Department of Biology

 

 
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  1. 2023
  2. Published

    Linkages between seagrass tissue O2 dynamics and ecosystem oxidation and feedbacks are revealed using microsensors in situ

    Koch, M., Johnson, C., MacLeod, K., Travis, L., Madden, C. & Pedersen, Ole, 2023, p. 221. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  3. Published

    Confusion will be my epitaph: genome-scale discordance stifles phylogenetic resolution of Holothuroidea

    Koch, N. M., Tilic, E., Miller, A. K., Stiller, Josefin & Rouse, G. W., 2023, In: Proceedings of the Royal Society B: Biological Sciences. 290, 2002, 11 p., 20230988.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Genetics as a novel tool in mining impact assessment and biomonitoring of critically endangered western chimpanzees in the Nimba Mountains, Guinea

    Koops, K., Humle, T., Frandsen, P., Fitzgerald, M., D'Auvergne, L., Jackson, H. A., Børsting, Claus, Siegismund, Hans Redlef, Soumah, A. G. & Hvilsom, C., 2023, In: Conservation Science and Practice. 5, 4, 17 p., e12898.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Close coupling of plant functional types with soil microbial community composition drives soil carbon and nutrient cycling in tundra heath

    Koranda, M., Rinnan, Riikka & Michelsen, Anders, 2023, In: Plant and Soil. 488, p. 551-572 22 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Monomeric α-synuclein activates the plasma membrane calcium pump

    Kowalski, A., Betzer, C., Larsen, S. T., Gregersen, E., Newcombe, Estella Anne, Bermejo, M. C., Bendtsen, V. W., Diemer, J., Ernstsen, C. V., Jain, S., Bou, A. E., Langkilde, Annette Eva, Nejsum, L. N., Klipp, E., Edwards, R., Kragelund, Birthe Brandt, Jensen, P. H. & Nissen, Poul, 2023, In: EMBO Journal. 42, 23, 21 p., e111122.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Managing fuels and fluids: Network integration of osmoregulatory and metabolic hormonal circuits in the polymodal control of homeostasis in insects

    Koyama, Takashi, Rana, Danial Wasim & Halberg, Kenneth Veland, 2023, In: BioEssays. 45, 9, 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Realizing integration in structural biology: The 2022 ISBUC Annual Meeting

    Kragelund, Birthe Brandt, Loland, Claus Juul, Montoya, Guillermo, Hatzakis, Nikos, Martinez, Karen Laurence, Gajhede, Michael, Christensen, Caspar Elo & Holt, Lucy, 2023, In: Structure. 31, 7, p. 747-754

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Response to: "Correspondence on "Safety and efficacy of faecal microbiota transplantation for active peripheral psoriatic arthritis: An exploratory randomised placebo-controlled trial'' by McGonagle et al

    Kragsnaes, M. S., Kjeldsen, J., Horn, H. C., Munk, H. L., Pedersen, J. K., Just, S. A., Ahlquist, P., Davidsen, J. R., Nilsson, A. C., Röttger, R., Kruhøffer, M., Marchesi, J. R., Kristiansen, Karsten, Christensen, R. & Ellingsen, T., 2023, In: Annals of the Rheumatic Diseases. 82, 7, 2 p., e165.

    Research output: Contribution to journal › Comment/debate › Research

  10. Published

    Isolation, (bio)synthetic studies and evaluation of antimicrobial properties of drimenol-type sesquiterpenes of Termitomyces fungi

    Kreuzenbeck, N. B., Dhiman, S., Roman, D., Burkhardt, I., Conlon, B. H., Fricke, J., Guo, H., Blume, J., Görls, H., Poulsen, Michael, Dickschat, J. S., Köllner, T. G., Arndt, H. & Beemelmanns, C., 2023, In: Communications Chemistry. 6, 14 p., 79.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    cAMP competitively inhibits periplasmic phosphatases to coordinate nutritional growth with competence of Haemophilus influenzae

    Kronborg, Kristina & Zhang, Yong, 2023, In: Journal of Biological Chemistry. 299, 12, 13 p., 105404.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    A global catalog of whole-genome diversity from 233 primate species

    Kuderna, L. F. K., Gao, H., Janiak, M. C., Kuhlwilm, M., Orkin, J. D., Bataillon, T., Manu, S., Valenzuela, A., Bergman, J., Rousselle, M., Silva, F. E., Agueda, L., Blanc, J., Gut, M., de Vries, D., Goodhead, I., Harris, R. A., Raveendran, M., Jensen, A., Chuma, I. S. & 55 others, Horvath, J. E., Hvilsom, C., Juan, D., Frandsen, P., Schraiber, J. G., de Melo, F. R., Bertuol, F., Byrne, H., Sampaio, I., Farias, I., Valsecchi, J., Messias, M., da Silva, M. N. F., Trivedi, M., Rossi, R., Hrbek, T., Andriaholinirina, N., Rabarivola, C. J., Zaramody, A., Jolly, C. J., Phillips-Conroy, J., Wilkerson, G., Abee, C., Simmons, J. H., Fernandez-Duque, E., Kanthaswamy, S., Shiferaw, F., Wu, D., Zhou, L., Shao, Y., KU, thw266, Keyyu, J. D., Knauf, S., Le, M. D., Lizano, E., Merker, S., Navarro, A., Nadler, T., Khor, C. C., Lee, J., Tan, P., Lim, W. K., Kitchener, A. C., Zinner, D., Gut, I., Melin, A. D., Guschanski, K., Schierup, M. H., Beck, R. M. D., Umapathy, G., Roos, C., Boubli, J. P., Rogers, J., Farh, K. K. H. & Marques Bonet, T., 2023, In: Science (New York, N.Y.). 380, 6648, p. 906-913 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Biological soil crusts on agricultural soils of mesic regions promote microbial cross-kingdom co-occurrences and nutrient retention

