Department of Biology

 

 
  1. Published

    Complementary symbiont contributions to plant decomposition in a fungus-farming termite

    Thomas-Poulsen, M., Hu, H., Li, C., Chen, Z., Xu, L., Otani, S., Nygaard, S., Nobre, T., Klaubauf, S., Schindler, P. M., Hauser, F., Pan, H., Yang, Z., Sonnenberg, A. S. M., de Beer, Z. W., Zhang, Y., Wingfield, M. J., Grimmelikhuijzen, C., de Vries, R. P., Korb, J. & 4 others, Aanen, D. K., Wang, J., Boomsma, Jacobus J. & KU, thw266, 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, 40, 6 p., 14500-14505.

    Research output: Contribution to journalJournal articlepeer-review

  2. Published

    Integrating coarse-grained molecular dynamics simulations with small-angle X-ray scattering data to characterize multidomain proteins and their assemblies

    Thomasen, Emil, 2024, Department of Biology, Faculty of Science, University of Copenhagen. 205 p.

    Research output: Book/ReportPh.D. thesis

  3. Published

    Conformational ensembles of intrinsically disordered proteins and flexible multidomain proteins

    Thomasen, Emil & Lindorff-Larsen, Kresten, 2022, In: Biochemical Society Transactions. 50, 1, p. 541-554 14 p.

    Research output: Contribution to journalReviewpeer-review

  4. Published

    Improving Martini 3 for Disordered and Multidomain Proteins

    Thomasen, Emil, Pesce, Francesco, Roesgaard, M. A., Tesei, Giulio & Lindorff-Larsen, Kresten, 2022, In: Journal of Chemical Theory and Computation. 18, 4, p. 2033-2041 9 p.

    Research output: Contribution to journalJournal articlepeer-review

  5. Published

    Conformational and oligomeric states of SPOP from small-angle X-ray scattering and molecular dynamics simulations

    Thomasen, Emil, Cuneo, M. J., Mittag, T. & Lindorff-Larsen, Kresten, 2023, In: eLife. 12, 23 p., e84147.

    Research output: Contribution to journalJournal articlepeer-review

  6. Published

    Effects of Lifetime Exposures to Environmental Contaminants on the Adult Gut Microbiome

    Thompson, K. N., Oulhote, Y., Weihe, P., Wilkinson, J. E., Ma, S., Zhong, H., Li, J., Kristiansen, Karsten, Huttenhower, C. & Grandjean, P., 2022, In: Environmental Science & Technology. 56, 23, p. 16985-16995 11 p.

    Research output: Contribution to journalJournal articlepeer-review

  7. Published

    Identification of BLNK and BTK as mediators of rituximab-induced programmed cell death by CRISPR screens in GCB-subtype diffuse large B-cell lymphoma

    Thomsen, E. A., Rovsing, A. B., Anderson, M. V., Due, H., Huang, J., Luo, Y., Dybkær, K. & Mikkelsen, J. G., 2020, In: Molecular Oncology. 14, 9, p. 1978-1997 20 p.

    Research output: Contribution to journalJournal articlepeer-review

  8. Published

    Fytoplankton og heterotroft nanoplankton

    Thomsen, H. A., Hansen, Gert, Larsen, Jacob, Moestrup, Øjvind & Vørs, N., 1992, Planktondynamik og stofomsætning i Kattegat. Fenchel, T. (ed.). Miljøstyrelsen, Vol. 10. p. 31-59 29 p. (Havforskning fra Miljøstyrelsen, Vol. 10).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearch

  9. Published

    Follow the leader? Orange-fronted conures eavesdrop on conspecific vocal performance and utilise it in social decisions

    Thomsen, Heidi Maria, Balsby, T. J. S. & Dabelsteen, Torben, 2021, In: PLoS ONE. 16, 6, 22 p., e0252374.

    Research output: Contribution to journalJournal articlepeer-review

  10. Published

    Individual variation in the contact calls of the monomorphic Peach-fronted Conure, Aratinga aurea, and its potential role in communication

    Thomsen, Heidi Maria, Balsby, T. J. S. & Dabelsteen, Torben, 2013, In: Bioacoustics - the International Journal of Animal Sound and its Recording. 22, 3, p. 215-227 13 p.

    Research output: Contribution to journalJournal articlepeer-review

  11. Published

    The imitation dilemma: can parrots maintain their vocal individuality when imitating conspecifics?

    Thomsen, Heidi Maria, Balsby, T. J. S. & Dabelsteen, Torben, 2019, In: Behaviour. 156, 5-8, p. 787-814 28 p.

