Michael Kuhl

Michael Kuhl

Professor


  1. 2024
  2. Published

    Editorial: Optics and ecophysiology of coral reef organisms: volume II

    Bollati, Elena, Wangpraseurt, D., Larkum, A. W. D., Ferrier-Pagès, C. & Kühl, Michael, 2024, In: Frontiers in Marine Science. 11, 3 p., 1367849.

    Research output: Contribution to journalEditorialpeer-review

  3. Published

    Intra-colony spatial variance of oxyregulation and hypoxic thresholds for key Acropora coral species

    Dilernia, N. J., Woodcock, S., Camp, E. F., Hughes, D. J., Kühl, Michael & Suggett, D. J., 2024, In: Ecology and Evolution. 14, 3, 16 p., e11100.

    Research output: Contribution to journalJournal articlepeer-review

  4. Published

    Seafloor primary production in a changing Arctic Ocean

    Attard, K., Singh, R. K., Gattuso, J. P., Filbee-Dexter, K., Krause-Jensen, D., Kühl, Michael, Sejr, M. K., Archambault, P., Babin, M., Bélanger, S., Berg, P., Glud, R. N., Hancke, K., Jänicke, S., Qin, J., Rysgaard, S., Sørensen, E. B., Tachon, F., Wenzhöfer, F. & Ardyna, M., 2024, In: Proceedings of the National Academy of Sciences of the United States of America. 121, 11, 10 p., e2303366121.

    Research output: Contribution to journalJournal articlepeer-review

  5. E-pub ahead of print

    Seagrass-mediated rhizosphere redox gradients are linked with ammonium accumulation driven by diazotrophs

    Brodersen, Kasper Elgetti, Moßhammer, Maria, Bittner, Meriel Jennifer, Hallstrøm, S., Santner, J., Riemann, Lasse & Kühl, Michael, 2024, (E-pub ahead of print) In: Microbiology Spectrum.

    Research output: Contribution to journalJournal articlepeer-review

  6. 2023
  7. Published

    Biofilm formation and cell plasticity drive diazotrophy in an anoxygenic phototrophic bacterium

    Fernandez Juarez, Victor, Hallstrøm, S., Pacherres, Cesar, Wang, J., Coll-Garcia, G., Kühl, Michael & Riemann, Lasse, 2023, In: Applied and Environmental Microbiology. 89, 11, p. 1-19 19 p.

    Research output: Contribution to journalJournal articlepeer-review

  8. Published

    Every refuge has its price: Ostreobium as a model for understanding how algae can live in rock and stay in business

    Tandon, K., Pasella, M. M., Iha, C., Ricci, F., Hu, J., O'Kelly, C. J., Medina, M., Kühl, Michael & Verbruggen, H., 2023, In: Seminars in Cell and Developmental Biology. 134, p. 27-36 10 p.

    Research output: Contribution to journalReviewpeer-review

  9. Published

    Fine-scale mapping of physicochemical and microbial landscapes of the coral skeleton

    Ricci, F., Tandon, K., Moßhammer, Maria, Cho, E. H. J., Blackall, L. L., Kühl, Michael & Verbruggen, H., 2023, In: Environmental Microbiology. 25, 8, p. 1505-1521 17 p.

    Research output: Contribution to journalJournal articlepeer-review

  10. Published

    Microplastic pollution associated with reduced respiration in seagrass (Zostera marina L.) and associated epiphytes

    Molin, J. M., Groth-Andersen, W. E., Hansen, Per Juel, Kühl, Michael & Brodersen, Kasper Elgetti, 2023, In: Frontiers in Marine Science. 10, 14 p., 1216299.

    Research output: Contribution to journalJournal articlepeer-review

  11. Published

    Microscale imaging sheds light on species-specific strategies for photo-regulation and photo-acclimation of microphytobenthic diatoms

    Jesus, B., Jauffrais, T., Trampe, Erik, Méléder, V., Ribeiro, L., Bernhard, J. M., Geslin, E. & Kühl, Michael, 2023, In: Environmental Microbiology. 25, 12, p. 3087-3103 17 p.

    Research output: Contribution to journalJournal articlepeer-review

  12. Published

    Modeling the radiative, thermal and chemical microenvironment of 3D scanned corals

    Murthy, Swathi, Picioreanu, C. & Kühl, Michael, 2023, In: Frontiers in Marine Science. 10, 17 p., 1160208.

    Research output: Contribution to journalJournal articlepeer-review

  13. Published

    Non-invasive investigation of the morphology and optical properties of the upside-down jellyfish Cassiopea with optical coherence tomography

    Lyndby, N. H., Murthy, Swathi, Bessette, S., Jakobsen, S. L., Meibom, A. & Kühl, Michael, 2023, In: Proceedings of the Royal Society B: Biological Sciences. 290, 2007, 11 p., 20230127.

    Research output: Contribution to journalJournal articlepeer-review

  14. Published

    Photosynthetic capacity in seagrass seeds and early-stage seedlings of Zostera marina

    Brodersen, Kasper Elgetti & Kühl, Michael, 2023, In: New Phytologist. 239, 4, 15 p.

