing regional decline of butterflies in eastern Denmark 1993-2019

    Bjerregård, E. B., Båstrup-Spohr, Lars, Markussen, Bo & Bruun, Hans Henrik, 2023, In: Biological Conservation. 284, 8 p., 110208.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Legally protect marine food web’s lower echelons

    Bürkert, Johanna Sophie, Catonini, Federica, Bittner, Meriel Jennifer, Moedt, Sanne Mariël & Lützenburg, Gregor, 2023, In: Nature. 614, p. 624

    Research output: Contribution to journal › Comment/debate › Research

  18. Published

    Restricted O2 consumption in pea roots induced by hexanoic acid is linked to depletion of Krebs cycle substrates

    Casolo, V., Zancani, M., Pellegrini, Elisa, Filippi, A., Gargiulo, S., Konnerup, D., Morandini, P. & Pedersen, Ole, 2023, In: Physiologia Plantarum. 175, 5, 13 p., e14024.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Bacterial bioindicators enable biological status classification along the continental Danube river

    Fontaine, L., Pin, L., Savio, D., Friberg, N., Kirschner, A. K. T., Farnleitner, A. H. & Eiler, A., 2023, In: Communications Biology . 6, 1, 11 p., 862.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Compositional breakpoints of freshwater plant communities across continents

    García-Girón, J., Heino, J., Båstrup-Spohr, Lars, Clayton, J., Winton, M. D., Feldmann, T., Fernández-Aláez, C., Ecke, F., Grillas, P., Hoyer, M. V., Kolada, A., Kosten, S., Lukács, B. A., Mjelde, M., Mormul, R. P., Rhazi, L., Rhazi, M., Sass, L., Xu, J. & Alahuhta, J., 2023, In: Limnetica. 42, 2, 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Restricted O2 consumption in pea roots induced by hexanoic acid is linked to depletion of Krebs cycle substrates

    Gargiulo, S., Casolo, V., Zancani, M., Pellegrini, Elisa, Filippi, A., Konnerup, D., Morandini, P. & Pedersen, Ole, 2023, p. 55. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  22. Published

    The global EPTO database: Worldwide occurrences of aquatic insects

    Grigoropoulou, A., Hamid, S. A., Acosta, R., Akindele, E. O., Al‐shami, S. A., Altermatt, F., Amatulli, G., Angeler, D. G., Arimoro, F. O., Aroviita, J., Astorga‐roine, A., Bastos, R. C., Bonada, N., Boukas, N., Brand, C., Bremerich, V., Bush, A., Cai, Q., Callisto, M., Chen, K. & 73 others, Cruz, P. V., Dangles, O., Death, R., Deng, X., Domínguez, E., Dudgeon, D., Eriksen, T. E., Faria, A. P. J., Feio, M. J., Fernández‐aláez, C., Floury, M., García‐criado, F., García‐girón, J., Graf, W., Grönroos, M., Haase, P., Hamada, N., He, F., Heino, J., Holzenthal, R., Huttunen, K., Jacobsen, Dean, Jähnig, S. C., Jetz, W., Johnson, R. K., Juen, L., Kalkman, V., Kati, V., Keke, U. N., Koroiva, R., Kuemmerlen, M., Langhans, S. D., Ligeiro, R., Van looy, K., Maasri, A., Marchant, R., Garcia marquez, J. R., Martins, R. T., Melo, A. S., Metzeling, L., Miserendino, M. L., Moe, S. J., Molineri, C., Muotka, T., Mustonen, K., Mykrä, H., Cavalcante do nascimento, J. M., Valente‐neto, F., Neu, P. J., Nieto, C., Pauls, S. U., Paulson, D. R., Rios‐touma, B., Rodrigues, M. E., De Oliveira roque, F., Salazar Salina, J., Schmera, D., Schmidt‐kloiber, A., Shah, D., Simaika, J. P., Siqueira, T., Tachamo‐shah, R. D., Theischinger, G., Thompson, R., Tonkin, J. D., Torres‐cambas, Y., Townsend, C., Turak, E., Twardochleb, L., Wang, B., Yanygina, L., Zamora‐muñoz, C. & Domisch, S., 2023, In: Global Ecology and Biogeography. 32, 5, 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Estuarine Seagrasses

    Gruber, R. K., Gurbisz, C., Borum, Jens & Kemp, W. M., 2023, Estuarine Ecology. Crump, B. C., Testa, J. M. & Dunton, K. H. (eds.). 3 ed. John/Wiley & Sons, Inc. John/Wiley & Sons Ltd., 20 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  24. Published

