- 2021
- Published
Global Landscape of Clostridioides Difficile Phylogeography, Antibiotic Susceptibility, and Toxin Polymorphisms by Post-Hoc Whole-Genome Sequencing from the MODIFY I/II Studies
Zhao, Hailong, Nickle, D. C., Zeng, Z., Law, P. Y. T., Wilcox, M. H., Chen, L., Peng, Y., Meng, J., Deng, Z., Albright, A., Zhong, H., Xu, X., Zhu, S., Shen, J., Blanchard, R. L., Dorr, M. B., Shaw, P. M. & Li, J., 2021, In: Infectious Diseases and Therapy. 10, 2, p. 853-870 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Growing season leaf carbon:nitrogen dynamics in Arctic tundra vegetation from ground and Sentinel-2 observations reveal reallocation timing and upscaling potential
Westergaard-Nielsen, Andreas, Christiansen, C. T. & Elberling, Bo, 2021, In: Remote Sensing of Environment. 262, 11 p., 112512.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)
Klionsky, D. J., Abdel-Aziz, A. K., Abdelfatah, S., Abdellatif, M., Abdoli, A., Abel, S., Abeliovich, H., Abildgaard, M. H., Abudu, Y. P., Acevedo-Arozena, A., Adamopoulos, I. E., Adeli, K., Adolph, T. E., Adornetto, A., Aflaki, E., Agam, G., Agarwal, A., Aggarwal, B. B., Agnello, M., Agostinis, P. & 2,908 others, , 2021, In: Autophagy. 17, p. 1-382 382 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Gut Microbiota Linked with Reduced Fear of Humans in Red Junglefowl Has Implications for Early Domestication
Puetz, Lara Christine, Delmont, T. O., Aizpurua Arrieta, Ostaizka, Guo, C., KU, thw266, Katajamaa, R., Jensen, P. & Gilbert, M Thomas P, 2021, In: Advanced Genetics. 2, 4, 12 p., 2100018.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Gut Microbiota Perturbation in IgA Deficiency Is Influenced by IgA-Autoantibody Status
Moll, J. M., Myers, P. N., Zhang, C., Eriksen, C., Wolf, J., Appelberg, K. S., Lindberg, G., Bahl, M. I., Zhao, H., Pan-Hammarström, Q., Cai, K., Jia, H., Borte, S., Nielsen, H. B., Kristiansen, Karsten, Brix, S. & Hammarström, L., 2021, In: Gastroenterology. 160, 7, p. 2423-2434.e5Research output: Contribution to journal › Journal article › Research › peer-review
- Published
HABs under global change: Experimental conditions and approaches
van der Waal, D. B., Bach, L., Berdalet, E., Brandenburg, K. M., Suikkanen, S., Wohlrab, S., Hansen, Per Juel & Kremp, A., 2021, Guidelines for the study of climate change effects on HABs. Enevoldsen, H. & Sun, Y. (eds.). Unesco, p. 36-63 (IOC Manual and Guides, Vol. 88).Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research › peer-review
- Published
Habitat type and community age as barriers to alien plant invasions in coastal species-habitat networks
Lami, F., Vitti, S., Marini, L., Pellegrini, Elisa, Casolo, V., Trotta, G., Sigura, M. & Boscutti, F., 2021, In: Ecological Indicators. 133, 10 p., 108450.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Hairs distinguish castes and sexes: identifying the early ontogenetic building blocks of a fungus-farming superorganism (Hymenoptera: Formicidae)
Adams, R. M. M., Larsen, Rasmus Stenbak, Stylianidi, N., Cheung, D., Qiu, Bitao, Murray, S. K., KU, thw266 & Boomsma, Jacobus J., 2021, In: Myrmecological News. 31, p. 201-216 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Have the eyes of bioluminescent scale worms adapted to see their own light? A comparative study of eyes and vision in Harmothoe imbricata and Lepidonotus squamatus