    Research output: Contribution to journalJournal articlepeer-review

  12. Published

    Flock social behaviour and vocal communication in Eupsittula conures

    Thomsen, Heidi Maria, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 195 p.

    Research output: Book/ReportPh.D. thesis

  13. Published

    Loricate choanoflagellates from West Greenland (August 1988) including the description of Spinoeca buckii gen. et sp. nov.

    Thomsen, H. A., Østergaard, J. B. & Hansen, L. E., 1995, In: European Journal of Protistology. 31, p. 38-44

    Research output: Contribution to journalJournal article

  14. Published

    Loricabærende Choanoflagellater (Kraveflagellater)

    Thomsen, H. A., 1992, Plankton i de indre danske farvande. Havforskning fra Miljøstyrelsen. Danmark, p. 157-194

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearch

  15. Published

    Lennoxia faveolata gen. et sp. nov. (Diatomophyceae) from South America, California, West Greenland and Denmark

    Thomsen, H. A., Buck, K. R., Marino, D., Sarno, D., Hansen, L. E., Østergaard, J. B. & Krupp, J., 1993, In: Phycologia. 32 (4), p. 278-283

    Research output: Contribution to journalJournal article

  16. Published

    Three new species of Thaumatomastix (Thaumatomastigidae, Protista incertae sedis), a ubiquitous genus from the Antarctic Ice Biota

    Thomsen, H. A., Kosman, C. & Ikävalko, J., 1995, In: European Journal of Protistology. 312, p. 174-181

    Research output: Contribution to journalJournal article

  17. Published

    Choanoflagellate diversity with particular emphasis on the Acanthoecidae

    Thomsen, H. A. & Buck, K. R., 1991, The Biology of Free-living Heterotrophic Flagellates, 45. Storbritannien, p. 259-284

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearch

  18. Published

    Heteromorphic life histories in arctic coccolithophorids (Prymnesiophyceae)

    Thomsen, H. A., Buch Østergaard, J. & Evald Hansen, L., 1991, In: Journal of Phycology. 27, p. 634-642

    Research output: Contribution to journalJournal article

  19. Published

    Loricate choanoflagellates (Acanthoecidae, Choanoflagellida) from the Weddell Sea, Antarctica

    Thomsen, H. A., Buck, K. R., Coale, S. L., Garrison, D. L. & Gowing, M. M., 1990, In: Zoologica Scripta. vol.19, no.4, p. 367-387

    Research output: Contribution to journalJournal article

  20. Published

    Haptophytes as components of marine phytoplankton

    Thomsen, H. A., Buck, K. R. & Chavez, F. P., 1994, The Haptophyte Algae. Systematics Association Special Volume nr. 51. Oxford, UK: Clarendon Press, p. 187-208

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearch

  21. Published

    New observations on the heterotrophic protist genus Thaumatomastix (Thaumatomastigaceae, Protista incerta sedis), with particular emphasis on material from the Baltic Sea

    Thomsen, H. A., Hällfors, G., Hällfors, S. & Ikävalko, J., 1993, In: Ann. Bot. Fennici. 30, p. 87-108

    Research output: Contribution to journalJournal article

  22. Published
  23. Published

    Plankton i de indre danske farvande

    Thomsen, H. A., 1992, Danmark: Miljøministeriet. 331 p.

    Research output: Book/ReportBook

  24. Published

    The ultrastructure of Commation gen. nov. (Stramenopiles Incertae Sedis), a genus of heterotrophic nanoplanktonic flagellates from Antarctic waters

    Thomsen, H. A. & Larsen, J., 1993, In: European Journal of Protistology. 29, p. 462-477

    Research output: Contribution to journalJournal article

  25. Published

    Fine structure and biology of Cryothecomonas gen.nov. (Protista incertae sedis) from the ice biota

    Thomsen, H. A., Buck, K. R., Bolt, P. A. & Garrison, D. L., 1991, In: Can. J. Zool.. 69, p. 1048-1070

    Research output: Contribution to journalJournal article

  26. Published

    Choanoflagellates of the Central California waters: taxonomy, morphology and species assemblages

    Thomsen, H. A., Buck, K. R. & Chavez, F. P., 1991, In: Marine Biology Research. 33, p. 131-164

    Research output: Contribution to journalJournal article

  27. Published

    Mikroorganismer i havis

    Thomsen, H. A., 1995, In: Naturens Verden. 10, p. 371-379

    Research output: Contribution to journalJournal article

  28. Published

    Ericiolus gen. nov. (Prymnesiophyceae), a new coccolithophorid genus from polar and temperate regions

