Albin Gustav Sandelin
Professor
Computational and RNA Biology
Ole Maaløes Vej 5
2200 København N.
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The Value of Example Solutions in Pharmacy Education: The role of seniority and gender.
Sandelin, Albin Gustav, Hansen, H. R., Baldursdóttir, S. G., Kristensen, Anders Skov, Bak, Lasse Kristoffer, Christiansen, Frederik Voetmann & Selhuber-Unkel, C. J. M., 2011, In: Pharmacy Education. 11, 1, p. 32-37 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Cross species comparison of C/EBPa and PPAR¿ profiles in mouse and human adipocytes reveals interdependent retention of binding sites
Schmidt, S. F., Jørgensen, M., Chen, Y., Nielsen, R., Sandelin, Albin Gustav & Mandrup, S., 2011, In: BMC Genomics. 12, 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Cross-species ChIP-seq studies provide insights into regulatory strategies of PPAR¿ in adipocytes
Schmidt, S. F., Jørgensen, M., Sandelin, Albin Gustav & Mandrup, S., 2012, In: Transcription. 3, 1, p. 19-24 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Molecular architecture of transcription factor hotspots in early adipogenesis
Siersbæk, R., Baek, S., Rabiee, A., Nielsen, R., Traynor, S., Clarke, N., Sandelin, Albin Gustav, Jensen, O. N., Sung, M., Hager, G. L. & Mandrup, S., 2014, In: Cell Reports. 7, 5, p. 1434-1442 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Lactobacillus rhamnosus GG Genomic and Phenotypic Stability in an Industrial Production Process
Strickertsson, Marianne Stage, Wichmann, A., Jørgensen, M., Vera-Jimenéz, N. I., Wielje, M., Nielsen, Dennis Sandris, Sandelin, Albin Gustav, Chen, Y. & Baker, A., 2020, In: Applied and Environmental Microbiology. 86, 6, 15 p., e02780-19.Research output: Contribution to journal › Journal article › Research › peer-review
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Genomic Stability and Phenotypic Characteristics of Industrially Produced Lacticaseibacillus rhamnosus GG in a Yogurt Matrix
Strickertsson, Marianne Stage, Hui, Y., Nielsen, Dennis Sandris, Vera-Jimenéz, N. I., Olsen, J., Sandelin, Albin Gustav & Wichmann, A., 2021, In: Applied and Environmental Microbiology. 87, 24, 18 p., e01575-21.Research output: Contribution to journal › Journal article › Research › peer-review
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The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line
Suzuki, H., Forrest, A. R. R., van Nimwegen, E., Daub, C. O., Balwierz, P. J., Irvine, K. M., Lassmann, T., Ravasi, T., Hasegawa, Y., de Hoon, M. J. L., Katayama, S., Schroder, K., Carninci, P., Tomaru, Y., Kanamori-Katayama, M., Kubosaki, A., Akalin, A., Ando, Y., Arner, E., Asada, M. & 31 others, , 2009, In: Nature Genetics. 41, 5, p. 553-62 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Interaction of antidepressants with the serotonin and norepinephrine transporters: mutational studies of the S1 substrate binding pocket
Sørensen, L., Andersen, J., Thomsen, M., Hansen, S. M. R., Zhao, X., Sandelin, Albin Gustav, Strømgaard, Kristian & Kristensen, Anders Skov, 2012, In: The Journal of Biological Chemistry. 287, 52, p. 43694-43707 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Interaction of antidepressants with the serotonin and norepinephrine transporters: mutational studies of the S1 substrate binding pocket
Sørensen, L., Andersen, J., Thomsen, M., Hansen, S. M. R., Zhao, X., Sandelin, Albin Gustav, Strømgaard, Kristian & Kristensen, Anders Skov, 2012, In: Journal of Biological Chemistry. 287, p. 43694-43707 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Characterization of Arabidopsis thaliana Promoter Bidirectionality and Antisense RNAs by Inactivation of Nuclear RNA Decay Pathways
Thieffry, A., Vigh, Maria Louisa, Lange, Jette Bornholdt, Ivanov, M., Brodersen, Peter & Sandelin, Albin Gustav, 2020, In: The Plant Cell. 32, 6, p. 1845-1867 23 p.Research output: Contribution to journal › Journal article › Research › peer-review
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PAMP-triggered genetic reprogramming involves widespread alternative transcription initiation and an immediate transcription factor wave
Thieffry, A., López Márquez, Diego, Lange, Jette Bornholdt, Gholami Malekroudi, M., Bressendorff, Simon, Barghetti, A., Sandelin, Albin Gustav & Brodersen, Peter, 2022, In: The Plant Cell. 34, 7, 23 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Comprehensive profiling of the fission yeast transcription start site activity during stress and media response
Thodberg, Malte, Thieffry, A., Lange, Jette Bornholdt, Boyd, M., Holmberg, Christian, Azad, A., Workman, C. T., Chen, Y., Ekwall, K., Nielsen, Olaf & Sandelin, Albin Gustav, 28 Feb 2019, In: Nucleic Acids Research. 47, 4, p. 1671-1691 21 p.Research output: Contribution to journal › Journal article › Research › peer-review