    Research output: Contribution to journalJournal articlepeer-review

  15. Published

    The mesoglea buffers the physico-chemical microenvironment of photosymbionts in the upside-down jellyfish Cassiopea sp.

    Lyndby, N. H., Murray, M. C., Trampe, Erik, Meibom, A. & Kühl, Michael, 2023, In: Frontiers in Ecology and Evolution. 11, 12 p., 1112742.

    Research output: Contribution to journalJournal articlepeer-review

  16. Published

    The role of host pigments in coral photobiology

    Ferreira, G., Bollati, Elena & Kühl, Michael, 2023, In: Frontiers in Marine Science. 10, 14 p., 1204843.

    Research output: Contribution to journalReviewpeer-review

  17. 2022
  18. Published

    Biophysical properties at patch scale shape the metabolism of biofilm landscapes

    Depetris, A., Tagliavini, G., Peter, H., Kühl, Michael, Holzner, M. & Battin, T. J., 2022, In: npj Biofilms and Microbiomes. 8, 12 p., 5.

    Research output: Contribution to journalJournal articlepeer-review

  19. Published

    Deoxygenation lowers the thermal threshold of coral bleaching: [Inkl. Correction]

    Alderdice, R., Perna, G., Cárdenas, A., Hume, B. C. C., Wolf, M., Kühl, Michael, Pernice, M., Suggett, D. J. & Voolstra, C. R., 2022, In: Scientific Reports. 12, 14 p., 18273.

    Research output: Contribution to journalJournal articlepeer-review

  20. Published

    Disentangling compartment functions in sessile marine invertebrates

    Hughes, D. J., Raina, J., Nielsen, D. A., Suggett, D. J. & Kühl, Michael, 2022, In: Trends in Ecology & Evolution. 37, 9, p. 740-748 9 p.

    Research output: Contribution to journalJournal articlepeer-review

  21. Published

    Disparate Inventories of Hypoxia Gene Sets Across Corals Align With Inferred Environmental Resilience

    Alderdice, R., Hume, B. C. C., Kühl, Michael, Pernice, M., Suggett, D. J. & Voolstra, C. R., 2022, In: Frontiers in Marine Science. 9, 14 p., 834332.

    Research output: Contribution to journalJournal articlepeer-review

  22. Published

    Editorial: Ecophysiology and biogeochemistry of marine plants in the anthropocene

    Brodersen, Kasper Elgetti, Trevathan-Tackett, S. M., Noisette, F., Björk, M., Larkum, A. W. D., Holmer, M. & Kühl, Michael, 2022, In: Frontiers in Marine Science. 9, 4 p., 1010651.

    Research output: Contribution to journalEditorialpeer-review

  23. Published

    Effects of Epiphytes on the Seagrass Phyllosphere

    Brodersen, Kasper Elgetti & Kühl, Michael, 2022, In: Frontiers in Marine Science. 9, 10 p., 821614.

    Research output: Contribution to journalReviewpeer-review

  24. Published

    Effects of Epiphytic Biofilm Activity on the Photosynthetic Activity, pH and Inorganic Carbon Microenvironment of Seagrass Leaves (Zostera marina L.)

    Zhang, Q., Kühl, Michael & Brodersen, Kasper Elgetti, 2022, In: Frontiers in Marine Science. 9, 11 p., 835381.

    Research output: Contribution to journalJournal articlepeer-review

  25. Published

    Genomic view of the diversity and functional role of archaea and bacteria in the skeleton of the reef-building corals Porites lutea and Isopora palifera

    Tandon, K., Ricci, F., Costa, J., Medina, M., Kühl, Michael, Blackall, L. L. & Verbruggen, H., 2022, In: GigaScience. 12, 12 p., giac127.

    Research output: Contribution to journalJournal articlepeer-review

  26. Published

    Green fluorescent protein-like pigments optimise the internal light environment in symbiotic reef-building corals

    Bollati, Elena, Lyndby, N. H., D’angelo, C., Kühl, Michael, Wiedenmann, J. & Wangpraseurt, D., 2022, In: eLife. 11, 24 p., e73521.

    Research output: Contribution to journalJournal articlepeer-review

  27. Published

    Hypoxia as a physiological cue and pathological stress for coral larvae

    Alderdice, R., Pernice, M., Cárdenas, A., Hughes, D. J., Harrison, P. L., Boulotte, N., Chartrand, K., Kühl, Michael, Suggett, D. J. & Voolstra, C. R., 2022, In: Molecular Ecology. 31, 2, p. 571-587 17 p.

    Research output: Contribution to journalJournal articlepeer-review

  28. Published

    Kleptoplast distribution, photosynthetic efficiency and sequestration mechanisms in intertidal benthic foraminifera

    Jesus, B., Jauffrais, T., Trampe, Erik, Goessling, J. W., Lekieffre, C., Meibom, A., Kühl, Michael & Geslin, E., 2022, In: ISME Journal. 16, 3, p. 822-832 11 p.

