Xu Peng
Professor
Functional Genomics
Ole Maaløes Vej 5
2200 København N.
- 2023
- Published
A clade of RHH proteins ubiquitous in Sulfolobales and their viruses regulates cell cycle progression
Li, X., Lozano-Madueno, C., Martinez Alvarez, Laura & Peng, Xu, 2023, In: Nucleic acids symposium series. 51, 4, 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Four additional natural 7-deazaguanine derivatives in phages and how to make them
Cui, L., Balamkundu, S., Liu, C. F., Ye, H., Hourihan, J., Rausch, A., Hauß, C., Nilsson, E., Hoetzinger, M., Holmfeldt, K., Zhang, W., Martinez-Alvarez, L., Peng, X., Tremblay, D., Moinau, S., Solonenko, N., Sullivan, M. B., Lee, Y. J., Mulholland, A., Weigele, P. R. & 3 others, , 2023, In: Nucleic Acids Research. 51, 17, p. 9214-9226 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Molecular basis for inhibition of type III-B CRISPR-Cas by an archaeal viral anti-CRISPR protein
Lin, Jinzhong, Alfastsen, L., Bhoobalan, Yuvaraj & Peng, Xu, 2023, In: Cell Host and Microbe. 31, 11, p. 1837-1849.e5 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Replication Protein Rep Provides Selective Advantage to Viruses in the Presence of CRISPR-Cas Immunity
Zhang, W., Bhoobalan-Chitty, Y., Zhai, Xichuan, Hui, Y., Hansen, Lars Hestbjerg, Deng, Ling & Peng, Xu, 2023, In: CRISPR Journal. 6, 1, p. 32-42Research output: Contribution to journal › Journal article › Research › peer-review
- 2022
- Published
A Comparative Analysis of Weizmannia coagulans Genomes Unravels the Genetic Potential for Biotechnological Applications
Aulitto, M., Martinez Alvarez, Laura, Fiorentino, G., Limauro, D., Peng, Xu & Contursi, P., 2022, In: International Journal of Molecular Sciences . 23, 6, 23 p., 3135.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative proteomics and secretomics revealed virulence, and coresistance-related factors in non O1/O139 Vibrio cholerae recovered from 16 species of consumable aquatic animals
Shan, X., Fu, J., Li, X., Peng, Xu & Chen, L., 2022, In: Journal of Proteomics. 251, 15 p., 104408.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DNA Motifs and an Accessory CRISPR Factor Determine Cas1 Binding and Integration Activity in Sulfolobus islandicus
Liu, T., Xu, Y., Wang, X., Ye, Q., Liu, Z., Zhang, Z., Liu, J., Yang, Y., Peng, Xu & Peng, N., 2022, In: International Journal of Molecular Sciences . 23, 17, 15 p., 10178.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Diverse Aquatic Animal Matrices Play a Key Role in Survival and Potential Virulence of Non-O1/O139 Vibrio cholerae Isolates
Yan, L., Jin, Y., Zhang, B., Xu, Y., Peng, Xu, Qin, S. & Chen, L., 2022, In: Frontiers in Microbiology. 13, 21 p., 896767.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomics, Transcriptomics, and Proteomics of SSV1 and Related Fusellovirus: A Minireview
Aulitto, M., Martinez Alvarez, Laura, Fusco, S., She, Q., Bartolucci, S., Peng, Xu & Contursi, P., 2022, In: Viruses. 14, 10, 18 p., 2082.Research output: Contribution to journal › Review › Research › peer-review
- Published
Survival and Genome Diversity of Vibrio parahaemolyticus Isolated from Edible Aquatic Animals
Xu, D., Peng, Xu, Xie, L. & Chen, L., 2022, In: Diversity. 14, 5, 23 p., 350.Research output: Contribution to journal › Journal article › Research › peer-review
- 2021
- Published
Bacterial Viruses Subcommittee and Archaeal Viruses Subcommittee of the ICTV: update of taxonomy changes in 2021
Krupovic, M., Turner, D., Morozova, V., Dyall-Smith, M., Oksanen, H. M., Edwards, R., Dutilh, B. E., Lehman, S. M., Reyes, A., Baquero, D. P., Sullivan, M. B., Uchiyama, J., Nakavuma, J., Barylski, J., Young, M. J., Du, S., Alfenas-Zerbini, P., Kushkina, A., Kropinski, A. M., Kurtböke, I. & 29 others, , 2021, In: Archives of Virology. 166, 11, p. 3239-3244 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genome editing in archaeal viruses and endogenous viral protein purification
Alfastsen, L., Peng, Xu & Bhoobalan, Yuvaraj, 2021, In: STAR Protocols. 2, 4, 27 p., 100791.Research output: Contribution to journal › Journal article › Research › peer-review
- 2020
- Published
