Karsten Kristiansen

Karsten Kristiansen

Professor


  1. 2024
  2. Published

    Host-gut microbiota interactions shape parasite infections in farmed Atlantic salmon

    Brealey, Jaelle, Kodama, M., Rasmussen, Jacob Agerbo, Hansen, Søren Blikdal, Santos-Bay, Luisa, Lecaudey, L. A., Hansen, M., Fjære, E., Myrmel, L. S., Madsen, L., Bernhard, A., Sveier, H., Kristiansen, Karsten, Gilbert, M Thomas P, Martin, M. D. & Limborg, Morten Tønsberg, 2024, In: mSystems. 9, 2, 29 p., e01043-23.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Early life factors and oral microbial signatures define the risk of caries in a Swedish cohort of preschool children

    Eriksen, C., Boustedt, K., Sonne, Si Brask, Dahlgren, J., Kristiansen, Karsten, Twetman, Svante, Brix, S. & Roswall, J., 2024, In: Scientific Reports. 14, 1, 13 p., 8463.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    Comparison of the DNBSEQ platform and Illumina HiSeq 2000 for bacterial genome assembly

    Hu, T., Chen, J., Lin, X., He, W., Liang, H., Wang, M., Li, W., Wu, Z., Han, Mo, Jin, X., Kristiansen, Karsten, Xiao, L. & Zou, Y., 2024, In: Scientific Reports. 14, 1, 9 p., 1292.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Dynamics of inflammation-associated plasma proteins following faecal microbiota transplantation in patients with psoriatic arthritis and healthy controls: exploratory findings from the FLORA trial [Inkl. Correction]

    Kragsnaes, M. S., Jensen, J. R. B., Nilsson, A. C., Malik, M. I., Munk, H. L., Pedersen, J. K., Horn, H. C., Kruhøffer, M., Kristiansen, Karsten, Mullish, B. H., Marchesi, J. R., Kjeldsen, J., Röttger, R. & Ellingsen, T., 2024, In: RMD Open. 10, 1, 13 p., e003750.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Microbial-derived imidazole propionate links the heart failure-associated microbiome alterations to disease severity

    Raju, S. C., Molinaro, A., Awoyemi, A., Jørgensen, S. F., Braadland, P. R., Nendl, A., Seljeflot, I., Ueland, P. M., McCann, A., Aukrust, P., Vestad, B., Mayerhofer, C., Broch, K., Gullestad, L., Lappegård, K. T., Halvorsen, B., Kristiansen, Karsten, Hov, J. R. & Trøseid, M., 2024, In: Genome Medicine. 16, 1, 12 p., 27.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Deciphering unique and shared interactions between the human gut microbiota and oral antidiabetic drugs

    Ren, H., Shi, Z., Yang, F., Wang, S., Yuan, F., Li, T., Li, M., Zhu, J., Li, J., Wu, K., Zhang, Y., Ning, G., Kristiansen, Karsten, Wang, W., Gu, Y. & Zhong, H., 2024, In: iMeta. 3, 2, 9 p., e179.

    Research output: Contribution to journalComment/debateResearchpeer-review

  8. Published

    The effect of dairy products on liver fat and metabolic risk markers in males with abdominal obesity – a four-arm randomized controlled trial

    Sandby, Karoline, Magkos, Faidon, Chabanova, E., Petersen, E. T., Krarup, T., Bertram, H. C., Kristiansen, Karsten & Geiker, Nina Rica Wium, 2024, In: Clinical Nutrition. 43, 2, p. 534-542

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Gut microbiota signatures in inflammatory bowel disease

    Vestergaard, M. V., Allin, K. H., Eriksen, C., Zakerska-Banaszak, O., Arasaradnam, R. P., Alam, M. T., Kristiansen, Karsten, Brix, S. & Jess, T., 2024, In: United European Gastroenterology Journal. 12, 1, p. 22-33 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Substantial viral diversity in bats and rodents from East Africa: insights into evolution, recombination, and cocirculation

    Wang, D., Yang, X., Ren, Z., Hu, B., Zhao, H., Yang, K., Shi, P., Zhang, Z., Feng, Q., Nawenja, C. V., Obanda, V., Robert, K., Nalikka, B., Waruhiu, C. N., Ochola, G. O., Onyuok, S. O., Ochieng, H., Li, B., Zhu, Y., Si, H. & 9 others, Yin, J., Kristiansen, Karsten, Jin, X., Xu, X., Xiao, M., Agwanda, B., Ommeh, S., Li, J. & Shi, Z. L., 2024, In: Microbiome. 12, 1, 17 p., 72.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. 2023
  12. Published

    Oral administration of helminth fluid modulates distinct tuft cell and immune-metabolic cues linked to reduced body fat

    Andersen, D., Moll, J. M., Arora, P., Danneskiold-Samsøe, Niels Banhos, Sonne, Si Brask, Workman, C. T., Williams, Andrew Richard, Kristiansen, Karsten & Brix, S., 2023, In: Parasite Immunology. 45, 7, 12 p., e12998.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Metabolic effects of diet containing blue mussel (Mytilus edulis) and blue mussel-fed salmon in a mouse model of obesity

    Azad, A. M., Bernhard, A., Shen, A., Myrmel, L. S., Lundebye, A., Lecaudey, L. A., Fjære, E., Tri Ho, Q., Sveier, H., Kristiansen, Karsten, Limborg, Morten Tønsberg & Madsen, L., 2023, In: Food Research International. 169, 11 p., 112927.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Evaluation of the Impact of BaP Exposure on the Gut Microbiota and Allergic Responses in an OVA-Sensitized Mouse Model

    Du, B., Xiao, X., Wang, H., Li, W., Xia, Z., Yang, P., Huang, S. K., Yuan, R., Liu, J., Han, M., Zou, Y., Zhu, J., He, D., Lyu, J., Jin, X., Xu, X., Wang, J., Yang, H., Xiao, L., Liu, X. & 1 others, Kristiansen, Karsten, 2023, In: Environmental Health Perspectives. 131, 6, 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    IgG and IgM cooperate in coating of intestinal bacteria in IgA deficiency

    Eriksen, C., Moll, J. M., Myers, P. N., Pinto, A. R. A., Danneskiold-Samsøe, Niels Banhos, Dehli, R. I., Rosholm, L. B., Dalgaard, M. D., Penders, J., Jonkers, D. M., Pan-Hammarström, Q., Hammarström, L., Kristiansen, Karsten & Brix, Susanne, 2023, In: Nature Communications. 14, 1, 12 p., 8124.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Specific gut pathobionts escape antibody coating and are enriched during flares in patients with severe Crohn's disease

    Eriksen, C., Danneskiold-Samsøe, Niels Banhos, Moll, J. M., Myers, P. N., Bondegaard, P. W., Vejrum, S., Hansen, T. B., Rosholm, L. B., Rausch, P., Allin, K. H., Jess, T., Kristiansen, Karsten, Penders, J., Jonkers, D. & Brix, S., 2023, In: Gut. 73, 3, p. 448-458 11 p., e330677.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    High-resolution single-molecule long-fragment rRNA gene amplicon sequencing of bacterial and eukaryotic microbial communities

    Fang, Chao, Sun, X., Fan, F., Zhang, X., Wang, O., Zheng, Haotian, Peng, Z., Luo, X., CHEN, Ao, Zhang, W., Drmanac, R., Peters, B. A., Song, Z. & Kristiansen, Karsten, 2023, In: Cell Reports Methods. 3, 3, 16 p., 100437.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Intermittent fasting modulates the intestinal microbiota and improves obesity and host energy metabolism

    Hu, X., Xia, K., Dai, M., Han, X., Yuan, P., Liu, J., Liu, S., Jia, F., Chen, J., Jiang, F., Yu, J., Yang, H., Wang, J., Xu, X., Jin, X., Kristiansen, Karsten, Xiao, L., Chen, W., Han, Mo & Duan, S., 2023, In: npj Biofilms and Microbiomes. 9, 1, 9 p., 19.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    A consortium of three-bacteria isolated from human feces inhibits formation of atherosclerotic deposits and lowers lipid levels in a mouse model

    Jie, Z., Zhu, Q., Zou, Y., Wu, Q., Qin, M., He, D., Lin, X., Tong, X., Zhang, J., Jie, Z., Luo, W., Xiao, X., Chen, S., Wu, Y., Guo, G., Zheng, S., Li, Y., Lai, W., Yang, H., Wang, J. & 6 others, Xiao, L., Chen, J., Zhang, T., Kristiansen, Karsten, Jia, H. & Zhong, S., 2023, In: iScience. 26, 6, 22 p., 106960.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    A Gluten-Free Diet during Pregnancy and Early Life Increases Short Chain Fatty Acid-Producing Bacteria and Regulatory T Cells in Prediabetic NOD Mice

    Johansen, Valdemar Brimnes Ingemann, Færø, D., Buschard, K., Kristiansen, Karsten, Pociot, Flemming, Kiilerich, P., Josefsen, K., Haupt-jorgensen, M. & Antvorskov, J. C., 2023, In: Cells. 12, 12, 15 p., 1567.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Response to: "Correspondence on "Safety and efficacy of faecal microbiota transplantation for active peripheral psoriatic arthritis: An exploratory randomised placebo-controlled trial'' by McGonagle et al

    Kragsnaes, M. S., Kjeldsen, J., Horn, H. C., Munk, H. L., Pedersen, J. K., Just, S. A., Ahlquist, P., Davidsen, J. R., Nilsson, A. C., Röttger, R., Kruhøffer, M., Marchesi, J. R., Kristiansen, Karsten, Christensen, R. & Ellingsen, T., 2023, In: Annals of the Rheumatic Diseases. 82, 7, 2 p., e165.

    Research output: Contribution to journalComment/debateResearch

  22. Published

    A catalog of bacterial reference genomes from cultivated human oral bacteria

    Li, W., Liang, H., Lin, X., Hu, T., Wu, Z., He, W., Wang, M., Zhang, J., Jie, Zhuye, Jin, X., Xu, X., Wang, J., Yang, H., Zhang, W., Kristiansen, Karsten, Xiao, L. & Zou, Y., 2023, In: npj Biofilms and Microbiomes. 9, 1, 13 p., 45.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    The genomic landscape of reference genomes of cultivated human gut bacteria

    Lin, X., Hu, T., Chen, J., Liang, H., Zhou, J., Wu, Z., Ye, C., Jin, X., Xu, X., Zhang, W., Jing, X., Yang, T., Wang, J., Yang, H., Kristiansen, Karsten, Xiao, L. & Zou, Y., 2023, In: Nature Communications. 14, 1, 11 p., 1663.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Integrative genetic and single cell RNA sequencing analysis provides new clues to the amyotrophic lateral sclerosis neurodegeneration

    Liu, H., Guan, Liping, Deng, M., Bolund, L., Kristiansen, Karsten, Zhang, J., Luo, Y. & Zhang, Z., 2023, In: Frontiers in Neuroscience. 17, 10 p., 1116087.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Sex differences in the oral microbiome, host traits, and their causal relationships

    Liu, X., Tong, X., Jie, Z., Zhu, J., Tian, L., Sun, Q., Ju, Y., Zou, L., Lu, H., Qiu, X., Li, Q., Liao, Y., Lian, H., Zuo, Y., Chen, X., Rao, W., Ren, Y., Wang, Y., Zi, J., Wang, R. & 11 others, Xu, X., Yang, H., Wang, J., Zong, Y., Liu, W., Hou, Y., Jin, X., Xiao, L., Kristiansen, Karsten, Jia, H. & Zhang, T., 2023, In: iScience. 26, 1, 23 p., 105839.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Genome sequence and genomic analysis of liver abscess caused by hypervirulent Klebsiella pneumoniae

    Pei, N., Liu, X., Jian, Z., Yan, Q., Liu, Q., Kristiansen, Karsten, Li, J. & Liu, W., 2023, In: 3 Biotech. 13, 3, 7 p., 76.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    Co-diversification of an intestinal Mycoplasma and its salmonid host

    Rasmussen, Jacob Agerbo, Kiilerich, P., Madhun, A. S., Waagbø, R., Lock, E. J. R., Madsen, L., Gilbert, M Thomas P, Kristiansen, Karsten & Limborg, Morten Tønsberg, 2023, In: ISME Journal. 17, 5, p. 682-692 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. Published

    Age-dependent changes in the gut microbiota and serum metabolome correlate with renal function and human aging

    Sun, L., Li, Z., Hu, C., Ding, J., Zhou, Q., Pang, G., Wu, Z., Yang, R., Li, S., Li, J., Cai, J., Sun, Y., Li, R., Zhen, H., Sun, S., Zhang, J., Fang, M., Chen, Z., Lv, Y., Cao, Q. & 36 others, Sun, Y., Gong, R., Huang, Z., Duan, Y., Liu, H., Dong, J., Li, J., Ruan, J., Lu, H., He, B., Li, N., Li, T., Xue, W., Li, Y., Shen, J., Yang, F., Zhao, C., Liang, Q., Zhang, M., Chen, C., Gong, H., Hou, Y., Wang, J., Zhang, Y., Yang, H., Zhu, S., Xiao, L., Jin, Z., Guo, H., Zhao, P., Brix, S., Xu, X., Jia, H., Kristiansen, Karsten, Yang, Z. & Nie, C., 2023, In: Aging Cell. 22, 12, 20 p., e14028.

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Published

    Cold-stimulated brown adipose tissue activation is related to changes in serum metabolites relevant to NAD+ metabolism in humans

    U-Din, M., de Mello, V. D., Tuomainen, M., Raiko, J., Niemi, T., Fromme, T., Klåvus, A., Gautier, N., Haimilahti, K., Lehtonen, M., Kristiansen, Karsten, Newman, J. W., Pietiläinen, K. H., Pihlajamäki, J., Amri, E. Z., Klingenspor, M., Nuutila, P., Pirinen, E., Hanhineva, K. & Virtanen, K. A., 26 Sep 2023, In: Cell Reports. 42, 9, 23 p., 113131.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    Epigenetic Regulation of Driver Genes in Testicular Tumorigenesis

    von Eyben, F. E., Kristiansen, Karsten, Kapp, D. S., Hu, R., Preda, O. & Nogales, F. F., 2023, In: International Journal of Molecular Sciences. 24, 4, 28 p., 4148.

    Research output: Contribution to journalReviewResearchpeer-review

  31. 2022
  32. Published

    Distinct Functional Metagenomic Markers Predict the Responsiveness to Anti-PD-1 Therapy in Chinese Non-Small Cell Lung Cancer Patients

    Fang, C., Fang, W., Xu, L., Gao, F., Hou, Y., Zou, H., Ma, Y., Moll, J. M., Yang, Y., Wang, D., Huang, Y., Ren, H., Zhao, H., Qin, S., Zhong, H., Li, J., Liu, S., Yang, H., Wang, J., Brix, S. & 2 others, Kristiansen, Karsten & Zhang, L., 2022, In: Frontiers in Oncology. 12, 13 p., 837525.

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Published

    Maternal gut microbiota during pregnancy and the composition of immune cells in infancy

    Gao, Y., O'Hely, M., Quinn, T. P., Ponsonby, A., Harrison, L. C., Frøkiær, Hanne, Tang, M. L. K., Brix, S., Kristiansen, Karsten, Burgner, D., Saffery, R., Ranganathan, S., Collier, F., Vuillermin, P. & BIS Investigator Grp, B. I. G., 2022, In: Frontiers in Immunology. 13, 11 p., 986340.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Published

    Chromosome-scale assembly and whole-genome sequencing of 266 giant panda roundworms provide insights into their evolution, adaptation and potential drug targets

    Han, L., Lan, T., Li, D., Li, H., Deng, L., Peng, Z., He, S., Zhou, Y., Han, R., Li, L., Lu, Y., Lu, H., Wang, Q., Yang, S., Zhu, Y., Huang, Y., Cheng, X., Yu, J., Wang, Y., Sun, H. & 8 others, Chai, H., Yang, H., Xu, X., Lisby, Michael, Liu, Q., Kristiansen, Karsten, Liu, Huan & Hou, Z., 2022, In: Molecular Ecology Resources. 22, 2, p. 768-785 18 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  35. Published

    Profiling the Atopic Dermatitis Epidermal Transcriptome by Tape Stripping and BRB-seq

    Hu, T., Todberg, T., Andersen, D., Danneskiold-Samsøe, Niels Banhos, Hansen, Sofie Boesgaard Neestrup, Kristiansen, Karsten, Ewald, D. A., Brix, S., da Rosa, J. C., Hoof, I., Skov, Lone & Litman, Thomas, 2022, In: International Journal of Molecular Sciences. 23, 11, 12 p., 6140.

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published

    Sequencing introduced false positive rare taxa lead to biased microbial community diversity, assembly, and interaction interpretation in amplicon studies

    Jia, Y., Zhao, S., Guo, W., Peng, L., Zhao, F., Wang, L., Fan, G., Zhu, Y., Xu, D., Liu, G., Wang, R., Fang, X., Zhang, H., Kristiansen, Karsten, Zhang, W. & Chen, J., 2022, In: Environmental Microbiomes. 17, 18 p., 43.

    Research output: Contribution to journalJournal articleResearchpeer-review

  37. Published

    A pilot study of assessing whole genome sequencing in newborn screening in unselected children in China

    Jian, M., Wang, X., Sui, Y., Fang, M., Feng, C., Huang, Y., Liu, C., Guo, R., Guan, Y., Gao, Y., Wang, Z., Li, S., Cheng, B., Sun, L., Cui, F., Guo, J., Zhan, Y., Zhang, G., Zheng, L., Su, F. & 14 others, Xue, W., Qian, P., Gao, S., Chen, J., Guan, L., Lu, H., Kristiansen, Karsten, Jin, X., Chen, F., Zhao, Y., Hammarström, L., Jiang, X., Liu, J. & Gao, Y., 2022, In: Clinical and Translational Medicine. 12, 6, 12 p., e843.

    Research output: Contribution to journalComment/debateResearchpeer-review

  38. Published

    Life History Recorded in the Vagino-cervical Microbiome Along with Multi-omes

    Jie, Z., Chen, C., Hao, L., Li, F., Song, L., Zhang, X., Zhu, J., Tian, L., Tong, X., Cai, K., Zhang, Z., Ju, Y., Yu, X., Li, Y., Zhou, H., Lu, H., Qiu, X., Li, Q., Liao, Y., Zhou, D. & 21 others, Lian, H., Zuo, Y., Chen, X., Rao, W., Ren, Y., Wang, Y., Zi, J., Wang, R., Liu, N., Wu, J., Zhang, W., Liu, X., Zong, Y., Liu, W., Xiao, L., Hou, Y., Xu, X., Yang, H., Wang, J., Kristiansen, Karsten & Jia, H., 2022, In: Genomics, Proteomics and Bioinformatics. 20, 2, p. 304-321 18 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    Multi-omics analyses of serum metabolome, gut microbiome and brain function reveal dysregulated microbiota-gut-brain axis in bipolar depression

    Li, Z., Lai, J., Zhang, P., Ding, J., Jiang, J., Liu, C., Huang, H., Zhen, H., Xi, C., Sun, Y., Wu, L., Wang, L., Gao, X., Li, Y., Fu, Y., Jie, Z., Li, S., Zhang, D., Chen, Y., Zhu, Y. & 15 others, Lu, S., Lu, J., Wang, D., Zhou, H., Yuan, X., Li, X., Pang, L., Huang, M., Yang, H., Zhang, W., Brix, S., Kristiansen, Karsten, Song, X., Nie, C. & Hu, S., 2022, In: Molecular Psychiatry. 27, 1, 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Published

    Genome-wide association study of Klebsiella pneumoniae identifies variations linked to carbapenems resistance

    Pei, N., Sun, W., He, J., Li, Y., Chen, X., Liang, T., Kristiansen, Karsten, Liu, W. & Li, J., 2022, In: Frontiers in Microbiology. 13, 11 p., 997769.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Large-Scale Genomic Epidemiology of Klebsiella pneumoniae Identified Clone Divergence with Hypervirulent Plus Antimicrobial-Resistant Characteristics Causing Within-Ward Strain Transmissions

    Pei, N., Li, Y., Liu, C., Jian, Z., Liang, T., Zhong, Y., Sun, W., He, J., Cheng, X., Li, H., Lei, X., Liu, X., Deng, Z., Liu, Q., Chen, X., Yan, Q., Kristiansen, Karsten, Li, J. & Liu, W., 2022, In: Microbiology Spectrum. 10, 2, 14 p., e02698-21.

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published
  43. Published
  44. Published

    Pot-pollen supplementation reduces fasting glucose and modulates the gut microbiota in high-fat/high-sucrose fed C57BL/6 mice

    Rebelo, K. S., Nunez, C. E. C., Cazarin, C. B. B., Maróstica Júnior, M. R., Kristiansen, Karsten & Danneskiold-Samsøe, Niels Banhos, 2022, In: Food & Function. 13, 7, p. 3982-3992 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published

    The FASTQ+ format and PISA

    Shi, Quan, Liu, S., Kristiansen, Karsten & Liu, L., 2022, In: Bioinformatics. 38, 19, p. 4639-4642 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    Effects of Lifetime Exposures to Environmental Contaminants on the Adult Gut Microbiome

    Thompson, K. N., Oulhote, Y., Weihe, P., Wilkinson, J. E., Ma, S., Zhong, H., Li, J., Kristiansen, Karsten, Huttenhower, C. & Grandjean, P., 2022, In: Environmental Science & Technology. 56, 23, p. 16985-16995 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    Whole-genome sequence of the planarian Dugesia japonica combining Illumina and PacBio data

    Tian, Q., Guo, Q., Guo, Y., Luo, L., Kristiansen, Karsten, Han, Z., Fang, H. & Zhang, S., 2022, In: Genomics. 114, 2, 10 p., 110293.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    In vitro digestion mimicking conditions in young and elderly reveals marked differences between profiles and potential bioactivity of peptides from meat and soy proteins

    Wang, Chong, Zhao, Fan, Bai, Y., Li, C., Xu, X., Kristiansen, Karsten & Zhou, G., 2022, In: Food Research International. 157, 11 p., 111215.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Effect of gastrointestinal alterations mimicking elderly conditions on in vitro digestion of meat and soy proteins

    Wang, Chong, Zhao, Fan, Bai, Y., Li, C., Xu, X., Kristiansen, Karsten & Zhou, G., 2022, In: Food Chemistry. 383, 9 p., 132465.