    Research output: Contribution to journalJournal articlepeer-review

  29. Published

    Metabolic Profiling of Interspecies Interactions During Sessile Bacterial Cultivation Reveals Growth and Sporulation Induction in Paenibacillus amylolyticus in Response to Xanthomonas retroflexus

    Herschend, J., Ernst, M., Koren, K., Melnik, A. V., da Silva, R. R., Røder, Henriette Lyng, Damholt, Z. B. V., Hägglund, Per Mårten, Svensson, B., Sørensen, Søren Johannes, Kühl, Michael, Dorrestein, P. C. & Burmølle, Mette, 2022, In: Frontiers in Cellular and Infection Microbiology. 12, 17 p., 805473.

    Research output: Contribution to journalJournal articlepeer-review

  30. Published

    Non-invasive estimation of coral polyp volume and surface area using optical coherence tomography

    Jaffe, J. S., Schull, S., Kühl, Michael & Wangpraseurt, D., 2022, In: Frontiers in Marine Science. 9, 1049440.

    Research output: Contribution to journalJournal articlepeer-review

  31. Published

    Oxygen-sensitive nanoparticles reveal the spatiotemporal dynamics of oxygen reduction during magnesium implant biodegradation

    Zeller-Plumhoff, B., Akkineni, A. R., Helmholz, H., Orlov, D., Moßhammer, Maria, Kühl, Michael, Willumeit-Roemer, R. & Gelinsky, M., 2022, In: npj Materials Degradation. 6, 8 p., 95.

    Research output: Contribution to journalJournal articlepeer-review

  32. Published

    Possible Functional Roles of Patellamides in the Ascidian-Prochloron Symbiosis

    Baur, P., Kühl, Michael, Comba, P. & Behrendt, L., 2022, In: Marine Drugs. 20, 2, 20 p., 119.

    Research output: Contribution to journalReviewpeer-review

  33. Published

    Temperature Effects on Leaf and Epiphyte Photosynthesis, Bicarbonate Use and Diel O2 Budgets of the Seagrass Zostera marina L.

    Hansen, A. B., Pedersen, A. S., Kühl, Michael & Brodersen, Kasper Elgetti, 2022, In: Frontiers in Marine Science. 9, 13 p., 822485.

    Research output: Contribution to journalJournal articlepeer-review

  34. Published

    The structure-function relationship of Pseudomonas aeruginosa in infections and its influence on the microenvironment

    Lichtenberg, Mads, Jakobsen, Tim Holm, Kühl, Michael, Kolpen, Mette, Jensen, Peter Østrup & Bjarnsholt, Thomas, 2022, In: FEMS Microbiology Reviews. 46, 5, 13 p., fuac018.

    Research output: Contribution to journalJournal articlepeer-review

  35. Published

    Think outside the box: 3D bioprinting concepts for biotechnological applications – recent developments and future perspectives

    Krujatz, F., Dani, S., Windisch, J., Emmermacher, J., Hahn, F., Moßhammer, Maria, Murthy, Swathi, Steingröwer, J., Walther, T., Kühl, Michael, Gelinsky, M. & Lode, A., 2022, In: Biotechnology Advances. 58, 20 p., 107930.

    Research output: Contribution to journalJournal articlepeer-review

  36. Published

    Widespread oxyregulation in tropical corals under hypoxia

    Hughes, D. J., Alexander, J., Cobbs, G., Kühl, Michael, Cooney, C., Pernice, M., Varkey, D., Voolstra, C. R. & Suggett, D. J., 2022, In: Marine Pollution Bulletin. 179, 9 p., 113722.

    Research output: Contribution to journalJournal articlepeer-review

  37. 2021
  38. Published

    Divergent expression of hypoxia response systems under deoxygenation in reef-forming corals aligns with bleaching susceptibility

    Alderdice, R., Suggett, D. J., Cárdenas, A., Hughes, D. J., Kühl, Michael, Pernice, M. & Voolstra, C. R., 2021, In: Global Change Biology. 27, 2, p. 312-326 15 p.

    Research output: Contribution to journalJournal articlepeer-review

  39. Published

    Frustule Photonics and Light Harvesting Strategies in Diatoms

    Goessling, J. W., Su, Y., Kühl, Michael & Ellegaard, Marianne, 2021, Diatom Morphogenesis. Wiley, p. 269-300 32 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  40. Published

    Hyperspectral Luminescence Imaging in Combination with Signal Deconvolution Enables Reliable Multi-Indicator-Based Chemical Sensing

    Zieger, S. E., Moßhammer, Maria, Kühl, Michael & Koren, K., 2021, In: ACS Sensors. 6, 1, p. 183-191

    Research output: Contribution to journalJournal articlepeer-review

  41. Published

    In-Situ Metatranscriptomic Analyses Reveal the Metabolic Flexibility of the Thermophilic Anoxygenic Photosynthetic Bacterium Chloroflexus aggregans in a Hot Spring Cyanobacteria-Dominated Microbial Mat

    Kawai, S., Martinez, J. N., Lichtenberg, Mads, Trampe, Erik, Kühl, Michael, Tank, M., Haruta, S., Nishihara, A., Hanada, S. & Thiel, V., 2021, In: Microorganisms. 9, 3, 22 p., 652.

    Research output: Contribution to journalJournal articlepeer-review

  42. Published

    Morphogenesis and oxygen dynamics in phototrophic biofilms growing across a gradient of hydraulic conditions

    Depetris, A., Peter, H., Bordoloi, A. D., Bernard, H., Niayifar, A., Kühl, Michael, de Anna, P. & Battin, T. J., 2021, In: iScience. 24, 2, 29 p., 102067.

