Department of Biology

Organisation profile

 

 
  1. 2021
  2. Published

    Commercially available kelp and seaweed products – valuable iodine source or risk of excess intake?

    Aakre, I., Solli, D. D., Markhus, M. W., Mæhre, H. K., Dahl, L., Henjum, S., Alexander, J., Korneliussen, P., Madsen, L. & Kjellevold, M., 2021, In: Food & Nutrition Research. 65, 17 p., 7584.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Molekylære stavefejl

    Abildgaard, Amanda Bering, Winther, Jakob R., Lindorff-Larsen, Kresten & Hartmann-Petersen, Rasmus, 28 Jan 2021, In: Weekendavisen, Ideer.

    Research output: Contribution to journalContribution to newspaper - Feature articleCommunication

  4. Published

    VM i molekylære puslespil

    Abildgaard, Amanda Bering, Winther, Jakob R., Lindorff-Larsen, Kresten & Hartmann-Petersen, Rasmus, 16 Apr 2021, In: Weekendavisen: Ideer. 15, p. 11

    Research output: Contribution to journalContribution to newspaper - Feature articleCommunication

  5. Published

    COVID-19 drug practices risk antimicrobial resistance evolution

    MetaSUB Consortium, M. C., 2021, In: The Lancet Microbe. 2, 4, p. e135-e136

    Research output: Contribution to journalComment/debateResearchpeer-review

  6. Published

    Refinement of α-Synuclein Ensembles Against SAXS Data: Comparison of Force Fields and Methods

    Ahmed, M. C., Skaanning, L. K., Jussupow, A., Newcombe, Estella Anne, Kragelund, Birthe Brandt, Camilloni, C., Langkilde, Annette Eva & Lindorff-Larsen, Kresten, 2021, In: Frontiers in Molecular Biosciences. 8, 13 p., 654333.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Macroecology of macrophytes in the freshwater realm: Patterns, mechanisms and implications

    Alahuhta, J., Lindholm, M., Båstrup-Spohr, Lars, García-Girón, J., Toivanen, M., Heino, J. & Murphy, K., 2021, In: Aquatic Botany. 168, 10 p., 103325.

    Research output: Contribution to journalReviewResearchpeer-review

  8. Submitted

    A Novel and Direct Metamobilome Approach improves the Detection of Larger-sized Circular Elements across Kingdoms

    Alanin, K. S., Jørgensen, T. S., Browne, P., Petersen, Bent, Riber, Leise, Kot, Witold & Hansen, Lars Hestbjerg, 2021, (Submitted) In: bioRxiv. 761098.

    Research output: Contribution to journalJournal articleResearch

  9. Published

    An improved direct metamobilome approach increases the detection of larger-sized circular elements across kingdoms

    Alanin, Katrine Wacenius Skov, Jørgensen, T. S., Browne, P. D., Petersen, Bent, Riber, Leise, Kot, Witold & Hansen, Lars Hestbjerg, 2021, In: Plasmid. 115, 11 p., 102576.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Calmodulin downregulation in conditional knockout HeLa cells inhibits cell migration

    Alcalde, J., Munk, M., González-Muñoz, M., Panina, S., Berchtold, Martin Werner & Villalobo, A., 2021, In: Archives of Biochemistry and Biophysics. 697, 9 p., 108680.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Divergent expression of hypoxia response systems under deoxygenation in reef-forming corals aligns with bleaching susceptibility

    Alderdice, R., Suggett, D. J., Cárdenas, A., Hughes, D. J., Kühl, Michael, Pernice, M. & Voolstra, C. R., 2021, In: Global Change Biology. 27, 2, p. 312-326 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Limits to the cellular control of sequestered cryptophyte prey in the marine ciliate Mesodinium rubrum

    Altenburger, A., Cai, H., Li, Q., Drumm, K., Kim, M., Zhu, Y., Garcia-Cuetos, L., Zhan, X., Hansen, Per Juel, John, U., Li, S. & Lundholm, Nina, 2021, In: The ISME Journal. 15, 4, p. 1056-1072 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Indirect effects of climate change inhibit N2 fixation associated with the feathermoss Hylocomium splendens in subarctic tundra

    Alvarenga, Danillo Oliveira & Rousk, Kathrin, 1 Nov 2021, In: Science of the Total Environment. 795, p. 148676

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Amazonocrinis nigriterrae gen. nov., sp. nov., Atlanticothrix silvestris gen. nov., sp. nov. and Dendronalium phyllosphericum gen. nov., sp. nov., nostocacean cyanobacteria from Brazilian environments