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published

    Proteomic Analysis of the Protective Effect of Eriodictyol on Benzo(a)pyrene-Induced Caco-2 Cytotoxicity

    Wang, Chong, Zhao, Fan, Bai, Y., Li, C., Xu, X., Kristiansen, Karsten & Zhou, G., 2022, In: Frontiers in Nutrition. 9, 14 p., 839364.

    Research output: Contribution to journalJournal articleResearchpeer-review

  51. Published

    Chord: an ensemble machine learning algorithm to identify doublets in single-cell RNA sequencing data

    Xiong, K., Zhou, H., Lin, C., Yin, J., Kristiansen, Karsten, Yang, H. & Li, G., 2022, In: Communications Biology . 5, 11 p., 510.

    Research output: Contribution to journalJournal articleResearchpeer-review

  52. Published

    Genomic and microbial factors affect the prognosis of anti-pd-1 immunotherapy in nasopharyngeal carcinoma

    Xu, L., Ma, Y., Fang, Chao, Peng, Z., Gao, F., Moll, J. M., Qin, S., Yu, Q., Hou, Y., Kristiansen, Karsten, Fang, W., Brix, S. & Zhang, L., 2022, In: Frontiers in Oncology. 12, 11 p., 953884.

    Research output: Contribution to journalJournal articleResearchpeer-review

  53. Published

    Casein and red meat proteins differentially affect the composition of the gut microbiota in weaning rats

    Zhao, Fan, Wang, Chong, Song, S., Fang, C., Zhou, G., Li, C. & Kristiansen, Karsten, 2022, In: Food Chemistry. 397, 11 p., 133769.

    Research output: Contribution to journalJournal articleResearchpeer-review

  54. Published

    Effects of Different Storage Temperatures on Bacterial Communities and Functional Potential in Pork Meat

    Zhao, Fan, Wei, Z., Zhou, G., Kristiansen, Karsten & Wang, Chong, 2022, In: Foods. 11, 15, 12 p., 2307.

    Research output: Contribution to journalJournal articleResearchpeer-review

  55. Published

    Intake of a Chicken Protein-Based or Soy Protein-Based Diet Differentially Affects Growth Performance, Absorptive Capacity, and Gut Microbiota in Young Rats

    Zhao, Fan, Wang, Chong, Song, S., Fang, C., Kristiansen, Karsten & Li, C., 2022, In: Molecular Nutrition and Food Research. 66, 13, 14 p., 2101124.

    Research output: Contribution to journalJournal articleResearchpeer-review

  56. Published

    Proteomics and Metabolomics Profiling of Pork Exudate Reveals Meat Spoilage during Storage

    Zhao, Fan, Wei, Z., Bai, Y., Li, C., Zhou, G., Kristiansen, Karsten & Wang, Chong, 2022, In: Metabolites. 12, 7, 15 p., 570.

    Research output: Contribution to journalJournal articleResearchpeer-review

  57. Published

    Over 50,000 Metagenomically Assembled Draft Genomes for the Human Oral Microbiome Reveal New Taxa

    Zhu, J., Tian, L., Chen, P., Han, M., Song, L., Tong, X., Sun, X., Yang, F., Lin, Z., Liu, X., Liu, C., Wang, X., Lin, Y., Cai, K., Hou, Y., Xu, X., Yang, H., Wang, J., Kristiansen, K., Xiao, L. & 3 others, Zhang, T., Jia, H. & Jie, Zhuye, 2022, In: Genomics, Proteomics and Bioinformatics. 20, 2, p. 246-259

    Research output: Contribution to journalJournal articleResearchpeer-review

  58. 2021
  59. Published

    Systems-wide effects of short-term feed deprivation in obese mice

    Andersen, D., Roager, Henrik Munch, Zhang, L., Moll, J. M., Frandsen, H. L., Danneskiold-Samsøe, Niels Banhos, Hansen, Axel Kornerup, Kristiansen, Karsten, Licht, T. R. & Brix, Susanne, 2021, In: Scientific Reports. 11, 11 p., 5716.

    Research output: Contribution to journalJournal articleResearchpeer-review

  60. Published

    Small Intestinal Tuft Cell Activity Associates With Energy Metabolism in Diet-Induced Obesity

    Arora, P., Andersen, D., Moll, J. M., Danneskiold-Samsøe, Niels Banhos, Xu, L., Zhou, B., Kladis, G., Rausch, P., Workman, C. T., Kristiansen, Karsten & Brix, S., 2021, In: Frontiers in Immunology. 12, 13 p., 629391.

    Research output: Contribution to journalJournal articleResearchpeer-review

  61. Published

    Cervicovaginal microbiome dynamics after taking oral probiotics

    Chen, Chen, Hao, L., Zhang, Z., Tian, L., Zhang, X., Zhu, J., Jie, Zhuye, Tong, X., Xiao, L., Zhang, T., Jin, X., Xu, X., Yang, H., Wang, J., Kristiansen, Karsten & Jia, H., 2021, In: Journal of Genetics and Genomics. 48, 8, p. 716-726 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  62. Published

    Maternal prenatal gut microbiota composition predicts child behaviour

    Dawson, S. L., O'Hely, M., Jacka, F. N., Ponsonby, A., Symeonides, C., Loughman, A., Collier, F., Moreno-Betancur, M., Sly, P., Burgner, D., Tang, M. L. K., Saffery, R., Ranganathan, S., Conlon, M. A., Harrison, L. C., Brix, S., Kristiansen, Karsten, Vuillermin, P. & the BIS Investigator Group, T. B. I. G., 2021, In: EBioMedicine. 68, 10 p., 103400.

    Research output: Contribution to journalJournal articleResearchpeer-review

  63. Published

    The maternal gut microbiome during pregnancy and offspring allergy and asthma

    Gao, Y., Nanan, R., Macia, L., Tan, J., Sominsky, L., Quinn, T. P., O'Hely, M., Ponsonby, A., Tang, M. L. K., Collier, F., Strickland, D. H., Dhar, P., Brix, S., Phipps, S., Sly, P. D., Ranganathan, S., Stokholm, Jakob, Kristiansen, Karsten, Gray, L. E. K. & Vuillermin, P., 2021, In: Journal of Allergy and Clinical Immunology. 148, 3, p. 669-678

    Research output: Contribution to journalJournal articleResearchpeer-review

  64. Published

    Chromosome-scale genomes provide new insights into subspecies divergence and evolutionary characteristics of the giant panda

    Guang, X., Lan, T., Wan, Q. H., Huang, Y., Li, H., Zhang, M., Li, R., Zhang, Z., Lei, Y., Zhang, L., Zhang, H., Li, D., Li, X., Li, H., Xu, Y., Qiao, M., Wu, D., Tang, K., Zhao, P., Lin, J-Q. & 11 others, Sahu, S. K., Liang, Q., Jiang, W., Zhang, D., Xu, X., Liu, X., Lisby, Michael, Yang, H., Kristiansen, Karsten, Liu, Huan & Fang, S., 2021, In: Science Bulletin. 66, 19, p. 2002-2013 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  65. Published

    Adipose MDM2 regulates systemic insulin sensitivity

    Hallenborg, P., Jensen, Benjamin Anderschou Holbech, Fjære, E., Petersen, R. K., Belmaâti, M. S., Rasmussen, S. S., Gunnarsson, J. P., Lauritzen, P., Cheng, K. K. Y., Hermansson, M., Sonne, Si Brask, Ejsing, C. S., Xu, A., Kratchmarova, I., Krüger, M., Madsen, L., Kristiansen, Karsten & Blagoev, B., 2021, In: Scientific Reports. 11, 17 p., 21839.

    Research output: Contribution to journalJournal articleResearchpeer-review

  66. Published

    A porcine brain-wide RNA editing landscape

    Huang, J., Lin, L., Dong, Z., Yang, L., Zheng, T., Gu, W., Zhang, Y., Yin, T., Sjöstedt, E., Mulder, J., Uhlén, M., Kristiansen, Karsten, Bolund, L. & Luo, Y., 2021, In: Communications Biology . 4, 12 p., 717.

    Research output: Contribution to journalJournal articleResearchpeer-review

  67. Published

    Lysates of Methylococcus capsulatus Bath induce a lean-like microbiota, intestinal FoxP3+RORγt+IL-17+ Tregs and improve metabolism

    Jensen, B. A. H., Holm, J. B., Larsen, I. S., von Burg, N., Derer, S., Sonne, S. B., Pærregaard, S. I., Damgaard, M. V., Indrelid, S. A., Rivollier, A., Agrinier, A. L., Sulek, K., Arnoldussen, Y. J., Fjære, E., Marette, A., Angell, I. L., Rudi, K., Treebak, J. T., Madsen, L., Åkesson, C. P. & 5 others, Agace, W., Sina, C., Kleiveland, C. R., Kristiansen, Karsten & Lea, T. E., 2021, In: Nature Communications. 12, 19 p., 1093.

    Research output: Contribution to journalJournal articleResearchpeer-review

  68. Published

    A transomic cohort as a reference point for promoting a healthy human gut microbiome

    Jie, Z., Liang, S., Ding, Q., Li, F., Tang, S., Wang, D., Lin, Y., Chen, P., Cai, K., Qiu, X., Li, Q., Liao, Y., Zhou, D., Lian, H., Zuo, Y., Chen, X., Rao, W., Ren, Y., Wang, Y., Zi, J. & 17 others, Wang, R., Zhou, H., Lu, H., Wang, X., Zhang, W., Zhang, T., Xiao, L., Zong, Y., Liu, W., Yang, H., Wang, J., Hou, Y., Liu, X., Kristiansen, Karsten, Zhong, H., Jia, H. & Xu, X., 2021, In: Medicine in Microecology. 8, 10 p., 100039.

    Research output: Contribution to journalJournal articleResearchpeer-review

  69. Published

    Dairy consumption and physical fitness tests associated with fecal microbiome in a Chinese cohort

    Jie, Zhuye, Liang, S., Ding, Q., Li, F., Sun, X., Lin, Y., Chen, P., Cai, K., Wang, X., Zhang, T., Zhou, H., Lu, H., Xiao, L., Yang, H., Wang, J., Hou, Y., Kristiansen, Karsten, Jia, H. & Xu, X., 2021, In: Medicine in Microecology. 9, 9 p., 100038.

    Research output: Contribution to journalJournal articleResearchpeer-review

  70. Published

    Disease trends in a young Chinese cohort according to fecal metagenome and plasma metabolites

    Jie, Zhuye, Liang, S., Ding, Q., Li, F., Sun, X., Lin, Y., Chen, P., Cai, K., Zhou, H., Lu, H., Wang, X., Zhang, T., Xiao, L., Yang, H., Wang, J., Hou, Y., Kristiansen, Karsten, Jia, H. & Xu, X., 2021, In: Medicine in Microecology. 9, 10 p., 100037.

    Research output: Contribution to journalJournal articleResearchpeer-review

  71. Published

    The Baseline Gut Microbiota Directs Dieting-Induced Weight Loss Trajectories

    Jie, Zhuye, Yu, X., Liu, Y., Sun, L., Chen, P., Ding, Q., Gao, Y., Zhang, X., Yu, M., Liu, Y., Zhang, Yong, Kristiansen, Karsten, Jia, H., Brix, S. & Cai, K., 2021, In: Gastroenterology. 160, 6, p. 2029-2042, e1-e16

    Research output: Contribution to journalJournal articleResearchpeer-review

  72. Published

    Safety and efficacy of faecal microbiota transplantation for active peripheral psoriatic arthritis: An exploratory randomised placebo-controlled trial

    Kragsnaes, M. S., Kjeldsen, J., Horn, H. C., Munk, H. L., Pedersen, J. K., Just, S. A., Ahlquist, P., Pedersen, F. M., de Wit, M., Möller, S., Andersen, V., Kristiansen, Karsten, Kinggaard Holm, D., Holt, H. M., Christensen, R. & Ellingsen, T., 2021, In: Annals of the Rheumatic Diseases. 80, 9, p. 1158-1167 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  73. Published

    Network of Interactions Between Gut Microbiome, Host Biomarkers, and Urine Metabolome in Carotid Atherosclerosis

    Li, R-J., Jie, Z-Y., Feng, Q., Fang, R-L., Li, F., Gao, Y., Xia, H-H., Zhong, H-Z., Tong, B., Madsen, L., Zhang, J-H., Liu, C-L., Xu, Z-G., Wang, J., Yang, H-M., Xu, X., Hou, Y., Brix, S., Kristiansen, K., Yu, X-L. & 2 others, Jia, H. & He, K., 2021, In: Frontiers in Cellular and Infection Microbiology. 11, 12 p., 708088.

    Research output: Contribution to journalJournal articleResearchpeer-review

  74. Published

    Characterization of the human skin resistome and identification of two microbiota cutotypes

    Li, Z., Xia, J., Jiang, L., Tan, Y., An, Y., Zhu, X., Ruan, J., Chen, Z., Zhen, H., Ma, Y., Jie, Z., Xiao, L., Yang, H., Wang, J., Kristiansen, K., Xu, X., Jin, L., Nie, C., Krutmann, J., Liu, X. & 1 others, Wang, J., 2021, In: Microbiome. 9, 18 p., 47.

    Research output: Contribution to journalJournal articleResearchpeer-review

  75. Published

    A genome-wide association study for gut metagenome in Chinese adults illuminates complex diseases

    Liu, X., Tang, S., Zhong, H., Tong, X., Jie, Z., Ding, Q., Wang, D., Guo, R., Xiao, L., Xu, X., Yang, H., Wang, J., Zong, Y., Liu, W., Liu, X., Zhang, Y., Brix, S., Kristiansen, K., Hou, Y., Jia, H. & 1 others, Zhang, T., 2021, In: Cell Discovery. 7, 15 p., 9.

    Research output: Contribution to journalJournal articleResearchpeer-review

  76. Published

    Gut Microbiota Perturbation in IgA Deficiency Is Influenced by IgA-Autoantibody Status

    Moll, J. M., Myers, P. N., Zhang, C., Eriksen, C., Wolf, J., Appelberg, K. S., Lindberg, G., Bahl, M. I., Zhao, H., Pan-Hammarström, Q., Cai, K., Jia, H., Borte, S., Nielsen, H. B., Kristiansen, Karsten, Brix, S. & Hammarström, L., 2021, In: Gastroenterology. 160, 7, p. 2423-2434.e5

    Research output: Contribution to journalJournal articleResearchpeer-review

  77. Published

    Longitudinal Study of the Drug Resistance in Klebsiella pneumoniae of a Tertiary Hospital, China: Phenotypic Epidemiology Analysis (2013-2018)

    Pei, N., Liu, Q., Cheng, X., Liang, T., Jian, Z., Wang, S., Zhong, Y., He, J., Zhou, M., Kristiansen, Karsten, Chen, W., Liu, W. & Li, J., 2021, In: Infection and Drug Resistance. 14, p. 613-626 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  78. Published

    Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts

    Rasmussen, Jacob Agerbo, Villumsen, Kasper Rømer, Duchene, David, Puetz, Lara Christine, Delmont, T. O., Sveier, H., Jørgensen, Louise von Gersdorff, Præbel, K., Martin, M. D., Bojesen, Anders Miki, Gilbert, M Thomas P, Kristiansen, Karsten & Limborg, Morten Tønsberg, 2021, In: Communications Biology. 4, 10 p., 579.

    Research output: Contribution to journalJournal articleResearchpeer-review

  79. Published

    Nutritional composition and bioactive compounds of Melipona seminigra pot-pollen from Amazonas, Brazil

    Rebelo, K. S., Cazarin, C. B. B., Iglesias, A. H., Stahl, M. A., Kristiansen, Karsten, Carvalho-Zilse, G. A., Grimaldi, R., Reyes, F. G. R., Danneskiold-Samsøe, Niels Banhos & Júnior, M. R. M., 2021, In: Journal of the Science of Food and Agriculture. 101, 12, p. 4907-4915 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  80. Published

    Developmental trajectory of the healthy human gut microbiota during the first 5 years of life

    Roswall, J., Olsson, L. M., Kovatcheva-Datchary, P., Nilsson, S., Tremaroli, V., Simon, M., Kiilerich, P., Akrami, R., Kramer, M., Uhlen, M., Gummesson, A., Kristiansen, Karsten, Dahlgren, J. & Bäckhed, F., 2021, In: Cell Host & Microbe. 29, 5, p. 765-776.e3 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  81. Published

    Status and perspectives of biomarker validation for diagnosis, stratification, and treatment

    Skov, J., Kristiansen, Karsten, Jespersen, J. & Olesen, P., 2021, In: Public Health. 190, p. 173-175 3 p.

    Research output: Contribution to journalLetterResearchpeer-review

  82. Published

    An efficient pipeline for ancient DNA mapping and recovery of endogenous ancient DNA from whole-genome sequencing data

    Xu, W., Lin, Y., Zhao, K., Li, H., Tian, Y., Ngatia, J. N., Ma, Y., Sahu, S. K., Guo, H., Guo, X., Xu, Y. C., Liu, Huan, Kristiansen, Karsten, Lan, T. & Zhou, X., 2021, In: Ecology and Evolution. 11, 1, p. 390-401 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  83. Published

    Sex- and age-related trajectories of the adult human gut microbiota shared across populations of different ethnicities

    Zhang, X., Zhong, H., Li, Y., Shi, Z., Ren, H., Zhang, Z., Zhou, X., Tang, S., Han, X., Lin, Y., Yang, F., Wang, D., Fang, C., Fu, Z., Wang, L., Zhu, S., Hou, Y., Xu, X., Yang, H., Wang, J. & 3 others, Kristiansen, Karsten, Li, J. & Ji, L., 2021, In: Nature Aging. 1, 1, p. 87-100 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  84. Published

    Characterization of respiratory microbial dysbiosis in hospitalized COVID-19 patients

    Zhong, H., Wang, Y., Shi, Z., Zhang, L., Ren, H., He, W., Zhang, Z., Zhu, A., Zhao, J., Xiao, F., Yang, F., Liang, T., Ye, F., Zhong, B., Ruan, S., Gan, M., Zhu, J., Li, F., Li, F., Wang, D. & 13 others, Li, J., Ren, P., Zhu, S., Yang, H., Wang, J., Kristiansen, Karsten, Tun, H. M., Chen, W., Zhong, N., Xu, X., Li, Y., Li, J. & Zhao, J., 2021, In: Cell Discovery. 7, 14 p., 23.

    Research output: Contribution to journalJournal articleResearchpeer-review

  85. Published

    An Expanded Gene Catalog of Mouse Gut Metagenomes

    Zhu, J., Ren, H., Zhong, H., Li, Xiaoping, Zou, Y., Han, Mo, Li, M., Madsen, L., Kristiansen, Karsten & Xiao, L., 2021, In: mSphere. 6, 1, 12 p., e-01119-20.

    Research output: Contribution to journalJournal articleResearchpeer-review

  86. Published

    Characterization and description of Faecalibacterium butyricigenerans sp. nov. and F. longum sp. nov., isolated from human faeces

    Zou, Y., Lin, X., Xue, W., Tuo, L., Chen, M., Chen, X., Sun, C., Li, F., Liu, S., Dai, Y., Kristiansen, Karsten & Xiao, L., 2021, In: Scientific Reports. 11, 13 p., 11340.

    Research output: Contribution to journalJournal articleResearchpeer-review

  87. Published

    Taxonomic Description and Genome Sequence of Christensenella intestinihominis sp. nov., a Novel Cholesterol-Lowering Bacterium Isolated From Human Gut

    Zou, Y., Xue, W., Lin, X., Hu, T., Liu, S., Sun, C., Luo, G., Lv, M., Dai, Y., Kristiansen, Karsten & Xiao, L., 2021, In: Frontiers in Microbiology. 12, 13 p., 632361.

    Research output: Contribution to journalJournal articleResearchpeer-review

  88. 2020
  89. Published

    Body fluid from the parasitic worm Ascaris suum inhibits broad-acting pro-inflammatory programs in dendritic cells

    Arora, P., Moll, J. M., Andersen, D., Workman, C. T., Williams, Andrew Richard, Kristiansen, Karsten & Brix, S., 2020, In: Immunology. 159, 3, p. 322-334

    Research output: Contribution to journalJournal articleResearchpeer-review

  90. Published

    Clinical characteristics of the BREATHE cohort: a real-life study on patients with asthma and COPD

    Backer, V., Klein, D. K., Bodtger, U., Romberg, K., Porsbjerg, C., Erjefält, J. S., Kristiansen, K., Xu, R., Silberbrandt, A., Frøssing, L., Hvidtfeldt, M., Obling, N., Jarenbäck, L., Nasr, A., Tufvesson, E., Mori, M., Winther-Jensen, M., Karlsson, L., Nihlén, U., Flintegaard, T. V. & 1 others, Bjermer, L., 2020, In: European Clinical Respiratory Journal. 7, 1, 11 p., 1736934.

    Research output: Contribution to journalJournal articleResearchpeer-review

  91. Published

    The anti-obesogenic effect of lean fish species is influenced by the fatty acid composition in fish fillets

    Fjære, E., Myrmel, L. S., Dybing, K., Kuda, O., Jensen, Benjamin Anderschou Holbech, Rossmeisl, M., Frøyland, L., Kristiansen, Karsten & Madsen, L., 2020, In: Nutrients. 12, 10, 18 p., 3038.

    Research output: Contribution to journalJournal articleResearchpeer-review

  92. Published

    A Chromosome-Level Genome Assembly of Dendrobium Huoshanense Using Long Reads and Hi-C Data

    Han, B., Jing, Y., Dai, J., Zheng, T., Gu, F., Zhao, Q., Zhu, F., Song, X., Deng, H., Wei, P., Song, C., Liu, D., Jiang, X., Wang, F., Chen, Y., Sun, C., Yao, H., Zhang, L., Chen, N., Chen, S. & 17 others, Li, X., Wei, Y., Ouyang, Z., Yan, H., Lu, J., Wang, H., Guo, L., Kong, L., Zhao, J., Li, S., Luo, L., Kristiansen, Karsten, Feng, Z., Sun, S., Chen, C., Yue, Z. & Chen, N., 2020, In: Genome Biology and Evolution. 12, 12, p. 2486-2490 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  93. Published

    Pretreatment Prevotella-to-Bacteroides ratio and markers of glucose metabolism as prognostic markers for dietary weight loss maintenance

    Hjorth, Mads Fiil, Christensen, Lars, Kjølbæk, Louise, Larsen, L. H., Roager, Henrik Munch, Kiilerich, P., Kristiansen, Karsten & Astrup, A., 2020, In: European Journal of Clinical Nutrition. 74, 2, p. 338-347 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  94. Published

    A catalog of microbial genes from the bovine rumen unveils a specialized and diverse biomass-degrading environment

    Li, J., Zhong, H., Ramayo-Caldas, Y., Terrapon, N., Lombard, V., Potocki-Veronese, G., Estellé, J., Popova, M., Yang, Z., Zhang, H., Li, F., Tang, S., Yang, F., Chen, W., Chen, B., Li, J., Guo, J., Martin, C., Maguin, E., Xu, X. & 7 others, Yang, H., Wang, J., Madsen, L., Kristiansen, Karsten, Henrissat, B., Ehrlich, S. D. & Morgavi, D. P., 2020, In: GigaScience. 9, 6, 15 p., giaa057.

