thw266 KU

thw266 KU

Professor, Affiliate Professor

Member of:

    ORCID: 0000-0001-6860-1521

    Publication year:
    All
    1 - 21 out of 21Page size: 25
    1. 2020
    2. Published

      863 genomes reveal the origin and domestication of chicken

      Wang, M. S., Thakur, M., Peng, M-S., Jiang, Y., Frantz, L. A. F., Li, M., Zhang, J-J., Wang, S., Peters, J., Otecko, N. O., Suwannapoom, C., Guo, X., Zheng, Z-Q., Esmailizadeh, A., Hirimuthugoda, N. Y., Ashari, H., Suladari, S., Zein, M. S. A., Kusza, S., Sohrabi, S. & 37 others, Kharrati-Koopaee, H., Shen, Q., Zeng, L., Yang, M., Wu, Y., Yang, X., Lu, X., Jia, X., Nie, Q., Lamont, S. J., Lasagna, E., Ceccobelli, S., Gunwardana, H. G. T. N., Senasige, T. M., Feng, S., Si, J., Zhang, H., Jin, J., Li, M., Liu, Y., Chen, H., Ma, C., Dai, S., Bhuiyan, A. K. F. H., Khan, M. S., Silva, G. L. L. P., Le, T., Mwai, O. A., Ibrahim, M. N. M., Supple, M., Shapiro, B., Hanotte, O., KU, thw266, Larson, G., Han, J., Wu, D. & Zhang, Y., 2020, In: Cell Research. 30, 8, p. 693-701 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      A draft genome assembly of spotted hyena, Crocuta crocuta

      Yang, C., Li, F., Xiong, Z., Koepfli, K., Ryder, O., Perelman, P., Li, Q. & KU, thw266, 2020, In: Scientific Data. 7, 10 p., 126.

      Research output: Contribution to journal › Journal article › Research › peer-review

    4. Published

      A draft genome sequence of the elusive giant squid, Architeuthis dux

      da Fonseca, R. R., Couto, A., Machado, A. M., Brejova, B., Albertin, C. B., Silva, F., Gardner, P., Baril, T., Hayward, A., Campos, A., Ribeiro, Â. M., Barrio-Hernandez, I., Hoving, H-J., Tafur-Jimenez, R., Chu, C., Frazão, B., Petersen, B., Peñaloza, F., Musacchia, F., Alexander, G. C. & 24 others, Osório, H., Winkelmann, I., Simakov, O., Rasmussen, Simon, Rahman, M. Z., Pisani, D., Vinther, J., Jarvis, E., KU, thw266, Strugnell, J. M., Castro, L. F. C., Fedrigo, O., Patricio, M., Li, Q., Rocha, S., Antunes, A., Wu, Y., Ma, B., Sanges, R., Vinar, T., Blagoev, B., Sicheritz-Pontén, Thomas, Nielsen, Rasmus & Gilbert, M Thomas P, 2020, In: GigaScience. 9, 1, 12 p., giz152.

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. Published

      A novel method for using RNA-seq data to identify imprinted genes in social Hymenoptera with multiply mated queens

      Howe, Jack, Schiøtt, M., Li, Q., Wang, Z., KU, thw266 & Boomsma, Jacobus J., 2020, In: Journal of Evolutionary Biology. 33, 12, p. 1770-1782 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      An Indo-Pacific Humpback Dolphin Genome Reveals Insights into Chromosome Evolution and the Demography of a Vulnerable Species

      Zhang, P., Zhao, Y., Li, C., Lin, M., Dong, L., Zhang, R., Liu, M., Li, K., Zhang, H., Liu, X., Zhang, Y., Yuan, Y., Liu, H., Seim, I., Sun, S., Du, X., Chang, Y., Li, F., Liu, S., Lee, S. M. Y. & 13 others, Wang, K., Wang, D., Wang, X., McGowen, M. R., Jefferson, T. A., Olsen, Morten Tange, Stiller, Josefin, KU, thw266, Xu, X., Yang, H., Fan, G., Liu, X. & Li, S., 2020, In: iScience. 23, 10, 52 p., 101640.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      Chromatin accessibility and transcriptome landscapes of Monomorium pharaonis brain

      Wang, M., Liu, Y., Wen, T., Liu, W., Gao, Q., Zhao, J., Xiong, Z., Wang, Z., Jiang, W., Yu, Y., Wu, L., Yuan, Y., Wei, X., Xu, J., Cheng, M., Zhang, P., Li, P., Hou, Y., Yang, H., Zhang, G. & 3 others, Li, Q., Liu, C. & Liu, L., 2020, In: Scientific Data. 7, 10 p., 217.