    Alvarenga, Danillo Oliveira, Andreote, A. P. D., Branco, L. H. Z., Delbaje, E., Cruz, R. B., Varani, A. D. M. & Fiore, M. F., 2021, In: International Journal of Systematic and Evolutionary Microbiology. 71, 5, 12 p., 004811.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Systems-wide effects of short-term feed deprivation in obese mice

    Andersen, D., Roager, Henrik Munch, Zhang, L., Moll, J. M., Frandsen, H. L., Danneskiold-Samsøe, N. B., Hansen, Axel Kornerup, Kristiansen, Karsten, Licht, T. R. & Brix, Susanne, 2021, In: Scientific Reports. 11, 11 p., 5716.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Molecular parallelisms between pigmentation in the avian iris and the integument of ectothermic vertebrates

    Andrade, P., Gazda, M. A., Araújo, P. M., Afonso, S., Rasmussen, Jacob Agerbo, Marques, C. I., Lopes, R. J., Gilbert, M Thomas P & Carneiro, M., 2021, In: PLOS Genetics. 17, 2, 16 p., 1009404.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Multiple origins of a frameshift insertion in a mitochondrial gene in birds and turtles

    Andreu-Sánchez, S., Chen, W., Stiller, Josefin & Zhang, Guojie, 2021, In: GigaScience. 10, 1, 11 p., giaa161.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Polyketide synthase genes and molecular trade-offs in the ichthyotoxic species Prymnesium parvum

    Anestis, K., Kohli, G. S., Wohlrab, S., Varga, E., Larsen, T. O., Hansen, Per Juel & John, U., 9 Jul 2021, In: Science of the Total Environment. 795, 10 p., 148878.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Substitutional landscape of a split fluorescent protein fragment using high-density peptide microarrays

    Antonescu, O. N., Rasmussen, A., Damm, N. A. M., Heidemann, Ditte Fogh, Popov, R., Nesterov-Mueller, A., Johansson, Kristoffer Enøe & Winther, Jakob R., 2021, In: PLoS ONE. 16, 2, 17 p., e0241461.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    Metabolomics unveils the influence of dietary phytochemicals on residual pesticide concentrations in honey bees

    Ardalani, H., Vidkjær, Nanna Hjort, Kryger, P., Fiehn, O. & Fomsgaard, I. S., 2021, In: Environment International. 152, 10 p., 106503.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Small Intestinal Tuft Cell Activity Associates With Energy Metabolism in Diet-Induced Obesity

    Arora, P., Andersen, D., Moll, J. M., Danneskiold-Samsøe, N. B., Xu, L., Zhou, B., Kladis, G., Rausch, Philipp, Workman, C. T., Kristiansen, Karsten & Brix, S., 2021, In: Frontiers in Immunology. 12, 13 p., 629391.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Juvenile hormone pathway in honey bee larvae: A source of possible signal molecules for the reproductive behavior of Varroa destructor

    Aurori, C. M., Giurgiu, A. I., Schantz-Conlon, Benjamin, Kastally, C., Dezmirean, D. S., Routtu, J. & Aurori, A., 2021, In: Ecology and Evolution. 11, 2, p. 1057-1068 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Mercury bioaccumulation pathways in tusk (Brosme brosme) from Sognefjord, Norway: Insights from C and N isotopes

    Azad, A. M., Frantzen, S., Bank, M. S., Madsen, L. & Maage, A., 2021, In: Environmental Pollution. 269, 10 p., 115997.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Distinct rhizomicrobiota assemblages and plant performance in lettuce grown in soils with different agricultural management histories

    Babin, D., Sommermann, L., Chowdhury, S. P., Behr, J. H., Sandmann, M., Neumann, G., Nesme, J., Sørensen, Søren Johannes, Schellenberg, I., Rothballer, M., Geistlinger, J., Smalla, K. & Grosch, R., 2021, In: FEMS Microbiology Ecology. 97, 4, 21 p., fiab027.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Functions of TopBP1 in preserving genome integrity during mitosis

    Bagge, Jonas, Østergaard, Vibe Hallundbæk & Lisby, Michael, 2021, In: Seminars in Cell and Developmental Biology. 113, p. 57-64 8 p.

    Research output: Contribution to journalReviewResearchpeer-review

  26. Published

    Phenological stage of tundra vegetation controls bidirectional exchange of BVOCs in a climate change experiment on a subarctic heath

    Baggesen, Nanna Schrøder, Li, Tao, Seco, Roger, Holst, T., Michelsen, Anders & Rinnan, Riikka, 2021, In: Global Change Biology. 27, 12, p. 2928-2944 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    Root exposure to apple replant disease soil triggers local defense response and rhizoplane microbiome dysbiosis

    Balbín-Suárez, A., Jacquiod, S., Rohr, A. D., Liu, B., Flachowsky, H., Winkelmann, T., Beerhues, L., Nesme, J., Sørensen, Søren Johannes, Vetterlein, D. & Smalla, K., 2021, In: FEMS Microbiology Ecology. 97, 4, 14 p., fiab031.

