Department of Biology

 

 
  1. 2023
  2. Published

    Herbivore-shrub interactions influence ecosystem respiration and biogenic volatile organic compound composition in the subarctic

    Brachmann, C. G., Vowles, T., Rinnan, Riikka, Björkman, M. P., Ekberg, A. & Björk, R. G., 2023, In: Biogeosciences. 20, 19, p. 4069-4086 18 p.

    Research output: Contribution to journalJournal articlepeer-review

  3. Published

    The N-coil and the globular N-terminal domain of plant ARGONAUTE1 are interaction hubs for regulatory factors

    Bressendorff, Simon, Kausika, S., Sjøgaard, Ida Marie Zobbe, Oksbjerg, Emilie Duus, Michels, A., Poulsen, C. & Brodersen, Peter, 2023, In: Biochemical Journal. 480, 13, p. 957-974 18 p.

    Research output: Contribution to journalJournal articlepeer-review

  4. Published

    Photosynthetic capacity in seagrass seeds and early-stage seedlings of Zostera marina

    Brodersen, Kasper Elgetti & Kühl, Michael, 2023, In: New Phytologist. 239, 4, 15 p.

    Research output: Contribution to journalJournal articlepeer-review

  5. Published

    ASSESSING CRYPTIC MARINE BIODIVERSITY: Environmental DNA detection, microhabitat dependences and functional ecology of cryptic fauna

    Brodnicke, O. B., 2023, Department of Biology, Faculty of Science, University of Copenhagen. 120 p.

    Research output: Book/ReportPh.D. thesis

  6. Published

    Deep-sea sponge derived environmental DNA analysis reveals demersal fish biodiversity of a remote Arctic ecosystem

    Brodnicke, O. B., Meyer, H. K., Busch, K., Xavier, J. R., Knudsen, Steen Wilhelm, Møller, Peter Rask, Hentschel, U. H. & Sweet, M. J., 2023, In: Environmental DNA. 5, 6, p. 1405-1417 13 p.

    Research output: Contribution to journalJournal articlepeer-review

  7. Published

    A Roundtable on the Skjern River Delta and New Narratives in Nature Restoration: A Swampy and Impenetrable Landscape with Unpredictable Natural Dynamics

    Bruun, Hans Henrik, Ejrnæs, R., Brunbjerg, A. K., Larsen, R. E., Dalgas, G. S. & Carstensen, J. S., 2023, Critical Coast. Arkitektens Forlag, 20 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterCommunication

  8. Published

    Aquatic Plants of Northern and Central Europe including Britain and Ireland: Monumental vandplantebog

    Bruun, Hans Henrik, 2023, In: Urt. 47, 3, p. 32-33 2 p.

    Research output: Contribution to journalLiterature review

  9. Published

    Erstnachweis von Jaapiella chelidonii in Deutschland und von Mayetiola hellwigi in Schleswig-Holstein (Diptera: Cecidomyiidae)

    Bruun, Hans Henrik, 2023, In: Virgo - Mitteilungsblatt des Entomologischen Vereins Mecklenburg. 26, p. 91-92 2 p.

    Research output: Contribution to journalJournal article

  10. Published

    Unwrapping NPT Simulations to Calculate Diffusion Coefficients

    Bullerjahn, J. T., von Bülow, Sören, Heidari, M., Hénin, J. & Hummer, G., 2023, In: Journal of Chemical Theory and Computation. 19, 11, p. 3406-3417 12 p.

    Research output: Contribution to journalJournal articlepeer-review

  11. Published

    Where are we now with European forest multi-taxon biodiversity and where can we head to?

