Department of Biology

 

 
  1. 2023
  2. Published

    Enhanced foliar 15N enrichment with increasing nitrogen addition rates: Role of plant species and nitrogen compounds

    Wang, Y., Niu, G., Wang, R., Rousk, Kathrin, Li, A., Hasi, M., Wang, C., Xue, J., Yang, G., Lü, X., Jiang, Y., Han, X. & Huang, J., 2023, In: Global Change Biology. 29, 6, 15 p.

    Research output: Contribution to journalJournal articlepeer-review

  3. Published

    Enhancing Flood Tolerance in Wheat (Triticum aestivum) and Rice (Oryza sativa): Identifying Key Physiological Traits

    Herzog, Max, Tong, Shuai, Kjær, Johan Emil, Konnerup, D., Peralta Ogorek, Lucas León, Song, Zhiwei, Pellegrini, Elisa & Pedersen, Ole, 2023. 1 p.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  4. Published

    Environmental predictors of lake fish diversity across gradients in lake age and spatial scale

    Martinsen, Kenneth Thorø, Kristensen, E., Båstrup-Spohr, Lars, Søndergaard, M., Carl, Henrik, Jeppesen, E., Sand-Jensen, Kaj & Kragh, T., 2023, In: Freshwater Biology. 68, 7, 14 p.

    Research output: Contribution to journalJournal articlepeer-review

  5. Published

    Epigenetic Regulation of Driver Genes in Testicular Tumorigenesis

    von Eyben, F. E., Kristiansen, Karsten, Kapp, D. S., Hu, R., Preda, O. & Nogales, F. F., 2023, In: International Journal of Molecular Sciences. 24, 4, 28 p., 4148.

    Research output: Contribution to journalReviewpeer-review

  6. Published

    Epithelium dynamics differ in time and space when exposed to the permeation enhancers penetramax and EGTA. A head-to-head mechanistic comparison

    Panou, D. A., Pedersen, Stine Helene Falsig, Kristensen, Mie & Nielsen, Hanne Mørck, 2023, In: Frontiers in Drug Delivery. 3, 16 p., 1221628.

    Research output: Contribution to journalJournal articlepeer-review

  7. Published

    Erstnachweis von Jaapiella chelidonii in Deutschland und von Mayetiola hellwigi in Schleswig-Holstein (Diptera: Cecidomyiidae)

    Bruun, Hans Henrik, 2023, In: Virgo - Mitteilungsblatt des Entomologischen Vereins Mecklenburg. 26, p. 91-92 2 p.

    Research output: Contribution to journalJournal article

  8. Published

    Estimating admixture pedigrees of recent hybrids without a contiguous reference genome

    Garcia Erill, Genís, Hanghøj, Kristian Ebbesen, Heller, Rasmus, Wiuf, Carsten & Albrechtsen, Anders, 2023, In: Molecular Ecology Resources. 23, 7, p. 1604-1619 16 p.

    Research output: Contribution to journalJournal articlepeer-review

  9. Published

    Estuarine Seagrasses

    Gruber, R. K., Gurbisz, C., Borum, Jens & Kemp, W. M., 2023, Estuarine Ecology. Crump, B. C., Testa, J. M. & Dunton, K. H. (eds.). 3 ed. John/Wiley & Sons, Inc. John/Wiley & Sons Ltd., 20 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearch

  10. Published

    Evaluation of population structure inferred by principal component analysis or the admixture model

    Van Waaij, J., Li, Song, Garcia Erill, Genís, Albrechtsen, Anders & Wiuf, Carsten, 2023, In: Genetics. 225, 2, 14 p., iyad157.

    Research output: Contribution to journalJournal articlepeer-review

  11. Published

    Evaluation of the Impact of BaP Exposure on the Gut Microbiota and Allergic Responses in an OVA-Sensitized Mouse Model

    Du, B., Xiao, X., Wang, H., Li, W., Xia, Z., Yang, P., Huang, S. K., Yuan, R., Liu, J., Han, M., Zou, Y., Zhu, J., He, D., Lyu, J., Jin, X., Xu, X., Wang, J., Yang, H., Xiao, L., Liu, X. & 1 others, Kristiansen, Karsten, 2023, In: Environmental Health Perspectives. 131, 6, 15 p.

    Research output: Contribution to journalJournal articlepeer-review

  12. Published

    Every refuge has its price: Ostreobium as a model for understanding how algae can live in rock and stay in business

    Tandon, K., Pasella, M. M., Iha, C., Ricci, F., Hu, J., O'Kelly, C. J., Medina, M., Kühl, Michael & Verbruggen, H., 2023, In: Seminars in Cell and Developmental Biology. 134, p. 27-36 10 p.

    Research output: Contribution to journalReviewpeer-review

  13. Published

    Evidence for early domestic yak, taurine cattle, and their hybrids on the Tibetan Plateau

    Chen, N., Zhang, Z., Hou, J., Chen, J., Gao, X., Tang, L., Wangdue, S., Zhang, X., Sinding, Mikkel Holger Strander, Liu, X., Han, J., Lü, H., Lei, C., Marshall, F. & Liu, X., 2023, In: Science Advances. 9, 50, 13 p., eadi6857.

    Research output: Contribution to journalJournal articlepeer-review

  14. Published

    Evidence that the domesticated fungus Leucoagaricus gongylophorus recycles its cytoplasmic contents as nutritional rewards to feed its leafcutter ant farmers

    A. Leal-Dutra, Caio, Yuen, L. M., Guedes, B. A. M., Contreras Serrano, Marta, Marques, P. E. & Shik, Jonathan Z., 2023, In: IMA Fungus. 14, 1, 13 p., 19.