Anti-CRISPR Proteins in Archaea
Peng, Xu, Mayo-Muñoz, D., Bhoobalan, Yuvaraj & Martinez Alvarez, Laura, 2020, In: Trends in Microbiology. 28, 11, p. 913-921 9 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Archaeal Viruses and Their Interactions with CRISPR-Cas Systems
Garrett, Roger Antony, Shah, S. A., Martinez Alvarez, Laura & Peng, Xu, 2020, Biocommunication of Phages. 1 ed. Springer, p. 199-220 22 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Comparative Proteomics and Secretomics Revealed Virulence and Antibiotic Resistance-Associated Factors in Vibrio parahaemolyticus Recovered From Commonly Consumed Aquatic Products
Zhu, Z., Yang, L., Yu, P., Wang, Y., Peng, Xu & Chen, L., 2020, In: Frontiers in Microbiology. 11, 31 p., 1453.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DNA targeting by subtype I-D CRISPR-Cas shows type I and type III features
Lin, Jinzhong, Fuglsang, Anders, Kjeldsen, A. L., Sun, K., Bhoobalan, Yuvaraj & Peng, Xu, 2020, In: Nucleic Acids Research. 48, 18, p. 10470-10478 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Discovery and Characterization of a Novel Thermostable β-Amino Acid Transaminase from a Meiothermus Strain Isolated in an Icelandic Hot Spring
Ferrandi, E. E., Bassanini, I., Sechi, B., Vanoni, M., Tessaro, D., Gudbergsdóttir, S. R., Riva, S., Peng, Xu & Monti, D., 2020, In: Biotechnology Journal. 15, 11, 9 p., 2000125.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Prophage-Related Gene VpaChn25_0724 Contributes to Cell Membrane Integrity and Growth of Vibrio parahaemolyticus CHN25
Yang, L., Wang, Y., Yu, P., Ren, S., Zhu, Z., Jin, Y., Yan, J., Peng, Xu & Chen, L., 2020, In: Frontiers in Cellular and Infection Microbiology. 10, 18 p., 595709.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Structural basis for inhibition of an archaeal CRISPR–Cas type I-D large subunit by an anti-CRISPR protein
Manav, M. C., Van, L. B., Lin, Jinzhong, Fuglsang, Anders, Peng, Xu & Brodersen, D. E., 2020, In: Nature Communications. 11, 10 p., 5993.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Virulence, Resistance, and Genomic Fingerprint Traits of Vibrio cholerae Isolated from 12 Species of Aquatic Products in Shanghai, China
Fu, H., Yu, P., Liang, W., Kan, B., Peng, Xu & Chen, L., 2020, In: Microbial Drug Resistance. 26, 12, p. 1526-1539 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2019
- Published
Comparative genomics for non-O1/O139 Vibrio cholerae isolates recovered from the Yangtze River Estuary versus V. cholerae representative isolates from serogroup O1
Gong, L., Yu, P., Zheng, H., Gu, W., He, W., Tang, Y., Wang, Y., Dong, Y., Peng, Xu, She, Q., Xie, L. & Chen, L., 2019, In: Molecular Genetics and Genomics. 294, 2, p. 417-430Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Inhibition of Type III CRISPR-Cas Immunity by an Archaeal Virus-Encoded Anti-CRISPR Protein
Bhoobalan, Yuvaraj, Johansen, T. B., Di Cianni, N. & Peng, Xu, 2019, In: Cell. 179, 2, p. 448-458, e1-e11Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stable maintenance of the rudivirus SIRV3 in a carrier state in Sulfolobus islandicus despite activation of the CRISPR-Cas immune response by a second virus SMV1
Papathanasiou, P., Erdmann, S., Leon-Sobrino, C., Sharma, K., Urlaub, H., Garrett, Roger Antony & Peng, Xu, 2019, In: RNA Biology. 16, 4, p. 557-565Research output: Contribution to journal › Journal article › Research › peer-review
- 2018
- Published
Erratum: Formation of a viral replication focus in Sulfolobus cells infected by the rudivirus Sulfolobus islandicus rod-shaped virus 2 [Journal of Virology, 91, 13, (2017), (e00486-17)] DOI:10.1128/JVI.00486-17
Martinez Alvarez, Laura, Deng, Ling & Peng, Xu, 1 Apr 2018, In: Journal of Virology. 92, 7, e01991-17.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
A Unified Resource for Tracking Anti-CRISPR Names
Bondy-Denomy, J., Davidson, A. R., Doudna, J. A., Fineran, P. C., Maxwell, K. L., Moineau, S., Peng, Xu, Sontheimer, E. J. & Wiedenheft, B., 2018, In: CRISPR Journal. 1, 5, p. 304-305Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Anti-CRISPR proteins encoded by archaeal lytic viruses inhibit subtype I-D immunity