    Research output: Contribution to journalJournal articlepeer-review

  43. Published

    Multiphysics modelling of photon, mass and heat transfer in coral microenvironments

    Taylor Parkins, S. K., Murthy, Swathi, Picioreanu, C. & Kühl, Michael, 2021, In: Journal of the Royal Society. Interface. 18, 182, 15 p., 20210532.

    Research output: Contribution to journalJournal articlepeer-review

  44. Published

    Nitric-oxide-driven oxygen release in anoxic Pseudomonas aeruginosa

    Lichtenberg, Mads, Line, L., Schrameyer, V., Jakobsen, Tim Holm, Rybtke, Morten Levin, Toyofuku, M., Nomura, N., Kolpen, Mette, Tolker-Nielsen, Tim, Kühl, Michael, Bjarnsholt, Thomas & Jensen, Peter Østrup, 2021, In: iScience. 24, 12, 103404.

    Research output: Contribution to journalJournal articlepeer-review

  45. Published

    Photosynthesis from stolen chloroplasts can support sea slug reproductive fitness

    Cartaxana, P., Rey, F., LeKieffre, C., Lopes, D., Hubas, C., Spangenberg, J. E., Escrig, S., Jesus, B., Calado, G., Domingues, R., Kühl, Michael, Calado, R., Meibom, A. & Cruz, S., 2021, In: Proceedings of the Royal Society B: Biological Sciences. 288, 1959, 9 p., 20211779.

    Research output: Contribution to journalJournal articlepeer-review

  46. Published

    Resolving Chemical Gradients Around Seagrass Roots - A Review of Available Methods

    Scholz, V. V., Brodersen, Kasper Elgetti, Kühl, Michael & Koren, K., 2021, In: Frontiers in Marine Science. 8, 10 p., 771382.

    Research output: Contribution to journalJournal articlepeer-review

  47. 2020
  48. Published

    Vertical Migration Optimizes Photosynthetic Efficiency of Motile Cyanobacteria in a Coastal Microbial Mat

    Lichtenberg, Mads, Cartaxana, P. & Kühl, Michael, 25 May 2020, In: Frontiers in Marine Science. 7, 13 p., 359.

    Research output: Contribution to journalJournal articlepeer-review

  49. Published

    Amoebocytes facilitate efficient carbon and nitrogen assimilation in the Cassiopea-Symbiodiniaceae symbiosis

    Lyndby, N. H., Rädecker, N., Bessette, S., Søgaard Jensen, L. H., Escrig, S., Trampe, Erik, Kühl, Michael & Meibom, A., 2020, In: Proceedings of the Royal Society B: Biological Sciences. 287, 1941, 10 p., 20202393.

    Research output: Contribution to journalJournal articlepeer-review

  50. Published

    Bionic 3D printed corals

    Wangpraseurt, D., You, S., Azam, F., Jacucci, G., Gaidarenko, O., Hildebrand, M., Kühl, Michael, Smith, A. G., Davey, M. P., Smith, A., Deheyn, D. D., Chen, S. & Vignolini, S., 2020, In: Nature Communications. 11, 8 p., 1748.

    Research output: Contribution to journalJournal articlepeer-review

  51. Published

    Coral reef survival under accelerating ocean deoxygenation

    Hughes, D. J., Alderdice, R., Cooney, C., Kühl, Michael, Pernice, M., Voolstra, C. R. & Sugget, D. J., 2020, In: Nature Climate Change. 10, 4, p. 296–307

    Research output: Contribution to journalJournal articlepeer-review

  52. Published

    Effect of temperature and feeding on carbon budgets and O2 dynamics in Pocillopora damicornis

    Lyndby, N. H., Holm, J. B., Wangpraseurt, D., Grover, R., Rottier, C., Kühl, Michael & Ferrier-Pagès, C., 2020, In: Marine Ecology Progress Series. 652, p. 49-62 14 p.

    Research output: Contribution to journalJournal articlepeer-review

  53. Published

    Evaluation of Ebselen-azadioxatriangulenium as redox-sensitive fluorescent intracellular probe and as indicator within a planar redox optode

    Koren, K., Salinas, N. K. G., Santella, M., Moßhammer, Maria, Müller, M., Dmitriev, R. I., Borisov, S. M., Kühl, Michael & Laursen, Bo Wegge, 2020, In: Dyes and Pigments. 173, 9 p., 107866.

    Research output: Contribution to journalJournal articlepeer-review

  54. Published

    Flow and epiphyte growth effects on the thermal, optical and chemical microenvironment in the leaf phyllosphere of seagrass (Zostera marina)

    Noisette, F., Depetris, A., Kühl, Michael & Brodersen, Kasper Elgetti, 2020, In: Journal of the Royal Society Interface. 17, 171, 2020.0485.

    Research output: Contribution to journalJournal articlepeer-review

  55. Published

    Functional kleptoplasts intermediate incorporation of carbon and nitrogen in cells of the Sacoglossa sea slug Elysia viridis

    Cruz, S., LeKieffre, C., Cartaxana, P., Hubas, C., Thiney, N., Jakobsen, S., Escrig, S., Jesus, B., Kühl, Michael, Calado, R. & Meibom, A., 2020, In: Scientific Reports. 10, 12 p., 10548.