    Research output: Contribution to journalJournal articleResearchpeer-review

  95. Published

    Data integration for prediction of weight loss in randomized controlled dietary trials

    Nielsen, R. L., Helenius, M., Garcia, S. L., Roager, H. M., Aytan-Aktug, D., Hansen, L. B. S., Lind, M. V., Vogt, J. K., Dalgaard, M. D., Bahl, M. I., Jensen, C. B., Muktupavela, R., Warinner, C., Aaskov, V., Gøbel, R., Kristensen, M. B., Frøkiær, H., Sparholt, M. H., Christensen, A. F., Vestergaard, H. & 8 others, Hansen, Torben, Kristiansen, Karsten, Brix, Susanne, Petersen, T. N., Lauritzen, Lotte, Licht, T. R., Pedersen, Oluf Borbye & Gupta, R., 2020, In: Scientific Reports. 10, 15 p., 20103.

    Research output: Contribution to journalJournal articleResearchpeer-review

  96. Published

    Response of the Human Milk Microbiota to a Maternal Prebiotic Intervention Is Individual and Influenced by Maternal Age

    Padilha, M., Brejnrod, A., Danneskiold-Samsøe, Niels Banhos, Hoffmann, C., Iaucci, J. D. M., Cabral, V. P., Xavier-Santos, D., Taddei, C. R., Kristiansen, Karsten & Saad, S. M. I., 2020, In: Nutrients. 12, 4, 16 p., 1081.

    Research output: Contribution to journalJournal articleResearchpeer-review

  97. Published

    Comparative Analysis of Sample Extraction and Library Construction for Shotgun Metagenomics

    Peng, Z., Zhu, X., Wang, Z., Yan, X., Wang, G., Tang, M., Jiang, A. & Kristiansen, Karsten, 2020, In: Bioinformatics and Biology Insights. 14, 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  98. Published

    Treatment with the anti-IgE monoclonal antibody omalizumab in women with asthma undergoing fertility treatment: a proof-of-concept study - The PRO-ART study protocol

    Tidemandsen, C., Juul Gade, E., Ulrik, Charlotte Suppli, Nielsen, Henriette Svarre, Oxlund-Mariegaard, B. S., Kristiansen, Karsten, Freiesleben, Nina la Cour, Nøhr, B., Udengaard, H. & Backer, Vibeke, 2020, In: BMJ Open. 10, 11, 7 p., e037041.

    Research output: Contribution to journalJournal articleResearchpeer-review

  99. Published

    Assessment of fecal DNA extraction protocols for metagenomic studies

    Yang, F., Sun, J., Luo, H., Ren, H., Zhou, H., Lin, Y., Han, Mo, Chen, B., Liao, H., Brix, S., Li, J., Yang, H., Kristiansen, Karsten & Zhong, H., 2020, In: GigaScience. 9, 7, 12 p., giaa071.

    Research output: Contribution to journalJournal articleResearchpeer-review

  100. Published

    The draft genome of mandrill (Mandrillus sphinx): an Old World monkey

    Yin, Y., Yang, T., Liu, Huan, Huang, Z., Zhang, Y., Song, Y., Wang, W., Guang, X., Sahu, S. K. & Kristiansen, Karsten, 2020, In: Scientific Reports. 10, 8 p., 2431.

    Research output: Contribution to journalJournal articleResearchpeer-review

  101. Published

    Reply to: Transformation of naked mole-rat cells

    Zhao, J., Tian, X., Zhu, Y., Zhang, Z., Rydkina, E., Yuan, Y., Zhang, H., Roy, B., Cornwell, A., Nevo, E., Shang, X., Huang, R., Kristiansen, Karsten, Seluanov, A., Fang, X. & Gorbunova, V., 2020, In: Nature. 583, 7814, p. E8-E13

    Research output: Contribution to journalLetterResearchpeer-review

  102. Published

    Metagenome-wide association of gut microbiome features for schizophrenia

    Zhu, F., Ju, Y., Wang, W., Wang, Q., Guo, R., Ma, Q., Sun, Q., Fan, Y., Xie, Y., Yang, Z., Jie, Z., Zhao, B., Xiao, L., Yang, L., Zhang, T., Feng, J., Guo, L., He, X., Chen, Y., Chen, C. & 10 others, Gao, C., Xu, X., Yang, H., Wang, J., Dang, Y., Madsen, L., Brix, S., Kristiansen, Karsten, Jia, H. & Ma, X., 2020, In: Nature Communications. 11, 10 p., 1612.

    Research output: Contribution to journalJournal articleResearchpeer-review

  103. Published

    Transplantation of microbiota from drug-free patients with schizophrenia causes schizophrenia-like abnormal behaviors and dysregulated kynurenine metabolism in mice

    Zhu, F., Guo, R., Wang, W., Ju, Y., Wang, Q., Ma, Q., Sun, Q., Fan, Y., Xie, Y., Yang, Z., Jie, Z., Zhao, B., Xiao, L., Yang, L., Zhang, T., Liu, B., Guo, L., He, X., Chen, Y., Chen, C. & 10 others, Gao, C., Xu, X., Yang, H., Wang, J., Dang, Y., Madsen, L., Brix, S., Kristiansen, Karsten, Jia, H. & Ma, X., 2020, In: Molecular Psychiatry. 25, 11, p. 2905-2918 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  104. 2019
  105. Published

    Viral integration drives multifocal HCC during the occult HBV infection

    Chen, X-P., Long, X., Jia, W., Wu, H-J., Zhao, J., Liang, H-F., Laurence, A., Zhu, J., Dong, D., Chen, Y., Lin, L., Xia, Y-D., Li, W-Y., Li, G-B., Zhao, Z-K., Wu, K., Hou, Y., Yu, J-J., Xiao, W., Wang, G-P. & 6 others, Zhu, P., Chen, W., Bai, M., Jian, Y., Kristiansen, Karsten & Chen, Q., 2019, In: Journal of Experimental & Clinical Cancer Research. 38, 11 p., 261.

    Research output: Contribution to journalJournal articleResearchpeer-review

  106. Published

    Interplay between food and gut microbiota in health and disease

    Danneskiold-Samsøe, Niels Banhos, Dias de Freitas Queiroz Barros, H., Santos, R., Bicas, J. L., Cazarin, C. B. B., Madsen, L., Kristiansen, Karsten, Pastore, G. M., Brix, S. & Maróstica Júnior, M. R., 2019, In: Food Research International. 115, p. 23-31

    Research output: Contribution to journalReviewResearchpeer-review

  107. Published

    Overexpression of cyclooxygenase-2 in adipocytes reduces fat accumulation in inguinal white adipose tissue and hepatic steatosis in high-fat fed mice

    Danneskiold-Samsøe, Niels Banhos, Sonne, Si Brask, Larsen, J. M., Hansen, Ann Normann, Fjære, E., Isidor, Marie Sophie, Petersen, S., Henningsen, J., Severi, I., Sartini, L., Schobers, Y., Wolf, J., Nockhers, W. A., Wolfrum, C., Cinti, S., Sina, C., Hansen, Jacob B., Madsen, L., Brix, S. & Kristiansen, Karsten, 2019, In: Scientific Reports. 9, 13 p., 8979.

    Research output: Contribution to journalJournal articleResearchpeer-review

  108. Published

    Genome Sequencing Explores Complexity of Chromosomal Abnormalities in Recurrent Miscarriage

    Dong, Z., Yan, J., Xu, F., Yuan, J., Jiang, H., Wang, H., Chen, H., Zhang, L., Ye, L., Xu, J., Shi, Y., Yang, Z., Cao, Y., Chen, L., Li, Q., Zhao, X., Li, J., Chen, A., Zhang, W., Wong, H. G. & 19 others, Qin, Y., Zhao, H., Chen, Y., Li, P., Ma, T., Wang, W., Kwok, Y. K., Jiang, Y., Pursley, A. N., Chung, J. P. W., Hong, Y., Kristiansen, Karsten, Yang, H., Piña-Aguilar, R. E., Leung, T. Y., Cheung, S. W., Morton, C. C., Choy, K. W. & Chen, Z. J., 2019, In: American Journal of Human Genetics. 105, 6, p. 1102-1111 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  109. Published

    The first chromosome-level genome for a marine mammal as a resource to study ecology and evolution

    Fan, G., Zhang, Y., Liu, X., Wang, J., Sun, Z., Sun, S., Zhang, H., Chen, J., Lv, M., Han, K., Tan, X., Hu, J., Guan, R., Fu, Y., Liu, S., Chen, X., Xu, Q., Qin, Y., Liu, L., Bai, J. & 26 others, Wang, O., Tang, J., Lu, H., Shang, Z., Wang, B., Hu, G., Zhao, X., Zou, Y., Chen, A., Gong, M., Zhang, W., Lee, S. M., Li, S., Liu, J., Li, Z., Lu, Y., Sabir, J. S. M., Sabir, M. J., Khan, M., Hajrah, N. H., Yin, Y., Kristiansen, Karsten, Yang, H., Wang, J., Xu, X. & Liu, X., 2019, In: Molecular Ecology Resources. 19, 4, p. 944-956

    Research output: Contribution to journalJournal articleResearchpeer-review

  110. Published

    Effects of exercise and dietary protein sources on adiposity and insulin sensitivity in obese mice

    Fjære, E., Myrmel, L. S., Lützhøft, Ditte Olsen, Andersen, H., Holm, J. B., Kiilerich, P., Hannisdal, R., Liaset, B., Kristiansen, Karsten & Madsen, L., 2019, In: Journal of Nutritional Biochemistry. 66, p. 98-109

    Research output: Contribution to journalJournal articleResearchpeer-review

  111. Published

    Prevotella-to-Bacteroides ratio predicts body weight and fat loss success on 24-week diets varying in macronutrient composition and dietary fiber: results from a post-hoc analysis

    Hjorth, Mads Fiil, Blædel, T., Bendtsen, L. Q., Lorenzen, J. K., Holm, J. B., Kiilerich, P., Roager, Henrik Munch, Kristiansen, Karsten, Larsen, L. H. & Astrup, A., 1 Jan 2019, In: International Journal of Obesity. 43, 1, p. 149-157

    Research output: Contribution to journalJournal articleResearchpeer-review

  112. Published

    Habitat fragmentation is associated with dietary shifts and microbiota variability in common vampire bats

    Ingala, M. R., Becker, D. J., Holm, J. B., Kristiansen, Karsten & Simmons, N. B., 2019, In: Ecology and Evolution. 9, 11, p. 6508-6523 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  113. Published

    Improving Species Identification of Ancient Mammals Based on Next-Generation Sequencing Data

    Lan, T. M., Lin, Y., Njaramba-Ngatia, J., Guo, X. S., Li, R. G., Li, H. M., Kumar-Sahu, S., Wang, X., Yang, X. J., Guo, H. B., Xu, W. H., Kristiansen, Karsten, Liu, Huan & Xu, Y. C., 2019, In: Genes. 10, 7, 18 p., 509.

    Research output: Contribution to journalJournal articleResearchpeer-review

  114. Published

    Human Paneth cell α-defensin-5 treatment reverses dyslipidemia and improves glucoregulatory capacity in diet-induced obese mice

    Larsen, I. S., Fritzen, Andreas Mæchel, Carl, Christian Strini, Agerholm, M., Damgaard, Mads Vargas, Holm, J. B., Marette, A., Nordkild, P., Kiens, Bente, Kristiansen, Karsten, Wehkamp, J. & Jensen, Benjamin Anderschou Holbech, 2019, In: American Journal of Physiology: Endocrinology and Metabolism. 317, 1, p. E42-E52 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  115. Published

    Seafood intake and the development of obesity, insulin resistance and type 2 diabetes

    Liaset, B., Øyen, J., Jacques, H., Kristiansen, Karsten & Madsen, L., 2019, In: Nutrition Research Reviews. 32, 1, p. 146-167

    Research output: Contribution to journalJournal articleResearchpeer-review

  116. Published

    Mechanisms preserving insulin action during high dietary fat intake

    Lundsgaard, Anne-Marie, Holm, J. B., Sjøberg, K. A., Bojsen-Møller, K. N., Myrmel, L. S., Fjære, E., Jensen, Benjamin Anderschou Holbech, Nicolaisen, T. S., Hingst, J. R., Hansen, S. L., Doll, S., Geyer, P. E., Deshmukh, Atul Shahaji, Holst, Jens Juul, Madsen, L., Kristiansen, Karsten, Wojtaszewski, Jørgen F P, Richter, Erik A. & Kiens, Bente, 2019, In: Cell Metabolism. 29, 1, p. 50-63, e1-e4 19 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  117. Published

    The Impact of Different Animal-Derived Protein Sources on Adiposity and Glucose Homeostasis during Ad Libitum Feeding and Energy Restriction in Already Obese Mice

    Myrmel, L. S., Fauske, K. R., Fjære, E., Bernhard, A., Liisberg, U., Hasselberg, A. E., Øyen, J., Kristiansen, Karsten & Madsen, L., 2019, In: Nutrients. 11, 5, 19 p., 1153.

    Research output: Contribution to journalJournal articleResearchpeer-review

  118. Published

    Salmon in combination with high glycemic index carbohydrates increases diet-induced thermogenesis compared with salmon with low glycemic index carbohydrates: An acute randomized cross-over meal test study

    Nielsen, L. V., Nyby, S., Klingenberg, L., Ritz, C., Sundekilde, U. K., Bertram, H. C., Westerterp-Plantenga, M. S., Liaset, B., Kristiansen, Karsten, Madsen, L. & Raben, Anne, 2019, In: Nutrients. 11, 2, 19 p., 365.

    Research output: Contribution to journalJournal articleResearchpeer-review

  119. Published

    The human milk microbiota is modulated by maternal diet

    Padilha, M., Danneskiold-Samsøe, Niels Banhos, Brejnrod, A., Hoffmann, C., Cabral, V. P., Iaucci, J. D. M., Sales, C. H., Fisberg, R. M., Cortez, R. V., Brix, S., Taddei, C. R., Kristiansen, Karsten & Saad, S. M. I., 2019, In: Microorganisms. 7, 11, 18 p., 502.

    Research output: Contribution to journalJournal articleResearchpeer-review

  120. Published

    Whole grain-rich diet reduces body weight and systemic low-grade inflammation without inducing major changes of the gut microbiome: a randomised cross-over trial

    Roager, H. M., Vogt, J. K., Kristensen, M. B., Hansen, L. B. S., Ibrügger, S., Mærkedahl, R. B., Bahl, M. I., Lind, M. V., Nielsen, R. L., Frøkiær, H., Gøbel, R. J., Landberg, R., Ross, A. B., Brix, S., Holck, J., Meyer, A. S., Sparholt, M. H., Christensen, A. F., Carvalho, V., Hartmann, B. & 18 others, Holst, Jens Juul, Rumessen, J. J., Linneberg, Allan René, Sicheritz-Pontén, T., Dalgaard, M. D., Blennow, Andreas, Frandsen, H. L., Villas-Bôas, S., Kristiansen, Karsten, drb459, drb459, Hansen, Torben, Ekstrøm, Claus Thorn, Ritz, C., Nielsen, H. B., Pedersen, Oluf Borbye, Gupta, R., Lauritzen, Lotte & Licht, T. R., Jan 2019, In: Gut. 68, 1, p. 83-93 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  121. Published

    The Effect of Lean-Seafood and Non-Seafood Diets on Fecal Metabolites and Gut Microbiome: Results from a Randomized Crossover Intervention Study

    Schmedes, M., Brejnrod, A. D., Aadland, E. K., Kiilerich, P., Kristiansen, Karsten, Jacques, H., Lavigne, C., Graff, I. E., Eng, Ø., Holthe, A., Mellgren, G., Young, J. F., Sundekilde, U. K., Liaset, B. & Bertram, H. C., 2019, In: Molecular Nutrition and Food Research. 63, 1, p. 1-8 1700976.

    Research output: Contribution to journalJournal articleResearchpeer-review

  122. Published

    Sequencing reveals protective and pathogenic effects on development of diabetes of rare GLIS3 variants

    Sun, J., Have, C. T., Hollensted, M., Grarup, Niels, Linneberg, Allan René, Pedersen, Oluf Borbye, Nielsen, J. S., Rungby, Jørgen, Christensen, C., Brandslund, I., Kristiansen, Karsten, Jun, W., Hansen, Torben & Gjesing, A. P., 2019, In: PLoS ONE. 14, 8, 10 p., e0220805.

    Research output: Contribution to journalJournal articleResearchpeer-review

  123. Published

    Panel-based NGS reveals disease-causing mutations in hearing loss patients using BGISEQ-500 platform

    Sun, Y., Yuan, J., Wu, L., Li, M., Cui, X., Yan, C., Du, L., Mao, L., Man, J., Li, W., Kristiansen, Karsten, Wu, X., Pan, W., Yang, Y. & Yang, Y., 2019, In: Medicine. 98, 12, p. 1-7 e14860.

    Research output: Contribution to journalJournal articleResearchpeer-review

  124. Published

    Efficient and unique cobarcoding of second-generation sequencing reads from long DNA molecules enabling cost-effective and accurate sequencing, haplotyping, and de novo assembly

    Wang, O., Chin, R., Cheng, X., Wu, M. K. Y., Mao, Q., Tang, J., Sun, Y., Anderson, E., Lam, H. K., Chen, D., Zhou, Y., Wang, L., Fan, F., Zou, Y., Xie, Y., Zhang, R. Y., Drmanac, S., Nguyen, D., Xu, C., Villarosa, C. & 19 others, Gablenz, S., Barua, N., Nguyen, S., Tian, W., Liu, J. S., Wang, J., Liu, X., Qi, X., CHEN, Ao, Wang, H., Dong, Y., Zhang, W., Alexeev, A., Yang, H., Wang, J., Kristiansen, Karsten, Xu, X., Drmanac, R. & Peters, B. A., 2019, In: Genome Research. 29, 5, p. 798-808

    Research output: Contribution to journalJournal articleResearchpeer-review

  125. Published

    Dietary Protein Sources Differentially Affect the Growth of Akkermansia muciniphila and Maintenance of the Gut Mucus Barrier in Mice

    Zhao, F., Zhou, G., Liu, X., Song, S., Xu, X., Hooiveld, G., Müller, M., Liu, L., Kristiansen, Karsten & Li, C., 2019, In: Molecular Nutrition & Food Research. 63, 23, 11 p., 1900589.

    Research output: Contribution to journalJournal articleResearchpeer-review

  126. Published

    Distinct gut metagenomics and metaproteomics signatures in prediabetics and treatment-naïve type 2 diabetics

    Zhong, H., Ren, H., Lu, Y., Fang, C., Hou, G., Yang, Z., Chen, B., Yang, F., Zhao, Y., Shi, Z., Zhou, B., Wu, J., Zou, H., Zi, J., Chen, J., Bao, X., Hu, Y., Gao, Y., Zhang, J., Xu, X. & 10 others, Hou, Y., Yang, H., Wang, J., Liu, S., Jia, H., Madsen, L., Brix, S., Kristiansen, Karsten, Liu, F. & Li, J., 2019, In: EBioMedicine. 47, p. 373-383 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  127. Published

    Impact of early events and lifestyle on the gut microbiota and metabolic phenotypes in young school-age children

    Zhong, H., Penders, J., Shi, Z., Ren, H., Cai, K., Fang, Chao, Ding, Q., Thijs, C., Blaak, E. E., Stehouwer, C. D. A., Xu, X., Yang, H., Wang, J., Wang, J., Jonkers, D. M. A. E., Masclee, A. A. M., Brix, S., Li, J., Arts, I. C. W. & Kristiansen, Karsten, 2019, In: Microbiome. 7, p. 1-14 2.