He, F., Bhoobalan, Yuvaraj, Van, L. B., Kjeldsen, A. L., Dedola, M., Makarova, K. S., Koonin, E. V., Brodersen, D. E. & Peng, Xu, 2018, In: Nature Microbiology. 3, 4, p. 461-469 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Anti-CRISPR-Based and CRISPR-Based Genome Editing of Sulfolobus islandicus Rod-Shaped Virus 2
Mayo-Muñoz, D., He, F., Jørgensen, J. B., Madsen, P. K., Bhoobalan, Yuvaraj & Peng, Xu, 2018, In: Viruses. 10, 12, p. 1-17 695.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Discovering novel hydrolases from hot environments
Wohlgemuth, R., Littlechild, J., Monti, D., Schnorr, K., van Rossum, T., Siebers, B., Menzel, P., Kublanov, I. V., Rike, A. G., Skretas, G., Szabo, Z., Peng, Xu & Young, M. J., 2018, In: Biotechnology Advances. 36, 8, p. 2077-2100Research output: Contribution to journal › Journal article › Research › peer-review
- 2017
- Published
Sugar metabolism of the first thermophilic Planctomycete Thermogutta terrifontis: comparative genomic and transcriptomic approaches
Elcheninov, A. G., Menzel, P., Gudbergsdottir, S. R., Slesarev, A. I., Kadnikov, V. V., Krogh, Anders, Bonch-Osmolovskaya, E. A., Peng, Xu & Kublanov, I. V., 2 Nov 2017, In: Frontiers in Microbiology. 8, 11 p., 2140.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
SMV1, an extremely stable thermophilic virus platform for nanoparticle trafficking in the mammalian GI tract
Uldahl, K. B., Walk, S. T., Olshefsky, S. C., Young, M. J. & Peng, Xu, Nov 2017, In: Journal of Applied Microbiology. 123, 5, p. 1286-1297 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interaction of extremophilic archaeal viruses with human and mouse complement system and viral biodistribution in mice
Wu, L., Uldahl, K. B., Chen, F., Benasutti, H., Logvinski, D., Vu, V., Banda, N. K., Peng, Xu, Simberg, D. & Moghimi, S. M., Oct 2017, In: Molecular Immunology. 90, p. 273-279 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Formation of a viral replication focus in Sulfolobus cells infected by the rudivirus Sulfolobus islandicus rod-shaped virus 2
Martinez Alvarez, Laura, Deng, Ling & Peng, Xu, Jul 2017, In: Journal of Virology. 91, 13, 12 p., e00486-17.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomic and transcriptomic analyses reveal distinct biological functions for cold shock proteins (VpaCspA and VpaCspD) in Vibrio parahaemolyticus CHN25 during low-temperature survival
Zhu, C., Sun, B., Liu, T., Zheng, H., Gu, W., He, W., Sun, F., Wang, Y., Yang, M., Bei, W., Peng, Xu, She, Q., Xie, L. & Chen, L., 5 Jun 2017, In: BMC Genomics. 18, 19 p., 436.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel thermostable amine transferases from hot spring metagenomes
Ferrandi, E. E., Previdi, A., Bassanini, I., Riva, S., Peng, Xu & Monti, D., Jun 2017, In: Applied Microbiology and Biotechnology. 101, 12, p. 4963-4979 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CRISPR-Cas type I-A Cascade complex couples viral infection surveillance to host transcriptional regulation in the dependence of Csa3b
He, F., Vestergaard, G. A., Peng, W., She, Q. & Peng, Xu, 2017, In: Nucleic Acids Research. 45, 4, p. 1902-1913 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2016
- Published
Life cycle characterization of Sulfolobus monocaudavirus 1, an extremophilic spindle-shaped virus with extracellular tail development
Uldahl, K. B., Jensen, S. B., Bhoobalan, Yuvaraj, Martinez Alvarez, Laura, Papathanasiou, P. & Peng, Xu, Jun 2016, In: Journal of Virology. 90, 12, p. 5693-5699 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Discovery and characterization of a thermostable and highly halotolerant GH5 cellulase from an Icelandic hot spring isolate
Zarafeta, D., Kissas, D., Sayer, C., Islin, S. R., Ladoukakis, E., Isupov, M. N., Chatziioannou, A., Peng, Xu, Littlechild, J. A., Skretas, G. & Kolisis, F. N., 2016, In: P L o S One. 11, 1, 18 p., e0146454.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
EstDZ3: a new esterolytic enzyme exhibiting remarkable thermostability