    The recovery of European freshwater biodiversity has come to a halt

    Haase, P., Bowler, D. E., Baker, N. J., Bonada, N., Domisch, S., Garcia Marquez, J. R., Heino, J., Hering, D., Jähnig, S. C., Schmidt-Kloiber, A., Stubbington, R., Altermatt, F., Álvarez-Cabria, M., Amatulli, G., Angeler, D. G., Archambaud-Suard, G., Jorrín, I. A., Aspin, T., Azpiroz, I., Bañares, I. & 76 others, Ortiz, J. B., Bodin, C. L., Bonacina, L., Bottarin, R., Cañedo-Argüelles, M., Csabai, Z., Datry, T., de Eyto, E., Dohet, A., Dörflinger, G., Drohan, E., Eikland, K. A., England, J., Eriksen, T. E., Evtimova, V., Feio, M. J., Ferréol, M., Floury, M., Forcellini, M., Forio, M. A. E., Fornaroli, R., Friberg, N., Fruget, J. F., Georgieva, G., Goethals, P., Graça, M. A. S., Graf, W., House, A., Huttunen, K. L., Jensen, T. C., Johnson, R. K., Jones, J. I., Kiesel, J., Kuglerová, L., Larrañaga, A., Leitner, P., L’Hoste, L., Lizée, M. H., Lorenz, A. W., Maire, A., Arnaiz, J. A. M., McKie, B. G., Millán, A., Monteith, D., Muotka, T., Murphy, J. F., Ozolins, D., Paavola, R., Paril, P., Peñas, F. J., Pilotto, F., Polášek, M., Rasmussen, J. J., Rubio, M., Sánchez-Fernández, D., Sandin, L., Schäfer, R. B., Scotti, A., Shen, L. Q., Skuja, A., Stoll, S., Straka, M., Timm, H., Tyufekchieva, V. G., Tziortzis, I., Uzunov, Y., van der Lee, G. H., Vannevel, R., Varadinova, E., Várbíró, G., Velle, G., Verdonschot, P. F. M., Verdonschot, R. C. M., Vidinova, Y., Wiberg-Larsen, P. & Welti, E. A. R., 2023, In: Nature. 620, 7974, p. 582-588 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    A meta-analysis of plant tissue O2 dynamics

    Herzog, Max, Pellegrini, Elisa & Pedersen, Ole, 2023, In: Functional Plant Biology. 50, 7, 13 p.

    Research output: Contribution to journal › Review › Research › peer-review

  26. Published

    Enhancing Flood Tolerance in Wheat (Triticum aestivum) and Rice (Oryza sativa): Identifying Key Physiological Traits

    Herzog, Max, Tong, Shuai, Kjær, Johan Emil, Konnerup, D., Peralta Ogorek, Lucas León, Song, Zhiwei, Pellegrini, Elisa & Pedersen, Ole, 2023. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  27. Published

    Mitigation of Greenhouse Gas Emissions from Rice via Manipulation of Key Root Traits

    Jimenez Serna, Juan de la Cruz & Pedersen, Ole, 2023, In: Rice. 16, 1, 10 p., 24.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Oxygen Depletion in Arctic Lakes: Circumpolar Trends, Biogeochemical Processes, and Implications of Climate Change

    Klanten, Y., Couture, R. M., Christoffersen, Kirsten Seestern, Vincent, W. F. & Antoniades, D., 2023, In: Global Biogeochemical Cycles. 37, 5, 20 p., e2022GB007616.

    Research output: Contribution to journal › Review › Research › peer-review

  29. Published

    Linkages between seagrass tissue O2 dynamics and ecosystem oxidation and feedbacks are revealed using microsensors in situ

    Koch, M., Johnson, C., MacLeod, K., Travis, L., Madden, C. & Pedersen, Ole, 2023, p. 221. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  30. Published

    A quantitative trait locus conferring flood tolerance to deepwater rice regulates the formation of two distinct types of aquatic adventitious roots

    Lin, C., Peralta Ogorek, Lucas León, Liu, D., Pedersen, Ole & Sauter, M., 2023, In: New Phytologist. 238, 4, 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Allometric relationships between leaf and petiole traits across 31 floating-leaved plants reveal a different adaptation pattern from terrestrial plants

    Liu, Y., Liu, H., Båstrup-Spohr, Lars, Li, Z., Li, W., Pan, J. & Cao, Y., 2023, In: Annals of Botany. 131, 3, 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Environmental predictors of lake fish diversity across gradients in lake age and spatial scale

    Martinsen, Kenneth Thorø, Kristensen, E., Båstrup-Spohr, Lars, Søndergaard, M., Carl, Henrik, Jeppesen, E., Sand-Jensen, Kaj & Kragh, T., 2023, In: Freshwater Biology. 68, 7, 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Predicting lake bathymetry from the topography of the surrounding terrain using deep learning

    Martinsen, Kenneth Thorø, Sand-Jensen, Kaj & Selvan, Raghav, 2023, In: Limnology and Oceanography: Methods. 21, 10, p. 625-636

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Flood-tolerant rice for enhanced production and livelihood of smallholder farmers of Africa

    Mwakyusa, L., Dixit, S., Herzog, Max, Heredia, M. C., Madege, R. R. & Kilasi, N. L., 2023, In: Frontiers in Sustainable Food Systems. 7, 13 p., 1244460.