    Kurth, J. K., Albrecht, M., Glaser, K., Karsten, U., Vestergaard, G., Armbruster, M., Kublik, S., Schmid, C. A. O., Schloter, M. & Schulz, S., 2023, In: Frontiers in Microbiology. 14, 16 p., 1169958.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Fitting Force Field Parameters to NMR Relaxation Data

    Kümmerer, Felix, Orioli, S. & Lindorff-Larsen, Kresten, 5 Jun 2023, In: Journal of Chemical Theory and Computation. 19, 12, p. 3741-3751 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Rare Catechol-O-methyltransferase Missense Variants Are Structurally Unstable Proteasome Targets

    Larsen, Fia Brunsgaard Valsted, Cagiada, Matteo, Dideriksen, J., Stein, Amelie, Lindorff-Larsen, Kresten & Hartmann-Petersen, Rasmus, 2023, In: Biochemistry. 62, 8, 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Fra forsøg til forankring: Flersproget faglig skrivning på bacheloruddannelsen i biokemi

    Larsen, Sanne, Laursen, Katja Årosin & Skriver, Karen, 3 May 2023, In: Dansk universitetspædagogisk tidsskrift [online]. p. 25-40 16 p.

    Research output: Contribution to journal › Journal article › Communication

  17. Published

    Mind the gap

    Larsen-Ledet, Sven & Stein, Amelie, 2023, In: Structure. 31, 6, p. 641-643 3 p.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  18. Published

    Rooting depth and xylem vulnerability are independent woody plant traits jointly selected by aridity, seasonality, and water table depth

    Laughlin, D. C., Siefert, A., Fleri, J. R., Tumber-Dávila, S. J., Hammond, W. M., Sabatini, F. M., Damasceno, G., Aubin, I., Field, R., Hatim, M. Z., Jansen, S., Lenoir, J., Lens, F., McCarthy, J. K., Niinemets, Ü., Phillips, O. L., Attorre, F., Bergeron, Y., Bruun, H. H., Byun, C. & 18 others, Ćušterevska, R., Dengler, J., De Sanctis, M., Dolezal, J., Jiménez-Alfaro, B., Hérault, B., Homeier, J., Kattge, J., Meir, P., Mencuccini, M., Noroozi, J., Nowak, A., Peñuelas, J., Schmidt, M., Škvorc, Ž., Sultana, F., Ugarte, R. M. & Bruelheide, H., 2023, In: New Phytologist. 240, 5, 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Evidence that the domesticated fungus Leucoagaricus gongylophorus recycles its cytoplasmic contents as nutritional rewards to feed its leafcutter ant farmers

    A. Leal-Dutra, Caio, Yuen, L. M., Guedes, B. A. M., Contreras Serrano, Marta, Marques, P. E. & Shik, Jonathan Z., 2023, In: IMA Fungus. 14, 1, 13 p., 19.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Horse vocal communication: Investigating the function and production mechanisms of biphonation

    Lefevre, R. A., 2023, Department of Biology, Faculty of Science, University of Copenhagen. 208 p.

    Research output: Book/Report › Ph.D. thesis › Research

  21. Published

    Fungi and bacteria in the beds of rural and urban infants correlate with later risk of atopic diseases

    Lehtimäki, J., Gupta, S., Hjelmsø, M., Shah, S., Thorsen, Jonathan Jan Ilve, Rasmussen, Morten Arendt, Soverini, M., Li, Xuan Ji, Russel, J., Trivedi, Urvish, Brix, S., Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard, Bisgaard, H., Sørensen, Søren Johannes & Stokholm, Jakob, 2023, In: Clinical and Experimental Allergy. 53, 12, p. 1268-1278 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Liquid-Liquid Phase Separation Primes Spider Silk Proteins for Fiber Formation via a Conditional Sticker Domain

    Leppert, A., Chen, G., Lama, D., Sahin, Cagla, Railaite, V., Shilkova, O., Arndt, T., Marklund, E. G., Lane, D. P., Rising, A. & Landreh, M., 2023, In: Nano Letters. 23, 12, 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Revised fission yeast gene and allele nomenclature guidelines for machine readability

    Lera-ramírez, M., Bähler, J., Mata, J., Rutherford, K., Hoffman, C. S., Lambert, S., Oliferenko, S., Martin, S. G., Gould, K. L., Du, L., Sabatinos, S. A., Forsburg, S. L., Nielsen, Olaf, Nurse, P. & Wood, V., 2023, In: Genetics. 225, 3, 10 p., iyad143.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Targeted imaging of uPAR expression in vivo with cyclic AE105 variants