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. Published

    Monsters in the dark: systematics and biogeography of the stygobitic genus Godzillius (Crustacea: Remipedia) from the Lucayan Archipelago

    Ballou, L., Iliffe, T. M., Kakuk, B., Gonzalez, B. C., Osborn, K. J., Worsaae, Katrine, Meland, K., Broad, K., Bracken-Grissom, H. & Olesen, Jørgen, 2021, In: European Journal of Taxonomy. 751, p. 115-139 25 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Published

    Application of wood ash leads to strong vertical gradients in soil pH changing prokaryotic community structure in forest top soil

    Bang-Andreasen, T., Peltre, M., Ellegaard-Jensen, L., Hansen, Lars Hestbjerg, Ingerslev, Morten, Rønn, Regin, Jacobsen, C. S. & Kjøller, Rasmus, 2021, In: Scientific Reports. 11, 10 p., 742.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    Overproduction of Human Zip (SLC39) Zinc Transporters in Saccharomyces cerevisiae for Biophysical Characterization

    Becares, E. R., Pedersen, Per Amstrup, Gourdon, Pontus Emanuel & Gotfryd, Kamil, 2021, In: Cells. 10, 2, 21 p., 213.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    The germline mutational process in rhesus macaque and its implications for phylogenetic dating

    Bergeron, L. A., Besenbacher, S., Bakker, J., Zheng, J., Li, P., Pacheco, G., Sinding, Mikkel Holger Strander, Kamilari, M., Gilbert, M Thomas P, Schierup, M. H. & Zhang, Guojie, 2021, In: GigaScience. 10, 5, 14 p., giab029.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    Pedigree-based estimation of germline mutation rates in vertebrates and the evolutionary implication

    Bergeron, L. A., 2021, Department of Biology, Faculty of Science, University of Copenhagen. 341 p.

    Research output: Book/ReportPh.D. thesisResearch

  33. Published

    Optimizing fish growth and animal welfare in aquaculture sea cages by profiling oxygen and water current

    Bergsson, H., 2021, Department of Biology, Faculty of Science, University of Copenhagen. 124 p.

    Research output: Book/ReportPh.D. thesisResearch

  34. Published

    Importance of microbial communities at the root-soil interface for extracellular polymeric substances and soil aggregation in semiarid grasslands

    Bettermann, A., Zethof, J. H. T., Babin, D., Cammeraat, E. L. H., Solé-Benet, A., Lázaro, R., Luna, L., Nesme, J., Sørensen, Søren Johannes, Kalbitz, K., Smalla, K. & Vogel, C., 2021, In: Soil Biology & Biochemistry. 159, 14 p., 108301.

    Research output: Contribution to journalJournal articleResearchpeer-review

  35. Published

    Ancestral developmental potentials in early bony fish contributed to vertebrate water-to-land transition

    Bi, X. & Zhang, Guojie, 2021, In: Zoological research. 42, 2, p. 135-137 3 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published

    Tracing the genetic footprints of vertebrate landing in non-teleost ray-finned fishes

    Bi, X., Wang, K., Yang, L., Pan, H., Jiang, H., Wei, Q., Fang, M., Yu, H., Zhu, C., Cai, Y., He, Y., Gan, X., Zeng, H., Yu, D., Zhu, Y., Jiang, H., Qiu, Q., Yang, H., Zhang, Y. E., Wang, W., Zhu, M., He, S. & Zhang, Guojie, 2021, In: Cell. 184, 5, p. 1377-1391, e1-e14

    Research output: Contribution to journalJournal articleResearchpeer-review

  37. Published

    Binding Sites for Oligosaccharide Repeats from Lactic Acid Bacteria Exopolysaccharides on Bovine β-Lactoglobulin Identified by NMR Spectroscopy

    Birch, J., Khan, S., Madsen, M., Kjeldsen, C., Møller, M. S., Stender, E. G. P., Peters, G. H. J., Duus, J. Ø., Kragelund, Birthe Brandt & Svensson, B., 2021, In: ACS Omega. 6, 13, p. 9039-9052 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. E-pub ahead of print

    The endangered White Sands pupfish (Cyprinodon tularosa) genome reveals low diversity and heterogenous patterns of differentiation

    Black, A. N., Willoughby, J. R., Brüniche-Olsen, Anna, Pierce, B. L. & DeWoody, J. A., 1 Jul 2021, (E-pub ahead of print) In: Molecular Ecology Resources. 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    The loss of mixotrophy in Alexandrium pseudogonyaulax: Implications for trade-offs between toxicity, mucus trap production, and phagotrophy