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. Published

      Dense sampling of bird diversity increases power of comparative genomics

      Feng, S., Stiller, J., Deng, Y., Armstrong, J., Fang, Q., Hart Reeve, A., Xie, D., Chen, G., Guo, C., Faircloth, B. C., Petersen, B., Wang, Z., Zhou, Q., Diekhans, M., Chen, W., Andreu-Sánchez, S., Margaryan, A., Howard, J. T., Parent, C., Pacheco, G. & 130 others, Sinding, Mikkel Holger Strander, Puetz, Lara Christine, Cavill, Emily Louisa, Ribeiro, Â. M., Eckhart, L., Fjeldså, Jon, Hosner, Peter Andrew, Brumfield, R. T., Christidis, L., Bertelsen, Mads Frost, Sicheritz-Pontén, Thomas, Tietze, D. T., Robertson, B. C., Song, G., Borgia, G., Claramunt, S., Lovette, I. J., Cowen, S. J., Njoroge, P., Dumbacher, J. P., Ryder, O. A., Fuchs, J., Bunce, M., Burt, D. W., Cracraft, J., Meng, G., Hackett, S. J., Ryan, P. G., Jønsson, Knud Andreas, Jamieson, I. G., Rodrigues da Fonseca, Rute Andreia, Braun, E. L., Houde, P., Mirarab, S., Suh, A., Hansson, B., Ponnikas, S., Sigeman, H., Stervander, M., Frandsen, P. B., van der Zwan, H., van der Sluis, R., Visser, C., Balakrishnan, C. N., Clark, A. G., Fitzpatrick, J. W., Bowman, R., Chen, N., Cloutier, A., Sackton, T. B., Edwards, S. V., Foote, D. J., Shakya, S. B., Sheldon, F. H., Vignal, A., Soares, A. E. R., Shapiro, B., González-Solís, J., Ferrer-Obiol, J., Rozas, J., Riutort, M., Tigano, A., Friesen, V., Dalén, L., Urrutia, A. O., Székely, T., Liu, Y., Campana, M. G., Corvelo, A., Fleischer, R. C., Rutherford, K. M., Gemmell, N. J., Dussex, N., Mouritsen, H., Thiele, N., Delmore, K., Liedvogel, M., Franke, A., Hoeppner, M. P., Krone, O., Fudickar, A. M., Milá, B., Ketterson, E. D., Fidler, A. E., Friis, G., Parody-Merino, Á. M., Battley, P. F., Cox, M. P., Lima, N. C. B., Prosdocimi, F., Parchman, T. L., Schlinger, B. A., Loiselle, B. A., Blake, J. G., Lim, H. C., Day, L. B., Fuxjager, M. J., Baldwin, M. W., Braun, M. J., Wirthlin, M., Dikow, R. B., Ryder, T. B., Camenisch, G., Keller, L. F., Dacosta, J. M., Hauber, M. E., Louder, M. I. M., Witt, C. C., McGuire, J. A., Mudge, J., Megna, L. C., Carling, M. D., Wang, B., Taylor, S. A., Del-Rio, G., Aleixo, A., Vasconcelos, A. T. R., Mello, C. V., Weir, J. T., Haussler, D., Li, Q., Yang, H., Wang, J., Lei, F., Rahbek, Carsten, Gilbert, M Thomas P, Graves, G. R., Jarvis, E. D., Paten, B. & KU, thw266, 2020, In: Nature. 587, 7833, p. 252-257

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. Published

      Developmental plasticity shapes social traits and selection in a facultatively eusocial bee