    Research output: Contribution to journalJournal articleResearchpeer-review

  128. Published

    Single-cell RNA-seq reveals distinct dynamic behavior of sex chromosomes during early human embryogenesis

    Zhou, Q., Wang, T., Leng, L., Zheng, W., Huang, J., Fang, F., Yang, L., Chen, F., Lin, G., Wang, W. & Kristiansen, Karsten, 2019, In: Molecular Reproduction and Development. 86, 7, p. 871-882

    Research output: Contribution to journalJournal articleResearchpeer-review

  129. Published

    1,520 reference genomes from cultivated human gut bacteria enable functional microbiome analyses

    Zou, Y., Xue, W., Luo, G., Deng, Z., Qin, P., Guo, R., Sun, H., Xia, Y., Liang, S., Dai, Y., Wan, D., Jiang, R., Su, L., Feng, Q., Jie, Z., Guo, T., Xia, Z., Liu, C., Yu, J., Lin, Y. & 11 others, Tang, S., Huo, G., Xu, X., Hou, Y., Liu, X., Wang, J., Yang, H., Kristiansen, Karsten, Li, J., Jia, H. & Xiao, L., 2019, In: Nature Biotechnology. 37, 2, p. 179-185

    Research output: Contribution to journalJournal articleResearchpeer-review

  130. 2018
  131. Published

    Aberrant intestinal microbiota in individuals with prediabetes

    Allin, K. H., Tremaroli, V., Caesar, R., Jensen, Benjamin Anderschou Holbech, Damgaard, Mads Vargas, Bahl, M. I., Licht, T. R., Hansen, T. H., Nielsen, T., Dantoft, T. M., Linneberg, Allan René, Jørgensen, T., drb459, drb459, Kristiansen, Karsten, Franks, P. W., IMI-DIRECT consortium, I. C., Hansen, Torben, Bäckhed, G. F. & Pedersen, Oluf Borbye, Apr 2018, In: Diabetologia. 61, 4, p. 810-820 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  132. Published

    Whole-genome sequencing of 175 Mongolians uncovers population-specific genetic architecture and gene flow throughout North and East Asia

    Bai, H., Guo, X., Narisu, N., Lan, T., Wu, Q., Xing, Y., Zhang, Y., Bond, S. R., Pei, Z., Zhang, Y., Zhang, D., Jirimutu, J., Zhang, D., Yang, X., Morigenbatu, M., Zhang, L., Ding, B., Guan, B., Cao, J., Lu, H. & 38 others, Liu, Y., Li, W., Dang, N., Jiang, M., Wang, S., Xu, H., Wang, D., Liu, C., Luo, X., Gao, Y., Li, X., Wu, Zongze, Yang, L., Meng, F., Ning, X., Hashenqimuge, H., Wu, K., Wang, B., Suyalatu, S., Liu, Y., Ye, C., Wu, H., Leppälä, K., Li, L., Fang, L., Chen, Y., Xu, W., Li, T., Liu, X., Xu, X., Gignoux, C. R., Yang, H., Brody, L. C., Wang, J., Kristiansen, Karsten, Burenbatu, B., Zhou, H. & Yin, Y., 2018, In: Nature Genetics. 50, 12, p. 1696-1704

    Research output: Contribution to journalJournal articleResearchpeer-review

  133. Published

    High intake of dairy during energy restriction does not affect energy balance or the intestinal microflora compared to low dairy intake in overweight individuals in a randomized controlled trial

    Bendtsen, L. Q., Blædel, T., Holm, J. B., Lorenzen, J. K., Mark, A. B., Kiilerich, P., Kristiansen, Karsten, Astrup, A. & Larsen, L. H., 2018, In: Applied Physiology, Nutrition and Metabolism. 43, 1, p. 1-10 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  134. Published

    Multi-cohort analysis of colorectal cancer metagenome identified altered bacteria across populations and universal bacterial markers

    Dai, Z., Coker, O. O., Nakatsu, G., Wu, W. K. K., Zhao, L., Chen, Z., Chan, F. K. L., Kristiansen, Karsten, Sung, J. J. Y., Wong, S. H. & Yu, J., 2018, In: Microbiome. 6, 12 p., 70.

    Research output: Contribution to journalJournal articleResearchpeer-review

  135. Published

    Age-dependent alterations of glucose clearance and homeostasis are temporally separated and modulated by dietary fat

    Damgaard, Mads Vargas, Pærregaard, S. I., Søgaard, I., Andersen, M. A., Paulson, J. N., Treebak, Jonas Thue, Sina, C., Holm, J. B., Kristiansen, Karsten & Jensen, Benjamin Anderschou Holbech, 2018, In: Journal of Nutritional Biochemistry. 54, p. 66-76 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  136. Published

    Effects of Frozen Storage on Phospholipid Content in Atlantic Cod Fillets and the Influence on Diet-Induced Obesity in Mice

    Fauske, K. R., Bernhard, A., Fjære, E., Myrmel, L. S., Frøyland, L., Kristiansen, Karsten, Liaset, B. & Madsen, L., 2018, In: Nutrients. 10, 6, 17 p., 695.

    Research output: Contribution to journalJournal articleResearchpeer-review

  137. Published

    A novel affordable reagent for room temperature storage and transport of fecal samples for metagenomic analyses

    Han, Mo, Hao, L., Lin, Y., Li, F., Wang, J., Yang, H., Xiao, L., Kristiansen, Karsten, Jia, H. & Li, J., 2018, In: Microbiome. 6, 7 p., 43.

    Research output: Contribution to journalJournal articleResearchpeer-review

  138. Published

    A low-gluten diet induces changes in the intestinal microbiome of healthy Danish adults

    Hansen, L. B. S., Roager, H. M., Søndertoft, N. B., Gøbel, R. J., Kristensen, M. B., Vallès-Colomer, M., Vieira-Silva, S., Ibrügger, S., Lind, M. V., Mærkedahl, R. B., Bahl, M. I., Madsen, M. L., Havelund, J., Falony, G., Tetens, I., Nielsen, T., Allin, K. H., Frandsen, H. L., Hartmann, B., Holst, J. J. & 32 others, Sparholt, M. H., Holck, J., Blennow, Andreas, Moll, J. M., Meyer, A. S., Hoppe, C., Poulsen, J. H., Carvalho, V., Sagnelli, D., Dalgaard, M. D., Christensen, A. F., Lydolph, M., Ross, A. B., Villas-Bôas, S. G., Brix, S., Sicheritz-Pontén, T., Buschard, K., Linneberg, Allan René, Rumessen, J. J., Ekstrøm, Claus Thorn, Ritz, C., Kristiansen, Karsten, Nielsen, H. B., drb459, drb459, Færgeman, N. J., Raes, J., Frøkiær, Hanne, Hansen, Torben, Lauritzen, Lotte, Gupta, R., Licht, T. R. & Pedersen, Oluf Borbye, 2018, In: Nature Communications. 9, 13 p., 4630.

    Research output: Contribution to journalJournal articleResearchpeer-review

  139. Published

    Efficacy and safety of faecal microbiota transplantation in patients with psoriatic arthritis: protocol for a 6-month, double-blind, randomised, placebo-controlled trial

    Kragsnæs, M. S., Kjeldsen, J., Horn, H. C., Munk, H. L., Pedersen, F. M., Holt, H. M., Pedersen, J. K., Holm, D. K., Glerup, H., Andersen, V., Fredberg, U., Kristiansen, Karsten, Christensen, R. & Ellingsen, T., 2018, In: BMJ Open. 8, 4, 15 p., e019231.

    Research output: Contribution to journalJournal articleResearchpeer-review

  140. Published

    Ibuprofen alters human testicular physiology to produce a state of compensated hypogonadism

    Kristensen, D. M., Desdoits-Lethimonier, C., Mackey, Abigail, Dalgaard, M. D., De Masi, F., Munkbøl, C. H., Styrishave, Bjarne, Antignac, J., Le Bizec, B., Platel, C., Hay-Schmidt, Anders, Jensen, T. K., Lesné, L., Mazaud-Guittot, S., Kristiansen, Karsten, Brunak, Søren, Kjær, Michael, Juul, Anders & Jégou, B., 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 4, p. e715-e724 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  141. Published

    The metagenome of the female upper reproductive tract

    Li, F., Chen, C., Wei, W., Wang, Z., Dai, J., Hao, L., Song, L., Zhang, X., Zeng, L., Du, H., Tang, H., Liu, N., Yang, H., Wang, J., Madsen, L., Brix, S., Kristiansen, K., Xu, X., Li, J., Wu, R. & 1 others, Jia, H., 2018, In: GigaScience. 7, 10, p. 1-8 giy107.

    Research output: Contribution to journalJournal articleResearchpeer-review

  142. Published

    Dissecting the expression landscape of mitochondrial genes in lung squamous cell carcinoma and lung adenocarcinoma

    Li, N., Zhao, J., Ma, Y., Roy, B., Liu, R., Kristiansen, Karsten & Gao, Q., 2018, In: Oncology Letters. 16, 3, p. 3992-4000

    Research output: Contribution to journalJournal articleResearchpeer-review

  143. Published

    Establishment of a Macaca fascicularis gut microbiome gene catalog and comparison with the human, pig, and mouse gut microbiomes

    Li, X., Liang, S., Xia, Z., Qu, J., Liu, H., Liu, C., Yang, H., Wang, J., Madsen, L., Hou, Y., Li, J., Jia, H., Kristiansen, Karsten & Xiao, L., 2018, In: GigaScience. 7, 9, p. 1-10 giy100.

    Research output: Contribution to journalJournal articleResearchpeer-review

  144. Published

    Applied Hologenomics: Feasibility and Potential in Aquaculture

    Limborg, Morten Tønsberg, Alberdi, Antton, Kodama, M., Roggenbuck, M., Kristiansen, Karsten & Gilbert, M Thomas P, 2018, In: Trends in Biotechnology. 36, 3, p. 252-264 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  145. Published

    Development and clinical validation of a circulating tumor DNA test for the identification of clinically actionable mutations in nonsmall cell lung cancer

    Liu, L., Liu, H., Shao, D., Liu, Z., Wang, J., Deng, Q., Tang, H., Yang, H., Zhang, Y., Qiu, Y., Cui, F., Tan, M., Zhang, P., Li, Z., Liu, J., Liang, W., Wang, Y., Peng, Z., Wang, J., Yang, H. & 4 others, Mao, M., Kristiansen, Karsten, Ye, M. & He, J., 2018, In: Genes, Chromosomes & Cancer. 57, 4, p. 211-220 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  146. Published

    Next generation sequencing-based molecular profiling of lung adenocarcinoma using pleural effusion specimens

    Liu, L., Shao, D., Deng, Q., Tang, H., Wang, J., Liu, J., Guo, F., Lin, Y., Peng, Z., Mao, M., Kristiansen, Karsten, Ye, M. & He, J., 1 May 2018, In: Journal of Thoracic Disease. 10, 5, p. 2631-2637

    Research output: Contribution to journalJournal articleResearchpeer-review

  147. Published

    Zinc finger and interferon-stimulated genes play a vital role in TB-IRIS following HAART in AIDS

    Ma, J., Zhao, F., Su, W., Li, Q., Li, J., Ji, J., Deng, Y., Zhou, Y., Wang, X., Yang, H., Saksena, N. K., Kristiansen, Karsten, Wang, H. & Liu, Y., 2018, In: Personalized Medicine. 15, 4, p. 251-269

    Research output: Contribution to journalJournal articleResearchpeer-review

  148. Published

    Dietary Proteins, Brown Fat, and Adiposity

    Madsen, L., Myrmel, L. S., Fjære, E., Oyen, J. & Kristiansen, Karsten, 2018, In: Frontiers in Physiology. 9, p. 1-13 1792.

    Research output: Contribution to journalReviewResearchpeer-review

  149. Published

    Benchmarking the HLA typing performance of Polysolver and Optitype in 50 Danish parental trios

    Matey-Hernandez, M. L., Danish Pan Genome Consortium, D. P. G. C., Brunak, Søren, Izarzugaza, J. M. G., Sørensen, L. M., Petersen, Bent, Sibbesen, Jonas Andreas, Liu, S., Belling, K. G., Have, C. T., Bork-Jensen, J., Sun, J., Hansen, Torben, Krogh, Anders, Sørensen, Thorkild I.A., Pedersen, Oluf Borbye, Wang, J., Eiberg, Hans Rudolf Lytchoff & Kristiansen, Karsten, 2018, In: BMC Bioinformatics. 19, p. 1-12 239.

    Research output: Contribution to journalJournal articleResearchpeer-review

  150. Published

    Meals based on cod or veal in combination with high or low glycemic index carbohydrates did not affect diet-induced thermogenesis, appetite sensations, or subsequent energy intake differently

    Nielsen, L. V., Nyby, S., Klingenberg, L., Juul-Hindsgaul, N., Rudnicki, R. C. J., Ritz, C., Liaset, B., Kristiansen, Karsten, Madsen, L. & Raben, Anne, 1 Nov 2018, In: Appetite. 130, p. 199-208 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  151. Published

    A gene catalogue of the Sprague-Dawley rat gut metagenome

    Pan, H., Guo, R., Zhu, J., Wang, Q., Ju, Y., Xie, Y., Zheng, Y., Wang, Z., Li, T., Liu, Z., Lu, L., Li, F., Tong, B., Xiao, L., Xu, X., Li, R., Yuan, Z., Yang, H., Wang, J., Kristiansen, K. & 2 others, Jia, H. & Liu, L., 2018, In: GigaScience. 7, 5, 8 p., giy055.

    Research output: Contribution to journalJournal articleResearchpeer-review

  152. Published

    MetaPGN: a pipeline for construction and graphical visualization of annotated pangenome networks

    Peng, Y., Tang, S., Wang, D., Zhong, H., Jia, H., Cai, X., Zhang, Z., Xiao, M., Yang, H., Wang, J., Kristiansen, Karsten, Xu, X. & Li, J., 2018, In: GigaScience. 7, 11, p. 1-11 giy121.

    Research output: Contribution to journalJournal articleResearchpeer-review

  153. Published

    CRISPR/Cascade 9-Mediated Genome Editing-Challenges and Opportunities

    Roy, B., Zhao, J., Yang, C., Luo, W., Xiong, T., Li, Y., Fang, X., Gao, G., Singh, C. O., Madsen, L., Zhou, Y. & Kristiansen, Karsten, 2018, In: Frontiers in Genetics. 9, 12 p., 240.

    Research output: Contribution to journalReviewResearchpeer-review

  154. Published

    Characterization of genomic clones using circulating tumor DNA in patients with hepatocarcinoma

    Sun, Y., Meng, R., Cheng, Z., Fan, C., Wei, X., Yang, Y., Wu, G., Kristiansen, Karsten & Xue, J., 2018, In: Translational Cancer Research. 7, 2, p. 321-329 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  155. Published

    Targeted next-generation sequencing as a comprehensive test for Mendelian diseases: a cohort diagnostic study

    Sun, Y., Man, J., Wan, Y., Pan, G., Du, L., Li, L., Yang, Y., Qiu, L., Gao, Q., Dan, H., Mao, L., Cheng, Z., Fan, C., Yu, J., Lin, M., Kristiansen, Karsten, Shen, Y. & Wei, X., 2018, In: Scientific Reports. 8, p. 1-9 11646.

    Research output: Contribution to journalJournal articleResearchpeer-review

  156. Published

    Comprehensive targeted super-deep next generation sequencing enhances differential diagnosis of solitary pulmonary nodules

    Ye, M., Li, S., Huang, W., Wang, C., Liu, L., Liu, J., Liu, J., Pan, H., Deng, Q., Tang, H., Jiang, L., Huang, W., Chen, X., Shao, D., Peng, Z., Wu, R., Zhong, J., Wang, Z., Zhang, X., Kristiansen, K. & 5 others, Wang, J., Yin, Y., Mao, M., He, J. & Liang, W., 2018, In: Journal of Thoracic Disease. 10, Suppl. 7, p. S820-S829 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  157. Published

    Impact of a 3-Months Vegetarian Diet on the Gut Microbiota and Immune Repertoire

    Zhang, C., Björkman, A., Cai, K., Liu, G., Wang, C., Li, Y., Xia, H., Sun, L., Kristiansen, Karsten, Wang, J., Han, J., Hammarström, L. & Pan-Hammarström, Q., 2018, In: Frontiers in Immunology. 9, 13 p., 908.

    Research output: Contribution to journalJournal articleResearchpeer-review

  158. 2017
  159. Published

    The microbiota continuum along the female reproductive tract and its relation to uterine-related diseases

    Chen, C., Song, X., Wei, W., Zhong, H., Dai, J., Lan, Z., Li, F., Yu, X., Feng, Q., Wang, Z., Xie, H., Chen, X., Zeng, C., Wen, B., Zeng, L., Du, H., Tang, H., Xu, C., Xia, Y., Xia, H. & 10 others, Yang, H., Wang, J., Wang, J., Madsen, L., Brix, S., Kristiansen, Karsten, Xu, X., Li, J., Wu, R. & Jia, H., 17 Oct 2017, In: Nature Communications. 8, 1, 11 p., 875.

    Research output: Contribution to journalJournal articleResearchpeer-review

  160. Published

    A safflower oil based high-fat/high-sucrose diet modulates the gut microbiota and liver phospholipid profiles associated with early glucose intolerance in the absence of tissue inflammation

    Danneskiold-Samsøe, Niels Banhos, Andersen, D., Radulescu, I. D., Hansen, Ann Normann, Brejnrod, A. D., Kragh, M., Madsen, T., Nielsen, C., Josefsen, K. E., Fretté, X., Fjære, E., Madsen, L., Hellgren, L. I., Brix, S. & Kristiansen, Karsten, May 2017, In: Molecular Nutrition & Food Research. 61, 5, 11 p., 1600528.

    Research output: Contribution to journalJournal articleResearchpeer-review

  161. Published

    Assessment of the cPAS-based BGISEQ-500 platform for metagenomic sequencing

    Fang, Chao, Zhong, H., Lin, Y., Chen, B., Han, Mo, Ren, H., Lu, H., Luber, J. M., Xia, M., Li, W., Stein, S., Xu, X., Zhang, W., Drmanac, R., Wang, J., Yang, H., Hammarström, L., Kostic, A. D., Kristiansen, Karsten & Li, J., 2017, In: GigaScience. 7, 3, p. 1-8 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  162. Published

    Induction of lipogenesis in white fat during cold exposure in mice: link to lean phenotype

    Flachs, P., Adamcova, K., Zouhar, P., Marques, C., Janovska, P., Viegas, I., Jones, J. G., Bardova, K., Svobodova, M., Hansikova, J., Kuda, O., Rossmeisl, M., Aune, U. L., Borkowska, A. G., Kristiansen, Karsten, Madsen, L. & Kopecky, J., Mar 2017, In: International Journal of Obesity. 41, 3, p. 372-380 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  163. Published

    Corrigendum: Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota

    Forslund, K., Hildebrand, F., Nielsen, T., Falony, G., Le Chatelier, E., Sunagawa, S., Prifti, E., Vieira-Silva, S., Gudmundsdottir, V., Pedersen, H. K., Arumugam, M., Kristiansen, K., Voigt, A. Y., Vestergaard, H., Hercog, R., Costea, P. I., Kultima, J. R., Li, J., Jørgensen, T., Levenez, F. & 10 others, Doré, J., Nielsen, H. B., Brunak, Søren, Raes, J., Hansen, Torben, Wang, J., Ehrlich, S. D., Bork, P., Pedersen, Oluf Borbye & MetaHIT consortium, M. C., 3 May 2017, In: Nature. 545, 116, 1 p., 22318.

    Research output: Contribution to journalComment/debateResearch

  164. Published

    Mammary alveolar epithelial cells convert to brown adipocytes in post-lactating mice

    Giordano, A., Perugini, J., Kristensen, D. M., Sartini, L., Frontini, A., Kajimura, S., Kristiansen, Karsten & Cinti, S., 2017, In: Journal of Cellular Physiology. 232, 11, p. 2923-2928 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  165. Published

    Analyses of gut microbiota and plasma bile acids enable stratification of patients for antidiabetic treatment

    Gu, Y., Wang, X., Li, J., Zhang, Y., Zhong, H., Liu, R., Zhang, D., Feng, Q., Xie, X., Hong, J., Ren, H., Liu, W., Ma, J., Su, Q., Zhang, H., Yang, J., Wang, X., Zhao, X., Gu, W., Bi, Y. & 11 others, Peng, Y., Xu, X., Xia, H., Li, F., Xu, X., Yang, H., Xu, G., Madsen, L., Kristiansen, Karsten, Ning, G. & Wang, W., 27 Nov 2017, In: Nature Communications. 8, 12 p., 1785.

    Research output: Contribution to journalJournal articleResearchpeer-review

  166. Published

    Prenatal exposure to paracetamol/acetaminophen and precursor aniline impairs masculinisation of male brain and behaviour

    Hay-Schmidt, Anders, Finkielman, O. T. E., Jensen, Benjamin Anderschou Holbech, Høgsbro, C. F., Holm, J. B., Johansen, K. H., Jensen, T. K., Andrade, A. M., Swan, S. H., Bornehag, C., Brunak, Søren, Jegou, B., Kristiansen, Karsten & Kristensen, D. M., 2017, In: Reproduction. 154, 2, p. 145-152 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  167. Published

    Two distinct metacommunities characterize the gut microbiota in Crohn's disease patients

    He, Q., Gao, Y., Jie, Z., Yu, X., Laursen, J. M., Xiao, L., Li, Y., Li, L., Zhang, F., Feng, Q., Li, X., Yu, J., Liu, C., Lan, P., Yan, T., Liu, X., Xu, X., Yang, H., Wang, J., Madsen, L. & 4 others, Brix, S., Wang, J. G., Kristiansen, Karsten & Jia, H., Jul 2017, In: GigaScience. 6, 7, p. 1–11 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  168. Published

    Dietary intake and adipose tissue content of long-chain n-3 PUFAs and subsequent 5-y change in body weight and waist circumference

    Jakobsen, M. U., Madsen, L., Skjøth, F., Berentzen, T. L., Halkjaer, J., Tjønneland, A., Schmidt, E. B., Sørensen, Thorkild I.A., Kristiansen, Karsten & Overvad, K., May 2017, In: The American Journal of Clinical Nutrition. 105, 5, p. 1148-1157 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  169. Published

    Assembly and analysis of 100 full MHC haplotypes from the Danish population

    Jensen, J. M., Villesen, P., Friborg, R. M., Mailund, T., Besenbacher, S., Sørensen, L. M., Petersen, B., Sibbesen, J. A., Liu, S., Skov, L., Belling, K. G., Have, C. T., Izarzugaza, J. M. G., Grosjean, M., Bork-Jensen, J., Grove, J., Als, T. D., Huang, S., Chang, Y., Xu, R. & 39 others, Ye, W., Rao, J., Guo, X., Sun, J., Cao, H., Ye, C., Beusekom, J. V., Espeseth, T., Flindt, E., Halager, A. E., Hellard, S. L., Hultman, C. M., Lescai, F., Li, S., Lund, O., Løngren, P., Matey-Hernandez, M. L., Mors, O., Pedersen, C. N. S., Sicheritz-Pontén, T., Sullivan, P., Syed, A., Westergaard, D., Yadav, R., Li, N., Xu, X., Hansen, Torben, Bolund, L., Krogh, Anders, Sørensen, Thorkild I.A., Pedersen, Oluf Borbye, Gupta, R., Rasmussen, Simon, Børglum, A. D., Wang, J., Eiberg, Hans Rudolf Lytchoff, Kristiansen, Karsten, Brunak, Søren & Schierup, M. H., Sep 2017, In: Genome Research. 27, 9, p. 1597-1607 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  170. Published

    The gut microbiome in atherosclerotic cardiovascular disease

    Jie, Z., Xia, H., Zhong, S-L., Feng, Q., Li, S., Liang, S., Zhong, H., Liu, Z., Gao, Y., Zhao, H., Zhang, D., Su, Z., Fang, Z., Lan, Z., Li, J., Xiao, L., Li, J., Li, R., Li, X., Li, F. & 22 others, Ren, H., Huang, Y., Peng, Y., Li, G., Wen, B., Dong, B., Chen, J., Geng, Q., Zhang, Z., Yang, H., Wang, J., Wang, J., Zhang, X., Madsen, L., Brix, S., Ning, G., Xu, X., Liu, X., Hou, Y., Jia, H., He, K. & Kristiansen, Karsten, 10 Oct 2017, In: Nature Communications. 8, 1, 12 p., 845.