    Thomsen, H. A., Bjørn, P. P., Højlund, L., Olesen, J. & Pedersen, J. B., 1995, In: European Journal of Phycology. 30, p. 29-34

    Research output: Contribution to journalJournal article

  29. Published

    Species of Thaumatomastix (Thaumatomastigidae, Protista Incertae Sedis) from the Arctic Sea ice biota (North East Water Polynya, North East Greenland)

    Thomsen, H. A., 1997, In: Journal of Marine Systems. 10, p. 263-277

    Research output: Contribution to journalJournal article

  30. Published

    Choano flagellates (Acanthoecidae, Choanoflagellida) from the Weddell Sea, Antarctica, taxonomy and community structure with particular emphasis on the ice biota, with preliminary remarks on ch.......

    Thomsen, H. A., Garrison, D. L. & Kosman, C., 1997, In: Archiw für Prolistenkunde. 148, p. 77-114

    Research output: Contribution to journalJournal article

  31. Published

    Svampe, mos og lav som mikrohabitater

    Thomsen, Iben Margrete, Skov, Simon & Bergstedt, C. E., 2019, In: Videnblade Park og Landskab. November 2019, 06.08-08, 2 p.

    Research output: Contribution to journalJournal article

  32. Published

    Prolonged administration of recombinant human erythropoietin increases submaximal performance more than maximal aerobic capacity.

    Thomsen, J. J., Rentsch, R. L., Robach, P., Calbet, J. A. L., Boushel, R., Rasmussen, P., Juel, C. & Lundby, C., 2007, In: European Journal of Applied Physiology. 101, 4, p. 481-6 5 p.

    Research output: Contribution to journalJournal articlepeer-review

  33. Published

    Transient intermediary states with high and low folding probabilities in the apparent two-state folding equilibrium of ACBP at low pH

    Thomsen, J. K., Kragelund, Birthe Brandt, Teilum, Kaare, Knudsen, J. & Poulsen, F. M., 2002, In: Journal of Molecular Biology. 318, 3, p. 805-14 9 p.

    Research output: Contribution to journalJournal articlepeer-review

  34. Published

    Deep Learning for Diagnostic Binary Classification of Multiple-Lesion Skin Diseases

    Thomsen, K., Christensen, A. L., Iversen, L., Lomholt, H. B. & Winther, Ole, 2020, In: Frontiers in Medicine. 7, 7 p., 574329.

    Research output: Contribution to journalJournal articlepeer-review

  35. Published

    Systematic review of machine learning for diagnosis and prognosis in dermatology

    Thomsen, K., Iversen, L., Titlestad, T. L. & Winther, Ole, 2020, In: Journal of Dermatological Treatment. 31, 5, p. 496-510

    Research output: Contribution to journalReviewpeer-review

  36. Published

    Effect of cell shrinkage on apical and basolateral sodium permeability of isolated frog skin

    Thomsen, L. & Nielsen, R., 1991, In: Acta Physiologica (Print Edition). 143, p. 6A

    Research output: Contribution to journalJournal article

  37. Published

    Advanced computer control of electrophysiological experimentation

    Thomsen, L., Pearson, G. T., Larsen, Erik Hviid & Skadhauge, E., 1996, In: Journal of Neuroscience Methods. 65, p. 19-26 8 p.

    Research output: Contribution to journalJournal articlepeer-review

  38. Published

    The influence of stocking rate on helminth transmission in outdoor pigs

    Thomsen, L. E., Mejer, H., Wendt, S., Roepstorff, A. & Hindsbo, O., 1999, Ikke angivet. 17. International Conference of WAAVP, p. g.6.07

    Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearch

  39. Published

    Fremmede tangarter i Danmark: Hvilke, hvornår og hvor udbredte?