    Research output: Contribution to journalJournal articlepeer-review

  15. Published

    Evolution of Bilateria from a Meiofauna Perspective—Miniaturization in the Focus

    Worsaae, Katrine, Vinther, J. & Sørensen, Martin Vinther, 2023, New Horizons in Meiobenthos Research: Profiles, Patterns and Potentials. 1 ed. Springer, Cham, p. 1-31 31 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearch

  16. Published

    Evolution of the germline mutation rate across vertebrates

    Bergeron, Lucie Adrienne, Besenbacher, S., Zheng, J., Li, P., Bertelsen, Mads Frost, Quintard, B., Hoffman, J. I., Li, Z., Leger, J. S., Shao, C., Stiller, Josefin, Gilbert, M Thomas P, Schierup, M. H. & KU, thw266, 2023, In: Nature. 615, p. 285-291

    Research output: Contribution to journalJournal articlepeer-review

  17. Published

    Evolutionary fine-tuning of residual helix structure in disordered proteins manifests in complex structure and lifetime

    Elkjær, Steffie Martina H, Due, A. D., Christensen, L. F., Theisen, Frederik Friis, Staby, L., Kragelund, Birthe Brandt & Skriver, Karen, 2023, In: Communications Biology . 6, 11 p., 63.

    Research output: Contribution to journalJournal articlepeer-review

  18. Published

    Examination of the Regulation and Function of TopBP1 during Mitotic DNA Repair

    Bagge, J., 2023, Department of Biology, Faculty of Science, University of Copenhagen. 124 p.

    Research output: Book/ReportPh.D. thesis

  19. Published

    Expanding known viral diversity in the healthy infant gut

    Shah, S. A., Deng, L., Thorsen, J., Pedersen, A. G., Dion, M. B., Castro-Mejía, J. L., Silins, R., Romme, F. O., Sausset, R., Jessen, L. E., Ndela, E. O., Hjelmsø, M., Rasmussen, M. A., Redgwell, T. A., Rodríguez, C. L., Vestergaard, G., Zhang, Y., Chawes, B., Bønnelykke, K., Sørensen, S. J. & 6 others, Bisgaard, H., Enault, F., Stokholm, Jakob, Moineau, S., Petit, M. A. & Nielsen, Dennis Sandris, 2023, In: Nature Microbiology. 8, p. 986–998

    Research output: Contribution to journalJournal articlepeer-review

  20. Published

    Expanding the Echinoderes coulli group (Kinorhyncha Cyclorhagida) with a new species from the Chuuk Islands, Micronesia

    Herranz, Maria, Moreleon, A. D., Rho, H. S. & Sørensen, Martin Vinther, 2023, In: Zoologischer Anzeiger. 302, p. 67-74 8 p.

    Research output: Contribution to journalJournal articlepeer-review

  21. Published

    Expanding the enzymatic toolbox for O-glycan analysis: Engineering endo-α-N-acetylgalactosaminidase for processing of complex O-glycans

    Hansen, A. L., 2023, Department of Biology, Faculty of Science, University of Copenhagen. 118 p.

    Research output: Book/ReportPh.D. thesis

  22. Published

    Explainable Image Quality Assessments in Teledermatological Photography

    Jalaboi, R., Winther, Ole & Galimzianova, A., 2023, In: Telemedicine and e-Health. 29, 9, p. 1342-1348 7 p.

    Research output: Contribution to journalJournal articlepeer-review

  23. Published

    Exploring antidepressant treatment response using biological and clinical measurements

    Nøhr, A. K., 2023, Department of Biology, Faculty of Science, University of Copenhagen. 125 p.

    Research output: Book/ReportPh.D. thesis

  24. Published

    Exploring regulation of untranslated RNAs in Escherichia coli: From the well-defined tRNAs to the evolving field of sRNAs

    Heidemann, Ditte Fogh, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 154 p.

    Research output: Book/ReportPh.D. thesis

  25. Published

    Expression of genes and enzymes involved in ovarian steroidogenesis in relation to human follicular development

    Zheng, M., tcg964, tcg964, Rasmussen, F. R., Cadenas, J., Christensen, Søren Tvorup & Mamsen, L. S., 2023, In: Frontiers in Endocrinology. 14, 17 p., 1268248.

    Research output: Contribution to journalJournal articlepeer-review

  26. Published

    Extracting DNA from soil or directly from isolated nematodes indicate dissimilar community structure for Europe-wide forest soils

    Donhauser, J., Briones, M. J. I., Mikola, J., Jones, D. L., Eder, R., Filser, J., Frossard, A., Krogh, P. H., Sousa, J. P., Cortet, J., Desie, E., Domene, X., Djuric, S., Hackenberger, D., Jimenez, J. J., Iamandei, M., Rissmann, C., Schmidt, O., Shanskiy, M., Silfver, T. & 4 others, Vancampenhout, K., Vasutova, M., Velizarova, E. & Frey, B., 2023, In: Soil Biology and Biochemistry. 185, 16 p., 109154.

    Research output: Contribution to journalJournal articlepeer-review

  27. Published

    FISH-KILLING MARINE ALGAL BLOOMS: Causative Organisms, Ichthyotoxic Mechanisms, Impacts and Mitigation

    Hallegraeff, G., Anderson, D. M., Davidson, K., Gianella , F., Hansen, Per Juel, Iwataki, M., Larsen, T. O., Hegaret, H., Mardones, J. I., MacKenzie, L. & Rensel, J. E., 2023, Unesco. 96 p.

    Research output: Book/ReportReport

  28. Published

    FK506-Binding Protein 2 Participates in Proinsulin Folding

    Hoefner, C., Bryde, T. H., Pihl, C., Tiedemann, S. N., Bresson, S. E., Hotiana, H. A., Khilji, M. S., Santos, T. D., Puglia, M., Pisano, P., Majewska, M., Durzynska, J., Klindt, K., Klusek, J., Perone, M. J., Bucki, R., Hägglund, P. M., Gourdon, P. E., Gotfryd, K., Urbaniak, E. & 5 others, Borowiak, M., Wierer, M., MacDonald, P. E., Mandrup-Poulsen, Thomas & Marzec, Michal Tomasz, 2023, In: Biomolecules. 13, 1, 20 p., 152.

    Research output: Contribution to journalJournal articlepeer-review

  29. Published

    Fast and accurate out-of-core PCA framework for large scale biobank data

    Li, Z., Meisner, Jonas & Albrechtsen, Anders, 2023, In: Genome Research. 33, 9, p. 1599-1608 10 p.

    Research output: Contribution to journalJournal articlepeer-review

  30. Published

    Fine-scale mapping of physicochemical and microbial landscapes of the coral skeleton

    Ricci, F., Tandon, K., Moßhammer, Maria, Cho, E. H. J., Blackall, L. L., Kühl, Michael & Verbruggen, H., 2023, In: Environmental Microbiology. 25, 8, p. 1505-1521 17 p.