    Research output: Contribution to journal › Review › Research › peer-review

  35. Published

    Screening of potential donors for anaerobic stress tolerance during germination in rice

    Mwakyusa, L., Heredia, M. C., Kilasi, N. L., Madege, R. R., Herzog, Max & Dixit, S., 2023, In: Frontiers in Plant Science. 14, 13 p., 1261101.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Plastic debris in lakes and reservoirs

    Nava, V., Chandra, S., Aherne, J., Alfonso, M. B., Antão-Geraldes, A. M., Attermeyer, K., Bao, R., Bartrons, M., Berger, S. A., Biernaczyk, M., Bissen, R., Brookes, J. D., Brown, D., Cañedo-Argüelles, M., Canle, M., Capelli, C., Carballeira, R., Cereijo, J. L., Chawchai, S., Christensen, S. T. & 59 others, Christoffersen, Kirsten Seestern, de Eyto, E., Delgado, J., Dornan, T. N., Doubek, J. P., Dusaucy, J., Erina, O., Ersoy, Z., Feuchtmayr, H., Frezzotti, M. L., Galafassi, S., Gateuille, D., Gonçalves, V., Grossart, H. P., Hamilton, D. P., Harris, T. D., Kangur, K., Kankılıç, G. B., Kessler, R., Kiel, C., Krynak, E. M., Leiva-Presa, À., Lepori, F., Matias, M. G., Matsuzaki, S. I. S., McElarney, Y., Messyasz, B., Mitchell, M., Mlambo, M. C., Motitsoe, S. N., Nandini, S., Orlandi, V., Owens, C., Özkundakci, D., Pinnow, S., Pociecha, A., Raposeiro, P. M., Rõõm, E. I., Rotta, F., Salmaso, N., Sarma, S. S. S., Sartirana, D., Scordo, F., Sibomana, C., Siewert, D., Stepanowska, K., Tavşanoğlu, Ü. N., Tereshina, M., Thompson, J., Tolotti, M., Valois, A., Verburg, P., Welsh, B., Wesolek, B., Weyhenmeyer, G. A., Wu, N., Zawisza, E., Zink, L. & Leoni, B., 2023, In: Nature. 619, p. 317-322 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Reasons for the dramatic loss of Lobelia dortmanna, a keystone plant species of softwater lakes in the Northern Hemisphere

    Nielsen, S. R., Martinsen, Kenneth Thorø, Pedersen, Ole & Båstrup-Spohr, Lars, 2023, In: Freshwater Biology. 68, 10, p. 1673-1684 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    The barrier to radial oxygen loss protects roots against hydrogen sulphide intrusion and its toxic effect

    Peralta Ogorek, Lucas León, Takahashi, H., Nakazono, M. & Pedersen, Ole, 2023, In: New Phytologist. 238, 5, p. 1825-1837 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Salt-affected soils in Tanzanian agricultural lands: Type of soils and extent of the problem

    Omar, M. M., Shitindi, M. J., Massawe, B. H. J., Fue, K. G., Meliyo, J. L. & Pedersen, Ole, 2023, In: Sustainable Environment. 9, 1, 19 p., 2205731.

    Research output: Contribution to journal › Review › Research › peer-review

  40. Published

    Outer apoplastic barriers in roots: prospects for abiotic stress tolerance

    Peralta Ogorek, Lucas León, Jimenez Serna, Juan de la Cruz, Visser, E. J. W., Takahashi, H., Nakazono, M., Shabala, S. & Pedersen, Ole, 2023, In: Functional Plant Biology. 51, 11 p., FP23133.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    The impacts of the oil palm expansion on freshwater biodiversity and ecosystem functioning: The role of riparian buffers in mitigating stream biodiversity loss

    Rojas, Oscar, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 171 p.

    Research output: Book/Report › Ph.D. thesis › Research

  42. Published

    Drivers and ecology of Ceratium furcoides invasion of a Brazilian subtropical reservoir and its interaction with the phytoplankton community

    Rojas-Castillo, O. A., Pereira, L., Buffon, P. & de Souza Cardoso, L., 2023, In: Limnologica. 101, 13 p., 126080.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Forest buffer-strips mitigate the negative impact of oil palm plantations on stream communities

    Rojas-castillo, O. A., Kepfer Rojas, Sebastian, Vargas, N. & Jacobsen, Dean, 2023, In: Science of the Total Environment. 873, 12 p., 162259.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Vandkraft Versus Vandmiljø: Et opløftende eksempel fra De italienske Alper

    Scotti, A., Bottarin, R. & Jacobsen, Dean, 2023, In: Aktuel Naturvidenskab. 4, p. 38-42 5 p.