    Research output: Contribution to journalJournal articlepeer-review

  56. Published

    Fungi and viruses as important players in microbial mats

    Carreira, C., Lønborg, C., Kühl, Michael, Lillebø, A. I., Sandaa, R., Villanueva, L. & Cruz, S., 2020, In: FEMS Microbiology Ecology. 96, 11, 13 p., fiaa187.

    Research output: Contribution to journalReviewpeer-review

  57. Published

    Imaging O2 dynamics and microenvironments in the seagrass leaf phyllosphere with magnetic optical sensor nanoparticles

    Brodersen, Kasper Elgetti, Kühl, Michael, Trampe, Erik & Koren, K., 2020, In: Plant Journal. 104, 6, p. 1504-1519

    Research output: Contribution to journalJournal articlepeer-review

  58. Published

    Life in the dark: far-red absorbing cyanobacteria extend photic zones deep into terrestrial caves

    Behrendt, L., Trampe, Erik, Nord, N. B., Nguyen, J., Kühl, Michael, Lonco, D., Nyarko, A., Dhinojwala, A., Hershey, O. S. & Barton, H., 2020, In: Environmental Microbiology. 22, 3, p. 952-963

    Research output: Contribution to journalJournal articlepeer-review

  59. Published

    PhenoChip: A single-cell phenomic platform for high-throughput photophysiological analyses of microalgae

    Behrendt, L., Mehdi Salek, M., Trampe, Erik, Fernandez, V. I., Lee, K. S., Kühl, Michael & Stocker, R., 2020, In: Science Advances. 6, 36, 14 p., eabb2754.

    Research output: Contribution to journalJournal articlepeer-review

  60. Published

    Strong leaf surface basification and CO2 limitation of seagrass induced by epiphytic biofilm microenvironments

    Brodersen, Kasper Elgetti, Koren, K., Revsbech, N. P. & Kühl, Michael, 2020, In: Plant, Cell and Environment. 43, 1, p. 174-187

    Research output: Contribution to journalJournal articlepeer-review

  61. Published

    Substantial near-infrared radiation-driven photosynthesis of chlorophyll f-containing cyanobacteria in a natural habitat

    Kühl, Michael, Trampe, Erik, Moßhammer, Maria, Johnson, M., Larkum, A. W. D., Frigaard, Niels-Ulrik & Koren, K., 2020, In: eLife. 9, 15 p., e50871.

    Research output: Contribution to journalJournal articlepeer-review

  62. Published

    Synoptic spatio-temporal variability of the photosynthetic productivity of microphytobenthos and phytoplankton in a tidal estuary

    Frankenbach, S., Ezequiel, J., Plecha, S., Goessling, J. W., Vaz, L., Kühl, Michael, Dias, J. M., Vaz, N. & Serôdio, J., 2020, In: Frontiers in Marine Science. 7, 22 p., 170.

    Research output: Contribution to journalJournal articlepeer-review

  63. 2019
  64. Published

    Beneath the surface: community assembly and functions of the coral skeleton microbiome

    Ricci, F., Marcelino, V. R., Blackall, L. L., Kühl, Michael, Medina, M. & Verbruggen, H., 2019, In: Microbiome. 7, 10 p., 159.

    Research output: Contribution to journalJournal articlepeer-review

  65. Published

    Bio-optical properties and radiative energy budgets in fed and unfed scleractinian corals (Pocillopora sp.) during thermal bleaching

    Heidelberg Lyndby, N., Holm, J. B., Wangpraseurt, D., Ferrier-Pagès, C. & Kühl, Michael, 2019, In: Marine Ecology - Progress Series. 629, p. 1-17

    Research output: Contribution to journalJournal articlepeer-review

  66. Published

    Correlation of bio-optical properties with photosynthetic pigment and microorganism distribution in microbial mats from Hamelin Pool, Australia

    Fisher, A., Wangpraseurt, D., Larkum, A. W. D., Johnson, M., Kühl, Michael, Chen, M., Wong, H. L. & Burns, B. P., 2019, In: F E M S Microbiology Ecology. 95, 1, p. 1-13 fiy219.

    Research output: Contribution to journalJournal articlepeer-review

  67. Published

    Editorial: Optics and Ecophysiology of Coral Reef Organisms

    Wangpraseurt, D., Larkum, A. W. D., Ferrier-Pagès, C., Salih, A., Warner, M. E., Dubinsky, Z. & Kühl, Michael, 2019, In: Frontiers in Marine Science. 6, 3 p., 742.

    Research output: Contribution to journalEditorialpeer-review

  68. Published

    Elevated CO2 leads to enhanced photosynthesis but decreased growth in early life stages of reef building coralline algae

    Ordoñez, A., Wangpraseurt, D., Lyndby, N. H., Kühl, Michael & Diaz-Pulida, G., 2019, In: Frontiers in Marine Science. 5, p. 1-11 495.