    Research output: Contribution to journalJournal articlepeer-review

  31. Published

    Fission yeast Swi2 designates cell-type specific donor and stimulates Rad51-driven strand exchange for mating-type switching

    Maki, T., Thon, Genevieve & Iwasaki, H., 2023, In: Nucleic acids symposium series. 51, 8, 19 p.

    Research output: Contribution to journalJournal articlepeer-review

  32. Published

    Flock social behaviour and vocal communication in Eupsittula conures

    Thomsen, Heidi Maria, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 195 p.

    Research output: Book/ReportPh.D. thesis

  33. Published

    Flood-tolerant rice for enhanced production and livelihood of smallholder farmers of Africa

    Mwakyusa, L., Dixit, S., Herzog, Max, Heredia, M. C., Madege, R. R. & Kilasi, N. L., 2023, In: Frontiers in Sustainable Food Systems. 7, 13 p., 1244460.

    Research output: Contribution to journalReviewpeer-review

  34. Published

    Floods stress in lowland rice production: experiences of rice farmers in Kilombero and Lower-Rufiji floodplains, Tanzania

    Sulle Michael, P., Mwakyusa, L., G. Sanga, H., J. Shitindi, M., Kwaslema, D. R., Herzog, Max, L. Meliyo, J. & Massawe, B. H. J., 2023, In: Frontiers in Sustainable Food Systems. 7, 18 p., 1206754.

    Research output: Contribution to journalJournal articlepeer-review

  35. Published

    Folding of heterologous proteins in bacterial cell factories: Cellular mechanisms and engineering strategies

    Rong, Y., Jensen, S. I., Lindorff-Larsen, Kresten & Nielsen, A. T., 2023, In: Biotechnology Advances. 63, 21 p., 108079.

    Research output: Contribution to journalReviewpeer-review

  36. Published

    Forest buffer-strips mitigate the negative impact of oil palm plantations on stream communities

    Rojas-castillo, O. A., Kepfer Rojas, Sebastian, Vargas, N. & Jacobsen, Dean, 2023, In: Science of the Total Environment. 873, 12 p., 162259.

    Research output: Contribution to journalJournal articlepeer-review

  37. Published

    Four additional natural 7-deazaguanine derivatives in phages and how to make them

    Cui, L., Balamkundu, S., Liu, C. F., Ye, H., Hourihan, J., Rausch, A., Hauß, C., Nilsson, E., Hoetzinger, M., Holmfeldt, K., Zhang, W., Martinez-Alvarez, L., Peng, X., Tremblay, D., Moinau, S., Solonenko, N., Sullivan, M. B., Lee, Y. J., Mulholland, A., Weigele, P. R. & 3 others, de Crécy-Lagard, V., Dedon, P. C. & Hutinet, G., 2023, In: Nucleic Acids Research. 51, 17, p. 9214-9226 13 p.

    Research output: Contribution to journalJournal articlepeer-review

  38. Published

    Full activation of thermogenesis in brown adipocytes requires Basigin action

    Rupar, K., Isidor, Marie Sophie, Argemi Muntadas, Lidia, Agueda Oyarzabal, Marina, Plucinska, Kaja, Brown, E. L., Mattanovich, M., Bossi, Simone, Tozzi, M., Tandio, David, Petersen, P. S. S., Henriksen, T. I., Trošt, K., Hansen, Jacob B., Gerhart-Hines, Zach, Nielsen, S., Moritz, Thomas & Emanuelli, Brice, 2023, In: F E B S Journal. 290, 10, p. 2673-2691

    Research output: Contribution to journalJournal articlepeer-review

  39. Published

    Functions of m6A-YTH modules in plants: Lessons from high-throughput sequencing analyses

    Porcelli, C., 2023, Department of Biology, Faculty of Science, University of Copenhagen. 178 p.

    Research output: Book/ReportPh.D. thesis

  40. Published

    Fungi and bacteria in the beds of rural and urban infants correlate with later risk of atopic diseases

    Lehtimäki, J., Gupta, S., Hjelmsø, M., Shah, S., Thorsen, Jonathan Jan Ilve, Rasmussen, Morten Arendt, Soverini, M., Li, X., Russel, J., Trivedi, Urvish, Brix, S., Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard, Bisgaard, H., Sørensen, Søren Johannes & Stokholm, Jakob, 2023, In: Clinical and Experimental Allergy. 53, 12, p. 1268-1278 11 p.

    Research output: Contribution to journalJournal articlepeer-review

  41. Published

    GDF15 increases insulin action in the liver and adipose tissue via a β-adrenergic receptor-mediated mechanism

    Sjøberg, K. A., Sigvardsen, Casper Møller, Alvarado-Diaz, A., Andersen, Nicoline Resen, Larance, M., Seeley, R. J., Schjerling, Peter, Knudsen, Jakob Grunnet, Katzilieris Petras, Georgios, Clemmensen, Christoffer, Jørgensen, S. B., De Bock, K. & Richter, Erik A., 2023, In: Cell Metabolism. 35, 8, p. 1327-1340.e5 19 p.

    Research output: Contribution to journalJournal articlepeer-review

  42. Published

    Genes with epigenetic alterations in human pancreatic islets impact mitochondrial function, insulin secretion, and type 2 diabetes

    Rönn, T., Ofori, J. K., Perfilyev, A., Hamilton, Alexander, Pircs, K., Eichelmann, F., Garcia-Calzon, S., Karagiannopoulos, A., Stenlund, H., Wendt, A., Volkov, P., Schulze, M. B., Mulder, H., Eliasson, L., Ruhrmann, S., Bacos, K. & Ling, C., 2023, In: Nature Communications. 14, 1, 21 p., 8040.

    Research output: Contribution to journalJournal articlepeer-review

  43. Published

    Genetic Loss of Sucrase-Isomaltase Function: Mechanisms, Implications, and Future Perspectives

    Senftleber, N. K., Ramne, Stina, Moltke, Ida, Jørgensen, M. E., Albrechtsen, Anders, Hansen, Torben & Lepola, Mette Andersen, 2023, In: Application of Clinical Genetics. 16, p. 31-39 9 p.

