Population Bottlenecks and Intra-host Evolution During Human-to-Human Transmission of SARS-CoV-2

Research output: Contribution to journalJournal articleResearchpeer-review

  • Daxi Wang
  • Yanqun Wang
  • Wanying Sun
  • Lu Zhang
  • Jingkai Ji
  • Zhaoyong Zhang
  • Xinyi Cheng
  • Yimin Li
  • Fei Xiao
  • Airu Zhu
  • Bei Zhong
  • Shicong Ruan
  • Jiandong Li
  • Peidi Ren
  • Zhihua Ou
  • Minfeng Xiao
  • Min Li
  • Ziqing Deng
  • Huanzi Zhong
  • Fuqiang Li
  • And 12 others
  • Wen-jing Wang
  • Yongwei Zhang
  • Weijun Chen
  • Shida Zhu
  • Xun Xu
  • Xin Jin
  • Jingxian Zhao
  • Nanshan Zhong
  • Wenwei Zhang
  • Jincun Zhao
  • Junhua Li
  • Yonghao Xu

The emergence of the novel human coronavirus, SARS-CoV-2, causes a global COVID-19 (coronavirus disease 2019) pandemic. Here, we have characterized and compared viral populations of SARS-CoV-2 among COVID-19 patients within and across households. Our work showed an active viral replication activity in the human respiratory tract and the co-existence of genetically distinct viruses within the same host. The inter-host comparison among viral populations further revealed a narrow transmission bottleneck between patients from the same households, suggesting a dominated role of stochastic dynamics in both inter-host and intra-host evolutions.

Original languageEnglish
Article number585358
JournalFrontiers in Medicine
Volume8
Number of pages7
ISSN2296-858X
DOIs
Publication statusPublished - 2021

    Research areas

  • evolution, human to human transmission, intra-host variation, population bottleneck, SARS-CoV-2

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