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A step-by-step guide to analyzing CAGE data using R/Bioconductor
Thodberg, Malte & Sandelin, Albin Gustav, 18 Jun 2019, In: F1000Research. 8, 49 p., 886.Research output: Contribution to journal › Journal article › Research › peer-review
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CAGEfightR: analysis of 5'-end data using R/Bioconductor
Thodberg, Malte, Thieffry, A., Vitting-Seerup, K., Andersson, Robin & Sandelin, Albin Gustav, 2019, In: BMC Bioinformatics. 20, 13 p., 487.Research output: Contribution to journal › Journal article › Research › peer-review
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Genomic and chromatin signals underlying transcription start-site selection
Valen, E. & Sandelin, Albin Gustav, 2011, In: Trends in Genetics. 27, 11, p. 475-485 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Discovery of regulatory elements is improved by a discriminatory approach
Valen, E., Sandelin, Albin Gustav, Winther, Ole & Krogh, Anders, 2009, In: PLoS Computational Biology. 5, 11, p. e1000562Research output: Contribution to journal › Journal article › Research › peer-review
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Genome-wide detection and analysis of hippocampus core promoters using DeepCAGE
Valen, E., Pascarella, G., Chalk, A., Maeda, N., Kojima, M., Kawazu, C., Murata, M., Nishiyori, H., Lazarevic, D., Motti, D., Marstrand, T. T., Tang, M-H. E., Zhao, X., Krogh, A., Winther, O., Arakawa, T., Kawai, J., Wells, C., Daub, C., Harbers, M. & 4 others, , 2009, In: Genome Research. 19, 2, p. 255-65 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Biogenic mechanisms and utilization of small RNAs derived from human protein-coding genes
Valen, E., Preker, P., Andersen, P. R., Zhao, X., Chen, Y., Ender, C., Dueck, A., Meister, G., Sandelin, Albin Gustav & Jensen, T. H., 2011, In: Nature Structural and Molecular Biology. 18, 9, p. 1075–1082 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
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CAGE-defined promoter regions of the genes implicated in Rett Syndrome
Vitezic, M., Bertin, N., Andersson, Robin, Lipovich, L., Kawaji, H., Lassmann, T., Sandelin, Albin Gustav, Heutink, P., Goldowitz, D., Ha, T., Zhang, P., Patrizi, A., Fagiolini, M., Forrest, A. R., Carninci, P. & Saxena, A., 2014, In: BMC Genomics. 15, 16 p., 1177.Research output: Contribution to journal › Journal article › Research › peer-review
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The landscape of isoform switches in human cancers
Vitting-Seerup, K. & Sandelin, Albin Gustav, Sep 2017, In: Molecular Cancer Research. 15, 9, p. 1206-1220 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
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spliceR: an R package for classification of alternative splicing and prediction of coding potential from RNA-seq data
Vitting-Seerup, K., Porse, Bo Torben, Sandelin, Albin Gustav & Waage, J., 2014, In: B M C Bioinformatics. 15, p. 1-7 7 p., 81.Research output: Contribution to journal › Journal article › Research › peer-review
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IsoformSwitchAnalyzeR: analysis of changes in genome-wide patterns of alternative splicing and its functional consequences
Vitting-Seerup, K. & Sandelin, Albin Gustav, 2019, In: Bioinformatics. 35, 21, p. 4469-4471Research output: Contribution to journal › Journal article › Research › peer-review
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Modeling promoter grammars with evolving hidden Markov models
Won, K., Sandelin, Albin Gustav, Marstrand, T. T. & Krogh, Anders, 2008, In: Bioinformatics. 24, 15, p. 1669-75 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
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A Two-Layered Targeting Mechanism Underlies Nuclear RNA Sorting by the Human Exosome
Wu, G., Schmid, M., Rib, Leonor, Polak, P., Meola, N., Sandelin, Albin Gustav & Jensen, T. H., 2020, In: Cell Reports. 30, 7, p. 2387-2401, e1-e5Research output: Contribution to journal › Journal article › Research › peer-review
ID: 5007
Most downloads
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spliceR: an R package for classification of alternative splicing and prediction of coding potential from RNA-seq data
Research output: Contribution to journal › Journal article › Research › peer-review
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3340
downloads
Prediction of RNA Polymerase II recruitment, elongation and stalling from histone modification data
Research output: Contribution to journal › Journal article › Research › peer-review
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2988
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Multivariate Hawkes process models of the occurrence of regulatory elements
Research output: Contribution to journal › Journal article › Research › peer-review
Published