    Research output: Contribution to journalReviewpeer-review

  44. Published

    Genetics as a novel tool in mining impact assessment and biomonitoring of critically endangered western chimpanzees in the Nimba Mountains, Guinea

    Koops, K., Humle, T., Frandsen, P., Fitzgerald, M., D'Auvergne, L., Jackson, H. A., Børsting, Claus, Siegismund, Hans Redlef, Soumah, A. G. & Hvilsom, C., 2023, In: Conservation Science and Practice. 5, 4, 17 p., e12898.

    Research output: Contribution to journalJournal articlepeer-review

  45. Published

    Genome mining for macrolactam-encoding gene clusters allowed for the network-guided isolation of β-amino acid-containing cyclic derivatives and heterologous production of ciromicin A

    Seibel, E., Um, S., Dayras, M., Bodawatta, Kasun Harshana, de Kruijff, M., Jønsson, Knud Andreas, Poulsen, Michael, Kim, K. H. & Beemelmanns, C., 2023, In: Communications Chemistry. 6, 15 p., 257.

    Research output: Contribution to journalJournal articlepeer-review

  46. Published

    Genome sequence and genomic analysis of liver abscess caused by hypervirulent Klebsiella pneumoniae

    Pei, N., Liu, X., Jian, Z., Yan, Q., Liu, Q., Kristiansen, Karsten, Li, J. & Liu, W., 2023, In: 3 Biotech. 13, 3, 7 p., 76.

    Research output: Contribution to journalJournal articlepeer-review

  47. Published

    Genome-wide characterization of extrachromosomal circular DNA in gastric cancer and its potential role in carcinogenesis and cancer progression

    Jiang, X., Pan, Xiaoguang, Li, W., Han, Peng, Yu, J., Li, J., Zhang, H., Lv, W., Zhang, Y., He, Y. & Xiang, X., 2023, In: Cellular and Molecular Life Sciences. 80, 7, 18 p., 191.

    Research output: Contribution to journalJournal articlepeer-review

  48. Published

    Genomic diversity and differentiation between island and mainland populations of white-tailed eagles (Haliaeetus albicilla)

    Hansen, C. C. R., Láruson, Á. J., Rasmussen, Jacob Agerbo, Ballesteros, J. A. C., Sinding, Mikkel Holger Strander, Hallgrimsson, G. T., von Schmalensee, M., Stefansson, R. A., Skarphédinsson, K. H., Labansen, A. L., Leivits, M., Sonne, C., Dietz, R., Skelmose, K., Boertmann, D., Eulaers, I., Martin, M. D., Helgason, A. S., Gilbert, M Thomas P & Pálsson, S., 2023, In: Molecular Ecology. 32, 8, p. 1925-1942 18 p.

    Research output: Contribution to journalJournal articlepeer-review

  49. Published

    Genomics of adaptive evolution in the woolly mammoth

    Díez-del-Molino, D., Dehasque, M., Chacón-Duque, J. C., Chrzanová Pecnerová, Patrícia, Tikhonov, A., Protopopov, A., Plotnikov, V., Kanellidou, F., Nikolskiy, P., Mortensen, P., Danilov, G. K., Vartanyan, S., Gilbert, M Thomas P, Lister, A. M., Heintzman, P. D., van der Valk, T. & Dalén, L., 2023, In: Current Biology. 33, 9, 17 p.

    Research output: Contribution to journalJournal articlepeer-review

  50. Published

    Genotypic variations and interspecific interactions modify gene expression and biofilm formation of Xanthomonas retroflexus

    Jacquiod, S., Olsen, N. M. C., Blouin, M., Røder, Henriette Lyng & Burmølle, Mette, 2023, In: Environmental Microbiology. 25, 12, 3225-3238.

    Research output: Contribution to journalJournal articlepeer-review

  51. Published

    Geochemical landscapes as drivers of wildlife reproductive success: Insights from a high-Arctic ecosystem

    van Beest, F. M., Schmidt, N. M., Stewart, L., Hansen, L. H., Michelsen, Anders, Mosbacher, J. B., Gilbert, H., Le Roux, G. & Hansson, S. V., 2023, In: Science of the Total Environment. 903, 12 p., 166567.

    Research output: Contribution to journalJournal articlepeer-review

  52. Published

    Glacial meltwater and seasonality influence community composition of diazotrophs in Arctic coastal and open waters

    Winberg von Friesen, Lisa, Paulsen, M. L., Müller, O., Gründger, F. & Riemann, Lasse, 2023, In: F E M S Microbiology Ecology. 99, 8, 14 p.

    Research output: Contribution to journalJournal articlepeer-review

  53. Published

    Global analysis of multi-mutants to improve protein function

    Johansson, Kristoffer Enøe, Lindorff-Larsen, Kresten & Winther, Jakob R., 2023, In: Journal of Molecular Biology. 435, 8, 15 p., 168034.

    Research output: Contribution to journalJournal articlepeer-review

  54. Published

    Global beta-diversity of angiosperm trees is shaped by Quaternary climate change

    Xu, W. B., Guo, W. Y., Serra-Diaz, J. M., Schrodt, F., Eiserhardt, W. L., Enquist, B. J., Maitner, B. S., Merow, C., Violle, C., Anand, M., Belluau, M., Bruun, H. H., Byun, C., Catford, J. A., Cerabolini, B. E. L., Chacón-Madrigal, E., Ciccarelli, D., Cornelissen, J. H. C., Dang-Le, A. T., de Frutos, A. & 39 others, Dias, A. S., Giroldo, A. B., Gutiérrez, A. G., Hattingh, W., He, T., Hietz, P., Hough-Snee, N., Jansen, S., Kattge, J., Komac, B., Kraft, N. J. B., Kramer, K., Lavorel, S., Lusk, C. H., Martin, A. R., Ma, K. P., Mencuccini, M., Michaletz, S. T., Minden, V., Mori, A. S., Niinemets, Ü., Onoda, Y., Onstein, R. E., Peñuelas, J., Pillar, V. D., Pisek, J., Pound, M. J., Robroek, B. J. M., Schamp, B., Slot, M., Sun, M., Sosinski, Ê. E., Soudzilovskaia, N. A., Thiffault, N., van Bodegom, P. M., van der Plas, F., Zheng, J., Svenning, J. C. & Ordonez, A., 2023, In: Science Advances. 9, 14, 19 p., eadd8553.