    Research output: Contribution to journal › Journal article › Communication

  45. Published

    The quantitative importance of key root traits for radial water loss under low water potential

    Song, Zhiwei, Zonta, F., Peralta Ogorek, Lucas León, Bastegaard, V. K., Herzog, Max, Pellegrini, Elisa & Pedersen, Ole, 2023, In: Plant and Soil. 482, 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Floods stress in lowland rice production: experiences of rice farmers in Kilombero and Lower-Rufiji floodplains, Tanzania

    Sulle Michael, P., Mwakyusa, L., G. Sanga, H., J. Shitindi, M., Kwaslema, D. R., Herzog, Max, L. Meliyo, J. & Massawe, B. H. J., 2023, In: Frontiers in Sustainable Food Systems. 7, 18 p., 1206754.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Uncovering spatiotemporal pattern of floods with Sentinel-1 synthetic aperture radar in major rice-growing river basins of Tanzania

    Sulle Michael, P., G. Sanga, H., J. Shitindi, M., Herzog, Max, L. Meliyo, J. & Massawe, B. H. J., 2023, In: Frontiers in Earth Science. 11, 15 p., 1183834.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Methane and carbon dioxide fluxes at high spatiotemporal resolution from a small temperate lake

    Sø, Jonas Stage, Sand-Jensen, Kaj, Martinsen, Kenneth Thorø, Polauke, E., Kjær, Johan Emil, Reitzel, K. & Kragh, T., 2023, In: Science of the Total Environment. 878, 11 p., 162895.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Nyt udstyr måler tabene af metan og CO2 fra søer

    Sø, Jonas Stage, Sand-Jensen, Kaj, Martinsen, Kenneth Thorø & Kragh, T., 25 May 2023, Videnskab.dk.

    Research output: Other contribution › Net publication - Internet publication › Communication

  50. Published

    Drying of Springs in the Himalayan Region of Nepal: Perspectives of Local Government Leaders on Causes, Consequences, and Conservation Efforts

    Thapa, B., Bhattarai, C., Dahal, N., Tiwari, S. & Jacobsen, Dean, 2023, In: Mountain Research and Development. 43, 4, p. R9-R15 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Can the Wild Perennial, Rhizomatous Rice Species Oryza longistaminata be a Candidate for De Novo Domestication?

    Tong, Shuai, Ashikari, M., Nagai, K. & Pedersen, Ole, 2023, In: Rice. 16, 1, 20 p., 13.

    Research output: Contribution to journal › Review › Research › peer-review

  52. Published

    Responses of key root traits in the genus Oryza to soil flooding mimicked by stagnant, deoxygenated nutrient solution

    Tong, Shuai, Kjær, Johan Emil, Peralta Ogorek, Lucas León, Pellegrini, Elisa, Song, Zhiwei, Pedersen, Ole & Herzog, Max, 2023, In: Journal of Experimental Botany. 74, 6, 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    The resilience journey of rice: Root traits, genome editing and silicon-mediated strategies for enhanced abiotic stress tolerance in rice

    Tong, Shuai, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 139 p.

    Research output: Book/Report › Ph.D. thesis › Research

  54. Published

    Unlocking environmental archives in the Arctic—insights from modern diatom-environment relationships in lakes and ponds across Greenland

    Weckström, K., Weckström, J., Wischnewski, J., Davidson, T. A., Lauridsen, T. L., Landkildehus, F., Christoffersen, Kirsten Seestern & Jeppesen, E., 2023, In: Frontiers in Ecology and Evolution. 11, 15 p., 1177638.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. 2022
  56. Published

    Naturpligt skal sikre mere og vildere natur i Danmark

    Baaner, Lasse, Bruun, Hans Henrik, Vejre, Henrik, Møller, Peter Rask, Båstrup-Spohr, Lars, Krøijer, Stine, Larsen, K. C., Kjøller, Rasmus, Strange, Niels, Jepsen, Martin Rudbeck & Heilmann-Clausen, Jacob, 3 Jun 2022, Altinget.dk.

    Research output: Other contribution › Net publication - Internet publication › Communication

  57. Published

    Stream restoration and ecosystem functioning in lowland streams

    Baattrup-Pedersen, A., Alnoe, A. B., Rasmussen, J. J., Levi, P. S., Friberg, N. & Riis, T., 2022, In: Ecological Engineering. 184, 9 p., 106782.