    Burrascano, S., Chianucci, F., Trentanovi, G., Kepfer-Rojas, S., Sitzia, T., Tinya, F., Doerfler, I., Paillet, Y., Nagel, T. A., Mitic, B., Morillas, L., Munzi, S., Van der Sluis, T., Alterio, E., Balducci, L., de Andrade, R. B., Bouget, C., Giordani, P., Lachat, T., Matosevic, D. & 117 others, Napoleone, F., Nascimbene, J., Paniccia, C., Roth, N., Aszalós, R., Brazaitis, G., Cutini, A., D'Andrea, E., De Smedt, P., Heilmann-Clausen, Jacob, Janssen, P., Kozák, D., Mårell, A., Mikoláš, M., Nordén, B., Matula, R., Schall, P., Svoboda, M., Ujhazyova, M., Vandekerkhove, K., Wohlwend, M., Xystrakis, F., Aleffi, M., Ammer, C., Archaux, F., Asbeck, T., Avtzis, D., Ayasse, M., Bagella, S., Balestrieri, R., Barbati, A., Basile, M., Bergamini, A., Bertini, G., Biscaccianti, A. B., Boch, S., Bölöni, J., Bombi, P., Boscardin, Y., Brunialti, G., Bruun, Hans Henrik, Buscot, F., Byriel, David Bille, Campagnaro, T., Campanaro, A., Chauvat, M., Ciach, M., Čiliak, M., Cistrone, L., Pereira, J. M. C., Daniel, R., De Cinti, B., De Filippo, G., Dekoninck, W., Di Salvatore, U., Dumas, Y., Elek, Z., Ferretti, F., Fotakis, D., Frank, T., Frey, J., Giancola, C., Gomoryová, E., Gosselin, M., Gosselin, F., Gossner, M. M., Götmark, F., Haeler, E., Hansen, A. K., Hertzog, L., Hofmeister, J., Hošek, J., Johannsen, VK, Justesen, Mathias Just, Korboulewsky, N., Kovács, B., Lakatos, F., Landivar, C. M., Lens, L., Lingua, E., Lombardi, F., Máliš, F., Marchino, L., Marozas, V., Matteucci, G., Mattioli, W., Møller, P. F., Müller, J., Németh, C., Ónodi, G., Parisi, F., Perot, T., Perret, S., Persiani, A. M., Portaccio, A., Posillico, M., Preikša, Ž., Rahbek, Carsten, Rappa, N. J., Ravera, S., Romano, A., Samu, F., Scheidegger, C., Schmidt, Inger Kappel, Schwegmann, S., Sicuriello, F., Spinu, A. P., Spyroglou, G., Stillhard, J., Topalidou, E., Tøttrup, Anders P., Ujházy, K., Veres, K., Verheyen, K., Weisser, W. W., Zapponi, L. & Ódor, P., 2023, In: Biological Conservation. 284, 13 p., 110176.

    Research output: Contribution to journalReviewpeer-review

  12. Published

    Graph neural network interatomic potential ensembles with calibrated aleatoric and epistemic uncertainty on energy and forces

    Busk, J., Schmidt, M. N., Winther, Ole, Vegge, T. & Jørgensen, P. B., 2023, In: Physical Chemistry Chemical Physics. 25, p. 25828-25837 10 p.

    Research output: Contribution to journalJournal articlepeer-review

  13. Published

    Structural basis for kinase inhibition in the tripartite E. coli HipBST toxin-antitoxin system

    Bærentsen, R. L., Nielsen, S. V., Skjerning, R. B., Lyngsø, J., Bisiak, F., Pedersen, J. S., Gerdes, K., Sørensen, Michael Askvad & Brodersen, D. E., 2023, In: eLife. 12, 20 p., RP90400.

    Research output: Contribution to journalJournal articlepeer-review

  14. Published

    Methods for the purification and detection of single nucleotide KRAS mutations on extrachromosomal circular DNA in human plasma

    Hansen, Lasse Bøllehuus, Jakobsen, S. F., Zole, Egija, Noer, Julie Boertmann, Fang, L. T., Alizadeh, S., Johansen, Julia Sidenius, Mohiyuddin, M. & Regenberg, Birgitte, 2023, In: Cancer Medicine. 12, 17, p. 17679-17691 13 p.

    Research output: Contribution to journalJournal articlepeer-review

  15. Published
  16. Published

    A High Resolution, High Throughput Approach for Subcellular Spatial Omics

    CHEN, Ao, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 130 p.

    Research output: Book/ReportPh.D. thesis

  17. Published

    CRI-SPA: a high-throughput method for systematic genetic editing of yeast libraries

    Cachera, P., Olsson, H., Coumou, H., Jensen, M. L., Sánchez, B., Strucko, T., Van den broek, M., Daran, J., Jensen, M., Sonnenschein, N., Lisby, Michael & Mortensen, U., 2023, In: Nucleic acids symposium series. 51, 17, 14 p., e91.

    Research output: Contribution to journalJournal articlepeer-review

  18. Published

    Discovering functionally important sites in proteins

    Cagiada, Matteo, Bottaro, S., Lindemose, Søren, Schenstrøm, S. M., Stein, Amelie, Hartmann-Petersen, Rasmus & Lindorff-Larsen, Kresten, 2023, In: Nature Communications. 14, 1, 13 p., 4175.

    Research output: Contribution to journalJournal articlepeer-review

  19. Published

    Understanding the Role of Individual Residues in Proteins: a Study of Missense Variants and their Impact on Function

    Cagiada, Matteo, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 155 p.

    Research output: Book/ReportPh.D. thesis

  20. Published

    Ecomorphological correlates of inner ear shape in Australian limb-reduced skinks (Scincidae: Sphenomorphini)

    Camaiti, M., Wiles, J., Aguilar, R., Hutchinson, M. N., Hipsley, Christy Anna, Chapple, D. G. & Evans, A. R., 2023, In: Zoological Journal of the Linnean Society. 199, 4, p. 994-1012 19 p.