    Research output: Contribution to journalJournal articlepeer-review

  55. Published

    Global determinants of insect mitochondrial genetic diversity

    French, C. M., Bertola, Laura, Carnaval, A. C., Economo, E. P., Kass, J. M., Lohman, D. J., Marske, K. A., Meier, R., Overcast, I., Rominger, A. J., Staniczenko, P. P. A. & Hickerson, M. J., 2023, In: Nature Communications. 14, 1, 15 p., 5276.

    Research output: Contribution to journalJournal articlepeer-review

  56. Published

    Global dispersal and adaptive evolution of domestic cattle: a genomic perspective

    Xia, X., Qu, K., Wang, Y., Sinding, Mikkel Holger Strander, Wang, F., Hanif, Q., Ahmed, Z., Lenstra, J. A., Han, J., Lei, C. & Chen, N., 2023, In: Stress Biology. 3, 1, 13 p., 8.

    Research output: Contribution to journalReviewpeer-review

  57. Published

    Global genetic diversity, introgression, and evolutionary adaptation of indicine cattle revealed by whole genome sequencing

    Chen, N., Xia, X., Hanif, Q., Zhang, F., Dang, R., Huang, B., Lyu, Y., Luo, X., Zhang, H., Yan, H., Wang, S., Wang, F., Chen, J., Guan, X., Liu, Y., Li, S., Jin, L., Wang, P., Sun, L., Zhang, J. & 37 others, Liu, J., Qu, K., Cao, Y., Sun, J., Liao, Y., Xiao, Z., Cai, M., Mu, L., Siddiki, A. Z., Asif, M., Mansoor, S., Babar, M. E., Hussain, T., Silva, G. L. L. P., Gorkhali, N. A., Terefe, E., Belay, G., Tijjani, A., Zegeye, T., Gebre, M. G., Ma, Y., Wang, Y., Huang, Y., Lan, X., Chen, H., Migliore, N. R., Colombo, G., Semino, O., Achilli, A., Sinding, Mikkel Holger Strander, Lenstra, J. A., Cheng, H., Lu, W., Hanotte, O., Han, J., Jiang, Y. & Lei, C., 2023, In: Nature Communications. 14, 1, 13 p., 7803.

    Research output: Contribution to journalJournal articlepeer-review

  58. Published

    Global oceanic diazotroph database version 2 and elevated estimate of global oceanic N2 fixation

    Shao, Z., Xu, Y., Wang, H., Luo, W., Wang, L., Huang, Y., Agawin, N. S. R., Ahmed, A., Benavides, M., Bentzon-Tilia, M., Berman-Frank, I., Berthelot, H., C. Biegala, I., B. Bif, M., Bode, A., Bonnet, S., A. Bronk, D., Brown, M. V., Campbell, L., G. Capone, D. & 77 others, J. Carpenter, E., Cassar, N., X. Chang, B., Chappell, D., Lee Chen, Y., Church, M. J., M. Cornejo-Castillo, F., Sacilotto Detoni, A. M., C. Doney, S., Dupouy, C., Estrada, M., Fernandez, C., Fernández-Castro, B., Fonseca-Batista, D., Foster, R. A., Furuya, K., Garcia, N., Goto, K., Gago, J., R. Gradoville, M., Hamersley, M. R., A. Henke, B., Hörstmann, C., Jayakumar, A., Jiang, Z., Kao, S., Karl, D. M., R. Kittu, L., N. Knapp, A., Kumar, S., LaRoche, J., Liu, H., Liu, J., Lory, C., Loscher, C. R., Marañón, E., F. Messer, L., M. Mills, M., Mohr, W., Moisander, P. H., Mahaffey, C., Moore, R., Mouriño-Carballido, B., R. Mulholland, M., Nakaoka, S., A. Needoba, J., J. Raes, E., Rahav, E., Ramírez-Cárdenas, T., Reeder, C. F., Riemann, Lasse, Riou, V., Robidart, J. C., V. S. S. Sarma, V., Sato, T., Saxena, H., Selden, C., Seymour, J. R., Shi, D., Shiozaki, T., Singh, A., E. Sipler, R., Sun, J., Suzuki, K., Takahasi, K., Tan, Y., Tang, W., Tremblay, J., Turk-Kubo, K., Wen, Z., White, A. E., Wilson, S. T., Yoshida, T., Zehr, J. P., Zhang, R., Zhang, Y. & Luo, Y., 2023, In: Earth System Science Data. 15, 8, p. 3673-3709 37 p.

    Research output: Contribution to journalJournal articlepeer-review

  59. Published

    Global online trade in primates for pets

    Nijman, V., Morcatty, T. Q., El Bizri, H. R., Al-Razi, H., Ang, A., Ardiansyah, A., Atoussi, S., Bergin, D., Bell, S., Braga-Pereira, F., Campera, M., Das, N., Silva, F. E., Feddema, K., Foreman, G., Fourage, A., Gnanaolivu, S. D., Hansen, M. F., Račevska, E., Rapone, B. C. & 13 others, Regmi, G. R., Shepherd, C. R., Shukhova, S., Siriwat, P., Smith, J. H., Mir Mohamad Tabar, S. A., Tavares, A. S., Weldon, A. V., Wilson, A., Yamaguchi, N., Zhang, M., Svensson, M. S. & Anne-Isola Nekaris, K., 2023, In: Environmental Development. 48, 15 p., 100925.

    Research output: Contribution to journalJournal articlepeer-review

  60. Published

    Global warming is increasing the discrepancy between green (actual) and thermal (potential) seasons of temperate trees

    Fu, Y. H., Geng, X., Chen, S., Wu, H., Hao, F., Zhang, X., Wu, Z., Zhang, J., Tang, Jing, Vitasse, Y., Zohner, C. M., Janssens, I., Stenseth, N. C. & Penuelas, J., 2023, In: Global Change Biology. 29, 5, 13 p.

    Research output: Contribution to journalJournal articlepeer-review

  61. Published

    Glucose Controls Glucagon Secretion by Regulating Fatty Acid Oxidation in Pancreatic α-Cells

    Armour, Sarah Louise, Frueh, A., Chibalina, M. V., Dou, H., Argemi Muntadas, Lidia, Hamilton, Alexander, Katzilieris Petras, Georgios, Carmeliet, P., Davies, B., Moritz, Thomas, Eliasson, L., Rorsman, P. & Knudsen, Jakob Grunnet, 2023, In: Diabetes. 72, 10, p. 1446-1459 14 p.