    Leth, Julie Maja, Newcombe, Estella Anne, Grønnemose, A. L., Jørgensen, Jesper Tranekjær, Qvist, K., Clausen, Anne Skovsbo, Knudsen, Line Bruhn Schneider, Kjær, Andreas, Kragelund, Birthe Brandt, Jørgensen, Thomas Jørgen Dyreborg & Ploug, Michael, 2023, In: Scientific Reports. 13, 17 p., 17248.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Resolution of eleven reported and five novel Podaxis species based on ITS phylogeny, phylogenomics, morphology, ecology, and geographic distribution

    Li, Guangshuo, A. Leal-Dutra, Caio, Cuesta Mate, Ana, Conlon, B. H., Peereboom, N., Beemelmanns, C., Aanen, D. K., Rosendahl, Søren, de Beer, Z. W. & Poulsen, Michael, 2023, In: Persoonia: Molecular Phylogeny and Evolution of Fungi. 51, p. 257-279 23 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Convergent molecular evolution of thermogenesis and circadian rhythm in Arctic ruminants

    Li, M., Li, X., Wu, Z., Zhang, G., Wang, N., Dou, M., Liu, S., Yang, C., Meng, G., Sun, H., Hvilsom, C., Xie, G., Li, Y., Li, Z. H., Wang, W., Jiang, Y., Heller, Rasmus & Wang, Y., 2023, In: Proceedings of the Royal Society B: Biological Sciences. 290, 1999, 10 p., 20230538.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Seasonal and diel patterns of biogenic volatile organic compound fluxes in a subarctic tundra

    Li, Tao, Baggesen, N., Seco, Roger & Rinnan, Riikka, 2023, In: Atmospheric Environment. 292, 12 p., 119430.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    A catalog of bacterial reference genomes from cultivated human oral bacteria

    Li, W., Liang, H., Lin, X., Hu, T., Wu, Z., He, W., Wang, M., Zhang, J., Jie, Zhuye, Jin, X., Xu, X., Wang, J., Yang, H., Zhang, W., Kristiansen, Karsten, Xiao, L. & Zou, Y., 2023, In: npj Biofilms and Microbiomes. 9, 1, 13 p., 45.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Differential responses of the gut microbiome and resistome to antibiotic exposures in infants and adults

    Li, Xuan Ji, Brejnrod, A., Thorsen, J., Zachariasen, Trine, Trivedi, Urvish, Russel, J., Vestergaard, G. A., Stokholm, Jakob, Rasmussen, Morten Arendt & Sørensen, Søren Johannes, 2023, In: Nature Communications. 14, 1, 16 p., 8526.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    A clade of RHH proteins ubiquitous in Sulfolobales and their viruses regulates cell cycle progression

    Li, X., Lozano-Madueno, C., Martinez Alvarez, Laura & Peng, Xu, 2023, In: Nucleic acids symposium series. 51, 4, 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Fast and accurate out-of-core PCA framework for large scale biobank data

    Li, Z., Meisner, Jonas & Albrechtsen, Anders, 2023, In: Genome Research. 33, 9, p. 1599-1608 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    The history of Coast Salish “woolly dogs” revealed by ancient genomics and Indigenous Knowledge

    Lin, A. T., Hammond-Kaarremaa, L., Liu, H-L., Stantis, C., McKechnie, I., Pavel, M., Pavel, S. S. M., Wyss, S. S., Sparrow, D. Q., Carr, K., Aninta, S. G., Perri, A., Hartt, J., Bergström, A., Carmagnini, A., Charlton, S., Dalén, L., Feuerborn, T. R., France, C. A. M., Gopalakrishnan, S. & 13 others, Grimes, V., Harris, A., Kavich, G., Sacks, B. N., Sinding, Mikkel Holger Strander, Skoglund, P., Stanton, D. W. G., Ostrander, E. A., Larson, G., Armstrong, C. G., Frantz, L. A. F., Hawkins, M. T. R. & Kistler, L., 2023, In: Science. 382, 6676, p. 1303-1309 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    A quantitative trait locus conferring flood tolerance to deepwater rice regulates the formation of two distinct types of aquatic adventitious roots

    Lin, C., Peralta Ogorek, Lucas León, Liu, D., Pedersen, Ole & Sauter, M., 2023, In: New Phytologist. 238, 4, 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Molecular basis for inhibition of type III-B CRISPR-Cas by an archaeal viral anti-CRISPR protein

    Lin, Jinzhong, Alfastsen, L., Bhoobalan, Yuvaraj & Peng, Xu, 2023, In: Cell Host and Microbe. 31, 11, p. 1837-1849.e5 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Underestimated Interannual Variability of Terrestrial Vegetation Production by Terrestrial Ecosystem Models

    Lin, S., Hu, Z., Wang, Y., Chen, X., He, B., Song, Z., Sun, S., Wu, C., Zheng, Y., Xia, X., Liu, L., Tang, Jing, Sun, Q., Joos, F. & Yuan, W., 2023, In: Global Biogeochemical Cycles. 37, 4, 15 p., e2023GB007696.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    The genomic landscape of reference genomes of cultivated human gut bacteria

    Lin, X., Hu, T., Chen, J., Liang, H., Zhou, J., Wu, Z., Ye, C., Jin, X., Xu, X., Zhang, W., Jing, X., Yang, T., Wang, J., Yang, H., Kristiansen, Karsten, Xiao, L. & Zou, Y., 2023, In: Nature Communications. 14, 1, 11 p., 1663.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Cationic amphiphilic antihistamines inhibit STAT3 via Ca2+-dependent lysosomal H+ efflux