    Research output: Contribution to journalJournal articlepeer-review

  69. Published

    In situ quantification of local O2 concentration in 3D bioprinted constructs using luminescent nanoparticles

    Gelinsky, M., Akkineni, A. R., Trampe, Erik, Koren, K., Lode, A., Krujatz, F. & Kühl, Michael, 2019, Society for Biomaterials Annual Meeting and Exposition 2019: The Pinnacle of Biomaterials Innovation and Excellence - Transactions of the 42nd Annual Meeting. Society for Biomaterials, p. 135 1 p. (Transactions of the Annual Meeting of the Society for Biomaterials and the Annual International Biomaterials Symposium, Vol. 40).

    Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearchpeer-review

  70. Published

    Luminescence Lifetime Imaging of O2 with a Frequency-Domain-Based Camera System

    Moßhammer, Maria, Scholz, V. V., Holst, G., Kühl, Michael & Koren, K., 2019, In: Journal of Visualized Experiments. 154, 10 p., e60191.

    Research output: Contribution to journalJournal articlepeer-review

  71. Published

    Luminescence lifetime imaging of chemical sensors – a comparison between time-domain and frequency-domain based camera systems

    Koren, K., Moßhammer, Maria, Scholz, V. V., Borisov, S. M., Holst, G. & Kühl, Michael, 2019, In: Analytical Chemistry. 91, 5, p. 3233-3238

    Research output: Contribution to journalJournal articlepeer-review

  72. Published

    Measuring light scattering and absorption in corals with Inverse Spectroscopic Optical Coherence Tomography (ISOCT): a new tool for non-invasive monitoring

    Spicer, G. L. C., Eid, A., Wangpraseurt, D., Swain, T. D., Winkelmann, J. A., Yi, J., Kühl, Michael, Marcelino, L. A. & Backman, V., 2019, In: Scientific Reports. 9, 12 p., 14148.

    Research output: Contribution to journalJournal articlepeer-review

  73. Published

    Microscale light management and inherent optical properties of intact corals studied with optical coherence tomography

    Wangpraseurt, D., Jacques, S. L., Lundby, N., Holm, J. B., Ferrier-Pagès, C. & Kühl, Michael, 2019, In: Journal of the Royal Society. Interface. 16, 151, p. 1-10 20180567.

    Research output: Contribution to journalJournal articlepeer-review

  74. Published

    Nanoparticle- and microparticle-based luminescence imaging of chemical species and temperature in aquatic systems: a review

    Moßhammer, Maria, Brodersen, Kasper Elgetti, Kühl, Michael & Koren, K., 2019, In: Microchimica Acta. 186, p. 1-28 126.

    Research output: Contribution to journalReviewpeer-review

  75. Published

    Optical Properties of Corals Distort Variable Chlorophyll Fluorescence Measurements

    Wangpraseurt, D., Lichtenberg, Mads, Jacques, S. L., Larkum, A. W. D. & Kühl, Michael, 2019, In: Plant Physiology. 179, 4, p. 1608-1619

    Research output: Contribution to journalJournal articlepeer-review

  76. Published

    Optical properties of living corals determined with diffuse reflectance spectroscopy

    Jacques, S. L., Wangpraseurt, D. & Kühl, Michael, 2019, In: Frontiers in Marine Science. 6, 9 p., 472.

    Research output: Contribution to journalJournal articlepeer-review

  77. Published

    Radiative energy budgets in a microbial mat under different irradiance and tidal conditions

    Haro, S., Brodersen, Kasper Elgetti, Bohórquez, J., Papaspyrou, S., Corzo, A. & Kühl, Michael, 2019, In: Microbial Ecology. 77, 4, p. 852-865

    Research output: Contribution to journalJournal articlepeer-review

  78. Published

    Vertical Distribution and Diversity of Phototrophic Bacteria within a Hot Spring Microbial Mat (Nakabusa Hot Springs, Japan)

    Martinez, J. N., Nishihara, A., Lichtenberg, Mads, Trampe, Erik, Kawai, S., Tank, M., Kühl, Michael, Hanada, S. & Thiel, V., 2019, In: Microbes and Environments. 34, 4, p. 374-387 14 p.

    Research output: Contribution to journalJournal articlepeer-review

  79. 2018
  80. Published

    In Vitro Community Synergy between Bacterial Soil Isolates Can Be Facilitated by pH Stabilization of the Environment

    Herschend, J., Koren, K., Røder, Henriette Lyng, Brejnrod, A., Kühl, Michael & Burmølle, Mette, 2018, In: Applied and Environmental Microbiology. 84, 21, e01450.

    Research output: Contribution to journalJournal articlepeer-review

  81. Published

    In situ metabolomic- and transcriptomic-profiling of the host-associated cyanobacteria Prochloron and Acaryochloris marina

    Behrendt, L., Raina, J., Lutz, A., Kot, W., Albertsen, M., Nielsen, P. H., Sørensen, Søren Johannes, Larkum, A. W. D. & Kühl, Michael, 2018, In: I S M E Journal. 12, p. 556–567 12 p.

    Research output: Contribution to journalJournal articlepeer-review

  82. Published

    In vitro community synergy between bacterial soil isolates can be facilitated by pH stabilisation of the environment.

    Herschend, J., Koren, K., Røder, Henriette Lyng, Brejnrod, A. D., Kühl, Michael & Burmølle, Mette, 2018, In: Applied and Environmental Microbiology. 84, 21, p. 1-15 e01450-18.