      Kapheim, K. M., Jones, B. M., Pan, H., Li, C., Harpur, B. A., Kent, C. F., Zayed, A., Ioannidis, P., Waterhouse, R. M., Kingwell, C., Stolle, E., Avalos, A., KU, thw266, McMillan, W. O. & Wcislo, W. T., 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 24, p. 13615-13625 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      Diverse coral reef invertebrates exhibit patterns of phylosymbiosis

      O'Brien, P. A., Tan, S., Yang, C., Frade, P. R., Andreakis, N., Smith, H. A., Miller, D. J., Webster, N. S., KU, thw266 & Bourne, D. G., 2020, In: ISME Journal. 14, 9, p. 2211-2222 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    11. Published

      Evolutionary History, Genomic Adaptation to Toxic Diet, and Extinction of the Carolina Parakeet

      Gelabert, P., Sandoval-Velasco, M., Serres, A., de Manuel, M., Renom, P., Margaryan, A., Stiller, J., de-Dios, T., Fang, Q., Feng, S., Mañosa, S., Pacheco, G., Ferrando-Bernal, M., Shi, G., Hao, F., Chen, X., Petersen, B., Olsen, R-A., Navarro, A., Deng, Y. & 6 others, Dalén, L., Marquès-Bonet, T., KU, thw266, Antunes, A., Gilbert, M Thomas P & Lalueza-Fox, C., 2020, In: Current Biology. 30, 1, p. 108-114, e1-e5

      Research output: Contribution to journal › Journal article › Research › peer-review

    12. Published

      Genome and single-cell RNA-sequencing of the earthworm Eisenia andrei identifies cellular mechanisms underlying regeneration

      Shao, Y., Wang, X., Zhang, J., Li, M. L., Wu, S., Ma, X., Wang, X., Zhao, H., Li, Y., Zhu, H. H., Irwin, D. M., Wang, D., KU, thw266, Ruan, J. & Wu, D., 2020, In: Nature Communications. 11, 15 p., 2656.

      Research output: Contribution to journal › Journal article › Research › peer-review

    13. Published

      Genomic Adaptations and Evolutionary History of the Extinct Scimitar-Toothed Cat, Homotherium latidens

      Barnett, R., Westbury, M. V., Sandoval-Velasco, M., Vieira, F. G., Jeon, S., Zazula, G., Martin, M. D., Ho, S. Y. W., Mather, N., Gopalakrishnan, S., Ramos-Madrigal, J., de Manuel, M., Zepeda-Mendoza, M. L., Antunes, A., Baez, A. C., De Cahsan, B., Larson, G., O’Brien, S. J., Eizirik, E., Johnson, W. E. & 11 others, Koepfli, K., Wilting, A., Fickel, J., Dalén, L., Lorenzen, Eline, Marques-Bonet, T., Hansen, Anders Johannes, KU, thw266, Bhak, J., Yamaguchi, N. & Gilbert, M Thomas P, 2020, In: Current Biology. 30, p. 5018-5025

      Research output: Contribution to journal › Journal article › Research › peer-review

    14. Published

      Genomic regions influencing aggressive behavior in honey bees are defined by colony allele frequencies

      Avalos, A., Fang, M., Pan, H., Lluch, A. R., Lipka, A. E., Zhao, S. D., Giray, T., Robinson, G. E., KU, thw266 & Hudson, M. E., 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 29, p. 17135-17141 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    15. Published

      High-quality chromosome-level genome assembly and full-length transcriptome analysis of the pharaoh ant Monomorium pharaonis

      Gao, Q., Xiong, Z., Larsen, Rasmus Stenbak, Zhou, L., Zhao, J., Ding, G., Zhao, R., Liu, C., Ran, H. & KU, thw266, 2020, In: GigaScience. 9, 12, 14 p., giaa143.

      Research output: Contribution to journal › Journal article › Research › peer-review

    16. Published

      Multi-omic detection of Mycobacterium leprae in archaeological human dental calculus

      Fotaki, Anna Katerina, Denham, S. D., Mackie, Meaghan, Iraeta Orbegozo, Miren, Mylopotamitaki, Dorothea, Gopalakrishnan, Shyam, Sicheritz-Pontén, Thomas, Olsen, Jesper Velgaard, Cappellini, Enrico, KU, thw266, Christophersen, A., Gilbert, M Thomas P & Vågene, Åshild Joanne, 2020, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 375, 1812, 10 p., 20190584.