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. Published

    Urban sprawl facilitates invasions of exotic plants across multiple spatial scales

    Boscutti, F., Lami, F., Pellegrini, Elisa, Buccheri, M., Busato, F., Martini, F., Sibella, R., Sigura, M. & Marini, L., 2022, In: Biological Invasions. 24, 5, p. 1497-1510 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    Ecological correlates of riverine diatom and macroinvertebrate alpha and beta diversity across Arctic Fennoscandia

    Brittain, J. E., Heino, J., Friberg, N., Aroviita, J., Kahlert, M., Karjalainen, S. M., Keck, F., Lento, J., Liljaniemi, P., Mykrä, H., Schneider, S. C. & Ylikörkkö, J., 2022, In: Freshwater Biology. 67, 1, p. 49-63 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    Biologer: Sådan sikrer vi biodiversiteten ved vådlægning af lavbundsjorde

    Bruun, Hans Henrik & Sand-Jensen, Kaj, 8 Mar 2022, In: Altinget.

    Research output: Contribution to journal › Contribution to newspaper - Comment/debate › Communication

  61. Published

    The Pyramiding of Three Key Root Traits Aid Breeding of Flood-Tolerant Rice

    Chen, L., Zhu, T., Peralta Ogorek, Lucas León, Wang, Y., Sauter, M. & Pedersen, Ole, 2022, In: Plants. 11, 15, 10 p., 2033.

    Research output: Contribution to journal › Review › Research › peer-review

  62. Published

    Arctic freshwater biodiversity: Establishing baselines, trends, and drivers of ecological change

    Culp, J. M., Goedkoop, W., Christensen, T., Christoffersen, Kirsten Seestern, Fefilova, E., Liljaniemi, P., Novichkova, A. A., Ólafsson, J. S., Sandøy, S., Zimmerman, C. E. & Lento, J., 2022, In: Freshwater Biology. 67, 1, p. 1-13 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Effects of pollution-induced changes in oxygen conditions scaling up from individuals to ecosystems in a tropical river network

    Eriksen, T. E., Jacobsen, Dean, Demars, B. O. L., Brittain, J. E., Søli, G. & Friberg, N., 2022, In: Science of the Total Environment. 814, 11 p., 151958.

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    A Bayesian Belief Network learning tool integrates multi-scale effects of riparian buffers on stream invertebrates

    Forio, M. A. E., Burdon, F. J., De Troyer, N., Lock, K., Witing, F., Baert, L., De Saeyer, N., Risnoveanu, G., Popescu, C., Kupilas, B., Friberg, N., Boets, P., Johnson, R. K., Volk, M., McKie, Brendan Gerard & Goethals, P. L. M., 2022, In: Science of the Total Environment. 810, 11 p., 152146.

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    Improving the framework for assessment of ecological change in the Arctic: A circumpolar synthesis of freshwater biodiversity

    Goedkoop, W., Culp, J. M., Christensen, T., Christoffersen, Kirsten Seestern, Fefilova, E., Guðbergsson, G., Lárusson, K. F., Liljaniemi, P., Novichkova, A. A., Ólafsson, J. S., Sandøy, S. & Lento, J., 2022, In: Freshwater Biology. 67, 1, p. 210-223 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    Distance decay 2.0 – A global synthesis of taxonomic and functional turnover in ecological communities

    Graco-Roza, C., Aarnio, S., Abrego, N., Acosta, A. T. R., Alahuhta, J., Altman, J., Angiolini, C., Aroviita, J., Attorre, F., Baastrup-Spohr, L., Barrera-Alba, J. J., Belmaker, J., Biurrun, I., Bonari, G., Bruelheide, H., Burrascano, S., Carboni, M., Cardoso, P., Carvalho, J. C., Castaldelli, G. & 72 others, Christensen, M., Correa, G., Dembicz, I., Dengler, J., Dolezal, J., Domingos, P., Erös, T., Ferreira, C. E. L., Filibeck, G., Floeter, S. R., Friedlander, A. M., Gammal, J., Gavioli, A., Gossner, M. M., Granot, I., Guarino, R., Gustafsson, C., Hayden, B., He, S., Heilmann-Clausen, Jacob, Heino, J., Hunter, J. T., Huszar, V. L. M., Janišová, M., Jyrkänkallio-Mikkola, J., Kahilainen, K. K., Kemppinen, J., Kozub, Ł., Kruk, C., Kulbiki, M., Kuzemko, A., Christiaan le Roux, P., Lehikoinen, A., Teixeira de Lima, D., Lopez-Urrutia, A., Lukács, B. A., Luoto, M., Mammola, S., Marinho, M. M., Menezes, L. S., Milardi, M., Miranda, M., Moser, G. A. O., Mueller, J., Niittynen, P., Norkko, A., Nowak, A., Ometto, J. P., Ovaskainen, O., Overbeck, G. E., Pacheco, F. S., Pajunen, V., Palpurina, S., Picazo, F., Campos, J. A., Rodil, I. F., Sabatini, F. M., Salingré, S., De Sanctis, M., Segura, A. M., da Silva, L. H. S., Stevanovic, Z. D., Swacha, G., Teittinen, A., Tolonen, K. T., Tsiripidis, I., Virta, L., Wang, B., Wang, J., Weisser, W., Xu, Y. & Soininen, J., 2022, In: Global Ecology and Biogeography. 31, 7, p. 1399-1421 23 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    Biodiversity patterns of Arctic diatom assemblages in lakes and streams: Current reference conditions and historical context for biomonitoring