    Research output: Contribution to journalJournal articlepeer-review

  62. Published

    Graph neural network interatomic potential ensembles with calibrated aleatoric and epistemic uncertainty on energy and forces

    Busk, J., Schmidt, M. N., Winther, Ole, Vegge, T. & Jørgensen, P. B., 2023, In: Physical Chemistry Chemical Physics. 25, p. 25828-25837 10 p.

    Research output: Contribution to journalJournal articlepeer-review

  63. Published

    GraphPart: homology partitioning for biological sequence analysis

    Teufel, Felix Georg, Gíslason, M. H., Almagro Armenteros, J. J., Johansen, A. R., Winther, Ole & Nielsen, H., 2023, In: NAR Genomics and Bioinformatics. 5, 4, 9 p., lqad088.

    Research output: Contribution to journalJournal articlepeer-review

  64. Published

    Grazing by semi-feral cattle and horses supports plant species richness and uniqueness in grasslands

    Bonavent, C., Olsen, K., Ejrnaes, R., Flojgaard, C., Hansen, M. D. D., Normand, S., Svenning, J. & Bruun, Hans Henrik, 2023, In: Applied Vegetation Science. 26, 1, 12 p., e12718.

    Research output: Contribution to journalJournal articlepeer-review

  65. Published

    Green waste and sewage sludge feeding ratio alters co-composting performance: Emphasis on the role of bacterial community during humification

    Zhang, Z., Duan, C., Liu, Y., Li, A., Hu, X., Chen, J., Zhang, S., Li, X., Che, R., Li, S., Ekelund, Flemming & Cui, X., 2023, In: Bioresource Technology. 380, 10 p., 129014.

    Research output: Contribution to journalJournal articlepeer-review

  66. Published

    HSP70-binding motifs function as protein quality control degrons

    Abildgaard, A. B., Voutsinos, Vasileios, Petersen, S. D., Larsen, Fia Brunsgaard Valsted, Kampmeyer, Caroline, Johansson, Kristoffer Enøe, Stein, Amelie, Ravid, T., Andréasson, C., Jensen, M. K., Lindorff-Larsen, Kresten & Hartmann-Petersen, Rasmus, 2023, In: Cellular and Molecular Life Sciences. 80, 1, 17 p., 32.

    Research output: Contribution to journalJournal articlepeer-review

  67. Published

    Harvesting the fruits of the first stage of the Primate Genome Project

    Guo, Y. T., Shao, Y., Bi, X., Zhang, B. L., Wu, H., Zhou, Y., Li, M. L., Yu, L., KU, thw266, Wu, D. D. & Qi, X. G., 2023, In: Zoological research. 44, 4, p. 725-728 4 p.

    Research output: Contribution to journalJournal articlepeer-review

  68. Published

    Hepatic PGC-1α has minor regulatory effect on the liver transcriptome and metabolome during high fat high fructose diet and exercise training

    Rasmussen, M. K., Thøgersen, R., Horsbøl Lindholm, P., Bertram, H. C. & Pilegaard, Henriette, 2023, In: Gene. 851, 14 p., 147039.

    Research output: Contribution to journalJournal articlepeer-review

  69. Published

    Hepatitis C virus RNA is 5'-capped with flavin adenine dinucleotide

    Sherwood, A. V., Rivera-Rangel, L. R., Ryberg, L. A., Larsen, H. S., Anker, K. M., Costa, R., Vågbø, C. B., Jakljevič, E., Pham, L. V., Fernandez-Antunez, C., Indrisiunaite, G., Podolska-Charlery, A., Grothen, J. E. R., Langvad, N. W., Fossat, N., Offersgaard, A., Al-Chaer, A., Nielsen, L., Kuśnierczyk, A., Sølund, C. & 8 others, Weis, Nina, Gottwein, Judith Margarete, Holmbeck, Kenn, Bottaro, S., Ramirez Almeida, Santseharay, Bukh, Jens, Scheel, Troels Kasper Høyer & Vinther, Jeppe, 2023, In: Nature. 619, p. 811-818

    Research output: Contribution to journalJournal articlepeer-review

  70. Published

    Herbivore-shrub interactions influence ecosystem respiration and biogenic volatile organic compound composition in the subarctic

    Brachmann, C. G., Vowles, T., Rinnan, Riikka, Björkman, M. P., Ekberg, A. & Björk, R. G., 2023, In: Biogeosciences. 20, 19, p. 4069-4086 18 p.

    Research output: Contribution to journalJournal articlepeer-review

  71. Published

    Heterogeneous vasomotor responses in segments from Göttingen Minipigs coronary, cerebral, and mesenteric artery: A comparative study

    Nielsen, Anette Sams, Haanes, Kristian Agmund, Holm, A., Kazantzi, Spyridoula, Mikkelsen, L. F., Edvinsson, L., Brain, S. & Sheykhzade, Majid, 2023, In: Vascular Pharmacology. 153, 107231.

    Research output: Contribution to journalJournal articlepeer-review

  72. Published

    High nutrient loads hinder successful restoration of natural habitats in freshwater wetlands

    Moeslund, J. E., Andersen, D. K., Brunbjerg, A. K., Bruun, Hans Henrik, Fløjgaard, C., McQueen, S. N., Nygaard, B. & Ejrnæs, R., 2023, In: Restoration Ecology. 31, 7, 13 p., e13796.

    Research output: Contribution to journalJournal articlepeer-review

  73. Published

    High-latitude vegetation changes will determine future plant volatile impacts on atmospheric organic aerosols

    Tang, Jing, Zhou, P., Miller, P. A., Schurgers, Guy, Gustafson, A., Makkonen, R., Fu, Y. H. & Rinnan, Riikka, 2023, In: npj Climate and Atmospheric Science. 6, 1, 13 p., 147.

    Research output: Contribution to journalJournal articlepeer-review

  74. Published

    High-resolution crystal structure of the Mu8.1 conotoxin from Conus mucronatus

    Müller, E., Hackney, Celeste Menuet, Ellgaard, Lars & Morth, J. P., 2023, In: Acta crystallographica. Section F, Structural biology communications. 79, 9, p. 240-246 7 p.

