Genomic and transcriptomic analysis unveils population evolution and development of pesticide resistance in fall armyworm Spodoptera frugiperda
Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt
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Genomic and transcriptomic analysis unveils population evolution and development of pesticide resistance in fall armyworm Spodoptera frugiperda. / Gui, Furong; Lan, Tianming; Zhao, Yue; Guo, Wei; Dong, Yang; Fang, Dongming; Liu, Huan; Li, Haimeng; Wang, Hongli; Hao, Ruoshi; Cheng, Xiaofang; Li, Yahong; Yang, Pengcheng; Sahu, Sunil Kumar; Chen, Yaping; Cheng, Le; He, Shuqi; Liu, Ping; Fan, Guangyi; Lu, Haorong; Hu, Guohai; Dong, Wei; Chen, Bin; Jiang, Yuan; Zhang, Yongwei; Xu, Hanhong; Lin, Fei; Slippers, Bernard; Postma, Alisa; Jackson, Matthew; Abate, Birhan Addisie; Tesfaye, Kassahun; Demie, Aschalew Lemma; Bayeleygne, Meseret Destaw; Degefu, Dawit Tesfaye; Chen, Feng; Kuria, Paul K.; Kinyua, Zachary M.; Liu, Tong-Xian; Yang, Huanming; Huang, Fangneng; Liu, Xin; Sheng, Jun; Kang, Le.
I: Protein & Cell (Print), Bind 13, Nr. 7, 2022, s. 513-531.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt
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TY - JOUR
T1 - Genomic and transcriptomic analysis unveils population evolution and development of pesticide resistance in fall armyworm Spodoptera frugiperda
AU - Gui, Furong
AU - Lan, Tianming
AU - Zhao, Yue
AU - Guo, Wei
AU - Dong, Yang
AU - Fang, Dongming
AU - Liu, Huan
AU - Li, Haimeng
AU - Wang, Hongli
AU - Hao, Ruoshi
AU - Cheng, Xiaofang
AU - Li, Yahong
AU - Yang, Pengcheng
AU - Sahu, Sunil Kumar
AU - Chen, Yaping
AU - Cheng, Le
AU - He, Shuqi
AU - Liu, Ping
AU - Fan, Guangyi
AU - Lu, Haorong
AU - Hu, Guohai
AU - Dong, Wei
AU - Chen, Bin
AU - Jiang, Yuan
AU - Zhang, Yongwei
AU - Xu, Hanhong
AU - Lin, Fei
AU - Slippers, Bernard
AU - Postma, Alisa
AU - Jackson, Matthew
AU - Abate, Birhan Addisie
AU - Tesfaye, Kassahun
AU - Demie, Aschalew Lemma
AU - Bayeleygne, Meseret Destaw
AU - Degefu, Dawit Tesfaye
AU - Chen, Feng
AU - Kuria, Paul K.
AU - Kinyua, Zachary M.
AU - Liu, Tong-Xian
AU - Yang, Huanming
AU - Huang, Fangneng
AU - Liu, Xin
AU - Sheng, Jun
AU - Kang, Le
PY - 2022
Y1 - 2022
N2 - The fall armyworm (FAW), Spodoptera frugiperda, is a destructive pest native to America and has recently become an invasive insect pest in China. Because of its rapid spread and great risks in China, understanding of FAW genetic background and pesticide resistance is urgent and essential to develop effective management strategies. Here, we assembled a chromosome-level genome of a male FAW (SFynMstLFR) and compared re-sequencing results of the populations from America, Africa, and China. Strain identification of 163 individuals collected from America, Africa and China showed that both C and R strains were found in the American populations, while only C strain was found in the Chinese and African populations. Moreover, population genomics analysis showed that populations from Africa and China have close relationship with significantly genetic differentiation from American populations. Taken together, FAWs invaded into China were most likely originated from Africa. Comparative genomics analysis displayed that the cytochrome p450 gene family is extremely expanded to 425 members in FAW, of which 283 genes are specific to FAW. Treatments of Chinese populations with twenty-three pesticides showed the variant patterns of transcriptome profiles, and several detoxification genes such as AOX, UGT and GST specially responded to the pesticides. These findings will be useful in developing effective strategies for management of FAW in China and other invaded areas.
AB - The fall armyworm (FAW), Spodoptera frugiperda, is a destructive pest native to America and has recently become an invasive insect pest in China. Because of its rapid spread and great risks in China, understanding of FAW genetic background and pesticide resistance is urgent and essential to develop effective management strategies. Here, we assembled a chromosome-level genome of a male FAW (SFynMstLFR) and compared re-sequencing results of the populations from America, Africa, and China. Strain identification of 163 individuals collected from America, Africa and China showed that both C and R strains were found in the American populations, while only C strain was found in the Chinese and African populations. Moreover, population genomics analysis showed that populations from Africa and China have close relationship with significantly genetic differentiation from American populations. Taken together, FAWs invaded into China were most likely originated from Africa. Comparative genomics analysis displayed that the cytochrome p450 gene family is extremely expanded to 425 members in FAW, of which 283 genes are specific to FAW. Treatments of Chinese populations with twenty-three pesticides showed the variant patterns of transcriptome profiles, and several detoxification genes such as AOX, UGT and GST specially responded to the pesticides. These findings will be useful in developing effective strategies for management of FAW in China and other invaded areas.
KW - Spodoptera frugiperda
KW - chromosome-level genome
KW - population differentiation
KW - cytochrome p450
KW - pesticides
KW - LEPIDOPTERA-NOCTUIDAE
KW - HOST STRAINS
KW - DNA
KW - SUPERFAMILY
KW - EXPRESSION
KW - FORMAT
KW - PLANTS
U2 - 10.1007/s13238-020-00795-7
DO - 10.1007/s13238-020-00795-7
M3 - Journal article
C2 - 33108584
VL - 13
SP - 513
EP - 531
JO - Protein & Cell (Print)
JF - Protein & Cell (Print)
SN - 1674-800X
IS - 7
ER -
ID: 251355316