Zarafeta, D., Szabo, Z., Moschidi, D., Phan, Safir Hien, Chrysina, E. D., Peng, Xu, Ingham, C. J., Kolisis, F. N. & Skretas, G., 2016, In: Frontiers in Microbiology. 7, 14 p., 1779.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Isolation and characterization of the first Xylanolytic hyperthermophilic euryarchaeon Thermococcus sp strain 2319x1 and its unusual multidomain glycosidase
Gavrilov, S. N., Stracke, C., Jensen, K., Menzel, P., Kallnik, V., Slesarev, A., Sokolova, T., Zayulina, K., Bräsen, C., Bonch-Osmolovskaya, E. A., Peng, Xu, Kublanov, I. V. & Siebers, B., 2016, In: Frontiers in Microbiology. 7, 17 p., 552.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multiple consecutive initiation of replication producing novel brush-like intermediates at the termini of linear viral dsDNA genomes with hairpin ends.
Martinez Alvarez, Laura, Bell, S. D. & Peng, Xu, 2016, In: Nucleic Acids Research. 44, 18, p. 8799-8809 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel viral genomes identified from six metagenomes reveal wide distribution of archaeal viruses and high viral diversity in terrestrial hot springs
Islin, S. R., Menzel, P., Krogh, Anders, Young, M. & Peng, Xu, 2016, In: Environmental Microbiology. 18, 3, p. 863-874 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Recognition of extremophilic archaeal viruses by eukaryotic cells: a promising nanoplatform from the third domain of life
Uldahl, K. B., Wu, L., Hall, A., Papathanasiou, P., Peng, Xu & Moghimi, S. M., 2016, In: Scientific Reports. 6, 37966.Research output: Contribution to journal › Journal article › Research › peer-review
- 2015
- Published
CRISPR-Cas adaptive immune systems of the sulfolobales: unravelling their complexity and diversity
Garrett, Roger Antony, Shah, S. A., Erdmann, S., Guannan, L., Mousaei, M., León Sobrino, C., Peng, W., Islin, S. R., Deng, Ling, Vestergaard, G., Peng, Xu & She, Q., 2015, In: Life. 5, 1, p. 783-817 35 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative metagenomics of eight geographically remote terrestrial hot springs
Menzel, P., Islin, S. R., Rike, A. G., Lin, L., Zhang, Q., Contursi, P., Moracci, M., Kristjansson, J. K., Bolduc, B., Gavrilov, S., Ravin, N., Mardanov, A., Bonch-Osmolovskaya, E., Young, M., Krogh, Anders & Peng, Xu, 2015, In: Microbial Ecology. 70, 2, p. 411-424 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Discovery and characterization of thermophilic limonene-1,2-epoxide hydrolases from hot spring metagenomic libraries
Ferrandi, E. E., Sayer, C., Isupov, M. N., Annovazzi, C., Marchesi, C., Iacobone, G., Peng, Xu, Bonch-Osmolovskaya, E., Wohlgemuth, R., Littlechild, J. A. & Monti, D., 2015, In: F E B S Journal. 282, 15, p. 2879-2894 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Functional characterization of a conserved archaeal viral operon revealing single-stranded DNA binding, annealing and nuclease activities
Guo, Y., Kragelund, Birthe Brandt, White, M. F. & Peng, Xu, 2015, In: Journal of Molecular Biology. 427, 12, p. 2179-2191 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2014
- Published
First experimental evidence for the presence of a CRISPR toxin in Sulfolobus
He, F., Chen, L. & Peng, Xu, 2014, In: Journal of Molecular Biology. 426, 22, p. 3683-3688 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Insights into Vibrio parahaemolyticus CHN25 response to artificial gastric fluid stress by transcriptomic analysis
Sun, X., Liu, T., Peng, Xu & Chen, L., 2014, In: International Journal of Molecular Sciences (Online). 15, 12, p. 22539-22562 24 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metagenomic analyses reveal phylogenetic diversity of carboxypeptidase gene sequences in activated sludge of a wastewater treatment plant in Shanghai, China
Jin, H., Li, B., Peng, Xu & Chen, L., 2014, In: Annals of Microbiology. 64, 2, p. 689-697 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Unveiling cell surface and type IV secretion proteins responsible for archaeal rudivirus entry
Deng, Ling, He, F., Bhoobalan, Yuvaraj, Martinez Alvarez, Laura, Guo, Y. & Peng, Xu, 2014, In: Journal of Virology. 88, 17, p. 10264-10268 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2013