    Research output: Contribution to journalJournal articlepeer-review

  83. Published

    Symbiodinium-induced formation of microbialites: mechanistic insights from in vitro experiments and the prospect of its occurrence in nature

    Frommlet, J. C., Wangpraseurt, D., Sousa, M. L., Guimarães, B., da Silva, M. M., Kühl, Michael & Serôdio, J., 2018, In: Frontiers in Microbiology. 9, 18 p., 998.

    Research output: Contribution to journalJournal articlepeer-review

  84. Published

    Contrasting impacts of light reduction on sediment biogeochemistry in deep- and shallow-water tropical seagrass assemblages (Green Island, Great Barrier Reef)

    Schrameyer, V., York, P. H., Chartrand, K., Ralph, P. J., Kühl, Michael, Brodersen, Kasper Elgetti & Rasheed, M. A., 2018, In: Marine Environmental Research. 136, p. 38–47 10 p.

    Research output: Contribution to journalJournal articlepeer-review

  85. Published

    Differences in the optical properties of valve and girdle band in a centric diatom

    Gössling, J. W., Su, Y., Maibohm, C., Ellegaard, Marianne & Kühl, Michael, 2018, In: Interface Focus. 9, 1, 20180031.

    Research output: Contribution to journalJournal articlepeer-review

  86. Published

    Extracellular hydrogen peroxide measurements using a flow injection system in combination with microdialysis probes – potential and challenges

    Moßhammer, Maria, Schrameyer, V., Jensen, Peter Østrup, Koren, K. & Kühl, Michael, 2018, In: Free Radical Biology & Medicine. 128, p. 111-123

    Research output: Contribution to journalJournal articlepeer-review

  87. Published

    Flow Injection analysis with microdialysis probes enable minimally invasive and dynamic H2O2 measurements

    Moßhammer, Maria, Koren, K. & Kühl, Michael, 2018, In: Proceedings. 2, 4 p., 992.

    Research output: Contribution to journalConference articlepeer-review

  88. Published

    Functionalized Bioink with Optical Sensor Nanoparticles for O2 Imaging in 3D-Bioprinted Constructs

    Trampe, Erik, Koren, K., Akkineni, A. R., Senwitz, C., Krujatz, F., Lode, A., Gelinsky, M. & Kühl, Michael, 2018, In: Advanced Functional Materials. 28, 45, 1804411.

    Research output: Contribution to journalJournal articlepeer-review

  89. Published

    Modulation of the light field related to valve optical properties of raphid diatoms: implications for niche differentiation in the microphytobenthos

    Gössling, J. W., Frankenbach, S., Ribeiro, L., Serôdio, J. & Kühl, Michael, 2018, In: Marine Ecology - Progress Series. 588, p. 29–42 14 p.

    Research output: Contribution to journalJournal articlepeer-review

  90. Published

    Optical O2 sensing in aquatic systems and organisms

    Koren, K. & Kühl, Michael, 2018, Quenched-phosphorescence detection of molecular oxygen: applications in life sciences. Papkovsky, D. B. & Dmitriev, R. I. (eds.). Royal Society of Chemistry, p. 145-174 30 p. (RSC Detection Science).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  91. Published

    Rhizome, Root/Sediment interactions, Aerenchyma and Internal Pressure Changes in Seagrasses

    Brodersen, Kasper Elgetti, Kühl, Michael, Nielsen, D. A., Pedersen, Ole & Larkum, A. W. D., 2018, Seagrasses of Australia: Structure, Ecology and Conservation. Larkum, A. W. D., Kendrick, G. A. & Ralph, P. J. (eds.). Springer, p. 393-418 26 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  92. Submitted

    SENSOR FUNCTIONALIZED BIOINK

    Kühl, Michael, Koren, K., Trampe, Erik, Gelinsky, M., Lode, A., Krujatz, F. & Akkineni, A. R., 2018, (Submitted) Patent No. 18166802.1 - 1102, 12 Apr 2018

    Research output: Patent

  93. Published

    Seagrass rhizosphere microenvironment alters plant-associated microbial community composition

    Brodersen, Kasper Elgetti, Siboni, N., Nielsen, D. A., Pernice, M., Ralph, P. J., Seymour, J. & Kühl, Michael, 2018, In: Environmental Microbiology. 20, 8, p. 2854-2864

    Research output: Contribution to journalJournal articlepeer-review

  94. Published

    Structure-based optics of centric diatom frustules: modulation of the in vivo light field for efficient diatom photosynthesis

    Gössling, J. W., Su, Y., Sousa Dias Cartaxana, P. J., Maibohm, C., Rickelt, L. F., Trampe, Erik, Walby, S. L., Wangpraseurt, D., Wu, X., Ellegaard, Marianne & Kühl, Michael, 2018, In: New Phytologist. 219, 1, p. 122-134 13 p.

    Research output: Contribution to journalJournal articlepeer-review

  95. Published

    Tools for studying growth patterns and chemical dynamics of aggregated Pseudomonas aeruginosa exposed to different electron acceptors in an alginate bead model

    Sønderholm, M., Koren, K., Wangpraseurt, D., Jensen, Peter Østrup, Kolpen, Mette, Kragh, K. N., Bjarnsholt, Thomas & Kühl, Michael, 2018, In: npj Biofilms and Microbiomes. 4, 11 p., 3.

