Karsten Kristiansen

Karsten Kristiansen

Professor

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    ORCID: 0000-0002-6024-0917

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    1. Published

      A catalog of the mouse gut metagenome: [incl. Author Correction]

      Xiao, L., Feng, Q., Liang, S., Sonne, S. B., Xia, Z., Qiu, X., Li, X., Long, H., Zhang, J., Zhang, D., Liu, C., Fang, Z., Chou, J., Glanville, J., Hao, Q., Kotowska, D. E., Colding, C. S., Licht, T. R., Wu, D., Yu, J. & 17 others, Sung, J. J. Y., Liang, Q., Li, J., Jia, H., Lan, Z., Tremaroli, V., Dworzynski, P., Nielsen, H. B., Bäckhed, G. F., Dore, J., Le Chatelier, E., Ehrlich, S. D., Lin, J. C., Arumugam, Mani, Wang, J., Madsen, L. & Kristiansen, Karsten, 2015, In: Nature Biotechnology. 33, 10, p. 1103-1108 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    2. Published

      High-fat feeding rather than obesity drives taxonomical and functional changes in the gut microbiota in mice

      Xiao, L., Sonne, S. B., Feng, Q., Chen, N., Xia, Z., Li, X., Fang, Z., Zhang, D., Fjære, E., Midtbø, L. K., Derrien, M., Hugenholtz, F., Tang, L., Li, J., Zhang, J., Liu, C., Hao, Q., Vogel, U. B., Mortensen, A., Kleerebezem, M. & 8 others, Licht, T. R., Yang, H., Wang, J., Li, Y., Arumugam, Mani, Wang, J., Madsen, L. & Kristiansen, Karsten, 8 Apr 2017, In: Microbiome. 5, 12 p., 43.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      Shotgun metagenomics of 250 adult twins reveals genetic and environmental impacts on the gut microbiome

      Xie, H., Guo, R., Zhong, H., Feng, Q., Lan, Z., Qin, B., Ward, K. J., Jackson, M. A., Xia, Y., Chen, X., Chen, B., Xia, H., Xu, C., Li, F., Xu, X., Al-Aama, J. Y., Yang, H., Wang, J., Kristiansen, K., Wang, J. & 5 others, Steves, C. J., Bell, J. T., Li, J., Spector, T. D. & Jia, H., 2016, In: Cell Systems. 3, 6, p. 572-584.e3 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    4. Published

      Chord: an ensemble machine learning algorithm to identify doublets in single-cell RNA sequencing data

      Xiong, K., Zhou, H., Lin, C., Yin, J., Kristiansen, Karsten, Yang, H. & Li, G., 2022, In: Communications Biology . 5, 11 p., 510.

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. Published

      An esophageal squamous cell carcinoma classification system that reveals potential targets for therapy

      Xiong, T., Wang, M., Zhao, J., Liu, Q., Yang, C., Luo, W., Li, X., Yang, H., Kristiansen, Karsten, Roy, B. & Zhou, Y., 25 Jul 2017, In: OncoTarget. 8, 30, p. 49851-49860 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      Genomic and microbial factors affect the prognosis of anti-pd-1 immunotherapy in nasopharyngeal carcinoma

      Xu, L., Ma, Y., Fang, Chao, Peng, Z., Gao, F., Moll, J. M., Qin, S., Yu, Q., Hou, Y., Kristiansen, Karsten, Fang, W., Brix, S. & Zhang, L., 2022, In: Frontiers in Oncology. 12, 11 p., 953884.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      An efficient pipeline for ancient DNA mapping and recovery of endogenous ancient DNA from whole-genome sequencing data

      Xu, W., Lin, Y., Zhao, K., Li, H., Tian, Y., Ngatia, J. N., Ma, Y., Sahu, S. K., Guo, H., Guo, X., Xu, Y. C., Liu, Huan, Kristiansen, Karsten, Lan, T. & Zhou, X., 2021, In: Ecology and Evolution. 11, 1, p. 390-401 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. Published

      Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes

      Xu, X., Liu, X., Ge, S., Jensen, J. D., Hu, F., Li, X., Dong, Y., Gutenkunst, R. N., Fang, L., Huang, L., Li, J., He, W., Zhang, G., Zheng, X., Zhang, F., Li, Y., Yu, C., Kristiansen, K., Zhang, X., Wang, J. & 5 others, Wright, M., McCouch, S., Nielsen, Rasmus, Wang, J. & Wang, W., 2012, In: Nature Biotechnology. 30, 1, p. 105-111 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. Published

      Single-cell exome sequencing reveals single-nucleotide mutation characteristics of a kidney tumor: Cell

      Xu, X., Hou, Y., Yin, X., Bao, L., Tang, A., Song, L., Li, F., Tsang, S., Wu, K., Wu, H., He, W., Zeng, L., Xing, M., Wu, R., Jiang, H., Liu, X., Cao, D., Guo, G., Hu, X., Gui, Y. & 19 others, Li, Z., Xie, W., Sun, X., Shi, M., Cai, Z., Wang, B., Zhong, M., Li, J., Lu, Z., Gu, N., Zhang, X., Goodman, L., Bolund, L., Wang, J., Yang, H., Kristiansen, Karsten, Dean, M., Li, Y. & Wang, J., 2012, In: Cell. 148, 5, p. 886-895 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      Assessment of fecal DNA extraction protocols for metagenomic studies

      Yang, F., Sun, J., Luo, H., Ren, H., Zhou, H., Lin, Y., Han, Mo, Chen, B., Liao, H., Brix, S., Li, J., Yang, H., Kristiansen, Karsten & Zhong, H., 2020, In: GigaScience. 9, 7, 12 p., giaa071.

      Research output: Contribution to journal › Journal article › Research › peer-review

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