- Published
A novel interference mechanism by a type IIIB CRISPR-Cmr module in Sulfolobus
Deng, Ling, Garrett, Roger Antony, Shah, S. A., Peng, Xu & She, Q., 2013, In: Molecular Microbiology. 87, 5, p. 1088-1099 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Biology, biodiversity and application potential of thermophilic viruses
Uldahl, K. B. & Peng, Xu, 2013, Thermophilic Microbes in Environmental and Industrial Biotechnology: Biotechnology of Thermophiles. Satyanarayana, T., Littlechild, J. & Kawarabayasi, Y. (eds.). Springer, p. 271-304 34 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Genome Sequence of a Novel Archaeal Fusellovirus Assembled from the Metagenome of a Mexican Hot Spring
Servin-Garciduenas, L. E., Peng, Xu, Garrett, Roger Antony & Martinez-Romero, E., 2013, In: Genome Announcements. 1, p. 1-2 2 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genome Sequence of a Novel Archaeal Rudivirus Recovered from a Mexican Hot Spring
Servín-Garcidueñas, L., Peng, Xu, Garrett, Roger Antony & Martínez-Romero, E., 2013, In: Genome Announcements. 1, 1, p. 1-2 2 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Molecular cloning and antimicrobial activity of enterolysin A and helveticin J of bacteriolysins from metagenome of Chinese traditional fermented foods
Zhang, T., Pan, Y., Li, B., Ou, J., Zhang, J., Chen, Y., Peng, Xu & Chen, L., 2013, In: Food Control. 31, 2, p. 499-507 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel insights into gene regulation of the rudivirus SIRV2 infecting Sulfolobus cells
Okutan, E., Deng, Ling, Mirlashari, S., Uldahl, K., Halim, M., Liu, C., Garrett, Roger Antony, She, Q. & Peng, Xu, 2013, In: R N A Biology. 10, 5, p. 1-11 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2012
- Published
Archaeal viruses-novel, diverse and enigmatic
Peng, Xu, Garrett, Roger Antony & She, Q., 2012, In: Science China Life Sciences. 55, 5, p. 422-433 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ekstremernes herrer
Uldahl, K. B. & Peng, Xu, 2012, In: Aktuel Naturvidenskab. 2012, 05, p. 28-29 2 p.Research output: Contribution to journal › Journal article › Research
- Published
Modulation of CRISPR locus transcription by the repeat-binding protein Cbp1 in Sulfolobus
Deng, Ling, Kenchappa, C. S., Peng, Xu, She, Q. & Garrett, Roger Antony, 2012, In: Nucleic Acids Research. 40, 6, p. 2470-2480 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2011
- Published
A dimeric Rep protein initiates replication of a linear archaeal virus genome: implications for the Rep mechanism and viral replication
Oke, M., Kerou, M., Liu, H., Peng, Xu, Garrett, Roger Antony, Prangishvili, D., Naismith, J. H. & White, M. F., 2011, In: Journal of Virology. 85, 2, p. 925-31 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2010
- Published
Metagenomic analyses of novel viruses and plasmids from a cultured environmental sample of hyperthermophilic neutrophiles
Garrett, Roger Antony, Prangishvili, D., Shah, S. A., Reuter, M., Stetter, K. O. & Peng, Xu, 1 Nov 2010, In: Environmental Microbiology. 12, 11, p. 2918-30 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Scottish Structural Proteomics Facility: targets, methods and outputs
Oke, M., Carter, L. G., Johnson, K. A., Liu, H., McMahon, S. A., Yan, X., Kerou, M., Weikart, N. D., Kadi, N., Sheikh, M. A., Schmelz, S., Dorward, M., Zawadzki, M., Cozens, C., Falconer, H., Powers, H., Overton, I. M., van Niekerk, C. A. J., Peng, X., Patel, P. & 11 others, , 1 Jun 2010, In: Journal of Structural and Functional Genomics. 11, 2, p. 167-80 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Familial relationships in hyperthermo- and acidophilic archaeal viruses
Happonen, L. J., Redder, P., Peng, Xu, Reigstad, L. J., Prangishvili, D. & Butcher, S. J., 1 May 2010, In: Journal of Virology. 84, 9, p. 4747-54 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2009
- Published
Four newly isolated fuselloviruses from extreme geothermal environments reveal unusual morphologies and a possible interviral recombination mechanism