Garm, Anders Lydik, Simonsen, S. H., Mendoza-González, P. & Worsaae, Katrine, 2021, In: Journal of Experimental Biology. 224, 14, 10 p., jeb242501.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Hibernation factors directly block ribonucleases from entering the ribosome in response to starvation: [+ erratum]
Prossliner, T., Gerdes, K., Sørensen, Michael Askvad & Winther, K. S., 2021, In: Nucleic Acids Research. 49, 4, p. 2226-2239 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High genetic diversity and low differentiation reflect the ecological versatility of the African leopard
Chrzanová Pecnerová, Patrícia, Garcia Erill, Genís, Liu, Xiaodong, Nursyifa, Casia, Waples, R. K., Santander, Cindy, Quinn, Liam James Elgaard, Frandsen, P., Meisner, Jonas, Stæger, Frederik Filip Vinggaard, Rasmussen, Malthe Sebro, Brüniche-Olsen, Anna, Jørgensen, C. H. F., Rodrigues da Fonseca, Rute Andreia, Siegismund, Hans Redlef, Albrechtsen, Anders, Heller, Rasmus, Moltke, Ida & Hanghøj, Kristian Ebbesen, 2021, In: Current Biology. 31, 9, p. 1862-1871, e1-e5Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High metabolic substrate load induces mitochondrial dysfunction in rat skeletal muscle microvascular endothelial cells
Hansen, Camilla Collin, Olsen, K., Pilegaard, Henriette, Bangsbo, Jens, Gliemann, Lasse & Hellsten, Ylva, 2021, In: Physiological Reports. 9, 14, 17 p., e14855.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High-throughput analyses and Bayesian network modeling highlight novel epigenetic Adverse Outcome Pathway networks of DNA methyltransferase inhibitor mediated transgenerational effects
Song, Y., Kamstra, J. H., Cao, Y., Asselman, J., Anglès d'Auriac, M. & Friberg, N., 2021, In: Journal of Hazardous Materials. 408, 124490.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High-throughput proteomics of breast cancer interstitial fluid: identification of tumor subtype-specific serologically relevant biomarkers
Terkelsen, T., Pernemalm, M., Gromov, P., Borresen-Dale, A., Krogh, Anders, Haakensen, V. D., Lethio, J., Papaleo, E. & Gromova, I., 2021, In: Molecular Oncology. 15, 2, p. 429-461 33 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High-throughput screening alternative to crystal violet biofilm assay combining fluorescence quantification and imaging
Amador Hierro, Cristina Isabel, Stannius, R. O., Røder, Henriette Lyng & Burmølle, Mette, 2021, In: Journal of Microbiological Methods. 190, 5 p., 106343.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Historical population declines prompted significant genomic erosion in the northern and southern white rhinoceros (Ceratotherium simum)
Sánchez-Barreiro, F., Gopalakrishnan, Shyam, Ramos Madrigal, Jazmin, Westbury, Michael Vincent, de Manuel, M., Margaryan, Ashot, Ciucani, M. M., Vieira, Filipe Garrett, Patramanis, Ioannis, Kalthoff, D. C., Timmons, Z., Sicheritz-Pontén, Thomas, Dalén, L., Ryder, O. A., KU, thw266, Marques-Bonet, T., Moodley, Y. & Gilbert, M Thomas P, 2021, In: Molecular Ecology. 30, 23, p. 6355-6369 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Hormetic responses in arbuscular mycorrhizal fungi
Jakobsen, Iver, Murmann, L. M. & Rosendahl, Søren, 2021, In: Soil Biology & Biochemistry. 159, 6 p., 108299.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
How robust are cross-population signatures of polygenic adaptation in humans?
Refoyo Martínez, Alba, Liu, S., Jørgensen, A. M., Jin, X., Albrechtsen, Anders, Martin, A. R. & Racimo, Fernando, 2021, In: Peer Community Journal. 1, 54 p., e22.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Hvilken natur kan vi få på våde lavbundsjorde?
