Genomic organization of the mouse peroxisome proliferator-activatedreceptor b/d gene: alternative promoter usage and splicing yield transcriptsexhibiting differential translational efficiency
Research output: Contribution to journal › Journal article › Research › peer-review
Peroxisome proliferator-activated receptor (PPAR) b}d is ubiquitously
expressed, but the level of expression differs markedly
between different cell types. In order to determine the molecular
mechanisms governing PPARb}d gene expression, we
have isolated and characterized the mouse gene encoding
PPARb}d. The gene spans approx. 41 kb and comprises 11 exons
of which the six exons located in the 3«-end of the gene are
included in all transcripts. Primer-extension and 5«-rapid ampli-
®cation of cDNA ends experiments revealed the presence of
multiple transcription start points and splice variants, originating
from the use of at least four different promoters. One of these
transcription start points was found to be used predominantly in
all tissues examined. Initiation from this major transcription
start point gives rise to a transcript with a 548 nt 5«-untranslated
leader containing eight upstream AUG codons. We show that
the presence of the 548 nt leader resulted in a low translational
efficiency of the corresponding PPARb}d mRNA and propose,
based on structural features of the 5«-untranslated region, that
translational initiation may be mediated via an internal ribosome
entry site-dependent mechanism.
Original language | English |
---|---|
Journal | Biochemical Journal |
Volume | 366 |
Pages (from-to) | 767-75 |
ISSN | 0264-6021 |
Publication status | Published - 2002 |
Externally published | Yes |
Bibliographical note
Key words: expression, nuclear hormone receptor, translation.
ID: 10242320