Redder, P., Peng, Xu, Brügger, K., Shah, S. A., Roesch, F., Greve, B., She, Q., Schleper, C., Forterre, P., Garrett, Roger Antony & Prangishvili, D., 2009, In: Environmental Microbiology. 11, 11, p. 2849-62 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel archaeal plasmid pAH1 and its interactions with the lipothrixvirus AFV1
Basta, T., Smyth, J., Forterre, P., Prangishvili, D. & Peng, Xu, 2009, In: Molecular Microbiology. 71, 1, p. 23-34 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2008
- Published
Evidence for the horizontal transfer of an integrase gene from a fusellovirus to a pRN-like plasmid within a single strain of Sulfolobus and the implications for plasmid survival
Peng, Xu, 2008, In: Microbiology. 154, Pt 2, p. 383-91 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Structure of the acidianus filamentous virus 3 and comparative genomics of related archaeal lipothrixviruses
Vestergaard, G. A., Aramayo, R., Basta, T., Häring, M., Peng, Xu, Brügger, K., Chen, L., Rachel, R., Boisset, N., Garrett, Roger Antony & Prangishvili, D., 2008, In: Journal of Virology. 82, 1, p. 371-381 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Viruses in acidic geothermal environments of the Kamchatka Peninsula
Bize, A., Peng, Xu, Prokofeva, M., Maclellan, K., Lucas, S., Forterre, P., Garrett, Roger Antony, Bonch-Osmolovskaya, E. A. & Prangishvili, D., 2008, In: Research in Microbiology. 159, 5, p. 358-66 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2007
- Published
Genome of the Acidianus bottle-shaped virus and insights into the replication and packaging mechanisms
Peng, Xu, Basta, T., Häring, M., Garrett, Roger Antony & Prangishvili, D., 2007, In: Virology. 364, 1, p. 237-43 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2006
- Published
How to induce non-polarized cells of hepatic origin to express typical hepatocyte polarity: generation of new highly polarized cell models with developed and functional bile canaliculi
Peng, Xu & Grosse B, Le Tiec B, Nicolas V, Delagebeaudeuf C, Bedda T, Decaens C, Cassio D, G. B. L. T. B. N. V. D. C. B. T. D. C. C. D., 2006, In: Cell and Tissue Research.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sulfolobus genomes: mechanisms of rearrangement and change
Brügger, K., Peng, Xu & Garrett, Roger Antony, 2006, Archaea: Evolution, physiology and Molecular Biolog.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- 2005
- Published
A novel rudivirus, ARV1, of the hyperthermophilic archaeal genus Acidianus
Vestergaard, G. A., Häring, M., Peng, Xu, Rachel, R., Garrett, Roger Antony & Prangishvili, D., 2005, In: Virology. 336, 1, p. 83-92 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Viral Diversity in Hot Springs of Pozzuoli, Italy, and Characterization of a Unique Archaeal Virus, Acidianus Bottle-Shaped Virus, from a New Family, the Ampullaviridae
Häring, M., Rachel, R., Peng, Xu, Garrett, Roger Antony & Prangishvili, D., 2005, In: Journal of Virology. 79, 15, p. 9904 - 9911Research output: Contribution to journal › Journal article › Research › peer-review
- 2004
- Published
Morphology and genome organisation of the virus PSV of the hyperthermophilic archaeal genera Pyrobaculum and Thermoproteus: A novel virus family, the Globuloviridae
Häring , M., Peng, Xu & Brugger K., Rachel R., Stetter K.O., Garrett R.A.,Prangishvili D., B. K. ,. R. R. ,. S. K. O. ,. G. R. A. ,. D., 2004, In: Virology.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multiple variants of the archaeal dna rudivirus SIRV1 in a single host and a novel mechanism of genomic variation
Peng, Xu, Kessler, A., Phan, H., Garrett, Roger Antony & Prangishvili, D., 2004, In: Molecular Microbiology. Vol. 54 (2), p. 366-375Research output: Contribution to journal › Journal article › Research › peer-review
- 2003
- Published
AFV1 a novel virus infecting hyperthermophilic archaea of the genus Acidianus
Bettstetter, M., Peng, Xu, Garrett, Roger Antony & Prangishvili, D., 2003, In: Virology. 315, p. 69-79Research output: Contribution to journal › Journal article › Research › peer-review
- Published
AFV1, a novel virus infecting hyperthermophilic archaea of the genus Acidianus.