    Liu, B., Chen, R., Zhang, Y., Huang, J., Luo, Y., Rosthøj, Susanne, Zhao, C. & Jaattela, Marja, 2023, In: Cell Reports. 42, 2, 20 p., 112137.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Integrative genetic and single cell RNA sequencing analysis provides new clues to the amyotrophic lateral sclerosis neurodegeneration

    Liu, H., Guan, Liping, Deng, M., Bolund, L., Kristiansen, Karsten, Zhang, J., Luo, Y. & Zhang, Z., 2023, In: Frontiers in Neuroscience. 17, 10 p., 1116087.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Development of a novel SRAP-SCAR marker for rapid identification of lager and ale types in brewer's yeast

    Liu, J., Cai, G., Li, X. & Lu, J., 2023, In: Molecular Biology Reports. 50, 6 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  40. Published

    Mendelian randomization analyses reveal causal relationships between the human microbiome and longevity

    Liu, X., Zou, L., Nie, C., Qin, Y., Tong, X., Wang, J., Yang, H., Xu, X., Jin, X., Xiao, L., Zhang, T., Min, J., Zeng, Y., Jia, H. & Hou, Y., 2023, In: Scientific Reports. 13, 1, 13 p., 5127.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Sex differences in the oral microbiome, host traits, and their causal relationships

    Liu, X., Tong, X., Jie, Z., Zhu, J., Tian, L., Sun, Q., Ju, Y., Zou, L., Lu, H., Qiu, X., Li, Q., Liao, Y., Lian, H., Zuo, Y., Chen, X., Rao, W., Ren, Y., Wang, Y., Zi, J., Wang, R. & 11 others, Xu, X., Yang, H., Wang, J., Zong, Y., Liu, W., Hou, Y., Jin, X., Xiao, L., Kristiansen, Karsten, Jia, H. & Zhang, T., 2023, In: iScience. 26, 1, 23 p., 105839.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    The C:N: P stoichiometry in bryophytes: relationships with habitat, climate and growth form

    Liu, X., Wang, Z., Li, X., Bao, W. & Rousk, Kathrin, 2023, In: National Science Review. 10, 4, 3 p., nwad060.

    Research output: Contribution to journal › Letter › Research › peer-review

  43. Published

    Allometric relationships between leaf and petiole traits across 31 floating-leaved plants reveal a different adaptation pattern from terrestrial plants

    Liu, Y., Liu, H., Båstrup-Spohr, Lars, Li, Z., Li, W., Pan, J. & Cao, Y., 2023, In: Annals of Botany. 131, 3, 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Clinical diagnosis of genetic disorders at both single-nucleotide and chromosomal levels based on BGISEQ-500 platform

    Liu, Y., Mao, L., Huang, H., Li, W., Man, J., Zhang, W., Wang, L., Li, L., Sun, Y., Zhai, T., Guo, X., Du, L., Huang, J., Li, H., Wan, Y. & Wei, X., 2023, In: Human Genome Variation. 10, 1, 43 p., 15.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Variational Open-Domain Question Answering

    Liévin, V., Motzfeldt, A. G., Jensen, I. R. & Winther, Ole, 2023, In: Proceedings of Machine Learning Research. 202, p. 20950-20977 28 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  46. Published

    The Drosophila tumor necrosis factor receptor, Wengen, couples energy expenditure with gut immunity

    Loudhaief, Rihab, Jneid, Rouba, Christensen, Christian Fokdal, Mackay, Duncan John, Andersen, Ditte Skovaa & Colombani, Julien, 2023, In: Science Advances. 9, 23, 15 p., eadd4977.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Ancient dolphin genomes reveal rapid repeated adaptation to coastal waters

    Louis, Marie Georgette Yolande J, Korlević, P., Nykänen, M., Archer, F., Berrow, S., Brownlow, A., Lorenzen, Eline, O'Brien, J., Post, K., Racimo, Fernando, Rogan, E., Rosel, P. E., Sinding, Mikkel Holger Strander, van der Es, H., Wales, N., Fontaine, M. C., Gaggiotti, O. E. & Foote, A. D., 2023, In: Nature Communications. 14, 13 p., 4020.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Lactate receptor GPR81 drives breast cancer growth and invasiveness through regulation of ECM properties and Notch ligand DLL4

    Jørgensen, Kathrine Lundø, Dmytriyeva, O., Spøhr, L., Alves, Eliana Carolina Goncalves, Yao, Jiayi, Puig Blasco, Laia, Trauelsen, Mette, Ponniah, M., Severin, M., Sandelin, Albin Gustav, Kveiborg, Marie, Schwartz, Thue W. & Pedersen, Stine Helene Falsig, 2023, In: BMC Cancer. 23, 1, 20 p., 1136.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Phagotrophic Protists Modulate Copper Resistance of the Bacterial Community in Soil

    Lv, Z., Xu, M., Liu, Y., Rønn, Regin, Rensing, C., Liu, S., Gao, S., Liao, H., Liu, Y. R., Chen, W., Zhu, Y. G., Huang, Q. & Hao, X., 2023, In: Environmental Science and Technology. 57, 9, p. 3590-3601 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Soil aggregates affect the legacy effect of copper pollution on the microbial communities

    Lv, Z., Rønn, Regin, Liao, H., Rensing, C., Chen, W., Huang, Q. & Hao, X., 2023, In: Soil Biology and Biochemistry. 182, 10 p., 109048.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Non-invasive investigation of the morphology and optical properties of the upside-down jellyfish Cassiopea with optical coherence tomography

    Lyndby, N. H., Murthy, Swathi, Bessette, S., Jakobsen, S. L., Meibom, A. & Kühl, Michael, 2023, In: Proceedings of the Royal Society B: Biological Sciences. 290, 2007, 11 p., 20230127.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    The mesoglea buffers the physico-chemical microenvironment of photosymbionts in the upside-down jellyfish Cassiopea sp.