    Kahlert, M., Rühland, K. M., Lavoie, I., Keck, F., Saulnier-Talbot, E., Bogan, D., Brua, R. B., Campeau, S., Christoffersen, Kirsten Seestern, Culp, J. M., Karjalainen, S. M., Lento, J., Schneider, S. C., Shaftel, R. & Smol, J. P., 2022, In: Freshwater Biology. 67, 1, p. 116-140 25 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Published

    Anthropogenically impacted lake catchments in Denmark reveal low microplastic pollution

    Kallenbach, E. M. F., Friberg, N., Lusher, A., Jacobsen, Dean & Hurley, R. R., 2022, In: Environmental Science and Pollution Research. 29, 31, p. 47726-47739 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  69. Published

    Plastic recycling plant as a point source of microplastics to sediment and macroinvertebrates in a remote stream

    Kallenbach, E. M. F., Eriksen, T. E., Hurley, R. R., Jacobsen, Dean, Singdahl-Larsen, C. & Friberg, N., 2022, In: Microplastics and Nanoplastics. 2, 15 p., 26.

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    Microplastic In Freshwater Macroinvertebrates

    Kallenbach, E. M. F., 2022, Department of Biology, Faculty of Science, University of Copenhagen. 203 p.

    Research output: Book/Report › Ph.D. thesis › Research

  71. Published

    Hypersalinity effects on O2 flux across the diffusive boundary layer of leaves in the tropical seagrass Thalassia testudinum

    Koch, M. S., Johnson, C. R., Travis, L., Pedersen, Ole & Madden, C. J., 2022, In: Journal of Experimental Marine Biology and Ecology. 555, 8 p., 151780.

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    Irradiance, Water Column O2, and Tide Drive Internal O2 Dynamics and Meristem H2S Detection in the Dominant Caribbean-Tropical Atlantic Seagrass, Thalassia testudinum

    Koch, M. S., Johnson, C. R., Madden, C. J. & Pedersen, Ole, 2022, In: Estuaries and Coasts. 45, 8, p. 2543-2559 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    Low irradiance disrupts the internal O2 dynamics of seagrass (Thalassia testudinum) leading to shoot meristem H2S intrusion

    Koch, M. S., Johnson, C. R., Madden, C. J. & Pedersen, Ole, 2022, In: Aquatic Botany. 181, 11 p., 103532.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    Linkages between seagrass tissue O2 dynamics and ecosystem oxidation and feedbacks revealed using microsensors in situ

    Koch, M., Johnson, C., MacLeod, K., Travis, L., Madden, C. & Pedersen, Ole, 2022, p. 22. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  75. Published

    Multiple stressors linked to internal O2 imbalance contribute to seagrass die-off in a subtropical lagoon: Resilience with steep cliffs and cascading consequences

    Koch, M., Johnson, C., MacLeod, K., Travis, L., Madden, C. & Pedersen, Ole, 2022.

    Research output: Contribution to conference › Poster › Research › peer-review

  76. Published

    External Phosphorus Loading in New Lakes

    Kragh, T., Kolath, T., Kolath, A. S., Reitzel, K., Martinsen, Kenneth Thorø, Søndergaard, M., Hoffmann, C. C., Båstrup-Spohr, Lars & Egemose, S., 2022, In: Water. 14, 7, 21 p., 1008.

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    Removal of chromophoric dissolved organic matter under combined photochemical and microbial degradation as a response to different irradiation intensities

    Kragh, T., Sand-Jensen, Kaj, Kristensen, E., Pedersen, Ole & Madsen-Østerbye, M., 2022, In: Journal of Environmental Sciences. 118, p. 76-86

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    Circumpolar patterns of Arctic freshwater fish biodiversity: A baseline for monitoring

    Laske, S. M., Amundsen, P., Christoffersen, Kirsten Seestern, Erkinaro, J., Guðbergsson, G., Hayden, B., Heino, J., Holmgren, K., Kahilainen, K. K., Lento, J., Orell, P., Östergren, J., Power, M., Rafikov, R., Romakkaniemi, A., Svenning, M., Swanson, H., Whitman, M. & Zimmerman, C. E., 2022, In: Freshwater Biology. 67, 1, p. 176-193 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Published

    Multitrophic biodiversity patterns and environmental descriptors of sub‐Arctic lakes in northern Europe