    Research output: Contribution to journalJournal articleResearchpeer-review

  171. Published

    Taxonomic structure and functional association of foxtail millet root microbiome

    Jin, T., Wang, Y., Huang, Y., Xu, J., Zhang, P., Wang, N., Liu, X., Chu, H., Liu, G., Jiang, H., Li, Y., Xu, J., Kristiansen, K., Xiao, L., Zhang, Y., Zhang, G., Du, G., Zhang, H., Zou, H., Zhang, H. & 11 others, Jie, Z., Liang, S., Jia, H., Wan, J., Lin, D., Li, J., Fan, G., Yang, H., Wang, J., Bai, Y. & Xu, X., Oct 2017, In: GigaScience. 6, 10, p. 1-12 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  172. Published

    Increased microvascular permeability in mice lacking Epac1 (Rapgef3)

    Kopperud, R. K., Rygh, C. B., Karlsen, T. V., Krakstad, C., Kleppe, R., Hoivik, E. A., Bakke, M., Tenstad, O., Selheim, F., Lidén, Å., Madsen, L., Pavlin, T., Taxt, T., Kristiansen, Karsten, Curry, F. -. E., Reed, R. K. & Døskeland, S. O., Feb 2017, In: Acta Physiologica. 219, 2, p. 441-452 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  173. Published

    Comprehensive genomic profiling of lung cancer using a validated panel to explore therapeutic targets in East Asian patients

    Liu, L., Liu, J., Shao, D., Deng, Q., Tang, H., Liu, Z., Chen, X., Guo, F., Lin, Y., Mao, M., Kristiansen, Karsten, Ye, M. & He, J., Dec 2017, In: Cancer Science. 108, 12, p. 2487-2494 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  174. Published

    Gut microbiome and serum metabolome alterations in obesity and after weight-loss intervention

    Liu, R., Hong, J., Xu, X., Feng, Q., Zhang, D., Gu, Y., Shi, J., Zhao, S., Liu, W., Wang, X., Xia, H., Liu, Z., Cui, B., Liang, P., Xi, L., Jin, J., Ying, X., Wang, X., Zhao, X., Li, W. & 28 others, Jia, H., Lan, Z., Li, F., Wang, R., Sun, Y., Yang, M., Shen, Y., Jie, Z., Li, J., Chen, X., Zhong, H., Xie, H., Zhang, Y., Gu, W., Deng, X., Shen, B., Xu, X., Yang, H., Xu, G., Bi, Y., Lai, S., Wang, J., Qi, L., Madsen, L., Wang, J., Ning, G., Kristiansen, Karsten & Wang, W., Jul 2017, In: Nature Medicine. 23, 7, p. 859-868 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  175. Published

    Links between dietary protein sources, the gut microbiota, and obesity

    Madsen, L., Myrmel, L. S., Fjære, E., Liaset, B. & Kristiansen, Karsten, 19 Dec 2017, In: Frontiers in Physiology. 8, 12 p., 1047.

    Research output: Contribution to journalReviewResearchpeer-review

  176. Published

    Visualization and quantification of browning using a Ucp1-2A-Luciferase knock-in mouse model

    Mao, L., Nie, B., Nie, T., Hui, X., Gao, X., Lin, X., Liu, X., Xu, Y., Tang, X., Yuan, R., Li, K., Li, P., Ding, K., Wang, Y., Xu, A., Fei, J., Han, W., Liu, P., Madsen, L., Kristiansen, K. & 3 others, Zhou, Z., Ding, S. & Wu, D., Feb 2017, In: Diabetes. 66, 2, p. 407-417 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  177. Published

    Synthesis and biological evaluation of dihydropyrano-[2,3-c]pyrazoles as a new class of PPARγ partial agonists

    Qvortrup, K., Jensen, J. F., Sørensen, M. S., Kouskoumvekaki, I., Petersen, R. K., Taboureau, O., Kristiansen, Karsten & Nielsen, T. E., 28 Feb 2017, In: PLoS ONE. 12, 2, 19 p., e0162642.

    Research output: Contribution to journalJournal articleResearchpeer-review

  178. Published

    Analysis of 62 hybrid assembled human Y chromosomes exposes rapid structural changes and high rates of gene conversion

    Skov, L., Schierup, M. H., Danish Pan Genome Consortium, D. P. G. C., Sørensen, L. M., Petersen, Bent, Sibbesen, Jonas Andreas, Liu, S., Belling, K. G., Have, C. T., Bork-Jensen, J., Hansen, Torben, Krogh, Anders, Sørensen, Thorkild I.A., Pedersen, Oluf Borbye, Rasmussen, Simon, Kristiansen, Karsten & Brunak, Søren, 2017, In: PLOS Genetics. 13, 8, p. e1006834

    Research output: Contribution to journalJournal articleResearchpeer-review

  179. Published

    Obesity is associated with depot-specific alterations in adipocyte DNA methylation and gene expression

    Sonne, Si Brask, Yadav, R., Yin, G., Dalgaard, M. D., Myrmel, L. S., Gupta, R., Wang, J., Madsen, L., Kajimura, S. & Kristiansen, Karsten, 2017, In: Adipocyte. 6, 2, p. 124-133 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  180. Published

    Acute infection with the intestinal parasite Trichuris muris has long-term consequences on mucosal mast cell homeostasis and epithelial integrity

    Sorobetea, D., Holm, J. B., Henningsson, H., Kristiansen, Karsten & Svensson-Frej, M., Feb 2017, In: European Journal of Immunology. 47, 2, p. 257-268 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  181. Published

    Eosinophilic airway inflammation in asthmatic patients is associated with an altered airway microbiome

    Sverrild, Asger, Kiilerich, P., Brejnrod, A. D., Pedersen, R., Porsbjerg, Celeste Michala, Bergqvist, A., Erjefält, J. S., Kristiansen, Karsten & Backer, Vibeke, Aug 2017, In: Journal of Allergy and Clinical Immunology. 140, 2, p. 407-417 e11.

    Research output: Contribution to journalJournal articleResearchpeer-review

  182. Published

    Sequencing and de novo assembly of 150 genomes from Denmark as a population reference

    Sørensen, L. M., Jensen, J. M., Petersen, B., Sibbesen, J. A., Liu, S., Villesen, P., Skov, L., Belling, K. G., Have, C. T., Izarzugaza, J. M. G., Grosjean, M., Bork-Jensen, J., Grove, J., Als, T. D., Huang, S., Chang, Y., Xu, R., Ye, W., Rao, J., Guo, X. & 39 others, Sun, J., Cao, H., Ye, C., van Beusekom, J., Espeseth, T., Flindt, E., Friborg, R. M., Halager, A. E., Le Hellard, S., Hultman, C. M., Lescai, F., Li, S., Lund, O., Løngren, P., Mailund, T., Matey-Hernandez, M. L., Mors, O., Pedersen, C. N. S., Sicheritz-Pontén, T., Sullivan, P., Syed, A., Westergaard, David, Yadav, R., Li, N., Xu, X., Hansen, Torben, Krogh, Anders, Bolund, L., Sørensen, Thorkild I.A., Pedersen, Oluf Borbye, Gupta, R., Rasmussen, Simon, Besenbacher, S., Børglum, A. D., Wang, J., Eiberg, Hans Rudolf Lytchoff, Kristiansen, Karsten, Brunak, Søren & Schierup, M. H., 2017, In: Nature. 548, 7665, p. 87-91 5 p.

    Research output: Contribution to journalLetterResearchpeer-review

  183. Published

    High-fat feeding rather than obesity drives taxonomical and functional changes in the gut microbiota in mice

    Xiao, L., Sonne, S. B., Feng, Q., Chen, N., Xia, Z., Li, X., Fang, Z., Zhang, D., Fjære, E., Midtbø, L. K., Derrien, M., Hugenholtz, F., Tang, L., Li, J., Zhang, J., Liu, C., Hao, Q., Vogel, U. B., Mortensen, A., Kleerebezem, M. & 8 others, Licht, T. R., Yang, H., Wang, J., Li, Y., Arumugam, Mani, Wang, J., Madsen, L. & Kristiansen, Karsten, 8 Apr 2017, In: Microbiome. 5, 12 p., 43.

    Research output: Contribution to journalJournal articleResearchpeer-review

  184. Published

    An esophageal squamous cell carcinoma classification system that reveals potential targets for therapy

    Xiong, T., Wang, M., Zhao, J., Liu, Q., Yang, C., Luo, W., Li, X., Yang, H., Kristiansen, Karsten, Roy, B. & Zhou, Y., 25 Jul 2017, In: OncoTarget. 8, 30, p. 49851-49860 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  185. Published

    Metagenomic analysis of faecal microbiome as a tool towards targeted non-invasive biomarkers for colorectal cancer

    Yu, J., Feng, Q., Wong, S. H., Zhang, D., Liang, Q. Y., Qin, Y., Tang, L., Zhao, H., Stenvang, J., Li, Y., Wang, X., Xu, X., Chen, N., Wu, W. K. K., Al-Aama, J., Nielsen, H. J., Kiilerich, P., Jensen, B. A. H., Yau, T. O., Lan, Z. & 19 others, Jia, H., Li, J., Xiao, L., Lam, T. Y. T., Ng, S. C., Cheng, A. S., Wong, V. W., Chan, F. K. L., Xu, X., Yang, H., Madsen, L., Datz, C., Tilg, H., Wang, J., Brünner, N., Kristiansen, Karsten, Arumugam, Mani, Sung, J. J. & Wang, J., 2017, In: Gut. 66, p. 70-78 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  186. Published

    Effects of Gliadin consumption on the Intestinal Microbiota and Metabolic Homeostasis in Mice Fed a High-fat Diet

    Zhang, L., Andersen, D., Roager, Henrik Munch, Bahl, M. I., Hansen, Camilla Hartmann Friis, Danneskiold-Samsøe, Niels Banhos, Kristiansen, Karsten, Radulescu, I. D., Sina, C., Frandsen, H. L., Hansen, Axel Kornerup, Brix, S., Hellgren, L. I. & Licht, T. R., 16 Mar 2017, In: Scientific Reports. 7, 13 p., 44613.

    Research output: Contribution to journalJournal articleResearchpeer-review

  187. Published

    Lipidomic profiling reveals distinct differences in plasma lipid composition in healthy, prediabetic, and type 2 diabetic individuals

    Zhong, H., Fang, C., Fan, Y., Lu, Y., Wen, B., Ren, H., Hou, G., Yang, F., Xie, H., Jie, Z., Peng, Y., Ye, Z., Wu, J., Zi, J., Zhao, G., Chen, J., Bao, X., Hu, Y., Gao, Y., Zhang, J. & 7 others, Yang, H., Wang, J., Madsen, L., Kristiansen, Karsten, Ni, C., Li, J. & Liu, S., Jul 2017, In: GigaScience. 6, 7, p. 1-12 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  188. 2016
  189. Published

    Depletion of regulatory T cells leads to an exacerbation of delayedtype hypersensitivity arthritis in C57BL/6 mice that can be counteracted by IL-17 blockade

    Atkinson, S. M., Hoffmann, U., Bach, E., Danneskiold-Samsøe, Niels Banhos, Kristiansen, Karsten, Serikawa, K., Fox, B., Kruse, K., Haase, C., Skov, Søren & Nansen, A., 2016, In: Disease Models & Mechanisms. 9, p. 427-440 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  190. Published

    Intake of a Western diet containing cod instead of pork alters fatty acid composition in tissue phospholipids and attenuates obesity and hepatic lipid accumulation in mice

    Aune, U. L., Fauske, K. R., Kuda, O., Fjære, E., Myrmel, L. S., Norberg, N., Frøyland, L., Graff, I. E., Liaset, B., Kristiansen, Karsten, Kopecky, J. & Madsen, L., Jul 2016, In: Journal of Nutritional Biochemistry. 33, p. 119-127 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  191. Published

    The protein source determines the potential of high protein diets to attenuate obesity development in C57BL/6J mice

    Aune, U. L., Myrmel, L. S., Fjære, E., Rønnevik, A. K., Bjelland, S., Fauske, K. R., Holm, J. B., Basse, A. L., Hansen, Jacob B., Liaset, B., Kristiansen, Karsten & Madsen, L., 2016, In: Adipocytes. 5, 2, p. 196-211 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  192. Published

    Marine fatty acids aggravate hepatotoxicity of α-HBCD in juvenile female BALB/c mice

    Bernhard, A., Berntssen, M. H. G., Lundebye, A., Alvheim, A. R., Myrmel, L. S., Fjære, E., Torstensen, B. E., Kristiansen, Karsten, Madsen, L., Brattelid, T. & Rasinger, J. D., 2016, In: Food and Chemical Toxicology. 97, p. 411-423 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  193. Published

    A randomised, controlled, crossover study of the effect of diet on angiopoietin-like protein 4 (ANGPTL4) through modification of the gut microbiome

    Blædel, T., Holm, J. B., Sundekilde, U. K., Schmedes, M. S., Hess, A. L., Lorenzen, J. K., Kristiansen, Karsten, Dalsgaard, T. K., Astrup, A. & Larsen, L. H., 2016, In: Journal of Nutritional Science. 5, 10 p., e45.

    Research output: Contribution to journalJournal articleResearchpeer-review

  194. Published

    Design and synthesis of novel Y-shaped barbituric acid derivatives as PPARγ activators

    Dixit, V. A., Rathi, P. C., Bhagat, S., Gohlke, H., Petersen, R. K., Kristiansen, Karsten, Chakraborti, A. K. & Bharatam, P. V., 2016, In: European Journal of Medicinal Chemistry. 108, p. 423-435 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  195. Published

    Long-term consumption of an obesogenic high fat diet prior to ischemia-reperfusion mediates cardioprotection via Epac1-dependent signaling

    Edland, F., Wergeland, A., Kopperud, R., Åsrud, K. S., Hoivik, E. A., Witsø, S. L., Æsøy, R., Madsen, L., Kristiansen, Karsten, Bakke, M., Døskeland, S. O. & Jonassen, A. K., 2016, In: Nutrition & Metabolism. 13, 11 p., 87.

    Research output: Contribution to journalJournal articleResearchpeer-review

  196. Published

    Integrated metabolomics and metagenomics analysis of plasma and urine identified microbial metabolites associated with coronary heart disease

    Feng, Q., Liu, Z., Zhong, S., Li, R., Xia, H., Jie, Z., Wen, B., Chen, X., Yan, W., Fan, Y., Guo, Z., Meng, N., Chen, J., Yu, X., Zhang, Z., Kristiansen, Karsten, Wang, J., Xu, X., He, K. & Li, G., 2016, In: Scientific Reports. 6, 14 p., 22525 .

    Research output: Contribution to journalJournal articleResearchpeer-review

  197. Published

    MDM2 facilitates adipocyte differentiation through CRTC-mediated activation of STAT3

    Hallenborg, P., Siersbæk, M., Barrio-Hernandez, I., Nielsen, R., Kristiansen, Karsten, Mandrup, S., Grøntved, L. & Blagoev, B., 2016, In: Cell Death & Disease. 7, 12 p., e2289.

    Research output: Contribution to journalJournal articleResearchpeer-review

  198. Published

    The elusive endogenous adipogenic PPARγ agonists: lining up the suspects

    Hallenborg, P., Petersen, R. K., Kouskoumvekaki, I., Newman, J. W., Madsen, L. & Kristiansen, Karsten, 2016, In: Progress in Lipid Research. 61, p. 149-162 14 p.

    Research output: Contribution to journalReviewResearchpeer-review

  199. Published

    p53 regulates expression of uncoupling protein 1 through binding and repression of PPARγ coactivator-1α

    Hallenborg, P., Fjære, E., Liaset, B., Petersen, R. K., Murano, I., Sonne, Si Brask, Falkerslev, M., Winther, Sally, Jensen, Benjamin Anderschou Holbech, Ma, Tao, Hansen, Jacob B., Cinti, S., Blagoev, B., Madsen, L. & Kristiansen, Karsten, 2016, In: American Journal of Physiology: Endocrinology and Metabolism. 310, 2, p. E116-128 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  200. Published

    Diet-induced obesity, energy metabolism and gut microbiota in C57BL/6J mice fed Western diets based on lean seafood or lean meat mixtures

    Holm, J. B., Rønnevik, A. K., Tastesen, H. S., Fjære, E., Fauske, K. R., Aune, U. L., Madsen, L., Kristiansen, Karsten & Liaset, B., May 2016, In: The Journal of Nutritional Biochemistry. 31, p. 127-136 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  201. Published

    Intrauterine exposure to paracetamol and aniline impairs female reproductive development by reducing follicle reserves and fertility

    Holm, J. B., Mazaud-Guittot, S., Danneskiold-Samsøe, Niels Banhos, Chalmey, C., Jensen, Benjamin Anderschou Holbech, Nørregård, M. M., Hansen, C. H., Styrishave, Bjarne, Svingen, T., Vinggaard, A. M., Koch, H. M., Bowles, J., Koopman, P., Jégou, B., Kristiansen, Karsten & Kristensen, D. M., 2016, In: Toxicological Sciences. 150, 1, p. 178-189 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  202. Published

    Dietary fat drives whole-body insulin resistance and promotes intestinal inflammation independent of body weight gain

    Jensen, Benjamin Anderschou Holbech, Nielsen, Thomas Svava, Fritzen, Andreas Mæchel, Holm, J. B., Fjære, E., Serup, A. K. L., Borkowski, K., Risis, S., Pærregaard, S. I., Søgaard, I., Poupeau, A. A. G., Poulsen, M., Ma, Tao, Sina, C., Kiens, Bente, Madsen, L., Kristiansen, Karsten & Treebak, Jonas Thue, 2016, In: Metabolism. 65, 12, p. 1706-1719 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  203. Published

    Effect of a long-term high-protein diet on survival, obesity development, and gut microbiota in mice

    Kiilerich, P., Myrmel, L. S., Fjære, E., Hao, Q., Hugenholtz, F., Sonne, S. B., Derrien, M., Pedersen, L. M., Petersen, R. K., Mortensen, A., Licht, T. R., Rømer, M. U. K., Vogel, U. B., Waagbo, L. J., Giallourou, N., Feng, Q., Xiao, L., Liu, C., Liaset, B., Kleerebezem, M. & 3 others, Wang, J., Madsen, L. & Kristiansen, Karsten, 2016, In: American Journal of Physiology: Endocrinology and Metabolism. 310, 11, p. E886-E899 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  204. Published

    The Mouse Intestinal Bacterial Collection (miBC) provides host-specific insight into cultured diversity and functional potential of the gut microbiota

    Lagkouvardos, I., Pukall, R., Abt, B., Foesel, B. U., Meier-Kolthoff, J. P., Kumar, N., Bresciani, A., Martínez, I., Just, S., Ziegler, C., Brugiroux, S., Garzetti, D., Wenning, M., Bui, T. P. N., Wang, J., Hugenholtz, F., Plugge, C. M., Peterson, D. A., Hornef, M. W., Baines, J. F. & 8 others, Smidt, H., Walter, J., Kristiansen, Karsten, Nielsen, H. B., Haller, D., Overmann, J., Stecher, B. & Clavel, T., 2016, In: Nature Microbiology. 1, 15 p., 16131.

    Research output: Contribution to journalJournal articleResearchpeer-review

  205. Published

    Novel Y-chromosomal microdeletions associated with non-obstructive azoospermia uncovered by high throughput sequencing of sequence-tagged sites (STSs)

    Liu, X., Li, Z., Su, Z., Zhang, J., Li, H., Xie, J., Xu, H., Jiang, T., Luo, L., Zhang, R., Zeng, X., Xu, H., Huang, Y., Mou, L., Hu, J., Qian, W., Zeng, Y., Zhang, X., Xiong, C., Yang, H. & 4 others, Kristiansen, Karsten, Cai, Z., Wang, J. & Gui, Y., 2016, In: Scientific Reports. 6, 12 p., 21831 .

    Research output: Contribution to journalJournal articleResearchpeer-review

  206. Published

    Systematic comparative evaluation of methods for investigating the TCRβ repertoire

    Liu, X., Zhang, W., Zeng, X., Zhang, R., Du, Y., Hong, X., Cao, H., Su, Z., Wang, C., Wu, J., Nie, C., Xu, X. & Kristiansen, Karsten, 2016, In: P L o S One. 11, 3, 18 p., e0152464.

    Research output: Contribution to journalJournal articleResearchpeer-review

  207. Published

    IRF8 transcription-factor-dependent classical dendritic cells are essential for intestinal T cell homeostasis

    Luda, K. M., Joeris, T., Persson, E. K., Rivollier, A. M. C., Demiri, M., Sitnik, K. M., Pool, L., Holm, J. B., Melo-Gonzalez, F., Richter, L., Lambrecht, B. N., Kristiansen, Karsten, Travis, M. A., Svensson-Frej, M., Kotarsky, K. & Agace, W. W., 2016, In: Immunity. 44, 4, p. 860-874 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  208. Published

    Macronutrient composition determines accumulation of persistent organic pollutants from dietary exposure in adipose tissue of mice

    Myrmel, L. S., Fjære, E., Midtbø, L. K., Bernhard, A., Petersen, R. K., Sonne, Si Brask, Mortensen, A., Hao, Q., Brattelid, T., Liaset, B., Kristiansen, Karsten & Madsen, L., 2016, In: Journal of Nutritional Biochemistry. 27, p. 307-316 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  209. Published

    Human gut microbes impact host serum metabolome and insulin sensitivity

    Pedersen, H. K., Gudmundsdottir, V., Nielsen, H. B., Hyotylainen, T., Nielsen, T., Jensen, B. A. H., Forslund, K., Hildebrand, F., Prifti, E., Falony, G., Le Chatelier, E., Levenez, F., Doré, J., Mattila, I., Plichta, D. R., Pöhö, P., Hellgren, L. I., Arumugam, M., Sunagawa, S., Vieira-Silva, S. & 14 others, Jørgensen, T., Holm, J. B., Trošt, K., Kristiansen, Karsten, Brix, Susanne, Raes, J., Wang, J., Hansen, Torben, Bork, P., Brunak, Søren, Oresic, M., Ehrlich, S. D., Pedersen, Oluf Borbye & MetaHIT Consortium, M. C., 2016, In: Nature. 535, 7612, p. 376-381 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  210. Published

    FFAR4 (GPR120) signaling is not required for anti-inflammatory and insulin-sensitizing effects of omega-3 fatty acids

    Pærregaard, S. I., Andersen, M. A., Serup, A. K. L., Ma, Tao, Kiens, Bente, Madsen, L., Kristiansen, Karsten & Jensen, Benjamin Anderschou Holbech, 2016, In: Mediators of Inflammation. 2016, 12 p., 1536047.