    Lyndby, N. H., Murray, M. C., Trampe, Erik, Meibom, A. & Kühl, Michael, 2023, In: Frontiers in Ecology and Evolution. 11, 12 p., 1112742.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    Regulation of plant immunity via small RNA-mediated control of NLR expression

    López Márquez, Diego, Del-Espino, Á., Ruiz-Albert, J., Bejarano, E. R., Brodersen, Peter & Beuzón, C. R., 2023, In: Journal of Experimental Botany. 74, 19, p. 6052-6068 17 p.

    Research output: Contribution to journal › Review › Research › peer-review

  54. Published

    Draft genomes of seven isolates from Danish wastewater facilities belonging to Pseudomonas, Bacillus, Pseudochrobactrum, Brevundimonas, and Pandoraea

    Maccario, Lorrie, Silva, A. F., Nesme, Joseph, Amador Hierro, Cristina Isabel, Sørensen, Søren Johannes, Cooper, V. S. & Røder, Henriette Lyng, 2023, In: Microbiology resource announcements. 12, 12, 4 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  55. Published

    Progesterone distribution in the trigeminal system and its role to modulate sensory neurotransmission: influence of sex

    Maddahi, A., Warfvinge, K., Holm, A., Edvinsson, J. C. A., Reducha, Philip Victor, Kazantzi, Spyridoula, Haanes, Kristian Agmund & Edvinsson, L., 2023, In: Journal of Headache and Pain. 24, 1, 16 p., 154.

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    Den danske checkliste over bier er blevet opdateret

    Madsen, Henning Bang, Calabuig, Isabel & Rasmussen, C., 2023

    Research output: Other contribution › Net publication - Internet publication › Communication

  57. Published

    Molecular insights into alginate beta-lactoglobulin A multivalencies: The foundation for their amorphous aggregates and coacervation

    Madsen, M., Prestel, Andreas, Madland, E., Westh, P., Tondervik, A., Sletta, H., Peters, G. H. J., Aachmann, F. L. L., Kragelund, Birthe Brandt & Svensson, B., 2023, In: Protein Science. 32, 2, 15 p., 4556.

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. Published

    Fission yeast Swi2 designates cell-type specific donor and stimulates Rad51-driven strand exchange for mating-type switching

    Maki, T., Thon, Genevieve & Iwasaki, H., 2023, In: Nucleic acids symposium series. 51, 8, 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. E-pub ahead of print

    Carbon and nitrogen uptake through photosynthesis and feeding by photosymbiotic Acantharia

    Mansour, J. S., Hansen, Per Juel, Leroux, C. & Not, F., 2023, (E-pub ahead of print) In: Open Research Europe.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    Environmental predictors of lake fish diversity across gradients in lake age and spatial scale

    Martinsen, Kenneth Thorø, Kristensen, E., Båstrup-Spohr, Lars, Søndergaard, M., Carl, Henrik, Jeppesen, E., Sand-Jensen, Kaj & Kragh, T., 2023, In: Freshwater Biology. 68, 7, 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Predicting lake bathymetry from the topography of the surrounding terrain using deep learning

    Martinsen, Kenneth Thorø, Sand-Jensen, Kaj & Selvan, Raghav, 2023, In: Limnology and Oceanography: Methods. 21, 10, p. 625-636

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    Plant YTHDF proteins are direct effectors of antiviral immunity against an N6-methyladenosine-containing RNA virus

    Martínez-Pérez, M., Aparicio, F., Arribas Hernandez, Laura, Tankmar, Mathias Due, Rennie, Sarah, von Bülow, Sören, Lindorff-Larsen, Kresten, Brodersen, Peter & Pallas, V., 2023, In: EMBO Journal. 42, 18, 17 p., e113378.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Effects of Glacial Flour on Marine Micro-plankton: Evidences from Natural Communities of Greenlandic Fjords and Experimental Studies

    Maselli, Maira, Meire, L., Meire, P. & Hansen, Per Juel, 2023, In: Protist. 174, 1, 17 p., 125928.

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    Redox state and altered pyruvate metabolism contribute to a dose-dependent metformin-induced lactate production of human myotubes

    Maurer, J., Zhao, X., Irmler, M., Gudiksen, Anders, Pilmark, N. S., Li, Q., Goj, T., Beckers, J., Hrabě De Angelis, M., Birkenfeld, A. L., Peter, A., Lehmann, R., Pilegaard, Henriette, Karstoft, Kristian, Xu, G. & Weigert, C., 2023, In: American Journal of Physiology: Cell Physiology. 325, 4, p. C1131-C1143 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    Strain-specific quorum-sensing responses determine virulence properties in Vibrio anguillarum

    Mauritzen, Jesper Juel, Søndberg, E., Kalatzis, Panagiotis, Roager, L., Gram, L., Svenningsen, Sine Lo & Middelboe, Mathias, 2023, In: Environmental Microbiology. 25, 7, 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    A host of armor: Prokaryotic immune strategies against mobile genetic elements

    Mayo-Muñoz, D., Pinilla Redondo, Rafael, Birkholz, N. & Fineran, P. C., 2023, In: Cell Reports. 42, 7, 14 p., 112672.