    Blossom, H. E. & Hansen, Per Juel, 2021, In: Limnology and Oceanography. 66, 2, p. 528-542 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Accepted/In press

    Don’t drink it, bury it: comparing decomposition rates with the tea bag index is possible without prior leaching

    Blume-Werry, G., Di Maurizio, V., Beil, I., Lett, Signe, Schwieger, S. & Kreyling, J., 2021, (Accepted/In press) In: Plant and Soil. 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Species-specific but not phylosymbiotic gut microbiomes of New Guinean passerine birds are shaped by diet and flight-associated gut modifications

    Bodawatta, K. H., Koane, B., Maiah, G., Sam, K., Poulsen, Michael & Jønsson, Knud Andreas, 2021, In: Proceedings of the Royal Society B: Biological Sciences. 288, 1949, 10 p., 20210446.

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    Using the 2020 global pandemic as a springboard to highlight the need for amphibian conservation in eastern Asia

    Borzée, A., Kielgast, Jos, Wren, S., Angulo, A., Chen, S., Magellan, K., Messenger, K. R., Hansen-Hendrikx, C. M., Baker, A., Santos, M. M. D., Kusrini, M., Jiang, J., Maslova, I. V., Das, I., Park, D., Bickford, D., Murphy, R. W., Che, J., Van Do, T., Nguyen, T. Q., Chuang, M. & Bishop, P. J., 2021, In: Biological Conservation. 255, 10 p., 108973.

    Research output: Contribution to journalReviewResearchpeer-review

  43. Published

    Conformational Ensembles of Noncoding Elements in the SARS-CoV-2 Genome from Molecular Dynamics Simulations

    Bottaro, Sandro, Bussi, G. & Lindorff-Larsen, Kresten, 2021, In: Journal of the American Chemical Society. 143, 22, p. 8333-8343

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    Salmon gut microbiota correlates with disease infection status: potential for monitoring health in farmed animals

    Bozzi, D., Rasmussen, Jacob Agerbo, Carøe, Christian, Sveier, H., Nordøy, K., Gilbert, M Thomas P & Limborg, Morten Tønsberg, 2021, In: BMC Animal Microbiome. 3, 17 p., 30.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published

    Parathyroid hormone receptor stimulation induces human adipocyte lipolysis and browning

    Breining, P., Pedersen, S. B., Kjolby, M., Hansen, Jacob B., Jessen, N. & Richelsen, B., 2021, In: European Journal of Endocrinology. 184, 5, p. 687-697 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    Museskridt eller tigerspring?

    Bruun, Hans Henrik, 2021, In: moMentum+. 19, 1, p. 28-31 4 p.

    Research output: Contribution to journalJournal articleCommunication

  47. Published

    αα-Hub domains and intrinsically disordered proteins: a decisive combo

    Bugge, Katrine, Staby, L., Salladini, E., Falbe-Hansen, Rasmus Greve, Kragelund, Birthe Brandt & Skriver, Karen, 2021, In: Journal of Biological Chemistry. 296, 18 p., 100226.

    Research output: Contribution to journalReviewResearchpeer-review

  48. Published

    Tillage shapes the soil and rhizosphere microbiome of barley - but not its susceptibility towards Blumeria graminis f. sp. hordei

    Bziuk, N., Maccario, Lorrie, Douchkov, D., Lueck, S., Babin, D., Sørensen, Søren Johannes, Schikora, A. & Smalla, K., 2021, In: FEMS Microbiology Ecology. 97, 3, 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. E-pub ahead of print

    Genome-informed approach to identify genetic determinants of Flavobacterium psychrophilum phage susceptibility

    Castillo, D., Jørgensen, Jóhanna, Sundell, K., Madsen, L., Dalsgaard, I., Wiklund, T. & Middelboe, Mathias, 14 May 2021, (E-pub ahead of print) In: Environmental Microbiology. 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published

    Reduced tillage, cover crops and organic amendments affect soil microbiota and improve soil health in Uruguayan vegetable farming systems

    Cerecetto, V., Smalla, K., Nesme, J., Garaycochea, S., Fresia, P., Sørensen, Søren Johannes, Babin, D. & Leoni, C., 2021, In: FEMS Microbiology Ecology. 97, 3, 14 p., fiab023.

    Research output: Contribution to journalJournal articleResearchpeer-review

  51. Published

    Quantifying nitrogen fixation by heterotrophic bacteria in sinking marine particles

    Chakraborty, S., Andersen, K. H., Visser, A. W., Inomura, K., Follows, M. J. & Riemann, Lasse, 2021, In: Nature Communications. p. 1-14 12:4085.

    Research output: Contribution to journalJournal articleResearchpeer-review

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