    Research output: Contribution to journalJournal articleResearchpeer-review

  211. Published

    Importance of the fat content within the cheese-matrix for blood lipid profile, faecal fat excretion, and gut microbiome in growing pigs

    Thorning, T. K., Raben, Anne, Bendsen, N. T., Jørgensen, H. J. H., Kiilerich, P., Ardö, Ylva Margareta, Lorenzen, J. K., Kristiansen, Karsten & Astrup, A., 2016, In: International Dairy Journal. 61, p. 67-75 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  212. Published

    A reference gene catalogue of the pig gut microbiome

    Xiao, L., Estellé, J., Kiilerich, P., Ramayo-Caldas, Y., Xia, Z., Feng, Q., Liang, S., Pedersen, A. Ø., Kjeldsen, N. J., Liu, C., Maguin, E., Doré, J., Pons, N., Le Chatelier, E., Prifti, E., Li, J., Jia, H., Liu, X., Xu, X., Ehrlich, S. D. & 4 others, Madsen, L., Kristiansen, Karsten, Rogel-Gaillard, C. & Wang, J., 2016, In: Nature Microbiology. 1, 6 p., 16161.

    Research output: Contribution to journalLetterResearchpeer-review

  213. Published

    Shotgun metagenomics of 250 adult twins reveals genetic and environmental impacts on the gut microbiome

    Xie, H., Guo, R., Zhong, H., Feng, Q., Lan, Z., Qin, B., Ward, K. J., Jackson, M. A., Xia, Y., Chen, X., Chen, B., Xia, H., Xu, C., Li, F., Xu, X., Al-Aama, J. Y., Yang, H., Wang, J., Kristiansen, K., Wang, J. & 5 others, Steves, C. J., Bell, J. T., Li, J., Spector, T. D. & Jia, H., 2016, In: Cell Systems. 3, 6, p. 572-584.e3 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  214. 2015
  215. Published

    Global gene expression profiling of brown to white adipose tissue transformation in sheep reveals novel transcriptional components linked to adipose remodeling

    Basse, A. L., Dixen, K., Yadav, R., Tygesen, M. P., Qvortrup, Klaus, Kristiansen, Karsten, Quistorff, B., Gupta, R., Wang, J. & Hansen, Jacob B., 2015, In: BMC Genomics. 16, 19 p., 215.

    Research output: Contribution to journalJournal articleResearchpeer-review

  216. Published

    Novel variation and de novo mutation rates in population-wide de novo assembled Danish trios

    Besenbacher, S., Liu, S., Gonzalez-Izarzugaza, J. M., Grove, J., Belling, K. G., Bork-Jensen, J., Huang, S., Als, T. D., Li, S., Yadav, R., Rubio García, A., Lescai, F., Demontis, D., Rao, J., Ye, W., Mailund, T., Møllegaard Friborg, R., Pedersen, C. N. S., Xu, R., Sun, J. & 27 others, Liu, H., Wang, O., Cheng, X., Flores, D., Rydza, E. K., Rapacki, K., Sørensen, J. D., Chmura, P. J., Westergaard, David, Dworzynski, P., Sørensen, Thorkild I.A., Lund, O., Hansen, Torben, Xu, X., Li, N., Bolund, L., Pedersen, Oluf Borbye, Eiberg, Hans Rudolf Lytchoff, Krogh, Anders, Børglum, A. D., Brunak, Søren, Kristiansen, Karsten, Schierup, M. H., Wang, J., Gupta, R., Villesen, P. & Rasmussen, Simon, 2015, In: Nature Communications. 6, 9 p., 5969.

    Research output: Contribution to journalJournal articleResearchpeer-review

  217. Published

    Dynamics and stabilization of the human gut microbiome during the first year of life

    Bäckhed, G. F., Roswall, J., Peng, Y., Feng, Q., Jia, H., Kovatcheva-Datchary, P., Li, Y., Xia, Y., Xie, H., Zhong, H., Khan, M. T., Zhang, J., Li, J., Xiao, L., Al-Aama, J., Zhang, D., Lee, Y. S., Kotowska, D. E., Colding, C. S., Tremaroli, V. & 7 others, Yin, Y., Bergman, S., Xu, X., Madsen, L., Kristiansen, Karsten, Dahlgren, J. & Wang, J., 2015, In: Cell Host & Microbe. 17, 5, p. 690-703 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  218. Published

    De novo assembly of a haplotype-resolved human genome

    Cao, H., Wu, H., Luo, R., Huang, S., Sun, Y., Tong, X., Xie, Y., Liu, B., Yang, H., Zheng, H., Li, J., Li, B., Wang, Y., Yang, F., Sun, P., Liu, S., Gao, P., Huang, H., Sun, J., Chen, D. & 21 others, He, G., Huang, W., Huang, Z., Li, Y., Tellier, L. C. A. M., Liu, X., Feng, Q., Xu, X., Zhang, X., Bolund, L., Krogh, Anders, Kristiansen, Karsten, Drmanac, R., Drmanac, S., Nielsen, R., Li, S., Wang, J., Yang, H., Li, Y., Wong, G. K. & Wang, J., 2015, In: Nature Biotechnology. 33, 6, p. 617-626 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  219. Published

    Intake of hydrolyzed casein is associated with reduced dody fat accretion and enhanced phase II metabolism in obesity prone C57BL/6J mice

    Clausen, M. R., Zhang, X., Yde, C. C., Ditlev, D. B., Lillefosse, H. H., Madsen, L., Kristiansen, Karsten, Liaset, B. & Bertram, H. C., 2015, In: P L o S One. 10, 3, 18 p., e0118895.

    Research output: Contribution to journalJournal articleResearchpeer-review

  220. Published

    Polyacetylenes from carrots (Daucus carota) improve glucose uptake in vitro in adipocytes and myotubes

    El-Houri, R. B., Kotowska, D. E., Christensen, K. B., Bhattacharya, S., Oksbjerg, N., Wolber, G., Kristiansen, Karsten & Christensen, L. P., 2015, In: Food & Function. 6, 7, p. 2135-2144 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  221. Published

    Gut microbiome development along the colorectal adenoma-carcinoma sequence

    Feng, Q., Liang, S., Jia, H., Stadlmayr, A., Tang, L., Lan, Z., Zhang, D., Xia, H., Xu, X., Jie, Z., Su, L., Li, X., Li, X., Li, J., Xiao, L., Huber-Schönauer, U., Niederseer, D., Xu, X., Al-Aama, J. Y., Yang, H. & 6 others, Wang, J., Kristiansen, Karsten, Arumugam, Mani, Tilg, H., Datz, C. & Wang, J., 2015, In: Nature Communications. 6, 13 p., 6528.

    Research output: Contribution to journalJournal articleResearchpeer-review

  222. Published

    Tissue inhibitor of matrix metalloproteinase-1 is required for high-fat diet-induced glucose intolerance and hepatic steatosis in mice

    Fjære, E., Andersen, C., Myrmel, L. S., Petersen, R. K., Hansen, J. B., Tastesen, H. S., Mandrup-Poulsen, Thomas, Brünner, N., Kristiansen, Karsten, Madsen, L. & Rømer, M. U. K., 2015, In: PloS one. 10, 7, 19 p., e0132910.

    Research output: Contribution to journalJournal articleResearchpeer-review

  223. Published

    Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota

    Forslund, K., Hildebrand, F., Nielsen, T., Falony, G., Le Chatelier, E., Sunagawa, S., Prifti, E., Vieira-Silva, S., Gudmundsdottir, V., Pedersen, H. K., Arumugam, M., Kristiansen, K., Yvonne Voigt, A., Vestergaard, H., Hercog, R., Igor Costea, P., Roat Kultima, J., Li, J., Jørgensen, T., Levenez, F. & 9 others, Dore, J., Nielsen, H. B., Brunak, Søren, Raes, J., Hansen, Torben, Wang, J., Dusko Ehrlich, S., Bork, P. & Pedersen, Oluf Borbye, 2015, In: Nature. 528, 7581, p. 262-266 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  224. Published

    Transcriptome profiling of brown adipose tissue during cold exposure reveals extensive regulation of glucose metabolism

    Hao, Q., Yadav, R., Basse, A. L., Petersen, S., Sonne, Si Brask, Rasmussen, Simon, Zhu, Q., Lu, Z., Wang, J., Audouze, K., Gupta, R., Madsen, L., Kristiansen, Karsten & Hansen, Jacob B., 2015, In: American Journal of Physiology: Endocrinology and Metabolism. 308, 5, p. E380-E392 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  225. Published

    Aniline is rapidly converted into Paracetamol impairing male reproductive development

    Holm, J. B., Chalmey, C., Modick, H., Jensen, L. S., Dierkes, G., Weiss, T., Jensen, Benjamin Anderschou Holbech, Nørregard, M. M., Borkowski, K., Styrishave, Bjarne, Koch, H. M., Mazaud-Guittot, S., Jegou, B., Kristiansen, Karsten & Kristensen, D. M., 2015, In: Toxicological Sciences. 148, 1, p. 288-298 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  226. Published

    Chronic Trichuris muris infection decreases diversity of the intestinal microbiota and concomitantly increases the abundance of lactobacilli

    Holm, J. B., Sorobetea, D., Kiilerich, P., Ramayo-Caldas, Y., Estellé, J., Ma, Tao, Madsen, L., Kristiansen, Karsten & Svensson-Frej, M., 2015, In: PLOS ONE. 10, 5, 22 p., e0125495.

    Research output: Contribution to journalJournal articleResearchpeer-review

  227. Published

    Dietary n-6 PUFA, carbohydrate: protein ratio and change in body weight and waist circumference: a follow-up study

    Jakobsen, M. U., Madsen, L., Dethlefsen, C., Due, K. M., Halkjaer, J., Sørensen, Thorkild I.A., Kristiansen, Karsten & Overvad, K., 2015, In: Public Health Nutrition. 18, 07, p. 1317-1323 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  228. Published

    In vitro screening of inhibition of PPAR-γ activity as a first step in identification of potential breast carcinogens

    Kopp, T. I., Lundqvist, J., Petersen, R. K., Oskarsson, A., Kristiansen, Karsten, Nellemann, C. & Vogel, U., 2015, In: Human & Experimental Toxicology. 34, 11, p. 1106-1118 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  229. Published

    Intake of farmed Atlantic salmon fed soybean oil increases hepatic levels of arachidonic acid-derived oxylipins and ceramides in mice

    Midtbø, L. K., Borkowska, A. G., Bernhard, A., Rønnevik, A. K., Lock, E., Fitzgerald, M. L., Torstensen, B. E., Liaset, B., Brattelid, T., Pedersen, T. L., Newman, J. W., Kristiansen, Karsten & Madsen, L., 2015, In: Journal of Nutritional Biochemistry. 26, 6, p. 585-595 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  230. Published

    Medium chain fatty acids from milk induce angiopoietin-like 4 (ANGPTL4) gene expression

    Nielsen, S. D., Amer, B., Young, J. F., Mortensen, G., Petersen, R. K., Kristiansen, Karsten & Dalsgaard, T. K., 2015, In: International Dairy Journal. 42, p. 34-41 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  231. Published

    Full-length single-cell RNA-seq applied to a viral human cancer: applications to HPV expression and splicing analysis in HeLa S3 cells

    Wu, L., Zhang, X., Zhao, Z., Wang, L., Li, B., Li, G., Dean, M., Yu, Q., Wang, Y., Lin, X., Rao, W., Mei, Z., Li, Y., Jiang, R., Yang, H., Li, F., Xie, G., Xu, L., Wu, K., Zhang, J. & 9 others, Chen, J., Wang, T., Kristiansen, Karsten, Zhang, X., Li, Y., Yang, H., Wang, J., Hou, Y. & Xu, X., 2015, In: GigaScience. 4, 17 p., 51.

    Research output: Contribution to journalJournal articleResearchpeer-review

  232. Published

    A catalog of the mouse gut metagenome: [incl. Author Correction]

    Xiao, L., Feng, Q., Liang, S., Sonne, S. B., Xia, Z., Qiu, X., Li, X., Long, H., Zhang, J., Zhang, D., Liu, C., Fang, Z., Chou, J., Glanville, J., Hao, Q., Kotowska, D. E., Colding, C. S., Licht, T. R., Wu, D., Yu, J. & 17 others, Sung, J. J. Y., Liang, Q., Li, J., Jia, H., Lan, Z., Tremaroli, V., Dworzynski, P., Nielsen, H. B., Bäckhed, G. F., Dore, J., Le Chatelier, E., Ehrlich, S. D., Lin, J. C., Arumugam, Mani, Wang, J., Madsen, L. & Kristiansen, Karsten, 2015, In: Nature Biotechnology. 33, 10, p. 1103-1108 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  233. Published

    MicroRNA-455 regulates brown adipogenesis via a novel HIF1an-AMPK-PGC1α signaling network

    Zhang, H., Guan, M., Townsend, K. L., Huang, T. L., An, D., Yan, X., Xue, R., Schulz, T. J., Winnay, J., Mori, M., Hirshman, M. F., Kristiansen, Karsten, Tsang, J. S., White, A. P., Cypess, A. M., Goodyear, L. J. & Tseng, Y., 2015, In: E M B O Reports. 16, 10, p. 1378-1393 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  234. Published

    The oral and gut microbiomes are perturbed in rheumatoid arthritis and partly normalized after treatment

    Zhang, X., Zhang, D., Jia, H., Feng, Q., Wang, D., Liang, D., Wu, X., Li, J., Tang, L., Li, Y., Lan, Z., Chen, B., Li, Y., Zhong, H., Xie, H., Jie, Z., Chen, W., Tang, S., Xu, X., Wang, X. & 28 others, Cai, X., Liu, S., Xia, Y., Li, J., Qiao, X., Al-Aama, J. Y., Chen, H., Wang, L., Wu, Q., Zhang, F., Zheng, W., Li, Y., Zhang, M., Luo, G., Xue, W., Xiao, L., Li, J., Chen, W., Xu, X., Yin, Y., Yang, H., Wang, J., Kristiansen, Karsten, Liu, L., Li, T., Huang, Q., Li, Y. & Wang, J., 2015, In: Nature Medicine. 21, 8, p. 895-905 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  235. 2014
  236. Published

    2-(2-Bromophenyl)-formononetin and 2-heptyl-formononetin are PPARγ partial agonists and reduce lipid accumulation in 3T3-L1 adipocytes

    Andersen, C., Kotowska, D. E., Tortzen, C., Kristiansen, Karsten, Nielsen, J. & Petersen, R. K., 2014, In: Bioorganic and Medicinal Chemistry. 22, 21, p. 6105-6111 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  237. Published

    Identification of odorant-receptor interactions by global mapping of the human odorome

    Audouze, K. M. L., Tromelin, A., Le Bon, A. M., Belloir, C., Petersen, R. K., Kristiansen, Karsten, Brunak, Søren & Taboureau, O., 2014, In: PLOS ONE. 9, 4, p. e93037 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  238. Published

    Proteomic analysis of cAMP-mediated signaling during differentiation of 3 T3-L1 preadipocytes

    Borkowski, K., Wrzesinski, K., Rogowska-Wrzesinska, A., Audouze, K. M. L., Bakke, J., Petersen, R. K., Haj, F. G., Madsen, L. & Kristiansen, Karsten, 2014, In: B B A - Proteins and Proteomics. 1844, 12, p. 2096-2107 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  239. Published

    Weight cycling promotes fat gain and altered clock gene expression in adipose tissue in C57BL/6J mice

    Dankel, S. N., Degerud, E. M., Borkowski, K., Fjære, E., Midtbø, L. K., Haugen, C., Solsvik, M. H., Lavigne, A. M., Liaset, B., Sagen, J. V., Kristiansen, Karsten, Mellgren, G. & Madsen, L., 2014, In: American Journal of Physiology: Endocrinology and Metabolism. 306, 2, p. E210-E224 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  240. Published

    Screening for bioactive metabolites in plant extracts modulating glucose uptake and fat accumulation

    El-Houri, R. B., Kotowska, D. E., Olsen, L. C. B., Bhattacharya, S., Christensen, L. P., Grevsen, K., Oksbjerg, N., Færgeman, N. J., Kristiansen, Karsten & Christensen, K. B., 2014, In: Evidence - Based Complementary and Alternative Medicine. 2014, 8 p., 156398.

    Research output: Contribution to journalJournal articleResearchpeer-review

  241. Published

    Indomethacin treatment prevents high fat diet-induced obesity and insulin resistance but not glucose intolerance in C57BL/6J Mice

    Fjære, E., Aune, U. L., Røen, K., Keenan, A. H., Ma, Tao, Borkowski, K., Kristensen, D. M. B., Novotny, G. W., Mandrup-Poulsen, Thomas, Hudson, B. D., Milligan, G., Xi, Y., Newman, J. W., Haj, F. G., Liaset, B., Kristiansen, Karsten & Madsen, L., 2014, In: The Journal of Biological Chemistry. 289, 23, p. 16032-16045 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  242. Published

    PPARγ ligand production is tightly linked to clonal expansion during initiation of adipocyte differentiation

    Hallenborg, P., Petersen, R. K., Feddersen, S., Sundekilde, U. K., Hansen, Jacob B., Blagoev, B., Madsen, L. & Kristiansen, Karsten, 2014, In: Journal of Lipid Research. 55, 12, p. 2491-2500 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  243. Published

    The sheep genome illuminates biology of the rumen and lipid metabolism

    Jiang, Y., Xie, M., Chen, W., Talbot, R., Maddox, J. F., Faraut, T., Wu, C., Muzny, D. M., Li, Y., Zhang, W., Stanton, J-A., Brauning, R., Barris, W. C., Hourlier, T., Aken, B. L., Searle, S. M. J., Adelson, D. L., Bian, C., Cam, G. R., Chen, Y. & 53 others, Cheng, S., DeSilva, U., Dixen, K., Dong, Y., Fan, G., Franklin, I. R., Fu, S., Fuentes-Utrilla, P., Guan, R., Highland, M. A., Holder, M. E., Huang, G., Ingham, A. B., Jhangiani, S. N., Kalra, D., Kovar, C. L., Lee, S. L., Liu, W., Liu, X., Lu, C., Lv, T., Mathew, T., McWilliam, S., Menzies, M., Pan, S., Robelin, D., Servin, B., Townley, D., Wang, W., Wei, B., White, S. N., Yang, X., Ye, C., Yue, Y., Zeng, P., Zhou, Q., Hansen, Jacob B., Kristiansen, Karsten, Gibbs, R. A., Flicek, P., Warkup, C. C., Jones, H. E., Oddy, V. H., Nicholas, F. W., McEwan, J. C., Kijas, J. W., Wang, J., Worley, K. C., Archibald, A. L., Cockett, N., Xu, X., Wang, W. & Dalrymple, B. P., 2014, In: Science. 344, 6188, p. 1168-1173 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  244. Published

    Isomeric C-12-Alkamides from the roots of Echinacea purpurea improve basal and insulin-dependent glucose uptake in 3T3-L1 adipocytes

    Kotowska, D. E., El-Houri, R. B., Borkowski, K., Petersen, R. K., Fretté, X., Wolber, G., Grevsen, K., Christensen, K. B., Christensen, L. P. & Kristiansen, Karsten, 2014, In: Planta Medica. 80, 18, p. 1712-1720 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  245. Published

    An integrated catalog of reference genes in the human gut microbiome

    Li, J., Jia, H., Cai, X., Zhong, H., Feng, Q., Sunagawa, S., Arumugam, M., Kultima, J. R., Prifti, E., Nielsen, T., Juncker, A., Manichanh, C., Chen, B., Zhang, W., Levenez, F., Wang, J., Xu, X., Xiao, L., Liang, S., Zhang, D. & 17 others, Zhang, Z., Chen, W., Zhao, H., Al-Aama, J. Y., Edris, S., Yang, H., Wang, J., Hansen, Torben, Nielsen, H. B., Brunak, S., Kristiansen, Karsten, Guarner, F., Pedersen, Oluf Borbye, Doré, J., Ehrlich, S. D., Bork, P. & Wang, J., 2014, In: Nature Biotechnology. 32, 8, p. 834-845 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  246. Published

    Variation and association to diabetes in 2000 full mtDNA sequences mined from an exome study in a Danish population

    Li, S., Besenbacher, S., Li, Y., Kristiansen, Karsten, Grarup, Niels, Albrechtsen, Anders, Sparsø, T. H., Korneliussen, Thorfinn Sand, Hansen, Torben, Wang, J., Nielsen, Rasmus, Pedersen, Oluf Borbye, Bolund, L. & Schierup, M. H., 2014, In: European Journal of Human Genetics. 22, p. 1040-1045 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  247. Published

    Urinary loss of tricarboxylic acid cycle intermediates as revealed by metabolomics studies: an underlying mechanism to reduce lipid accretion by whey protein ingestion?

