Bioinformatik projekter

Oversigten er ordnet alfabetisk efter projekttitel.
Klik på titlen for at læse mere om projektet.

Bacteria on marine particles: Molecular identification of important nitrogen fixers
Vejleder: Lasse Riemann

Are eucalypt leaf volatiles inducible?
Vejleder: Riikka Rinnan (BIO), Elizabeth Neilson (PLEN)

Bacterial composition, diversity and function in marine waters - molecular microbiology projects
Vejleder: Lasse Riemann

Bacterial cooperation in multispecies biofilms associated to food production devices
Vejleder: Søren J. Sørensen og Mette Burmølle

Biogenic volatile organic compounds - release from plants, microbes and ecosystems
Vejleder: Riikka Rinnan and others depending on the topic

Biogenic volatile release from decomposing plant leaves across ecosystems
Vejleder: Riikka Rinnan and other relevant persons

CENPERM - Center for Permafrost
Vejleder: Anders Michelsen, Riikka Rinnan, Anders Prieme

Characterization of bacterial mercury resistance in High Arctic bacteria
Vejleder: Niels Kroer (nk@bio.ku.dk) and Søren J. Sørensen (sjs@bio.ku.dk)

Comparing morphology and genetic diversity of Alcon Blue butterflies over >50 years
Vejleder: David Nash

Cooperation in multispecies biofilm formation
Vejleder: Mette Burmølle og Søren Sørensen

CRISPRs on Plasmids: Fight Fire with Fire
Vejleder: Jonas Stenløkke Madsen, Joseph Nesme and Rafael Pinilla

Developmental changes of individual variation on gene expression
Vejleder: Guojie Zhang

Differential gene expression in multispecies biofilm
Vejleder: Mette Burmølle

Genetic characterization of bacterial human virulence genes in non-host environmental bacteria
Vejleder: Niels Kroer (nk@bio.ku.dk) and Søren J. Sørensen (sjs@bio.ku.dk)

Horizontal gene transfer - Spread of antibiotic resistance
Vejleder: Søren J. Sørensen

Interactions between beneficial plant microbes and foliar fungal diseases
Vejleder: Rasmus Kjøller, Tao Li and Riikka Rinnan

Investigating microbial diversity by analysis of distant variable regions of 16S rRNA using MiSeq paired end sequencing
Vejleder: Søren J. Sørensen

Is Bacillus a coevolved bacterium serving as a defensive symbiont in fungus-growing termites?
Vejleder: Michael Thomas-Poulsen

Microbial abundance and diversity in dust samples collected from homes of kids with asthma
Vejleder: Søren Sørensen

Microbial communities in extreme environments
Vejleder: Niels-Ulrik Frigaard

Microbial production and uptake of volatile organic compounds
Vejleder: Riikka Rinnan (BIO) and Christian Albers (GEUS)

Name a new parasite!
Vejleder: Rune Stensvold, Laboratory of Parasitology, Statens Serum Institut and Søren Sørensen, Section of Microbiology, UCPH

Nitrogen cycling in arctic ecosystems: at present and in future
Vejleder: Riikka Rinnan, Jing Tang

Sequence analyses reveal sulfide detoxification by organisms across the entire Tree of Life
Vejleder: Niels-Ulrik Frigaard

Social interactions and population structure
Vejleder: Søren J. Sørensen og Mette Burmølle

The arbuscular mycorrhizal fungi of Plantago major and their role in regulating plant defences
Vejleder: Christopher James Barnes and Rasmus Kjøller

The contributions of the fungal symbiont to defence against pathogens in fungus-growing termites
Vejleder: Michael Thomas-Poulsen

The core bacterial genome of fungus-farming termite microbiomes
Vejleder: Michael Poulsen and PhD students Veronica Sinotte and Robert Murphy

The interconnection between biofilm formation and horizontal gene transfer
Vejleder: Søren J. Sørensen, Mette Burmølle og Jonas Stenløkke Madsen

Unravel and map eukaryotic diversity within the human gut
Vejleder: Søren Johannes Sørensen og Rune Stensvold (SSI)

Virus-driven reprogramming of bacterial traits
Vejleder: Mathias Middelboe