    Research output: Contribution to journalJournal articlepeer-review

  96. 2017
  97. Published

    Hyperbaric oxygen sensitizes anoxic Pseudomonas aeruginosa biofilm to ciprofloxacin

    Kolpen, Mette, Lerche, C. J., Kragh, K. N., Sams, T., Koren, K., Jensen, A. S., Line, L., Bjarnsholt, Thomas, Ciofu, Oana, Moser, Claus Ernst, Kühl, Michael, Høiby, Niels & Jensen, Peter Østrup, Nov 2017, In: Antimicrobial Agents and Chemotherapy. 61, 11, 9 p., e01024-17.

    Research output: Contribution to journalJournal articlepeer-review

  98. Published

    Possibilities and challenges for quantitative optical sensing of hydrogen peroxide

    Moßhammer, Maria, Kühl, Michael & Koren, K., 11 Oct 2017, In: Chemosensors. 5, 4, 23 p., 28.

    Research output: Contribution to journalReviewpeer-review

  99. Published

    Light sheet microscopy imaging of light absorption and photosynthesis distribution in plant tissue

    Lichtenberg, Mads, Trampe, Erik, Vogelmann, T. C. & Kühl, Michael, Oct 2017, In: Plant Physiology. 175, p. 721-733 13 p.

    Research output: Contribution to journalJournal articlepeer-review

  100. Published

    Pseudomonas aeruginosa aggregate formation in an alginate bead model system exhibits In Vivo-like characteristics

    Sønderholm, M., Kragh, K. N., Koren, K., Jakobsen, Tim Holm, Darch, S., Alhede, M., Jensen, Peter Østrup, Whiteley, M., Kühl, Michael & Bjarnsholt, Thomas, May 2017, In: Applied and Environmental Microbiology. 83, 9, 15 p., e00113-17.

    Research output: Contribution to journalJournal articlepeer-review

  101. Published

    Radiative energy budgets of phototrophic surface-associated microbial communities and their photosynthetic efficiency under diffuse and collimated light

    Lichtenberg, Mads, Brodersen, Kasper Elgetti & Kühl, Michael, 28 Mar 2017, In: Frontiers in Microbiology. 8, 17 p., 452.

    Research output: Contribution to journalJournal articlepeer-review

  102. Published

    Diffusion or advection? Mass transfer and complex boundary layer landscapes of the brown alga Fucus vesiculosus

    Lichtenberg, Mads, Nørregaard, R. D. & Kühl, Michael, Mar 2017, In: Journal of the Royal Society. Interface. 14, 128, 20161015.

    Research output: Contribution to journalJournal articlepeer-review

  103. Published

    In vivo microscale measurements of light and photosynthesis during coral bleaching: evidence for the optical feedback loop?

    Wangpraseurt, D., Holm, J. B., Larkum, A. W. D., Pernice, M., Ralph, P. J., Sugget, D. J. & Kühl, Michael, 24 Jan 2017, In: Frontiers in Microbiology. 8, 12 p., 59.

    Research output: Contribution to journalJournal articlepeer-review

  104. Published

    In situ oxygen dynamics and carbon turnover in an intertidal sediment (Skallingen, Denmark)

    Walpersdorf, E. C., Kühl, Michael, Elberling, Bo, Andersen, Thorbjørn Joest, Hansen, Birger, Pejrup, M. & Glud, R. N., 2017, In: Marine Ecology - Progress Series. 566, p. 49-65 17 p.

    Research output: Contribution to journalJournal articlepeer-review

  105. Published

    In vivo imaging of coral tissue and skeleton with optical coherence tomography

    Wangpraseurt, D., Wentzel, C., Jacques, S. J., Wagner, M. & Kühl, Michael, 2017, In: Journal of the Royal Society. Interface. 14, 128, 12 p., 20161003.

    Research output: Contribution to journalJournal articlepeer-review

  106. Published

    Kleptoplast photosynthesis is nutritionally relevant in the sea slug Elysia viridis

    Cartaxana, P., Trampe, Erik, Kühl, Michael & Cruz, S., 2017, In: Scientific Reports. 7, 10 p., 7714.

    Research output: Contribution to journalJournal articlepeer-review

  107. Published

    Microenvironmental characteristics and physiology of biofilms in chronic infections of CF patients are strongly affected by the host immune response

    Jensen, Peter Østrup, Kolpen, Mette, Kragh, K. N. & Kühl, Michael, 2017, In: A P M I S. Acta Pathologica, Microbiologica et Immunologica Scandinavica. 125, 4, p. 276–288 13 p.

    Research output: Contribution to journalReviewpeer-review

  108. Published

    Phototrophic microbes form endolithic biofilms in ikaite tufa columns (SW Greenland)

    Trampe, Erik, Castenholz, R. W., Larsen, Jens Erik Nybo & Kühl, Michael, 2017, In: Environmental Microbiology. 19, 11, p. 4754–4770 17 p.

    Research output: Contribution to journalJournal articlepeer-review

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