    Lillefosse, H. H., Clausen, M. R., Yde, C. C., Ditlev, D. B., Zhang, X., Du, Z., Bertram, H. C. S., Madsen, L., Kristiansen, Karsten & Liaset, B., 2014, In: Journal of Proteome Research. 13, 5, p. 2560-2570 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  248. Published

    Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes

    Nielsen, H. B., Almeida, M., Juncker, A., Rasmussen, S., Li, J., Sunagawa, S., Plichta, D. R., Gautier, L., Pedersen, A. G., Le Chatelier, E., Pelletier, E., Bonde, I., Nielsen, T., Manichanh, C., Arumugam, M., Batto, J-M., dos Santos, M. B. Q., Blom, N., Borruel, N., Burgdorf, K. S. & 31 others, Boumezbeur, F., Casellas, F., Doré, J., Dworzynski, P., Guarner, F., Hansen, Torben, Hildebrand, F., Kaas, R. S., Kennedy, S., Kristiansen, Karsten, Kultima, J. R., Léonard, P., Levenez, F., Lund, O., Moumen, B., Le Paslier, D., Pons, N., Pedersen, Oluf Borbye, Prifti, E., Qin, J., Raes, J., Sørensen, Søren Johannes, Tap, J., Tims, S., Ussery, D., Yamada, T., Renault, P., Sicheritz-Pontén, T., Bork, P., Wang, J. & MetaHIT Consortium, M. C., 2014, In: Nature Biotechnology. 32, 8, p. 822–828 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  249. Published

    Activation of the angiopoietin-like 4 (ANGPLT4) gene by milk fat and casein

    Nielsen, S. D., Young, J. F., Mortensen, G., Petersen, R. K., Kristiansen, Karsten & Dalsgaard, T. K., 2014, In: International Dairy Journal. 36, 2, p. 136-142 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  250. Published

    Molecular aspects of adipoepithelial transdifferentiation in mouse mammary gland

    Prokesch, A., Smorlesi, A., Perugini, J., Manieri, M., Ciarmela, P., Mondini, E., Trajanoski, Z., Kristiansen, Karsten, Giordano, A., Bogner-Strauss, J. G. & Cinti, S., 2014, In: Stem Cells. 32, 10, p. 2756-2766 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  251. Published

    A Mixture of cod and scallop protein reduces adiposity and improves glucose tolerance in high-fat fed male C57BL/6J mice

    Tastesen, H. S., Rønnevik, A. K., Borkowski, K., Madsen, L., Kristiansen, Karsten & Liaset, B., 2014, In: P L o S One. 9, 11, 12 p., e112859.

    Research output: Contribution to journalJournal articleResearchpeer-review

  252. Published

    Scallop protein with endogenous high taurine and glycine content prevents high-fat, high-sucrose-induced obesity and improves plasma lipid profile in male C57BL/6J mice

    Tastesen, H. S., Keenan, A. H., Madsen, L., Kristiansen, Karsten & Liaset, B., 2014, In: Amino Acids. 46, 7, p. 1659-1671 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  253. Published

    Multi-block PCA and multi-compartmental study of the metabolic responses to intake of hydrolysed versus intact casein in C57BL/6J mice by NMR-based metabolomics

    Yde, C. C., Clausen, M. R., Ditlev, D. B., Lillefosse, H., Madsen, L., Kristiansen, Karsten, Liaset, B. & Bertram, H. C. S., 2014, In: Metabolomics. 10, 5, p. 938-949 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  254. 2013
  255. Published

    Exome sequencing-driven discovery of coding polymorphisms associated with common metabolic phenotypes

    Albrechtsen, A., Grarup, N., Li, Y., Sparsø, T. H., Tian, G., Cao, H., Jiang, T., Kim, S. Y., Korneliussen, T. S., Li, Q., Nie, C., Wu, R., Skotte, L., Morris, A. P., Ladenvall, C., Cauchi, S., Stancáková, A., Andersen, G., Astrup, A., Banasik, K. & 86 others, Bennett, A. J., Bolund, L., Charpentier, G., Chen, Y., Dekker, J. M., Doney, A. S. F., Dorkhan, M., Forsen, T., Frayling, T. M., Groves, C. J., Gui, Y., Hallmans, G., Hattersley, A. T., He, K., Hitman, G. A., Holmkvist, J., Huang, S., Jiang, H., Jin, X., Justesen, Johanne Marie, Kristiansen, Karsten, Kuusisto, J., Lajer, M., Lantieri, O., Li, W., Liang, H., Liao, Q., Liu, X., Ma, T., Ma, X., Manijak, M. P., Marre, M., Mokrosinski, J., Morris, A. D., Mu, B., Nielsen, A. A., Nijpels, G., Nilsson, P., Palmer, C. N. A., Rayner, N. W., Renström, F., Ribel-Madsen, R., Robertson, N., Rolandsson, O., Rossing, P., Schwartz, Thue W., Slagboom, P. E., Sterner, M., Tang, M., Tarnow, L., Tuomi, T., Van't Riet, E., van Leeuwen, N., V Varga, Tibor, Vestmar, M. A., Walker, M., Wang, B., Wang, Y., Wu, H., Xi, F., Yengo, L., Yu, C., Zhang, X., Zhang, J., Zhang, Q., Zhang, W., Zheng, H., Zhou, Y., Altshuler, D., 't Hart, L. M., Franks, P. W., Balkau, B., Froguel, P., McCarthy, M. I., Laakso, M., Groop, L., Christensen, C., Brandslund, I., Lauritzen, T., Witte, D. R., Linneberg, A., Jørgensen, T., Hansen, Torben, Wang, J., Nielsen, Rasmus & Pedersen, Oluf Borbye, 2013, In: Diabetologia. 56, 2, p. 298-310 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  256. Published

    2-heptyl-formononetin increases cholesterol and induces hepatic steatosis in mice

    Andersen, C., Schjoldager, J. G., Tortzen, C., Vegge, A., Hufeldt, M. R., Skaanild, M. T., Vogensen, Finn Kvist, Kristiansen, Karsten, Hansen, Axel Kornerup & Nielsen, J., 2013, In: Journal of Biomedicine and Biotechnology. 2013, 13 p., 926942.

    Research output: Contribution to journalJournal articleResearchpeer-review

  257. Published

    Bioactive components from flowers of Sambucus nigra L. increase glucose uptake in primary porcine myotube cultures and reduce fat accumulation in Caenorhabditis elegans

    Bhattacharya, S., Christensen, K. B., Olsen, L. C. B., Christensen, L. P., Grevsen, K., Færgeman, N. J., Kristiansen, Karsten, Young, J. F. & Oksbjerg, N., 2013, In: Journal of Agricultural and Food Chemistry. 61, 46, p. 11033-11040 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  258. Published

    A short-read multiplex sequencing method for reliable, cost-effective and high-throughput genotyping in large-scale studies: [plus] Erratum

    Cao, H., Wang, Y., Zhang, W., Chai, X., Zhang, X., Chen, S., Yang, F., Zhang, C., Guo, Y., Liu, Y., Tang, Z., Chen, C., Xue, Y., Zhen, H., Xu, Y., Rao, B., Liu, T., Zhao, M., Zhang, W., Li, Y. & 6 others, Zhang, X., Tellier, L. C. A. M., Krogh, Anders, Kristiansen, Karsten, Wang, J. & Li, J., 2013, In: Human Mutation. 34, 12, p. 1715-1720 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  259. Published

    Dietary eicosapentaenoic acid supplementation accentuates hepatic triglyceride accumulation in mice with impaired fatty acid oxidation capacity

    Du, Z., Ma, Tao, Liaset, B., Keenan, A. H., Araujo, P., Lock, E., Demizieux, L., Degrace, P., Frøyland, L., Kristiansen, Karsten & Madsen, L., 2013, In: B B A - Molecular and Cell Biology of Lipids. 1831, 2, p. 291-299 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  260. Published

    Genetic architecture of vitamin B12 and folate levels uncovered applying deeply sequenced large datasets

    Grarup, N., Sulem, P., Sandholt, C. H., Thorleifsson, G., Ahluwalia, T. V. S., Steinthorsdottir, V., Bjarnason, H., Gudbjartsson, D. F., Magnusson, O. T., Sparsø, T., Albrechtsen, A., Kong, A., Masson, G., Tian, G., Cao, H., Nie, C., Kristiansen, K., Husemoen, L. L., Thuesen, B., Li, Y. & 10 others, Nielsen, Rasmus, Linneberg, Allan René, Olafsson, I., Eyjolfsson, G. I., Jørgensen, T., Wang, J., Hansen, Torben, Thorsteinsdottir, U., Stefánsson, K. & Pedersen, Oluf Borbye, 2013, In: P L o S Genetics. 9, 6, 12 p., e1003530.

    Research output: Contribution to journalJournal articleResearchpeer-review

  261. Published

    Discovery of a novel selective PPARγ ligand with partial agonist binding properties by integrated in Silico/in Vitro work flow

    Kouskoumvekaki, I., Petersen, R. K., Fratev, F. F., Taboureau, O., Nielsen, T. E., Oprea, T., Sonne, Si Brask, Flindt, E. N., Jonsdottir, S. O. & Kristiansen, Karsten, 2013, In: Journal of Chemical Information and Modeling. 53, 4, p. 923-937 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  262. Published

    Richness of human gut microbiome correlates with metabolic markers

    Le Chatelier, E., Nielsen, T., Qin, J., Prifti, E., Hildebrand, F., Falony, G., Almeida, M., Arumugam, M., Batto, J-M., Kennedy, S., Leonard, P., Li, J., Burgdorf, K. S., Grarup, N., Jørgensen, T., Brandslund, I., Nielsen, H. B., Juncker, A., dos Santos, M. B. Q., Levenez, F. & 62 others, Pons, N., Rasmussen, Simon, Sunagawa, S., Tap, J., Tims, S., Zoetendal, E. G., Brunak, S., Clément, K., Doré, J., Kleerebezem, M., Kristiansen, Karsten, Renault, P., Sicheritz-Ponten, T., de Vos, W. M., Zucker, J., Raes, J., Hansen, Torben, Bork, P., Wang, J., Ehrlich, S. D., Pedersen, Oluf Borbye, Guedon, E., Delorme, C., Layec, S., Khaci, G., van de Guchte, M., Vandemeulebrouck, G., Jamet, A., Dervyn, R., Sanchez, N., Maguin, E., Haimet, F., Winogradski, Y., Cultrone, A., Leclerc, M., Juste, C., Blottière, H., Pelletier, E., LePaslier, D., Artiguenave, F., Bruls, T., Weissenbach, J., Turner, K., Parkhill, J., Antolin, M., Manichanh, C., Casellas, F., Boruel, N., Varela, E., Torrejon, A., Guarner, F., Denariaz, G., Derrien, M., van Hylckama Vlieg, J. E. T., Veiga, P., Oozeer, R., Knol, J., Rescigno, M., Brechot, C., Mérieux, A., M'Rini, C. & Yamada, T., 2013, In: Nature. 500, 7464, p. 541-546 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  263. Published

    Hydrolyzed Casein Reduces Diet-Induced Obesity in Male C57BL/6J Mice

    Lillefosse, H. H., Tastesen, H. S., Du, Z., Ditlev, D. B., Thorsen, F. A., Madsen, L., Kristiansen, Karsten & Liaset, B., 2013, In: The Journal of Nutrition. 143, 9, p. 1367-1375 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  264. Published

    Whole-exome sequencing of 2,000 Danish individuals and the role of rare coding variants in type 2 diabetes

    Lohmueller, K. E., Sparsø, T. H., Li, Q., Galijatovic, E. A. A., Korneliussen, T. S., Albrechtsen, A., Banasik, K., Grarup, N., Hallgrimsdottir, I., Kiil, K., Oskari Kilpeläinen, T., Krarup, N. T., Pers, T. H., Sanchez, G., Hu, Y., DeGiorgio, M., Jørgensen, T., Sandbæk, A., Lauritzen, T., Brunak, S. & 6 others, Kristiansen, Karsten, Li, Y., Hansen, Torben, Wang, J., Nielsen, Rasmus & Pedersen, Oluf Borbye, 5 Dec 2013, In: American Journal of Human Genetics. 93, 6, p. 1072-1086 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  265. Published

    Intake of farmed Atlantic salmon fed soybean oil increases insulin resistance and hepatic lipid accumulation in mice

    Midtbø, L. K., Ibrahim, M. M., Myrmel, L. S., Aune, U. L., Alvheim, A. R., Liland, N. S., Torstensen, B. E., Rosenlund, G., Liaset, B., Brattelid, T., Kristiansen, Karsten & Madsen, L., 2013, In: P L o S One. 8, 1, 11 p., e53094.

    Research output: Contribution to journalJournal articleResearchpeer-review

  266. Published

    Mælk der slanker? Mælk som regulator af lipidmetabolisme og overvægt. Afdækning af mælks evne til at øge faste-induceret adipose faktor (FIAF)-aktivitet

    Nielsen, S. D., Dalsgaard, T. K., Mortensen, G., Lorenzen, J. K., Astrup, A., Kristiansen, Karsten & Madsen, L., 2013, In: Maelkeritidende. 2, p. 8-9 2 p.

    Research output: Contribution to journalJournal articleCommunication

  267. Published

    Profiling of lipid species by normal-phase liquid chromatography, nanoelectrospray ionization, and ion trap-orbitrap mass spectrometry

    Sokol, E., Almeida, R., Hannibal-Bach, H. K., Kotowska, D. E., Vogt, J., Baumgart, J., Kristiansen, Karsten, Nitsch, R., Knudsen, J. & Ejsing, C. S., 2013, In: Analytical Biochemistry. 443, 1, p. 88-96 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  268. Published

    Inversin/Nephrocystin-2 is required for fibroblast polarity and directional cell migration

    Veland, I. R., Montjean, R., Eley, L., Pedersen, Lotte Bang, Schwab, A., Goodship, J., Kristiansen, Karsten, Pedersen, Stine Helene Falsig, Saunier, S. & Christensen, Søren Tvorup, 2013, In: P L o S One. 8, 4, 15 p., e60193.

    Research output: Contribution to journalJournal articleResearchpeer-review

  269. Published

    Discovery of new PPARγ agonists based on arylopeptoids

    Worm-Leonhard, K., Hjelmgaard, T., Petersen, R. K., Kristiansen, Karsten & Nielsen, J., 2013, In: Bioorganic & Medicinal Chemistry Letters. 23, p. 4162-4165 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  270. Published

    Ursolic acid induces cell death and modulates autophagy through JNK pathway in apoptosis-resistant colorectal cancer cells

    Xavier, C. P. R., Lima, C. F., Pedro, D. F. N., Wilson, J. M., Kristiansen, Karsten & Pereira-Wilson, C., 2013, In: Journal of Nutritional Biochemistry. 24, 4, p. 706-712 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  271. 2012
  272. Published

    Dietary linoleic acid elevates endogenous 2-AG and anandamide and induces obesity

    Alvheim, A. R., Malde, M. K., Osei-Hyiaman, D., Lin, Y. H., Pawlosky, R. J., Madsen, L., Kristiansen, Karsten, Frøyland, L. & Hibbeln, J. R., 2012, In: Obesity. 20, 10, p. 1984-1994 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  273. Published

    Transcriptome and network changes in climbers at extreme altitudes

    Chen, F., Zhang, W., Liang, Y., Huang, J., Li, K., Green, C. D., Liu, J., Zhang, G., Zhou, B., Yi, X., Wang, W., Liu, H., Xu, X., Shen, F., Qu, N., Wang, Y., Gao, G., San, A., JiangBai, L., Sang, H. & 6 others, Fang, X., Kristiansen, Karsten, Yang, H., Wang, J., Han, J. J. & Wang, J., 2012, In: P L o S One. 7, 2, p. e31645-e31645

    Research output: Contribution to journalJournal articleResearchpeer-review

  274. Published

    Frequent mutations of genes encoding ubiquitin-mediated proteolysis pathway components in clear cell renal cell carcinoma

    Guo, G., Gui, Y., Gao, S., Tang, A., Hu, X., Huang, Y., Jia, W., Li, Z., He, M., Sun, L., Song, P., Sun, X., Zhao, X., Yang, S., Liang, C., Wan, S., Zhou, F., Chen, C., Zhu, J., Li, X. & 35 others, Jian, M., Zhou, L., Ye, R., Huang, P., Chen, J., Jiang, T., Liu, X., Wang, Y., Zou, J., Jiang, Z., Wu, R., Wu, S., Fan, F., Zhang, Z., Liu, L., Yang, R., Liu, X., Wu, H., Yin, W., Zhao, X., Liu, Y., Peng, H., Jiang, B., Feng, Q., Li, C., Xie, J., Lu, J., Kristiansen, Karsten, Li, Y., Zhang, X., Li, S., Wang, J., Yang, H., Cai, Z. & Wang, J., 2012, In: Nature Genetics. 44, 1, p. 17-19 3 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  275. Published

    Mdm2 controls CREB-dependent transactivation and initiation of adipocyte differentiation

    Hallenborg, P., Feddersen, S., Francoz, S., Murano, I., Sundekilde, U., Petersen, R. K., Akimov, V., Olson, M. V., Lozano, G., Cinti, S., Gjertsen, B. T., Madsen, L., Marine, J., Blagoev, B. & Kristiansen, Karsten, 2012, In: Cell Death and Differentiation. 19, 8, p. 1381-1389 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  276. Published

    High-glycemic index carbohydrates abrogate the antiobesity effect of fish oil in mice

    Hao, Q., Lillefosse, H. H., Fjære, E., Myrmel, L. S., Midtbø, L. K., Jarlsby, R. H., Ma, T., Jia, B., Petersen, R. K., Sonne, Si Brask, Chwalibog, André, Frøyland, L., Liaset, B., Kristiansen, Karsten & Madsen, L., 2012, In: American Journal of Physiology: Endocrinology and Metabolism. 302, 9, p. E1097-E1112 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  277. Published

    A comparative analysis of the intestinal metagenomes present in guinea pigs (Cavia porcellus) and humans (Homo sapiens)

    Hildebrand, F., Ebersbach, T., Nielsen, H. B., Li, X., Sonne, Si Brask, dos Santos, M. B. Q., Dimitrov, P., Madsen, L., Qin, J., Wang, J., Raes, J., Kristiansen, Karsten & Licht, T. R., 2012, In: B M C Genomics. 13, 514, 22 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  278. Published

    Single-cell exome sequencing and monoclonal evolution of a JAK2-negative myeloproliferative neoplasm

    Hou, Y., Song, L., Zhu, P., Zhang, B., Tao, Y., Xu, X., Li, F., Wu, K., Liang, J., Shao, D., Wu, H., Ye, X., Ye, C., Wu, R., Jian, M., Chen, Y., Xie, W., Zhang, R., Chen, L., Liu, X. & 20 others, Yao, X., Zheng, H., Yu, C., Li, Q., Gong, Z., Mao, M., Yang, X., Yang, L., Li, J., Wang, W., Lu, Z., Gu, N., Laurie, G., Bolund, L., Kristiansen, Karsten, Wang, J., Yang, H., Li, Y., Zhang, X. & Wang, J., 2012, In: Cell. 148, 5, p. 873-885 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  279. Published

    Activation of protein kinase A and exchange protein directly activated by cAMP promotes adipocyte differentiation of human mesenchymal stem cells

    Jia, B., Madsen, L., Petersen, R. K., Techer, N., Kopperud, R., Ma, T., Døskeland, S. O., Ailhaud, G., Wang, J., Amri, E. & Kristiansen, Karsten, 2012, In: P L o S One. 7, 3, 11 p., 0034114.

    Research output: Contribution to journalJournal articleResearchpeer-review

  280. Published

    Single-cell sequencing analysis characterizes common and cell-lineage-specific mutations in a muscle-invasive bladder cancer

    Li, Y., Xu, X., Song, L., Hou, Y., Li, Z., Tsang, S., Li, F., Im, K., Wu, K., Wu, H., Ye, X., Li, G., Wang, L., Zhang, B., Liang, J., Xie, W., Wu, R., Jiang, H., Liu, X., Yu, C. & 20 others, Zheng, H., Jian, M., Nie, L., Wan, L., Shi, M., Sun, X., Tang, A., Guo, G., Gui, Y., Cai, Z., Li, J., Wang, W., Lu, Z., Zhang, X., Bolund, L., Kristiansen, Karsten, Wang, J., Yang, H., Dean, M. & Wang, J., 2012, In: GigaScience. 1, 12, 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  281. Published

    Of mice and men: factors abrogating the antiobesity effect of omega-3 fatty acids

    Madsen, L. & Kristiansen, Karsten, 2012, In: Adipocytes. 1, 3, p. 173-176 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  282. Published

    PPARgamma-PGC-1alpha activity is determinant of alcohol related breast cancer

    Petersen, R. K., Larsen, Signe Liv Benzon, Jensen, D. M., Christensen, J., Olsen, A., Loft, Steffen, Nellemann, C. L., Overvad, K., Kristiansen, Karsten, Tjønneland, A. & Vogel, U., 2012, In: Cancer Letters. 315, 1, p. 59-68 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  283. Published

    A metagenome-wide association study of gut microbiota in type 2 diabetes

    Qin, J., Li, Y., Cai, Z., Li, S., Zhu, J., Zhang, F., Liang, S., Zhang, W., Guan, Y., Shen, D., Peng, Y., Zhang, D., Jie, Z., Wu, W., Qin, Y., Xue, W., Li, J., Han, L., Lu, D., Wu, P. & 36 others, Dai, Y., Sun, X., Li, Z., Tang, A., Zhong, S., Li, X., Chen, W., Xu, R., Wang, M., Feng, Q., Gong, M., Yu, J., Zhang, Y., Zhang, M., Hansen, Torben, Sanchez, G., Raes, J., Falony, G., Okuda, S., Almeida, M., LeChatelier, E., Renault, P., Pons, N., Batto, J., Zhang, Z., Chen, H., Yang, R., Zheng, W., Li, S., Yang, H., Wang, J., Ehrlich, S. D., Nielsen, R., Pedersen, Oluf Borbye, Kristiansen, Karsten & Wang, J., 2012, In: Nature. 490, 7418, p. 55-60 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  284. Published

    Plant extracts of winter savory, purple coneflower, buckwheat and black elder activate PPAR-γ in COS-1 cells but do not lower blood glucose in Db/db Mice In vivo

    Schrader, E., Wein, S., Kristiansen, Karsten, Christensen, L. P., Rimbach, G. & Wolffram, S., 2012, In: Plant Foods for Human Nutrition. 67, 4, p. 377-383 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  285. Published

    Mammalian tissues defective in nonsense-mediated mRNA decay display highly aberrant splicing patterns

    Weischenfeldt, Joachim Lütken, Waage, J. E., Tian, G., Zhao, J., Damgaard, I., Jakobsen, J. S., Kristiansen, Karsten, Krogh, Anders, Wang, J. & Porse, Bo Torben, 2012, In: Genome Biology (Online Edition). 13, 5, 19 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  286. Published

    Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes

    Xu, X., Liu, X., Ge, S., Jensen, J. D., Hu, F., Li, X., Dong, Y., Gutenkunst, R. N., Fang, L., Huang, L., Li, J., He, W., Zhang, G., Zheng, X., Zhang, F., Li, Y., Yu, C., Kristiansen, K., Zhang, X., Wang, J. & 5 others, Wright, M., McCouch, S., Nielsen, Rasmus, Wang, J. & Wang, W., 2012, In: Nature Biotechnology. 30, 1, p. 105-111 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  287. Published

    Single-cell exome sequencing reveals single-nucleotide mutation characteristics of a kidney tumor: Cell