    Thomsen, M., Krause-Jensen, D., Wernberg, T., Stæhr, P. A. & Risgaard-Petersen, N., 2005, In: URT. 29, p. 110-115

    Research output: Contribution to journalJournal article

  40. Published

    Spatio-temporal distribution patterns of the invasive macroalga Sargassum muticum within a Danish Sargassum-bed

    Thomsen, M. S., Wernberg, T., Stæhr, P. A. & Pedersen, M. F., 2006, In: Helgoland Marine Research. 60, 1, p. 50-58

    Research output: Contribution to journalJournal articlepeer-review

  41. Published

    Introducerede dyr og planter i Danmark

    Thomsen, M. S., Stæhr, P. A., Wernberg, T., Krause-Jensen, D., Josefson, A. B. & Tendall, O. S., 2008, In: Naturens Verden. 6, p. 10-18

    Research output: Contribution to journalJournal article

  42. Published

    Alien macroalgae in Denmark - a broad-scale national perspective

    Thomsen, M. S., Wernberg, T., Stæhr, P. A., Krause-Jensen, D., Risgaard-Petersen, N. & Silliman, B. R., 2007, In: Marine Biology Research. 3, 2, p. 61-72

    Research output: Contribution to journalJournal articlepeer-review

  43. Published

    Gracilaria vermiculophylla (Ohmi) Papenfuss, 1967 (Rhodophyta, Gracilariaceae) in northern Europe, with emphasis on Danish conditions, and what to expect in the future

    Thomsen, M. S., Stæhr, P. A., Nyberg, C. D., Schwærter, S., Krause-Jensen, D. & Silliman, B. R., 2007, In: Aquatic Invasions. 2, 2, p. 83-94

    Research output: Contribution to journalJournal articlepeer-review

  44. Published

    Annual changes in abundance of non-indigenous marine benthos on a very large spatial scale

    Thomsen, M. S., Wernberg, T., Stæhr, P. A., Silliman, B. R., Josefson, A. B., Krause-Jensen, D. & Risgaard-Petersen, N., 2008, In: Aquatic Invasions. 3, 2, p. 133-140

    Research output: Contribution to journalJournal articlepeer-review

  45. Published

    Imprimer La Lumiere – 3D Printing Bioluminescence for Architectural Materiality

    Thomsen, M. R., Tamke, M., Mosse, A., Sieder-semlitsch, J., Bradshaw, H., Buchwald, E. F. & Moßhammer, Maria, 2021, Proceedings of the 2021 DigitalFUTURES: The 3rd International Conference on Computational Design and Robotic Fabrication (CDRF 2021). Yuan, P. F., Chai, H., Yan, C. & Leach, N. (eds.). Springer Singapore, p. 305-315 11 p. Chapter 28

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  46. Published

    Non-destructive sampling of ancient insect DNA

    Thomsen, P. F., Elias, S., Gilbert, M Thomas P, Haile, James Seymour, Munch, K., Kuzmina, S., Froese, D. G., Sher, A., Holdaway, R. N. & Willerslev, Eske, 2009, In: PLoS ONE. 4, 4, p. e5048

    Research output: Contribution to journalJournal articlepeer-review

  47. Published

    Detection of a diverse marine fish fauna using environmental DNA from seawater samples

    Thomsen, P. F., Kielgast, J., Iversen, Lars Lønsmann, Møller, Peter Rask, Rasmussen, M. & Willerslev, Eske, 2012, In: PLoS ONE. 7, 8, 9 p., e41732.

    Research output: Contribution to journalJournal articlepeer-review

  48. Published

    Monitoring endangered freshwater biodiversity using environmental DNA

    Thomsen, P. F., Kielgast, J., Iversen, Lars Lønsmann, Wiuf, C. H., Rasmussen, M., Gilbert, M Thomas P, Orlando, L. A. A. & Willerslev, Eske, 2012, In: Molecular Ecology. 21, 11, p. 2565-2573 9 p.

    Research output: Contribution to journalJournal articlepeer-review

  49. Published

    Resource specialists lead local insect community turnover associated with temperature - analysis of an 18-year full-seasonal record of moths and beetles

    Thomsen, P. F., Jørgensen, P. S., Bruun, Hans Henrik, Pedersen, Jan, Riis-Nielsen, Torben, Jonko, K., Słowińska, I., Rahbek, Carsten & Karsholt, Ole, 2016, In: Journal of Animal Ecology. 85, 1, p. 251-261 11 p.

    Research output: Contribution to journalJournal articlepeer-review

  50. Published

    Rapid selection of Plasmodium falciparum chloroquine resistance transporter gene and multidrug resistance gene-1 haplotypes associated with past chloroquine and present artemether-lumefantrine use in Inhambane District, southern Mozambique

    Thomsen, T. T., Madsen, L. B., Hansson, Helle Smedegaard, Tomás, E. V. E., Charlwood, D., Bygbjerg, Ib Christian & Alifrangis, Michael, Mar 2013, In: American Journal of Tropical Medicine and Hygiene. 88, 3, p. 536-41 6 p.

    Research output: Contribution to journalJournal articlepeer-review