Bettstetter, M., Peng, Xu & Garrett RA, Prangishvili D., G. R. P. D., 2003, In: Virology.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genus-specific protein binding to the large clusters of DNA repeats (short regularly spaced repeats) present in Sulfolobus genomes
Peng, Xu, Brügger, K., Shen, B., Chen, L., She, Q. & Garrett, Roger Antony, 2003, In: Journal of Bacteriology. 185, 8, p. 2410-7 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2001
- Published
Gene capture in archaeal chromosomes.
She, Q., Peng, Xu, Zillig, W. & Garrett, Roger Antony, 2001, In: Nature. 409, p. 478Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sequences and replication of the archaeal rediviruses SIRV1 and SIRV2 relationships to the archaeal lipothrixvirus SIFV and some eukaryal viruses
Peng, Xu, Blum, H., She, Q., Mallok, H., Brügger, K., Garrett, R. A., Zillig, W. & Prangishvili, D., 2001, In: Virology. 291, p. 226-234Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The complete genome of the crenarchaeon Sulfolobus solfataricus P2.
She, Q., Singh, R. K., Confalonieri, F., Zivanovic, Y., Allard, G., Awayez, M. J., Chan-Weiher, CC-Y., Clausen, I. G., Curtis, B. A., De Moors, A., Erauso, G., Fletcher, C., Gordon, P. M., Heikamp-de Jong, I., Jeffries, A. C., Kozera, C. J., Medina, N., Peng, X., Phan, T. N. H., Redder, P. B. & 11 others, , 2001, In: Proceedings of the National Academy of Science of the United States of America. 98, p. 7835-7840Research output: Contribution to journal › Journal article › Research › peer-review
- 2000
- Published
Evolution of the family of pRN plasmids and their integrase-mediated insertion into the chromosome of the crenarchaeon Sulfolobus solfataricus
Peng, Xu, Holz, I., Zillig, W., Garrett, Roger Antony & She, Q., 2000, In: Journal of Molecular Biology. 303, p. 449-454Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Gene content and organization of a 281-kbp contig from the genome of the extremely thermophilic archaeon, Sulfolobus solfataricus P2
Charlebois, R. L., Singh, R. K., Chan-Weiher, CC-Y., Allard, G., Chow, C., Confalonieri, F., Curtis, B., Duguet, M., Erauso, G., Faguy, D., Gaasterland, T., Garrett, R. A., Gordon, P., Jeffries, A. C., Kozera, C., Kushwaha, N., Lafleur, E., Medina, N., Peng, X., Penny, S. L. & 8 others, , 2000, In: Genome. 43, p. 116-136Research output: Contribution to journal › Journal article › Research › peer-review
- 1999
- Published
Growth factors and gene expression in cultured hepatocytes
Grunnet, N., Peng, Xu & Tygstrup, N., 1999, In: Jounal of Hepatology. 30, p. 117-122Research output: Contribution to journal › Journal article › Research › peer-review
ID: 10365
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Genome Sequence of a Novel Archaeal Fusellovirus Assembled from the Metagenome of a Mexican Hot Spring
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Genome Sequence of a Novel Archaeal Rudivirus Recovered from a Mexican Hot Spring
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Metagenomic analyses reveal phylogenetic diversity of carboxypeptidase gene sequences in activated sludge of a wastewater treatment plant in Shanghai, China
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