The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants

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Standard

The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants. / Li, Linzhou; Wang, Sibo; Wang, Hongli; Sahu, Sunil Kumar; Marin, Birger; Li, Haoyuan; Xu, Yan; Liang, Hongping; Li, Zhen; Cheng, Shifeng; Reder, Tanja; Çebi, Zehra; Wittek, Sebastian; Petersen, Morten; Melkonian, Barbara; Du, Hongli; Yang, Huanming; Wang, Jian; Wong, Gane Ka-Shu; Xu, Xun; Liu, Xin; Van de Peer, Yves; Melkonian, Michael; Liu, Huan.

I: Nature Ecology and Evolution, Bind 4, Nr. 9, 2020, s. 1220-1231.

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt

Harvard

Li, L, Wang, S, Wang, H, Sahu, SK, Marin, B, Li, H, Xu, Y, Liang, H, Li, Z, Cheng, S, Reder, T, Çebi, Z, Wittek, S, Petersen, M, Melkonian, B, Du, H, Yang, H, Wang, J, Wong, GK-S, Xu, X, Liu, X, Van de Peer, Y, Melkonian, M & Liu, H 2020, 'The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants', Nature Ecology and Evolution, bind 4, nr. 9, s. 1220-1231. https://doi.org/10.1038/s41559-020-1221-7

APA

Li, L., Wang, S., Wang, H., Sahu, S. K., Marin, B., Li, H., Xu, Y., Liang, H., Li, Z., Cheng, S., Reder, T., Çebi, Z., Wittek, S., Petersen, M., Melkonian, B., Du, H., Yang, H., Wang, J., Wong, G. K-S., ... Liu, H. (2020). The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants. Nature Ecology and Evolution, 4(9), 1220-1231. https://doi.org/10.1038/s41559-020-1221-7

Vancouver

Li L, Wang S, Wang H, Sahu SK, Marin B, Li H o.a. The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants. Nature Ecology and Evolution. 2020;4(9):1220-1231. https://doi.org/10.1038/s41559-020-1221-7

Author

Li, Linzhou ; Wang, Sibo ; Wang, Hongli ; Sahu, Sunil Kumar ; Marin, Birger ; Li, Haoyuan ; Xu, Yan ; Liang, Hongping ; Li, Zhen ; Cheng, Shifeng ; Reder, Tanja ; Çebi, Zehra ; Wittek, Sebastian ; Petersen, Morten ; Melkonian, Barbara ; Du, Hongli ; Yang, Huanming ; Wang, Jian ; Wong, Gane Ka-Shu ; Xu, Xun ; Liu, Xin ; Van de Peer, Yves ; Melkonian, Michael ; Liu, Huan. / The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants. I: Nature Ecology and Evolution. 2020 ; Bind 4, Nr. 9. s. 1220-1231.

Bibtex

@article{63bd527556b346d7ab6294f76eece51e,
title = "The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants",
abstract = "Genome analysis of the pico-eukaryotic marine green alga Prasinoderma coloniale CCMP 1413 unveils the existence of a novel phylum within green plants (Viridiplantae), the Prasinodermophyta, which diverged before the split of Chlorophyta and Streptophyta. Structural features of the genome and gene family comparisons revealed an intermediate position of the P. coloniale genome (25.3 Mb) between the extremely compact, small genomes of picoplanktonic Mamiellophyceae (Chlorophyta) and the larger, more complex genomes of early-diverging streptophyte algae. Reconstruction of the minimal core genome of Viridiplantae allowed identification of an ancestral toolkit of transcription factors and flagellar proteins. Adaptations of P. coloniale to its deep-water, oligotrophic environment involved expansion of light-harvesting proteins, reduction of early light-induced proteins, evolution of a distinct type of C4 photosynthesis and carbon-concentrating mechanism, synthesis of the metal-complexing metabolite picolinic acid, and vitamin B1, B7 and B12 auxotrophy. The P. coloniale genome provides first insights into the dawn of green plant evolution.",
author = "Linzhou Li and Sibo Wang and Hongli Wang and Sahu, {Sunil Kumar} and Birger Marin and Haoyuan Li and Yan Xu and Hongping Liang and Zhen Li and Shifeng Cheng and Tanja Reder and Zehra {\c C}ebi and Sebastian Wittek and Morten Petersen and Barbara Melkonian and Hongli Du and Huanming Yang and Jian Wang and Wong, {Gane Ka-Shu} and Xun Xu and Xin Liu and {Van de Peer}, Yves and Michael Melkonian and Huan Liu",
note = "Author Correction: The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants DOI: 10.1038/s41559-020-1268-5",
year = "2020",
doi = "10.1038/s41559-020-1221-7",
language = "English",
volume = "4",
pages = "1220--1231",
journal = "Nature Ecology & Evolution",
issn = "2397-334X",
publisher = "nature publishing group",
number = "9",