    Research output: Contribution to journalJournal articlepeer-review

  21. Published

    Macroecological and biogeographical patterns of limb reduction in the world's skinks

    Camaiti, M., Evans, A. R., Hipsley, Christy Anna, Hutchinson, M. N., Meiri, S., de Oliveira Anderson, R., Slavenko, A. & Chapple, D. G., 2023, In: Journal of Biogeography. 50, 2, 13 p.

    Research output: Contribution to journalJournal articlepeer-review

  22. Published

    Bacteriophages suppress CRISPR–Cas immunity using RNA-based anti-CRISPRs

    Camara, Sarah, Mayo-Muñoz, D., Russel, J., Fagerlund, R. D., Madsen, Jonas Stenløkke, Fineran, P. C., Sørensen, Søren Johannes & Pinilla Redondo, Rafael, 2023, In: Nature. 623, 7987, p. 601-607 7 p.

    Research output: Contribution to journalJournal articlepeer-review

  23. Published

    Restricted O2 consumption in pea roots induced by hexanoic acid is linked to depletion of Krebs cycle substrates

    Casolo, V., Zancani, M., Pellegrini, Elisa, Filippi, A., Gargiulo, S., Konnerup, D., Morandini, P. & Pedersen, Ole, 2023, In: Physiologia Plantarum. 175, 5, 13 p., e14024.

    Research output: Contribution to journalJournal articlepeer-review

  24. Published

    Lymph Vessels Associate with Cancer Stem Cells from Initiation to Malignant Stages of Squamous Cell Carcinoma

    Cazzola, Anna, Calzón Lozano, D., Menne, D. H., Dávila Pedrera, R., Liu, J., Peña-Jiménez, D., Fontenete, S., Halin, C. & Perez-Moreno, Mirna, 2023, In: International Journal of Molecular Sciences. 24, 17, 20 p., 13615.

    Research output: Contribution to journalJournal articlepeer-review

  25. Published

    Multiple paths toward repeated phenotypic evolution in the spiny-leg adaptive radiation (Tetragnatha; Hawai'i)

    Cerca, J., Cotoras, D. D., Santander, Cindy Gilda, Bieker, V. C., Hutchins, L., Morin-Lagos, J., Prada, C. F., Kennedy, S., Krehenwinkel, H., Rominger, A. J., Meier, J., Dimitrov, D., Struck, T. H. & Gillespie, R. G., 2023, In: Molecular Ecology. 32, 18, p. 4971-4985 15 p.

    Research output: Contribution to journalJournal articlepeer-review

  26. Published

    Single-cell spatial transcriptome reveals cell-type organization in the macaque cortex

    Chen, A., Sun, Y., Lei, Y., Li, C., Liao, S., Meng, J., Bai, Y., Liu, Z., Liang, Z., Zhu, Z., Yuan, N., Yang, H., Wu, Z., Lin, F., Wang, K., Li, M., Zhang, S., Yang, M., Fei, T., Zhuang, Z. & 85 others, Huang, Y., Zhang, Y., Xu, Y., Cui, L., Zhang, R., Han, L., Sun, X., Chen, B., Li, W., Huangfu, B., Ma, K., Ma, J., Li, Z., Lin, Y., Wang, H., Zhong, Y., Zhang, H., Yu, Q., Wang, Y., Liu, X., Peng, J., Liu, C., Chen, W., Pan, W., An, Y., Xia, S., Lu, Y., Wang, M., Song, X., Liu, S., Wang, Z., Gong, C., Huang, X., Yuan, Y., Zhao, Y., Chai, Q., Tan, X., Liu, J., Zheng, M., Li, S., Huang, Y., Hong, Y., Huang, Z., Li, M., Jin, M., Li, Y., Zhang, H., Sun, S., Gao, L., Bai, Y., Cheng, M., Hu, G., Liu, S., Wang, B., Xiang, B., Li, S., Li, H., Chen, M., Wang, S., Li, M., Liu, W., Liu, X., Zhao, Q., Lisby, Michael, Wang, J., Fang, J., Lin, Y., Xie, Q., He, J., Xu, H., Huang, W., Mulder, J., Yang, H., Sun, Y., Uhlen, M., Poo, M., Wang, J., Yao, J., Wei, W., Li, Y., Shen, Z., Liu, L., Liu, Z., Xu, X. & Li, C., 2023, In: Cell. 186, 17, p. 3726-3743.e24 43 p.

    Research output: Contribution to journalJournal articlepeer-review

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