    Research output: Contribution to journal › Review › Research › peer-review

  67. Published

    The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics

    Mc Cartney, A. M., Formenti, G., Mouton, A., Panis, D. D., Marins, L. S., Leitão, H. G., Diedericks, G., Kirangwa, J., Morselli, M., Salces-Ortiz, J., Escudero, N., Iannucci, A., Natali, C., Svardal, H., Fernández, R., Pooter, T. D., Joris, G., Strazisar, M., Wood, J., Herron, K. E. & 30 others, Seehausen, O., Watts, P. C., Shaw, F., Davey, R. P., Minotto, A., Fernández, J. M., Böhne, A., Alegria, C., Alioto, T., Alves, P. C., Amorim, I. R., Aury, J., Backstrom, N., Baldrian, P., Baltrunaite, L., Barta, E., Bed’Hom, B., Belser, C., Bergsten, J., Bertrand, L., Bilandžija, H., Binzer-Panchal, M., Bista, I., Blaxter, M., Borges, P. A., Dias, G. B., Bosse, M., Garg, S., Madsen, O. & Stiller, Josefin, 2023, 51 p. (bioRxiv).

    Research output: Working paper › Preprint › Research

  68. Published

    Pooled analysis of frontal lobe transcriptomic data identifies key mitophagy gene changes in Alzheimer's disease brain

    Mei, T., Li, Yuan, Orduña Dolado, A., Li, Zhiquan, Andersson, Robin, Berliocchi, Laura & Rasmussen, Lene Juel, 2023, In: Frontiers in Aging Neuroscience. 15, 14 p., 1101216.

    Research output: Contribution to journal › Journal article › Research › peer-review

  69. Published

    When gluttony strikes: how high-fat diet impairs hepatic Ca2+ signalling

    Merrild, C. & Johansen, Valdemar Brimnes Ingemann, 2023, In: Journal of Physiology. 601, 12, p. 2245-2247

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  70. Published

    Primary cilia as dynamic and diverse signalling hubs in development and disease

    Mill, P., Christensen, Søren Tvorup & Pedersen, Lotte Bang, 2023, In: Nature Reviews. Genetics. 24, 21 p.

    Research output: Contribution to journal › Review › Research › peer-review

  71. Published

    The Mixoplankton Database (MDB): Diversity of photo‐phago‐trophic plankton in form, function, and distribution across the global ocean

    Mitra, A., Caron, D. A., Faure, E., Flynn, K. J., Leles, S. G., Hansen, Per Juel, McManus, G. B., Not, F., Rosario Gomes, H. D., Santoferrara, L. F., Stoecker, D. K. & Tillmann, U., 2023, In: Journal of Eukaryotic Microbiology. 70, 4, 25 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    High nutrient loads hinder successful restoration of natural habitats in freshwater wetlands

    Moeslund, J. E., Andersen, D. K., Brunbjerg, A. K., Bruun, Hans Henrik, Fløjgaard, C., McQueen, S. N., Nygaard, B. & Ejrnæs, R., 2023, In: Restoration Ecology. 31, 7, 13 p., e13796.

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    Microplastic pollution associated with reduced respiration in seagrass (Zostera marina L.) and associated epiphytes

    Molin, J. M., Groth-Andersen, W. E., Hansen, Per Juel, Kühl, Michael & Brodersen, Kasper Elgetti, 2023, In: Frontiers in Marine Science. 10, 14 p., 1216299.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. E-pub ahead of print

    Controlling biases in targeted plant removal experiments

    Monteux, S., Blume-Werry, G., Gavazov, K., Kirchhoff, L., Krab, E. J., Lett, Signe, Pedersen, Emily Pickering & Väisänen, M., 2023, (E-pub ahead of print) In: New Phytologist.

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    Plasmid permissiveness of wastewater microbiomes can be predicted from 16S rRNA sequences by machine learning

    Moradigaravand, D., Li, L., Dechesne, A., Nesme, Joseph, de la Cruz, R., Ahmad, H., Banzhaf, M., Sørensen, Søren Johannes, Smets, B. F. & Kreft, J. U., 2023, In: Bioinformatics (Oxford, England). 39, 7, 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  76. Published

    Benchmarking RNA Editing Detection Tools

    Morales, D. R., Rennie, Sarah & Uchida, S., 2023, In: BioTech. 12, 3, 18 p., 56.

    Research output: Contribution to journal › Review › Research › peer-review

  77. Published

    The genetic background of hydrocephalus in a population-based cohort: implication of ciliary involvement

    Munch, Tina Nørgaard, Hedley, P. L., Hagen, C. M., Baekvad-Hansen, M., Geller, F., Bybjerg-Grauholm, J., Nordentoft, Merete, Borglum, A. D., Werge, Thomas, Melbye, M., Hougaard, D. M., Larsen, Lars Allan, Christensen, Søren Tvorup & Christiansen, M., 2023, In: Brain Communications. 5, 1, 14 p., fcad004.