    Research output: Contribution to journalJournal articlepeer-review

  75. Published

    High-resolution single-molecule long-fragment rRNA gene amplicon sequencing of bacterial and eukaryotic microbial communities

    Fang, Chao, Sun, X., Fan, F., Zhang, X., Wang, O., Zheng, Haotian, Peng, Z., Luo, X., CHEN, Ao, Zhang, W., Drmanac, R., Peters, B. A., Song, Z. & Kristiansen, Karsten, 2023, In: Cell Reports Methods. 3, 3, 16 p., 100437.

    Research output: Contribution to journalJournal articlepeer-review

  76. Published

    Historic Sampling of a Vanishing Beast: Population Structure and Diversity in the Black Rhinoceros

    Sánchez-Barreiro, F., Westbury, Binia De Cahsan, Westbury, Michael Vincent, Sun, Xin, Margaryan, Ashot, Fontsere, Claudia, Bruford, M. W., Russo, I. M., Kalthoff, D. C., Sicheritz-Pontén, Thomas, Petersen, Bent, Dalén, L., KU, thw266, Marquès-Bonet, T., Gilbert, M Thomas P & Moodley, Y., 2023, In: Molecular Biology and Evolution. 40, 9, 19 p., msad180.

    Research output: Contribution to journalJournal articlepeer-review

  77. Published

    Horse vocal communication: Investigating the function and production mechanisms of biphonation

    Lefevre, R. A., 2023, Department of Biology, Faculty of Science, University of Copenhagen. 208 p.

    Research output: Book/ReportPh.D. thesis

  78. Published

    How genomics can help biodiversity conservation

    The European Reference Genome Atlas Consortium, T. E. R. G. A. C., 2023, In: Trends in Genetics. 39, 7, 15 p.

    Research output: Contribution to journalReviewpeer-review

  79. Published

    How protons pave the way to aggressive cancers

    Swietach, P., Boedtkjer, E. & Pedersen, Stine Helene Falsig, 2023, In: Nature Reviews Cancer. 23, p. 825-841 17 p.

    Research output: Contribution to journalReviewpeer-review

  80. Published

    Human epidermal growth factor receptor 2 status in urothelial bladder carcinoma: Frequency, genomic patterns and clinical significance

    Yu, T., Tao, H., Lv, W., Liang, N., Cui, X., Sui, X., Pan, Y., Wu, S., Xiang, C., Li, Y., Zeng, Y., Li, Conghui, Wang, F., Han, Peng, Wang, W., Yu, G. & Lin, C., 2023, In: Clinical and Translational Discovery. 3, 5, 4 p., e245.

    Research output: Contribution to journalComment/debatepeer-review

  81. Published

    Hydrostatic pressure induces transformations in the organic matter and microbial community composition of marine snow particles

    Stief, P., Schauberger, C., Becker, K. W., Elvert, M., Balmonte, J. P., Franco-Cisterna, B., Middelboe, Mathias & Glud, R. N., 2023, In: Communications Earth and Environment. 4, 1, 14 p., 377.

    Research output: Contribution to journalJournal articlepeer-review

  82. Published

    Identification and functional analysis of circulating extrachromosomal circular DNA in schizophrenia implicate its negative effect on the disorder

    Xiang, X., Pan, Xiaoguang, Lv, W., Chen, S., Li, J., Zhang, H., Liao, Y., Yu, J., Li, J., Dang, Y., You, Z., Wang, L., Chen, W., Han, Peng & Tang, J., 2023, In: Clinical and Translational Medicine. 13, 11, 7 p.

    Research output: Contribution to journalComment/debatepeer-review

  83. Published

    Identifying the genetic causes of phenotypically diagnosed Pakistani mucopolysaccharidoses patients by whole genome sequencing

    Gul, Rutaba, Firasat, S., Schubert, Mikkel, Ullah, A., Peña, E., Thuesen, Anne Cathrine Baun, Hussain, M., Stæger, Frederik Filip Vinggaard, Gjesing, A. P., Albrechtsen, Anders & Hansen, Torben, 2023, In: Frontiers in Genetics. 14, 13 p., 1128850.

    Research output: Contribution to journalJournal articlepeer-review

  84. Published

    IgG and IgM cooperate in coating of intestinal bacteria in IgA deficiency

    Eriksen, C., Moll, J. M., Myers, P. N., Pinto, A. R. A., Danneskiold-Samsøe, Niels Banhos, Dehli, R. I., Rosholm, L. B., Dalgaard, M. D., Penders, J., Jonkers, D. M., Pan-Hammarström, Q., Hammarström, L., Kristiansen, Karsten & Brix, Susanne, 2023, In: Nature Communications. 14, 1, 12 p., 8124.

    Research output: Contribution to journalJournal articlepeer-review

  85. Published

    Impact of Aging and Lifelong Exercise Training on Mitochondrial Function and Network Connectivity in Human Skeletal Muscle

    Jørgensen, Stine Ringholm, Gudiksen, Anders, Halling, J. F., Qoqaj, A., Rasmussen, P. M., Prats Gavalda, Clara, Plomgaard, Peter Stendahl & Pilegaard, Henriette, 2023, In: Journals of Gerontology. Series A: Biological Sciences & Medical Sciences. 78, 3, 11 p.

    Research output: Contribution to journalJournal articlepeer-review

  86. Published

    Impact of Holocene environmental change on the evolutionary ecology of an Arctic top predator

    Westbury, Michael Vincent, Brown, S. C., Lorenzen, J., O'Neill, S., Scott, M. B., McCuaig, J., Cheung, C., Armstrong, E., Valdes, P. J., Castruita, J. A. S., Cabrera, Andrea A., Blom, Stine Keibel, Dietz, R., Sonne, C., Louis, Marie Georgette Yolande J, Galatius, A., Fordham, D. A., dos Santos Ribeiro, Sofia Isabel, Szpak, P. & Lorenzen, Eline, 2023, In: Science Advances. 9, 45, 12 p., eadf3326.