}

RIS

TY - JOUR

T1 - The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants

AU - Li, Linzhou

AU - Wang, Sibo

AU - Wang, Hongli

AU - Sahu, Sunil Kumar

AU - Marin, Birger

AU - Li, Haoyuan

AU - Xu, Yan

AU - Liang, Hongping

AU - Li, Zhen

AU - Cheng, Shifeng

AU - Reder, Tanja

AU - Çebi, Zehra

AU - Wittek, Sebastian

AU - Petersen, Morten

AU - Melkonian, Barbara

AU - Du, Hongli

AU - Yang, Huanming

AU - Wang, Jian

AU - Wong, Gane Ka-Shu

AU - Xu, Xun

AU - Liu, Xin

AU - Van de Peer, Yves

AU - Melkonian, Michael

AU - Liu, Huan

N1 - Author Correction: The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants DOI: 10.1038/s41559-020-1268-5

PY - 2020

Y1 - 2020

N2 - Genome analysis of the pico-eukaryotic marine green alga Prasinoderma coloniale CCMP 1413 unveils the existence of a novel phylum within green plants (Viridiplantae), the Prasinodermophyta, which diverged before the split of Chlorophyta and Streptophyta. Structural features of the genome and gene family comparisons revealed an intermediate position of the P. coloniale genome (25.3 Mb) between the extremely compact, small genomes of picoplanktonic Mamiellophyceae (Chlorophyta) and the larger, more complex genomes of early-diverging streptophyte algae. Reconstruction of the minimal core genome of Viridiplantae allowed identification of an ancestral toolkit of transcription factors and flagellar proteins. Adaptations of P. coloniale to its deep-water, oligotrophic environment involved expansion of light-harvesting proteins, reduction of early light-induced proteins, evolution of a distinct type of C4 photosynthesis and carbon-concentrating mechanism, synthesis of the metal-complexing metabolite picolinic acid, and vitamin B1, B7 and B12 auxotrophy. The P. coloniale genome provides first insights into the dawn of green plant evolution.

AB - Genome analysis of the pico-eukaryotic marine green alga Prasinoderma coloniale CCMP 1413 unveils the existence of a novel phylum within green plants (Viridiplantae), the Prasinodermophyta, which diverged before the split of Chlorophyta and Streptophyta. Structural features of the genome and gene family comparisons revealed an intermediate position of the P. coloniale genome (25.3 Mb) between the extremely compact, small genomes of picoplanktonic Mamiellophyceae (Chlorophyta) and the larger, more complex genomes of early-diverging streptophyte algae. Reconstruction of the minimal core genome of Viridiplantae allowed identification of an ancestral toolkit of transcription factors and flagellar proteins. Adaptations of P. coloniale to its deep-water, oligotrophic environment involved expansion of light-harvesting proteins, reduction of early light-induced proteins, evolution of a distinct type of C4 photosynthesis and carbon-concentrating mechanism, synthesis of the metal-complexing metabolite picolinic acid, and vitamin B1, B7 and B12 auxotrophy. The P. coloniale genome provides first insights into the dawn of green plant evolution.

UR - https://doi.org/10.1038/s41559-020-1268-5

U2 - 10.1038/s41559-020-1221-7

DO - 10.1038/s41559-020-1221-7

M3 - Journal article

C2 - 32572216

AN - SCOPUS:85086702397

VL - 4

SP - 1220

EP - 1231

JO - Nature Ecology & Evolution

JF - Nature Ecology & Evolution

SN - 2397-334X

IS - 9

ER -

ID: 244278791