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    Impact of Microbial Symbionts on Fungus-Farming Termites and Their Derived Ecosystem Functions

    Murphy, Rob, Sinotte, Veronica Marie, Schmidt, Suzanne, Li, Guangshuo, Hamilton Renalias, J., Koné, N. A. & Poulsen, Michael, 2023, Assessing the Microbiological Health of Ecosystems. Hurst, C. J. (ed.). Wiley, p. 185-203

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  79. Published

    RibDif2: expanding amplicon analysis to full genomes

    Murphy, Rob & Strube, M. L., 2023, In: Bioinformatics Advances. 3, 1, 5 p., vbad111.

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    Modeling the radiative, thermal and chemical microenvironment of 3D scanned corals

    Murthy, Swathi, Picioreanu, C. & Kühl, Michael, 2023, In: Frontiers in Marine Science. 10, 17 p., 1160208.

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    Molecular Characterization and Morpho-Taxonomy of Gambierdiscus caribaeus Vandersea, Litaker, M.A.Faust, Kibler, W.C.Holland & P.A.Tester (Dinophyceae) from Mauritius Island, South-West Indian Ocean

    Mussai, P., Larsen, Jacob & Jeewon, R., 2023, In: Cryptogamie, Algologie. 44, 1, p. 1-11 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    Ribosomal DNA Sequence-Based Taxonomy and Antimicrobial Activity of Prorocentrum spp. (Dinophyceae) from Mauritius Coastal Waters, South-West Indian Ocean

    Mussai, P., Larsen, Jacob, Alrefaei, A. F. & Jeewon, R., 2023, In: Marine Drugs. 21, 4, 16 p., 216.

    Research output: Contribution to journal › Journal article › Research › peer-review

  83. Published

    Flood-tolerant rice for enhanced production and livelihood of smallholder farmers of Africa

    Mwakyusa, L., Dixit, S., Herzog, Max, Heredia, M. C., Madege, R. R. & Kilasi, N. L., 2023, In: Frontiers in Sustainable Food Systems. 7, 13 p., 1244460.

    Research output: Contribution to journal › Review › Research › peer-review

  84. Published

    Screening of potential donors for anaerobic stress tolerance during germination in rice

    Mwakyusa, L., Heredia, M. C., Kilasi, N. L., Madege, R. R., Herzog, Max & Dixit, S., 2023, In: Frontiers in Plant Science. 14, 13 p., 1261101.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    High-resolution crystal structure of the Mu8.1 conotoxin from Conus mucronatus

    Müller, E., Hackney, Celeste Menuet, Ellgaard, Lars & Morth, J. P., 2023, In: Acta crystallographica. Section F, Structural biology communications. 79, 9, p. 240-246 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  86. Published

    NHA1 is a cation/proton antiporter essential for the water-conserving functions of the rectal complex in Tribolium castaneum.

    Naseem, Muhammad Tayyib, Beaven, R., Koyama, Takashi, Naz, S., Su, S., Leader, D. P., Klærke, Dan Arne, Callø, Kirstine, Denholm, B. & Halberg, Kenneth Veland, 2023, In: Proceedings of the National Academy of Sciences of the United States of America. 120, 13, 11 p., e2217084120.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    Plastic debris in lakes and reservoirs

    Nava, V., Chandra, S., Aherne, J., Alfonso, M. B., Antão-Geraldes, A. M., Attermeyer, K., Bao, R., Bartrons, M., Berger, S. A., Biernaczyk, M., Bissen, R., Brookes, J. D., Brown, D., Cañedo-Argüelles, M., Canle, M., Capelli, C., Carballeira, R., Cereijo, J. L., Chawchai, S., Christensen, S. T. & 59 others, Christoffersen, Kirsten Seestern, de Eyto, E., Delgado, J., Dornan, T. N., Doubek, J. P., Dusaucy, J., Erina, O., Ersoy, Z., Feuchtmayr, H., Frezzotti, M. L., Galafassi, S., Gateuille, D., Gonçalves, V., Grossart, H. P., Hamilton, D. P., Harris, T. D., Kangur, K., Kankılıç, G. B., Kessler, R., Kiel, C., Krynak, E. M., Leiva-Presa, À., Lepori, F., Matias, M. G., Matsuzaki, S. I. S., McElarney, Y., Messyasz, B., Mitchell, M., Mlambo, M. C., Motitsoe, S. N., Nandini, S., Orlandi, V., Owens, C., Özkundakci, D., Pinnow, S., Pociecha, A., Raposeiro, P. M., Rõõm, E. I., Rotta, F., Salmaso, N., Sarma, S. S. S., Sartirana, D., Scordo, F., Sibomana, C., Siewert, D., Stepanowska, K., Tavşanoğlu, Ü. N., Tereshina, M., Thompson, J., Tolotti, M., Valois, A., Verburg, P., Welsh, B., Wesolek, B., Weyhenmeyer, G. A., Wu, N., Zawisza, E., Zink, L. & Leoni, B., 2023, In: Nature. 619, p. 317-322 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    Gambierdiscus (gonyaulacales, dinophyceae) diversity in Vietnamese waters with description of G. vietnamensis sp. nov.