    Lau, D. C. P., Christoffersen, Kirsten Seestern, Erkinaro, J., Hayden, B., Heino, J., Hellsten, S., Holmgren, K., Kahilainen, K. K., Kahlert, M., Karjalainen, S. M., Karlsson, J., Forsström, L., Lento, J., Mjelde, M., Ruuhijärvi, J., Sandøy, S., Schartau, A. K., Svenning, M., Vrede, T. & Goedkoop, W., 2022, In: Freshwater Biology. 67, 1, p. 30-48 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    Temperature and spatial connectivity drive patterns in freshwater macroinvertebrate diversity across the Arctic

    Lento, J., Culp, J. M., Levenstein, B., Aroviita, J., Baturina, M. A., Bogan, D., Brittain, J. E., Chin, K., Christoffersen, K. S., Docherty, C., Friberg, N., Ingimarsson, F., Jacobsen, D., Lau, D. C. P., Loskutova, O. A., Milner, A., Mykrä, H., Novichkova, A. A., Ólafsson, J. S., Schartau, A. K. & 2 others, Shaftel, R. & Goedkoop, W., 2022, In: Freshwater Biology. 67, 1, p. 159-175 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    CO2 i Skandinaviens vandløb analyseret med maskinlæring

    Martinsen, Kenneth Thorø & Sand-Jensen, Kaj, 2022, In: Vand & Jord. 5, p. 207-210

    Research output: Contribution to journal › Journal article › Communication

  82. Published

    Ecosystem Metabolism and Gradients of Temperature, Oxygen and Dissolved Inorganic Carbon in the Littoral Zone of a Macrophyte-Dominated Lake

    Martinsen, Kenneth Thorø, Zak, N. B., Båstrup-Spohr, Lars, Kragh, T. & Sand-Jensen, Kaj, 2022, In: Journal of Geophysical Research: Biogeosciences. 127, 12, 15 p., e2022JG007193.

    Research output: Contribution to journal › Journal article › Research › peer-review

  83. Published

    Predicting water quality from geospatial lake, catchment, and buffer zone characteristics in temperate lowland lakes

    Martinsen, Kenneth Thorø & Sand-Jensen, Kaj, 2022, In: Science of the Total Environment. 851, 12 p., 158090.

    Research output: Contribution to journal › Journal article › Research › peer-review

  84. Published

    Wind drives fast changes of light climate in a large, shallow re-established lake

    Martinsen, Kenneth Thorø, Kragh, T., Sand-Jensen, Kaj, Madsen-Østerbye, M., Kristensen, E. & Sø, Jonas Stage, 2022, In: Science of the Total Environment. 806, 3, 11 p., 151354.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    Systematic position of the Clicking Frog (Kassinula Laurent, 1940), the problem of chimeric sequences and the revised classification of the family Hyperoliidae

    Nečas, T., Kielgast, J., Nagy, Z. T., Kusamba Chifundera, Z. & Gvoždík, V., 2022, In: Molecular Phylogenetics and Evolution. 174, 11 p., 107514.

    Research output: Contribution to journal › Journal article › Research › peer-review

  86. Published

    Exploring farmers’ perception, knowledge, and management techniques of salt-affected soils to enhance rice production on small land holdings in Tanzania

    Omar, M. M., Shitindi, M. J., Massawe, B. H. J., Fue, K. G., Pedersen, Ole & Meliyo, J. L., 2022, In: Cogent Food and Agriculture. 8, 1, 20 p., 2140470.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    Leading trait dimensions in flood-tolerant plants

    Pan, Y., Cieraad, E., Armstrong, J., Armstrong, W., Clarkson, B. R., Pedersen, Ole, Visser, E. J. W., Voesenek, L. A. C. J. & van Bodegom, P. M., 2022, In: Annals of Botany. 130, 3, p. 383-392 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    Why green leaves sometimes turn reddish: An eyewitness report from InterZoo 2022

    Pedersen, Ole, Floytrup, A. H. & Andersen, T., 2022, In: The Aquatic Gardener. 35, 3, p. 10-17

    Research output: Contribution to journal › Journal article › Research

  89. Published

    Flooding and Soil Properties Control Plant Intra- and Interspecific Interactions in Salt Marshes

    Pellegrini, Elisa, Incerti, G., Pedersen, Ole, Moro, N., Foscari, A., Casolo, V., Contin, M. & Boscutti, F., 2022, In: Plants. 11, 15, 17 p., 1940.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Roots in armour: Protective traits of the barrier to radial oxygen loss

    Peralta Ogorek, Lucas León, 2022, Department of Biology, Faculty of Science, University of Copenhagen. 193 p.