    Research output: Contribution to journalJournal articlepeer-review

  87. Published

    Impact of Microbial Symbionts on Fungus-Farming Termites and Their Derived Ecosystem Functions

    Murphy, Rob, Sinotte, Veronica Marie, Schmidt, Suzanne, Li, Guangshuo, Hamilton Renalias, J., Koné, N. A. & Poulsen, Michael, 2023, Assessing the Microbiological Health of Ecosystems. Hurst, C. J. (ed.). Wiley, p. 185-203

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  88. Published

    Improved predictions of phase behaviour of intrinsically disordered proteins by tuning the interaction range

    Tesei, Giulio & Lindorff-Larsen, Kresten, 2023, In: Open Research Europe. 2, 94, 24 p.

    Research output: Contribution to journalJournal articlepeer-review

  89. Published
  90. Published

    Indirect maternal effects via nest microbiome composition drive gut colonization in altricial chicks

    Diez‐Méndez, D., Bodawatta, Kasun Harshana, Freiberga, I., Klečková, I., Jønsson, Knud Andreas, Poulsen, Michael & Sam, K., 2023, In: Molecular Ecology. 32, 13, p. 3657-3671 15 p.

    Research output: Contribution to journalJournal articlepeer-review

  91. Published

    Informing the SWAT model with remote sensing detected vegetation phenology for improved modeling of ecohydrological processes

    Chen, S., Fu, Y. H., Wu, Z., Hao, F., Hao, Z., Guo, Y., Geng, X., Li, X., Zhang, X., Tang, Jing, Singh, V. P. & Zhang, X., 2023, In: Journal of Hydrology. 616, 13 p., 128817.

    Research output: Contribution to journalJournal articlepeer-review

  92. Published

    Inherent lack of CMFDA/FDA staining in certain algae and its implication for ballast water testing

    Hansen, Gert, Petersen, G., Maguet, R., Sim, E. & Madsen, T., 2023, In: Marine Pollution Bulletin. 194, Part B, 9 p., 115312.

    Research output: Contribution to journalJournal articlepeer-review

  93. Published

    Insectivorous bats in Indian rice fields respond to moonlight, temperature, and insect activity

    Bhalla, I. S., Razgour, O., Rigal, F. & Whittaker, R. J., 2023, In: Landscape Ecology. 38, 11, p. 2947-2963 17 p.

    Research output: Contribution to journalJournal articlepeer-review

  94. Published

    Integrated NMR/Molecular Dynamics Determination of the Ensemble Conformation of a Thermodynamically Stable CUUG RNA Tetraloop

    Oxenfarth, A., Kümmerer, Felix, Bottaro, S., Schnieders, R., Pinter, G., Jonker, H. R. A., Fürtig, B., Richter, C., Blackledge, M., Lindorff-Larsen, Kresten & Schwalbe, H., 2023, In: Journal of the American Chemical Society. 145, 30, p. 16557-16572 16 p.

    Research output: Contribution to journalJournal articlepeer-review

  95. Published

    Integrative genetic and single cell RNA sequencing analysis provides new clues to the amyotrophic lateral sclerosis neurodegeneration

    Liu, H., Guan, Liping, Deng, M., Bolund, L., Kristiansen, Karsten, Zhang, J., Luo, Y. & Zhang, Z., 2023, In: Frontiers in Neuroscience. 17, 10 p., 1116087.

    Research output: Contribution to journalJournal articlepeer-review

  96. Published

    Integrative taxonomy of Central European Planetella (Diptera: Cecidomyiidae) indicates high species diversity, intraspecific variation and low host specificity

    Ševčík, J., Hippa, H., Burdíková, N., Sopuch, K., Skuhravá, M. & Bruun, Hans Henrik, 2023, In: Acta Entomologica Musei Nationalis Pragae. 63, 2, p. 413-450 38 p.

    Research output: Contribution to journalJournal articlepeer-review

  97. Published

    Interactions between microenvironmental acidity and PDAC driver mutations studied in 3D organotypic culture

    Ialchina, Renata, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 261 p.

    Research output: Book/ReportPh.D. thesis

  98. Published

    Intermittent fasting modulates the intestinal microbiota and improves obesity and host energy metabolism

    Hu, X., Xia, K., Dai, M., Han, X., Yuan, P., Liu, J., Liu, S., Jia, F., Chen, J., Jiang, F., Yu, J., Yang, H., Wang, J., Xu, X., Jin, X., Kristiansen, Karsten, Xiao, L., Chen, W., Han, Mo & Duan, S., 2023, In: npj Biofilms and Microbiomes. 9, 1, 9 p., 19.

    Research output: Contribution to journalJournal articlepeer-review

  99. Published

    Interpreting the molecular mechanisms of disease variants in human transmembrane proteins

    Tiemann, Johanna Katarina Sofie, Zschach, Henrike, Lindorff-Larsen, Kresten & Stein, Amelie, 2023, In: Biophysical Journal. 122, 11, 16 p.

    Research output: Contribution to journalJournal articlepeer-review

  100. Published

    Intraspecific trait variability is a key feature underlying high Arctic plant community resistance to climate warming

    Jónsdóttir, I. S., Halbritter, A. H., Christiansen, C. T., Althuizen, I. H. J., Haugum, S. V., Henn, J. J., Björnsdóttir, K., Maitner, B. S., Malhi, Y., Michaletz, S. T., Roos, R. E., Klanderud, K., Lee, H., Enquist, B. J. & Vandvik, V., 2023, In: Ecological Monographs. 93, 1, 21 p., e1555.

    Research output: Contribution to journalJournal articlepeer-review

  101. Published

    Intrinsically Disordered Proteins as an Instrument for Research-Integrating Teaching

    Skriver, K., Sjørup, S. A., Langkilde, A. E., Balouka, E., Christensen, C. S., Carbel, K., Decker, J. N. V., Essenbæk, D. N., Gräf, J. F., Jessen, C. H., Kristensen, P., Merrild, C., Mortensen, T. S., Nalepa, I. F., Nordsteen, B. W., Svoren, S. K., van Hall, M., Weicher, J., Wind, M. L., Zhang, D. & 8 others, Saar, Daniel, Blæsild, H., Stahlhut, M., Andersen, K. V., Dagil, Robert, Vestergaard, Bente, Ryberg, Marie L. & Kragelund, Birthe Brandt, 2023, In: The Biophysicist. 4 , 2, p. 1-7 7 p.

    Research output: Contribution to journalJournal articlepeer-review

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