Sand-Jensen, Kaj, Baumane, Marta, Båstrup-Spohr, Lars & Bruun, Hans Henrik, 2021, In: Aktuel Naturvidenskab. 2021, 6, p. 28-33Research output: Contribution to journal › Journal article › Communication
- Published
Hyperspectral Luminescence Imaging in Combination with Signal Deconvolution Enables Reliable Multi-Indicator-Based Chemical Sensing
Zieger, S. E., Moßhammer, Maria, Kühl, Michael & Koren, K., 2021, In: ACS Sensors. 6, 1, p. 183-191Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Identification for Genetic Mechanism of Flightlessness in Penguins
Fang, Q., 2021, Department of Biology, Faculty of Science, University of Copenhagen. 243 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Identification of Beneficial Microbial Consortia and Bioactive Compounds with Potential as Plant Biostimulants for a Sustainable Agriculture
Tabacchioni, S., Passato, S., Ambrosino, P., Huang, L., Caldara, M., Cantale, C., Hett, J., Del Fiore, A., Fiore, A., Schlüter, A., Sczyrba, A., Maestri, E., Marmiroli, N., Neuhoff, D., Nesme, J., Sørensen, S. J., Aprea, G., Nobili, C., Presenti, O., Giovannetti, G. & 4 others, , 2021, In: Microorganisms. 9, 2, 23 p., 426.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Identification of a Catalytic Nucleophile-Activating Network in the endo-α-N-Acetylgalactosaminidase of Family GH101
Hansen, A. L., Koivisto, J. M., Simonsen, Signe, Dong, Z., Crehuet, R., Hansen, D. K. & Willemoës, Martin, 2021, In: Biochemistry. 60, 45, p. 3398-3407 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Identifying a living great-grandson of the Lakota Sioux leader Tatanka Iyotake (Sitting Bull)
Moltke, Ida, Korneliussen, Thorfinn Sand, Seguin-Orlando, A., Moreno Mayar, J. Víctor, LaPointe, E., Billeck, W. & Willerslev, Eske, 2021, In: Science Advances. 7, 44, 7 p., eabh2013.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Identifying the Binding Proteins of Small Ligands with the Differential Radial Capillary Action of Ligand Assay (DRaCALA)
Schicketanz, Muriel Leandra, Grucela, Paulina Katarzyna & ZHANG, YONG, 2021, In: Journal of visualized experiments : JoVE. 169, e62331.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ignored diversity of arbuscular mycorrhizal fungi in co-occurring mycotrophic and non-mycotrophic plants
Wang, Y., Li, Y., Li, S. & Rosendahl, Søren, 2021, In: Mycorrhiza. 31, 1, p. 93-102 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Immune challenges increase network centrality in a queenless ant
Alciatore, G., Ugelvig, Line Vej, Frank, E., Bidaux, J., Gal, A., Schmitt, T., Kronauer, D. J. C. & Ulrich, Y., 2021, In: Proceedings of the Royal Society B: Biological Sciences. 288, 1958, 9 p., 20211456.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Impact of Long-Term Organic and Mineral Fertilization on Rhizosphere Metabolites, Root–Microbial Interactions and Plant Health of Lettuce
Windisch, S., Sommermann, L., Babin, D., Chowdhury, S. P., Grosch, R., Moradtalab, N., Walker, F., Höglinger, B., El-Hasan, A., Armbruster, W., Nesme, Joseph, Sørensen, Søren Johannes, Schellenberg, I., Geistlinger, J., Smalla, K., Rothballer, M., Ludewig, U. & Neumann, G., 2021, In: Frontiers in Microbiology. 11, 26 p., 597745.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Impact of Tellurite on the Metabolism of Paenibacillus pabuli AL109b With Flagellin Production Explaining High Reduction Capacity
Farias, P., Francisco, R., Maccario, Lorrie, Herschend, J., Piedade, A. P., Sørensen, Søren Johannes & Morais, P. V., 2021, In: Frontiers in Microbiology. 12, 15 p., 718963.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Importance of microbial communities at the root-soil interface for extracellular polymeric substances and soil aggregation in semiarid grasslands