      Research output: Contribution to journal › Journal article › Research › peer-review

    17. Published

      Pre-extinction Demographic Stability and Genomic Signatures of Adaptation in the Woolly Rhinoceros

      Lord, E., Dussex, N., Kierczak, M., Díez-del-Molino, D., Ryder, O. A., Stanton, D. W. G., Gilbert, M. T. P., Sánchez-Barreiro, F., Zhang, G., Sinding, M. H. S., Lorenzen, E. D., Willerslev, E., Protopopov, A., Shidlovskiy, F., Fedorov, S., Bocherens, H., Nathan, S. K. S. S., Goossens, B., van der Plicht, J., Chan, Y. L. & 10 others, Prost, S., Potapova, O., Kirillova, I., Lister, A. M., Heintzman, P. D., Kapp, J. D., Shapiro, B., Vartanyan, S., Götherström, A. & Dalén, L., 2020, In: Current Biology. 30, 19, p. 3871-3879, e1-e7 16 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    18. Published

      Progressive Cactus is a multiple-genome aligner for the thousand-genome era

      Armstrong, J., Hickey, G., Diekhans, M., Fiddes, I. T., Novak, A. M., Deran, A., Fang, Q., Xie, D., Feng, S., Stiller, J., Genereux, D., Johnson, J., Marinescu, V. D., Alföldi, J., Harris, R. S., Lindblad-Toh, K., Haussler, D., Karlsson, E., Jarvis, E. D., Zhang, G. & 1 others, Paten, B., 2020, In: Nature. 587, 7833, p. 246-251

      Research output: Contribution to journal › Journal article › Research › peer-review

    19. Published

      Rapid loss of endogenous DNA in pig bone buried in five different environments

      Eriksen, A. M. H., Matthiesen, H., Kontopoulos, I., Gregory, D., Snoeck, C., KU, thw266, Collins, Matthew James & Gilbert, M Thomas P, 2020, In: Archaeometry. 62, 4, p. 827-846 20 p.

      Research output: Contribution to journal › Review › Research › peer-review

    20. Published

      The evolutionary history of extinct and living lions

      de Manuel, M., Barnett, R., Sandoval-Velasco, M., Yamaguchi, N., Vieira, F. G., Mendoza, M. L. Z., Liu, S., Martin, M. D., Sinding, M-H. S., Mak, S. S. T., Caroe, C., Liu, S., Guo, C., Zheng, J., Zazula, G., Baryshnikov, G., Eizirik, E., Koepfli, K-P., Johnson, W. E., Antunes, A. & 9 others, Sicheritz-Pontén, Thomas, Gopalakrishnan, Shyam, Larson, G., Yang, H., O'Brien, S. J., Hansen, Anders Johannes, KU, thw266, Marques-Bonet, T. & Gilbert, M Thomas P, 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 20, p. 10927-10934 8 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    21. Published

      The gene expression network regulating queen brain remodeling after insemination and its parallel use in ants with reproductive workers

      Nagel, M., Qiu, Bitao, Brandenborg, L. E., Larsen, Rasmus Stenbak, Ning, D., Boomsma, Jacobus J. & KU, thw266, 2020, In: Science Advances. 6, 38, 17 p., eaaz5772.

      Research output: Contribution to journal › Journal article › Research › peer-review

    22. Published

      The origin of domestication genes in goats

      Zheng, Z., Wang, X., Li, M., Li, Y., Yang, Z., Wang, X., Pan, X., Gong, M., Zhang, Y., Guo, Y., Wang, Y., Liu, J., Cai, Y., Chen, Q., Okpeku, M., Colli, L., Cai, D., Wang, K., Huang, S., Sonstegard, T. S. & 16 others, Esmailizadeh, A., Zhang, W., Zhang, T., Xu, Y., Xu, N., Yang, Y., Han, J., Chen, L., Lesur, J., Daly, K. G., Bradley, D. G., Heller, Rasmus, KU, thw266, Wang, W., Chen, Y. & Jiang, Y., 2020, In: Science Advances. 6, 21, eaaz5216.

      Research output: Contribution to journal › Journal article › Research › peer-review

    ID: 40294134