    Research output: Book/Report › Ph.D. thesis › Research

  91. Published

    The barrier to radial oxygen loss prevents H2S intrusion and its toxic effect

    Peralta Ogorek, Lucas León, Takahashi, H., Nakazono, M. & Pedersen, Ole, 2022, p. 15.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  92. Published

    The root barrier to radial oxygen loss: a jack of all trades

    Peralta Ogorek, Lucas León, Tong, Shuai, Kjær, Johan Emil, Song, Zhiwei, Bastegaard, V. K., Zonta, F., Yamauchi, T., de la Cruz Jiménez, J., Takahashi, H., Nakazono, M., Herzog, Max, Pellegrini, Elisa & Pedersen, Ole, 2022, p. 14.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  93. Published

    Oliepalmer: En stigende trussel mod tropernes biodiversitet og ferskvande?

    Rojas, Oscar, Kepfer Rojas, Sebastian & Jacobsen, Dean, 2022, In: Aktuel Naturvidenskab. 2022, 3, p. 32-36

    Research output: Contribution to journal › Journal article › Communication

  94. Published

    Danmarks Biodiversitet: før, nu og I morgen

    Sand-Jensen, Kaj & Schou, J. C., 2022, 1 ed. København: Gad. 240 p.

    Research output: Book/Report › Book › Communication

  95. Published

    Intelligente computersystemer i økologien

    Sand-Jensen, Kaj, Martinsen, Kenneth Thorø & Kragh, T., 2022, In: Aktuel Naturvidenskab. 5, p. 16-19

    Research output: Contribution to journal › Journal article › Communication

  96. Published

    Photosynthesis, growth, and distribution of plants in lowland streams — A synthesis and new data analyses of 40 years research

    Sand-Jensen, Kaj, Riis, T. & Martinsen, Kenneth Thorø, 2022, In: Freshwater Biology. 67, 7, p. 1255-1271 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    Physiological Adaptation and Plant Distribution along a Steep Hydrological Gradient

    Sand-Jensen, Kaj, Borum, Jens, Møller, C. L. & Båstrup-Spohr, Lars, 2022, In: Plants. 11, 13, 12 p., 1683.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Stream-Lake Connectivity Is an Important Control of Fluvial CO2 Concentrations and Emissions in Catchments

    Sand-Jensen, Kaj, Riis, T., Kjær, Johan Emil & Martinsen, Kenneth Thorø, 2022, In: Earth and Space Science. 9, 12, 12 p., e2022EA002664.

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Vandløbenes CO2-overmætning og biodiversitet

    Sand-Jensen, Kaj, Martinsen, Kenneth Thorø, Kjær, Johan Emil, Sø, Jonas Stage, Baumane, Marta, Kragh, T., Båstrup-Spohr, Lars, Bruun, Hans Henrik & Riis, T., 2022, In: Vand & Jord. 2, p. 44-48

    Research output: Contribution to journal › Journal article › Communication

  100. Published

    First circumpolar assessment of Arctic freshwater phytoplankton and zooplankton diversity: Spatial patterns and environmental factors

    Schartau, A. K., Mariash, H. L., Christoffersen, Kirsten Seestern, Bogan, D., Dubovskaya, O. P., Fefilova, E. B., Hayden, B., Ingvason, H. R., Ivanova, E. A., Kononova, O. N., Kravchuk, E. S., Lento, J., Majaneva, M., Novichkova, A. A., Rautio, M., Rühland, K. M., Shaftel, R., Smol, J. P., Vrede, T. & Kahilainen, K. K., 2022, In: Freshwater Biology. 67, 1, p. 141-158 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  101. Published

    Scientists' warning of threats to mountains

    Schmeller, D. S., Urbach, D., Bates, K., Catalan, J., Cogălniceanu, D., Fisher, M. C., Friesen, J., Füreder, L., Gaube, V., Haver, M., Jacobsen, D., Le Roux, G., Lin, Y-P., Loyau, A., Machate, O., Mayer, A., Palomo, I., Plutzar, C., Sentenac, H., Sommaruga, R. & 2 others, Tiberti, R. & Ripple, W. J., 2022, In: The Science of the Total Environment. 853, 12 p., 158611.

    Research output: Contribution to journal › Review › Research › peer-review

  102. Published

    Small Hydropower — Small Ecological Footprint? A Multi-Annual Environmental Impact Analysis Using Aquatic Macroinvertebrates as Bioindicators: Part 1: Effects on Community Structure

    Scotti, A., Jacobsen, Dean, Ștefan, V., Tappeiner, U. & Bottarin, R., 2022, In: Frontiers in Environmental Science. 10, 13 p., 902603.

    Research output: Contribution to journal › Journal article › Research › peer-review

  103. Published

    Small hydropower — Small ecological footprint? A multi-annual environmental impact analysis using aquatic macroinvertebrates as bioindicators: Part 2: Effects on functional diversity

    Scotti, A., Jacobsen, Dean & Bottarin, R., 2022, In: Frontiers in Environmental Science. 10, 14 p., 904547.

    Research output: Contribution to journal › Journal article › Research › peer-review

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