Orthologous microsatellites, transposable elements, and DNA deletions correlate with generation time and body mass in neoavian birds

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  • Yanzhu Ji
  • Shaohong Feng
  • Lei Wu
  • Qi Fang
  • Brüniche-Olsen, Anna
  • J. Andrew DeWoody
  • Yalin Cheng
  • Dezhi Zhang
  • Yan Hao
  • Gang Song
  • Yanhua Qu
  • Alexander Suh
  • KU, thw266
  • Shannon J. Hackett
  • Fumin Lei

The rate of mutation accumulation in germline cells can be affected by cell replication and/or DNA damage, which are further related to life history traits such as generation time and body mass. Leveraging the existing datasets of 233 neoavian bird species, here, we investigated whether generation time and body mass contribute to the interspecific variation of orthologous microsatellite length, transposable element (TE) length, and deletion length and how these genomic attributes affect genome sizes. In nonpasserines, we found that generation time is correlated to both orthologous microsatellite length and TE length, and body mass is negatively correlated to DNA deletions. These patterns are less pronounced in passerines. In all species, we found that DNA deletions relate to genome size similarly as TE length, suggesting a role of body mass dynamics in genome evolution. Our results indicate that generation time and body mass shape the evolution of genomic attributes in neoavian birds.

Original languageEnglish
Article numbereabo0099
JournalScience Advances
Volume8
Issue number35
Number of pages11
ISSN2375-2548
DOIs
Publication statusPublished - 2022

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