Bettermann, A., Zethof, J. H. T., Babin, D., Cammeraat, E. L. H., Solé-Benet, A., Lázaro, R., Luna, L., Nesme, Joseph, Sørensen, Søren Johannes, Kalbitz, K., Smalla, K. & Vogel, C., 2021, In: Soil Biology & Biochemistry. 159, 14 p., 108301.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Imprimer La Lumiere – 3D Printing Bioluminescence for Architectural Materiality
Thomsen, M. R., Tamke, M., Mosse, A., Sieder-semlitsch, J., Bradshaw, H., Buchwald, E. F. & Moßhammer, Maria, 2021, Proceedings of the 2021 DigitalFUTURES: The 3rd International Conference on Computational Design and Robotic Fabrication (CDRF 2021). Yuan, P. F., Chai, H., Yan, C. & Leach, N. (eds.). Springer Singapore, p. 305-315 11 p. Chapter 28Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Improved metagenome binning and assembly using deep variational autoencoders
Nissen, J. N., Johansen, Joachim, Allesoe, R. L., Sonderby, C. K., Armenteros, J. J. A., Grønbech, Christopher Heje, Jensen, Lars Juhl, Nielsen, H. B., Petersen, T. N., Winther, Ole & Rasmussen, Simon, 2021, In: Nature Biotechnology. 39, p. 555-560Research output: Contribution to journal › Journal article › Research › peer-review
- Published
In-Situ Metatranscriptomic Analyses Reveal the Metabolic Flexibility of the Thermophilic Anoxygenic Photosynthetic Bacterium Chloroflexus aggregans in a Hot Spring Cyanobacteria-Dominated Microbial Mat
Kawai, S., Martinez, J. N., Lichtenberg, Mads, Trampe, Erik, Kühl, Michael, Tank, M., Haruta, S., Nishihara, A., Hanada, S. & Thiel, V., 2021, In: Microorganisms. 9, 3, 22 p., 652.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Increased Likelihood of High Nitrous Oxide (N2O) Exchange in Soils at Reduced Microbial Diversity
Christensen, Søren, Hol, W. H. G., Kurm, V. & Vestergård, M., 2021, In: Sustainability. 13, 4, 8 p., 1685.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Increasing importance of precipitation in spring phenology with decreasing latitudes in subtropical forest area in China
Li, X., Fu, Y. H., Chen, S., Xiao, J., Yin, G., Li, X., Zhang, X., Geng, X., Wu, Z., Zhou, X., Tang, Jing & Hao, F., 2021, In: Agricultural and Forest Meteorology. 304-305, 9 p., 108427.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Indirect effects of climate change inhibit N2 fixation associated with the feathermoss Hylocomium splendens in subarctic tundra
Alvarenga, Danillo Oliveira & Rousk, Kathrin, 2021, In: Science of the Total Environment. 795, 7 p., 148676.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Indo-Danish network project 2019-2021: Arctic and alpine aquatic science – implication of climate change on proglacial freshwater ecosystem function and services. Report part II. Knowledge sharing: Book of abstracts and presentation from workshop at Bahugana Garhwal University 11th to 13th October 2019
Christoffersen, Kirsten Seestern & Perlt, Trine Warming, 2021, Department of Biology, Faculty of Science, University of Copenhagen. 151 p.Research output: Book/Report › Report › Research
- Published
Indo-Danish network project 2019-2021: Arctic and alpine aquatic science – implication of climate change on proglacial freshwater ecosystem function and services. Report part I. Program and referendum for the Danish delegations visit to India 9th to 22nd October 2019
Christoffersen, Kirsten Seestern & Perlt, Trine Warming, 2021, Department of Biology, Faculty of Science, University of Copenhagen. 25 p.Research output: Book/Report › Report › Research
- Published
Insight into Calcium-Binding Motifs of Intrinsically Disordered Proteins
Newcombe, Estella Anne, Fernandes, Catarina, Lundsgaard, J. E., Brakti, Inna, Lindorff-Larsen, Kresten, Langkilde, Annette Eva, Skriver, Karen & Kragelund, Birthe Brandt, 2021, In: Biomolecules. 11, 8, 17 p., 1173.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Intakes of Fish and Long-Chain n-3 Polyunsaturated Fatty Acid Supplements During Pregnancy and Subsequent Risk of Type 2 Diabetes in a Large Prospective Cohort Study of Norwegian Women
