Bioinformatik projekter

Oversigten er ordnet alfabetisk efter projekttitel.
Klik på titlen for at læse mere om projektet.

Bacteria on marine particles: Molecular identification of important nitrogen fixers

Vejleder: Lasse Riemann

Are eucalypt leaf volatiles inducible?

Vejleder: Riikka Rinnan (BIO), Elizabeth Neilson (PLEN)

Bacteria fixing N2 in the sea – a combination of microbiology, molecular biology and marine biology

Vejleder: Lasse Riemann

Bacterial composition, diversity and function in marine waters - molecular microbiology projects

Vejleder: Lasse Riemann

Bacterial cooperation in multispecies biofilms associated to food production devices

Vejleder: Søren J. Sørensen og Mette Burmølle

Bacterial growth and composition in marine waters: Importance of vitamin B1

Vejleder: Lasse Riemann and Meriel Bittner

Biogenic volatile organic compounds - release from plants, microbes and ecosystems

Vejleder: Riikka Rinnan and others depending on the topic

Biogenic volatile release from decomposing plant leaves across ecosystems

Vejleder: Riikka Rinnan and other relevant persons

Bioinformatic analyses of sulfide detoxification by all organisms

Vejleder: Niels-Ulrik Frigaard

CENPERM - Center for Permafrost

Vejleder: Anders Michelsen, Riikka Rinnan, Anders Prieme

Chemical manipulation of ants by metalmark butterflies

Vejleder: David Nash

Comparing morphology and genetic diversity of Alcon Blue butterflies over >50 years

Vejleder: David Nash

Comparing the brains of socially parasitic ants and their hosts

Vejleder: David Nash and Manuel Nagel

Cooperation in multispecies biofilm formation

Vejleder: Mette Burmølle og Søren Sørensen

CRISPRs on Plasmids: Fight Fire with Fire

Vejleder: Jonas Stenløkke Madsen, Joseph Nesme and Rafael Pinilla

Developmental changes of individual variation on gene expression

Vejleder: Guojie Zhang

Differential gene expression in multispecies biofilm

Vejleder: Mette Burmølle

Freshwater fauna of the Crozet Subantarctic Island - biodiversity, connectivity and evolution

Vejleder: Katrine Worsaae and Peter Rask Møller

Horizontal gene transfer - Spread of antibiotic resistance

Vejleder: Søren J. Sørensen

Interactions between beneficial plant microbes and foliar fungal diseases

Vejleder: Rasmus Kjøller, Tao Li and Riikka Rinnan

Investigating microbial diversity by analysis of distant variable regions of 16S rRNA using MiSeq paired end sequencing

Vejleder: Søren J. Sørensen

Mapping of genetic diversity in intestinal parasites using DNA sequence clustering and querying of ILLUMINA data and an in-house software (BION)

Vejleder: Søren Sørensen og Rune Stensvold

Marine viruses at hadal depths in deep sea trenches

Vejleder: Mathias Middelboe, Sachia Jo Traving

Microbial abundance and diversity in dust samples collected from homes of kids with asthma

Vejleder: Søren Sørensen

Microbial communities in extreme environments

Vejleder: Niels-Ulrik Frigaard

Microbial production and uptake of volatile organic compounds

Vejleder: Riikka Rinnan (BIO) and Christian Albers (GEUS)

Name a new parasite!

Vejleder: Rune Stensvold, Laboratory of Parasitology, Statens Serum Institut and Søren Sørensen, Section of Microbiology, UCPH

Nitrogen cycling in arctic ecosystems: at present and in future

Vejleder: Riikka Rinnan, Jing Tang

Projects in Genome Evolution

Vejleder: Birgitte Regenberg and/or Guojie Zhang

Release of climate gases from freshwaters and wetlands

Vejleder: Kaj Sand-Jensen, Kenneth Thorø Martinsen, Jonas Stage Sø, Theis Kragh, Lars Baastrup-Spohr

Social interactions and population structure

Vejleder: Søren J. Sørensen og Mette Burmølle

The arbuscular mycorrhizal fungi of Plantago major and their role in regulating plant defences

Vejleder: Christopher James Barnes and Rasmus Kjøller

The core bacterial genome of fungus-farming termite microbiomes

Vejleder: Michael Poulsen and PhD students Veronica Sinotte and Robert Murphy

The interconnection between biofilm formation and horizontal gene transfer

Vejleder: Søren J. Sørensen, Mette Burmølle og Jonas Stenløkke Madsen

Unravel and map eukaryotic diversity within the human gut

Vejleder: Søren J. Sørensen og Rune Stensvold (SSI)

Virus-driven reprogramming of bacterial traits

Vejleder: Mathias Middelboe