    Nguyen-Ngoc, L., Larsen, Jacob, Doan-Nhu, H., Nguyen, X. V., Chomérat, N., Lundholm, Nina, Phan-Tan, L., Dao, H. V., Nguyen, N. L., Nguyen, H. H. & Van Chu, T., 2023, In: Journal of Phycology. 59, 3, p. 496-517

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    Reasons for the dramatic loss of Lobelia dortmanna, a keystone plant species of softwater lakes in the Northern Hemisphere

    Nielsen, S. R., Martinsen, Kenneth Thorø, Pedersen, Ole & Båstrup-Spohr, Lars, 2023, In: Freshwater Biology. 68, 10, p. 1673-1684 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Global online trade in primates for pets

    Nijman, V., Morcatty, T. Q., El Bizri, H. R., Al-Razi, H., Ang, A., Ardiansyah, A., Atoussi, S., Bergin, D., Bell, S., Braga-Pereira, F., Campera, M., Das, N., Silva, F. E., Feddema, K., Foreman, G., Fourage, A., Gnanaolivu, S. D., Hansen, M. F., Račevska, E., Rapone, B. C. & 13 others, Regmi, G. R., Shepherd, C. R., Shukhova, S., Siriwat, P., Smith, J. H., Mir Mohamad Tabar, S. A., Tavares, A. S., Weldon, A. V., Wilson, A., Yamaguchi, N., Zhang, M., Svensson, M. S. & Anne-Isola Nekaris, K., 2023, In: Environmental Development. 48, 15 p., 100925.

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    Application of whole genome sequencing data in population genetics: identifying sex-linked scaffolds and inferring admixture in a unique cattle population

    Nursyifa, Casia, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 225 p.

    Research output: Book/Report › Ph.D. thesis › Research

  92. Published

    Exploring antidepressant treatment response using biological and clinical measurements

    Nøhr, A. K., 2023, Department of Biology, Faculty of Science, University of Copenhagen. 125 p.

    Research output: Book/Report › Ph.D. thesis › Research

  93. Published

    The barrier to radial oxygen loss protects roots against hydrogen sulphide intrusion and its toxic effect

    Peralta Ogorek, Lucas León, Takahashi, H., Nakazono, M. & Pedersen, Ole, 2023, In: New Phytologist. 238, 5, p. 1825-1837 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    Long-read MinION™ sequencing of 16S and 16S-ITS-23S rRNA genes provides species-level resolution of Lactobacillaceae in mixed communities

    Olivier, S. A., Bull, M. K., Strube, M. L., Murphy, Rob, Ross, T., Bowman, J. P. & Chapman, B., 2023, In: Frontiers in Microbiology. 14, 15 p., 1290756.

    Research output: Contribution to journal › Journal article › Research › peer-review

  95. Published

    Salt-affected soils in Tanzanian agricultural lands: Type of soils and extent of the problem

    Omar, M. M., Shitindi, M. J., Massawe, B. H. J., Fue, K. G., Meliyo, J. L. & Pedersen, Ole, 2023, In: Sustainable Environment. 9, 1, 19 p., 2205731.

    Research output: Contribution to journal › Review › Research › peer-review

  96. Published

    Seabird’s cry: repertoire and vocal expression of contextual valence in the little auk (Alle alle)

    Osiecka, A. N., Briefer, Elodie, Kidawa, D. & Wojczulanis-Jakubas, K., 2023, In: Scientific Reports. 13, 1, 10 p., 8623.

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    Social calls of the little auk (Alle alle) reflect body size and possibly partnership, but not sex

    Osiecka, A. N., Briefer, Elodie, Kidawa, D. & Wojczulanis-jakubas, K., 2023, In: Royal Society Open Science. 10, 9, 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Integrated NMR/Molecular Dynamics Determination of the Ensemble Conformation of a Thermodynamically Stable CUUG RNA Tetraloop

    Oxenfarth, A., Kümmerer, Felix, Bottaro, S., Schnieders, R., Pinter, G., Jonker, H. R. A., Fürtig, B., Richter, C., Blackledge, M., Lindorff-Larsen, Kresten & Schwalbe, H., 2023, In: Journal of the American Chemical Society. 145, 30, p. 16557-16572 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Use and detection of a vitamin B1 degradation product yields new views of the marine B1 cycle and plankton metabolite exchange

    Paerl, R. W., Curtis, N. P., Bittner, Meriel Jennifer, Cohn, M. R., Gifford, S. M., Bannon, C. C., Rowland, E. & Bertrand, E. M., 2023, In: mBio. 14, 4, 21 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    CNEReg Interprets Ruminant-specific Conserved Non-coding Elements by Developmental Gene Regulatory Network

    Pan, X., Ma, Z., Sun, X., Li, H., Zhang, T., Zhao, C., Wang, N., Heller, Rasmus, Hung Wong, W., Wang, W., Jiang, Y. & Wang, Y., 2023, In: Genomics, Proteomics and Bioinformatics. 21, 3, p. 632-648 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  101. Published

    Epithelium dynamics differ in time and space when exposed to the permeation enhancers penetramax and EGTA. A head-to-head mechanistic comparison

    Panou, D. A., Pedersen, Stine Helene Falsig, Kristensen, Mie & Nielsen, Hanne Mørck, 2023, In: Frontiers in Drug Delivery. 3, 16 p., 1221628.

    Research output: Contribution to journal › Journal article › Research › peer-review

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