Øyen, J., Brantsæter, A. L., Nøstbakken, O. J., Birkeland, K. I., Haugen, M., Madsen, L. & Egeland, G. M., 2021, In: Diabetes Care. 44, 10, p. 2337-2345 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interactions between Rainbow Trout Eyed Eggs and Flavobacterium spp. Using a Bath Challenge Model: Preliminary Evaluation of Bacteriophages as Pathogen Control Agents
Donati, V. L., Dalsgaard, I., Runtuvuori-Salmela, A., Kunttu, H., Jørgensen, J., Castillo, D., Sundberg, L., Middelboe, Mathias & Madsen, L., 2021, In: Microorganisms. 9, 5, 31 p., 971.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interactions between the Prophage 919TP and Its Vibrio cholerae Host: Implications of gmd Mutation for Phage Resistance, Cell Auto-Aggregation, and Motility
Li, N., Zeng, Y., Hu, B., Zhu, T., Svenningsen, Sine Lo, Middelboe, Mathias & Tan, D., 2021, In: Viruses. 13, 12, 15 p., 2342.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interorgan communication in the control of metamorphosis
Malita, Alina & Rewitz, Kim, 2021, In: Current Opinion in Insect Science. 43, p. 54-62 9 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Interplay of folded domains and the disordered low-complexity domain in mediating hnRNPA1 phase separation
Martin, E. W., Thomasen, Emil, Milkovic, N. M., Cuneo, M. J., Grace, C. R., Nourse, A., Lindorff-Larsen, Kresten & Mittag, T., 2021, In: Nucleic Acids Research. 49, 5, p. 2931-2945 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interstitial Annelida
Worsaae, Katrine, Kerbl, A., Di Domenico, M., Gonzalez, B. C., Bekkouche, N. & Martínez, A., 2021, In: Diversity. 13, 2, 57 p., 77.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Intraspecific variation in thermal tolerance differs between tropical and temperate fishes
Nati, J. J. H., Svendsen, M. B. S., Marras, S., Killen, S. S., Steffensen, John Fleng, McKenzie, D. J. & Domenici, P., 2021, In: Scientific Reports. 11, 8 p., 21272.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Introduction to the Series on “Current Knowledge in Marine Microplastics - Pollution Down to the Nanoscale”
Posth, Nicole Rita Elisabeth & Garm, Anders Lydik, 2021, In: Biological Bulletin. 240, 1 p., 41.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Investigation of the Impact of the RNA Exosome on Cellular Transcriptome and Function
Wu, M., 2021, Department of Biology, Faculty of Science, University of Copenhagen. 154 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Ion mobility-mass spectrometry shows stepwise protein unfolding under alkaline conditions
Sahin, Cagla, Österlund, N., Leppert, A., Johansson, J., Marklund, E. G., Benesch, J. L. P., Ilag, L. L., Allison, T. M. & Landreh, M., 2021, In: Chemical Communications. 57, 12, p. 1450-1453 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Isolation, characterization, and genome assembly of Barnettozyma botsteinii sp. nov. and novel strains of Kurtzmaniella quercitrusa isolated from the intestinal tract of the termite Macrotermes bellicosus
Arrey Tané, Gerard, Li, G., Murphy, Rob, Guimaraes, L., Alizadeh, S., Poulsen, Michael & Regenberg, Birgitte, 2021, In: G3: Genes, Genomes, Genetics. 11, 12, 13 p., jkab342.Research output: Contribution to journal › Journal article › Research › peer-review
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Genetic diversity within lichen photobionts of the Lecanora varia group (Lichenes, Ascomycota)
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Long-term survival of dinoflagellate cysts in anoxic marine sediments.
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Danmarks biodiversitets fremtid: de væsentligste udfordringer og højest prioriterede virkemidler
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