    Xu, X., Hou, Y., Yin, X., Bao, L., Tang, A., Song, L., Li, F., Tsang, S., Wu, K., Wu, H., He, W., Zeng, L., Xing, M., Wu, R., Jiang, H., Liu, X., Cao, D., Guo, G., Hu, X., Gui, Y. & 19 others, Li, Z., Xie, W., Sun, X., Shi, M., Cai, Z., Wang, B., Zhong, M., Li, J., Lu, Z., Gu, N., Zhang, X., Goodman, L., Bolund, L., Wang, J., Yang, H., Kristiansen, Karsten, Dean, M., Li, Y. & Wang, J., 2012, In: Cell. 148, 5, p. 886-895 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  288. 2011
  289. Published

    Enterotypes of the human gut microbiome: [Plus]Corrigendum [Plus]Addendum

    Arumugam, M., Raes, J., Pelletier, E., Le Paslier, D., Yamada, T., Mende, D. R., Fernandes, G. R., Tap, J., Bruls, T., Batto, J-M., dos Santos, M. B. Q., Borruel, N., Casellas, F., Fernandez, L., Gautier, L., Hansen, T., Hattori, M., Hayashi, T., Kleerebezem, M., Kurokawa, K. & 31 others, Leclerc, M., Levenez, F., Manichanh, C., Nielsen, H. B., Nielsen, T., Pons, N., Poulain, J., Qin, J., Sicheritz-Ponten, T., Tims, S., Torrents, D., Ugarte, E., Zoetendal, E. G., Wang, J., Guarner, F., Pedersen, Oluf Borbye, de Vos, W. M., Brunak, Søren, Doré, J., Antolín, M., Artiguenave, F., Blottiere, H. M., Almeida, M., Brechot, C., Cara, C., Chervaux, C., Cultrone, A., Delorme, C., Denariaz, G., Kristiansen, Karsten & MetaHIT Consortium, M. C., 2011, In: Nature. 473, 7346, p. 174-180 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  290. Published

    Insulin/IGF-I regulation of necdin and brown adipocyte differentiation via CREB- and FoxO1-associated pathways

    Cypess, A. M., Zhang, H., Schulz, T. J., Huang, T. L., Espinoza, D. O., Kristiansen, Karsten, Unterman, T. G. & Tseng, Y., 2011, In: Endocrinology. 152, 10, p. 3680-9 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  291. Published

    Depot-dependent effects of adipose tissue explants on co-cultured hepatocytes

    Du, Z., Ma, T., Lock, E., Hao, Q., Kristiansen, Karsten, Frøyland, L. & Madsen, L., 1 Jan 2011, In: P L o S One. 6, 6, 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  292. Published

    Frequent mutations of chromatin remodeling genes in transitional cell carcinoma of the bladder

    Gui, Y., Guo, G., Huang, Y., Hu, X., Tang, A., Gao, S., Wu, R., Chen, C., Li, X., Zhou, L., He, M., Li, Z., Sun, X., Jia, W., Chen, J., Yang, S., Zhou, F., Zhao, X., Wan, S., Ye, R. & 33 others, Liang, C., Liu, C., Huang, P., Liu, C., Jiang, H., Wang, Y., Zheng, H., Sun, L., Liu, X., Jiang, Z., Feng, D., Chen, X. J., Wu, S., Zou, J., Zhang, Z., Yang, R., Zhao, J., Xu, C., Yin, W., Guan, Z., Ye, J., Zhang, H., Li, J., Kristiansen, Karsten, Nickerson, M. L., Theodorescu, D., Li, Y., Zhang, X., Li, S., Wang, J., Yang, H., Wang, J. & Cai, Z., 2011, In: Nature Genetics. 43, 9, p. 875-8 4 p.

    Research output: Contribution to journalLetterResearchpeer-review

  293. Published

    Transcriptional regulatory program in wild-type and retinoblastoma gene-deficient mouse embryonic fibroblasts during adipocyte differentiation

    Hakim-Weber, R., Krogsdam, A., Jørgensen, C., Fischer, M., Prokesch, A., Bogner-Strauss, J. G., Bornstein, S. R., Hansen, Jacob B., Madsen, L., Kristiansen, Karsten, Trajanoski, Z. & Hackl, H., 2011, In: BMC Research Notes. 4, p. 1-13 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  294. Corticosteroid regulation of Na+,K+-ATPase α1-isoform expression in Atlantic salmon gill during smolt development

    Kiilerich, P., Pedersen, S. H., Kristiansen, Karsten & Madsen, S. S., 2011, In: General and Comparative Endocrinology. 170, 2, p. 283-289 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  295. Increased levels of PPARbeta/delta and cyclin D1 in flat dysplastic ACF and adenomas in Apc(Min/+) mice

    Knutsen, H. K., Olstørn, H. B., Paulsen, J. E., Husøy, T., Goverud, I. L., Løberg, E. M., Kristiansen, Karsten & Alexander, J., 2011, In: Anticancer Research. 25, 6B, p. 3781-9 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  296. Published

    Structural variation in two human genomes mapped at single-nucleotide resolution by whole genome de novo assembly

    Li, Y., Zheng, H., Luo, R., Wu, H., Zhu, H., Li, R., Cao, H., Wu, B., Huang, S., Shao, H., Ma, H., Zhang, F., Feng, S., Zhang, W., Du, H., Tian, G., Li, J., Zhang, X., Li, S., Bolund, L. & 8 others, Kristiansen, Karsten, de Smith, A. J., Blakemore, A. I. F., Coin, L. J. M., Yang, H., Wang, J., Wang, J. & Wang, J., 2011, In: Nature Biotechnology. 29, 8, p. 723-730 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  297. Published

    Nutritional regulation of bile acid metabolism is associated with improved pathological characteristics of the metabolic syndrome

    Liaset, B., Hao, Q., Jørgensen, H. J. H., Hallenborg, P., Du, Z., Ma, T., Marschall, H., Kruhøffer, M., Li, R., Li, Q., Yde, C. C., Criales, G., Bertram, H. C. S., Mellgren, G., Ofjord, E. S., Lock, E., Espe, M., Frøyland, L., Madsen, L. & Kristiansen, Karsten, 2011, In: The Journal of Biological Chemistry. 286, 32, p. 28382-95 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  298. Published

    Sucrose counteracts the anti-inflammatory effect of fish oil in adipose tissue and increases obesity development in mice

    Ma, Tao, Liaset, B., Hao, Q., Petersen, R. K., Fjære, E., Ngo, H. T., Lillefosse, H. H., Jørgensen, Stine Ringholm, Sonne, Si Brask, Treebak, Jonas Thue, Pilegaard, Henriette, Frøyland, L., Kristiansen, Karsten & Madsen, L., 2011, In: P L o S One. 6, 6, 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  299. Published

    Pharmacophore-driven identification of PPAR¿ agonists from natural sources

    Petersen, R. K., Christensen, K. B., Assimopoulou, A. N., Fretté, X., Papageorgiou, V. P., Kristiansen, Karsten & Kouskoumvekaki, I., 2011, In: Journal of Computer - Aided Molecular Design. 25, 2, p. 107-16 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  300. Published

    An Aboriginal Australian genome reveals separate human dispersals into Asia

    Rasmussen, M., Guo, X., Wang, Y., Lohmueller, K. E., Rasmussen, S., Albrechtsen, A., Skotte, L., Lindgreen, S., Metspalu, M., Jombart, T., Kivisild, T., Zhai, W., Eriksson, A., Manica, A., Orlando, L., De La Vega, F. M., Tridico, S., Metspalu, E., Nielsen, K., Avila Arcos, M. D. C. & 38 others, Moreno Mayar, J. Víctor, Muller, C., Dortch, J., Gilbert, M Thomas P, Lund, O., Wesolowska, A., Karmin, M., Weinert, L. A., Wang, B., Li, J., Tai, S., Xiao, F., Hanihara, T., van Driem, G., Jha, A. R., Ricaut, F., de Knijff, P., Migliano, A. B., Gallego Romero, I., Kristiansen, Karsten, Lambert, D. M., Brunak, Søren, Forster, P., Brinkmann, B., Nehlich, O., Bunce, M., Richards, M., Gupta, R., Bustamante, C. D., Krogh, Anders, Foley, R. A., Lahr, M. M., Balloux, F., Sicheritz-Pontén, T., Villems, R., Nielsen, Rasmus, Wang, J. & Willerslev, Eske, 2011, In: Science. 334, 6052, p. 94-98 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  301. Published

    Fatty acid composition in organs.

    Sonne, Si Brask, Treebak, Jonas Thue, Pilegaard, Henriette, Fjare, E., Froyland, L., Kristiansen, Karsten, Hao, Q., Madsen, L., Petersen, R. K., Ngo, H. T., Lillefosse, H. H., Liaset, B., Ringholm, S. & Ma, Tao, 2011

    Research output: Other contributionResearch

  302. Published

    Fatty acid composition in red blood cells.

    Sonne, Si Brask, Treebak, Jonas Thue, Pilegaard, Henriette, Fjare, E., Froyland, L., Kristiansen, Karsten, Hao, Q., Madsen, L., Petersen, R. K., Ngo, H. T., Lillefosse, H. H., Liaset, B., Ringholm, S. & Ma, Tao, 2011

    Research output: Other contributionResearch

  303. Published

    Fatty acid composition in the diets.

    Sonne, Si Brask, Treebak, Jonas Thue, Pilegaard, Henriette, Fjare, E., Froyland, L., Kristiansen, Karsten, Hao, Q., Madsen, L., Petersen, R. K., Ngo, H. T., Lillefosse, H. H., Liaset, B., Ringholm, S. & Ma, Tao, 2011

    Research output: Other contributionResearch

  304. Published

    Macronutrient composition in the diets.

    Sonne, Si Brask, Treebak, Jonas Thue, Pilegaard, Henriette, Fjare, E., Froyland, L., Kristiansen, Karsten, Hao, Q., Madsen, L., Petersen, R. K., Ngo, H. T., Lillefosse, H. H., Liaset, B., Ringholm, S. & Ma, Tao, 2011

    Research output: Other contributionResearch

  305. Published

    A Sleeping Beauty DNA transposon-based genetic sensor for functional screening of vitamin D3 analogues

    Staunstrup, N. H., Sharma, N., Bak, R. O., Svensson, L., Petersen, T. K., Aarenstrup, L., Kristiansen, Karsten, Bolund, L. & Mikkelsen, J. G., 2011, In: B M C Biotechnology. 11, 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  306. 2010
  307. Published

    The emergence of cold-induced brown adipocytes in mouse white fat depots is determined predominantly by white to brown adipocyte transdifferentiation

    Barbatelli, G., Murano, I., Madsen, L., Hao, Q., Jimenez, M., Kristiansen, Karsten, Giacobino, J. P., Matteis, R. D. & Cinti, S., 2010, In: American Journal of Physiology: Endocrinology and Metabolism. 298, 6, p. E1244-E1253

    Research output: Contribution to journalJournal articleResearchpeer-review

  308. Published

    Identification of bioactive compounds from flowers of black elder (Sambucus nigra L.) that activate the human peroxisome proliferator-activated receptor (PPAR) gamma

    Christensen, K. B., Petersen, R. K., Kristiansen, Karsten & Christensen, L. P., 2010, In: Phytotherapy Research. 24, Suppl 2, p. 129-32

    Research output: Contribution to journalJournal articleResearchpeer-review

  309. Published

    Structure-activity study of dihydrocinnamic acids and discovery of the potent FFA1 (GPR40) agonist TUG-469

    Ulven, Elisabeth Rexen, Due-Hansen, M. E., Urban, C., Merten, N., Pfleiderer, M., Karlsen, K. K., Rasmussen, S. S., Steensgaard, M., Hamacher, A., Schmidt, J., Drewke, C., Petersen, R. K., Kristiansen, Karsten, Ullrich, S., Kostenis, E., Kassack, M. U. & Ulven, Trond, 2010, In: ACS Medicinal Chemistry Letters. 1, 7, p. 345-349 5 p.

    Research output: Contribution to journalLetterResearchpeer-review

  310. Published

    beta-oxidation modulates metabolic competition between eicosapentaenoic acid and arachidonic acid regulating prostaglandin E(2) synthesis in rat hepatocytes-Kupffer cells

    Du, Z., Ma, T., Winterthun, S., Kristiansen, Karsten, Frøyland, L. & Madsen, L., 2010, In: BBA General Subjects. 1801, 4, p. 526-36 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  311. Published

    Epidermis-type lipoxygenase 3 regulates adipocyte differentiation and peroxisome proliferator-activated receptor gamma activity

    Hallenborg, P., Jørgensen, C., Petersen, R. K., Feddersen, S., Araujo, P., Markt, P., Langer, T., Furstenberger, G., Krieg, P., Koppen, A., Kalkhoven, E., Madsen, L. & Kristiansen, Karsten, 2010, In: Molecular and Cellular Biology. 30, 16, p. 4077-91 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  312. Published

    ADD1/SREBP1c activates the PGC1-alpha promoter in brown adipocytes

    Hao, Q., Hansen, Jacob B., Petersen, R. K., Hallenborg, P., Jørgensen, C., Cinti, S., Larsen, P. J., Steffensen, K. R., Wang, H., Collins, S., Wang, J., Gustafsson, J., Madsen, L. & Kristiansen, Karsten, 2010, In: BBA General Subjects. 1801, 4, p. 421-9 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  313. Published

    The MAPK-dependent regulation of the Jagged/Notch gene expression by VEGF, bFGF or PPAR gamma mediated angiogenesis in HUVEC

    Kiec-Wilk, B., Grzybowska-Galuszka, J., Polus, A., Pryjma, J., Knapp, A. & Kristiansen, Karsten, 2010, In: Journal of Physiology and Pharmacology. 61, 2, p. 217-25 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  314. Published

    Building the sequence map of the human pan-genome

    Li, R., Li, Y., Zheng, H., Luo, R., Zhu, H., Li, Q., Qian, W., Ren, Y., Tian, G., Li, J., Zhou, G., Zhu, X., Wu, H., Qin, J., Jin, X., Li, D., Cao, H., Hu, X., Blanche, H., Cann, H. & 7 others, Zhang, X., Li, S., Bolund, L., Kristiansen, Karsten, Yang, H., Wang, J. & Wang, J., 2010, In: Nature Biotechnology. 28, 1, p. 57-63 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  315. Published

    De novo assembly of human genomes with massively parallel short read sequencing

    Li, R., Zhu, H., Ruan, J., Qian, W., Fang, X., Shi, Z., Li, Y., Li, S., Shan, G., Kristiansen, Karsten, Li, S., Yang, H., Wang, J. & Wang, J., 2010, In: Genome Research. 20, 2, p. 265-72 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  316. Published

    The sequence and de novo assembly of the giant panda genome

    Li, R., Fan, W., Tian, G., Zhu, H., He, L., Cai, J., Huang, Q., Cai, Q., Li, B., Bai, Y., Zhang, Z., Zhang, Y., Wang, W., Li, J., Wei, F., Li, H., Jian, M., Li, J., Zhang, Z., Nielsen, R. & 103 others, Li, D., Gu, W., Yang, Z., Xuan, Z., Ryder, O. A., Leung, F. C., Zhou, Y., Cao, J., Sun, X., Fu, Y., Fang, X., Guo, X., Wang, B., Hou, R., Shen, F., Mu, B., Ni, P., Lin, R., Qian, W., Wang, G., Yu, C., Nie, W., Wang, J., Wu, Z., Liang, H., Min, J., Wu, Q., Cheng, S., Ruan, J., Wang, M., Shi, Z., Wen, M., Liu, B., Ren, X., Zheng, H., Dong, D., Cook, K., Shan, G., Zhang, H., Kosiol, C., Xie, X., Lu, Z., Zheng, H., Li, Y., Steiner, C. C., Lam, T. T., Lin, S., Zhang, Q., Li, G., Tian, J., Gong, T., Liu, H., Zhang, D., Fang, L., Ye, C., Zhang, J., Hu, W., Xu, A., Ren, Y., Zhang, G., Bruford, M. W., Li, Q., Ma, L., Guo, Y., An, N., Hu, Y., Zheng, Y., Shi, Y., Li, Z., Liu, Q., Chen, Y., Zhao, J., Qu, N., Zhao, S., Tian, F., Wang, X., Wang, H., Xu, L., Liu, X., Vinar, T., Wang, Y., Lam, T., Yiu, S., Liu, S., Zhang, H., Li, D., Huang, Y., Wang, X., Yang, G., Jiang, Z., Wang, J., Qin, N., Li, L., Li, J., Bolund, L., Kristiansen, Karsten, Wong, G. K., Olson, M., Zhang, X., Li, S., Yang, H., Wang, J. & Wang, J., 2010, In: Nature. 463, 7279, p. 311-317 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  317. Published

    Resequencing of 200 human exomes identifies an excess of low-frequency non-synonymous coding variants

    Li, Y., Vinckenbosch, N., Tian, G., Huerta-Sanchez, E., Jiang, T., Jiang, H., Albrechtsen, A., Andersen, G., Cao, H., Korneliussen, T. S., Grarup, N., Guo, Y., Hellman, I., Jin, X., Li, Q., Liu, J., Liu, X., Sparsø, T., Tang, M., Wu, H. & 18 others, Wu, R., Yu, C., Zheng, H., Astrup, A., Bolund, L., Holmkvist, J., Jørgensen, T., Kristiansen, Karsten, Schmitz, O., Schwartz, Thue W., Zhang, X., Li, R., Yang, H., Wang, J., Hansen, Torben, Pedersen, Oluf Borbye, Nielsen, Rasmus & Wang, J., 2010, In: Nature Genetics. 42, 11, p. 969-72 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  318. Published

    The DNA methylome of human peripheral blood mononuclear cells

    Li, Y., Zhu, J., Tian, G., Li, N., Li, Q., Ye, M., Zheng, H., Yu, J., Wu, H., Sun, J., Zhang, H., Chen, Q., Luo, R., Chen, M., He, Y., Jin, X., Zhang, Q., Yu, C., Zhou, G., Sun, J. & 17 others, Huang, Y., Zheng, H., Cao, H., Zhou, X., Guo, S., Hu, X., Li, X., Kristiansen, Karsten, Bolund, L., Xu, J., Wang, W., Yang, H., Wang, J., Li, R., Beck, S., Wang, J. & Zhang, X., 1 Jan 2010, In: PLoS - Biology. 8, 11, p. e1000533-e1000533

    Research output: Contribution to journalJournal articleResearchpeer-review

  319. Published

    The importance of dietary modulation of cAMP and insulin signaling in adipose tissue and the development of obesity

    Madsen, L. & Kristiansen, Karsten, 2010, In: Annals of the New York Academy of Sciences. 1190, 1, p. 1-14 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  320. Published

    UCP1 induction during recruitment of brown adipocytes in white adipose tissue is dependent on cyclooxygenase activity

    Madsen, L., Pedersen, L. M., Lillefosse, H. H., Fjaere, E., Bronstad, I., Hao, Q., Petersen, R. K., Hallenborg, P., Ma, T., De Matteis, R., Araujo, P., Mercader, J., Bonet, M. L., Hansen, J. B., Cannon, B., Nedergaard, J., Wang, J., Cinti, S., Voshol, P., Døskeland, S. O. & 1 others, Kristiansen, Karsten, 30 Jan 2010, In: PLoS ONE. 5, 6, p. 1-13 111391 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  321. Published

    A human gut microbial gene catalogue established by metagenomic sequencing

    MetaHIT Consortium, M. C., 2010, In: Nature. 464, 7285, p. 59-65 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  322. Published

    Ancient human genome sequence of an extinct Palaeo-Eskimo

    Rasmussen, M., Li, Y., Lindgreen, S., Pedersen, J. S., Albrechtsen, A., Moltke, I., Metspalu, M., Metspalu, E., Kivisild, T., Gupta, R., Bertalan, M., Nielsen, K., Gilbert, T., Wang, Y., Raghavan, M., Campos, P., Kamp, H. L. M., Wilson, A. S., Gledhill, A., Tridico, S. & 32 others, Bunce, M., Lorenzen, Eline, Binladen, J. K. M. A., Guo, X., Zhao, J., Zhang, X., Zhang, H., Li, Z., Chen, M., Orlando, L. A. A., Kristiansen, Karsten, Bak, M., Tommerup, Niels, Bendixen, C., Pierre, T. L., Grønnow, B., Meldgaard, Morten, Andreasen, C., Fedorova, S. A., Osipova, L. P., Higham, T. F. G., Ramsey, C. B., Hansen, Thomas van Overeem, Nielsen, Finn Cilius, Crawford, M. H., Brunak, Søren, Sicheritz-Pontén, T., Villems, R., Nielsen, Rasmus, Krogh, Anders, Wang, J. & Willerslev, Eske, 11 Feb 2010, In: Nature. 463, 7282, p. 757-762 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  323. Published

    Persistent Organic Pollutant Exposure Leads to Insulin Resistance Syndrome

    Ruzzin, J., Petersen, R., Meugnier, E., Madsen, L., Lock, E., Lillefosse, H., Ma, T., Pesenti, S., Sonne, Si Brask, Marstrand, T. T., Malde, M. K., Du, Z., Chavey, C., Fajas, L., Lundebye, A., Brand, C. L., Vidal, H., Kristiansen, Karsten & Frøyland, L., 2010, In: Environmental Health Perspectives. 118, 4, p. 465-71

    Research output: Contribution to journalJournal articleResearchpeer-review

  324. Published

    Quercetin enhances adiponectin secretion by a PPAR-gamma independent mechanism

    Wein, S., Behm, N., Petersen, R. K., Kristiansen, Karsten & Wolffram, S., 11 Sep 2010, In: European Journal of Pharmaceutical Sciences. 41, 1, p. 16-22 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  325. Published

    Single base-resolution methylome of the silkworm reveals a sparse epigenomic map

    Xiang, H., Zhu, J., Chen, Q., Dai, F., Li, X., Li, M., Zhang, H., Zhang, G., Li, D., Dong, Y., Zhao, L., Lin, Y., Cheng, D., Yu, J., Sun, J., Zhou, X., Ma, K., He, Y., Zhao, Y., Guo, S. & 13 others, Ye, M., Guo, G., Li, Y., Li, R., Zhang, X., Ma, L., Kristiansen, Karsten, Guo, Q., Jiang, J., Beck, S., Xia, Q., Wang, W. & Wang, J., 2010, In: Nature Biotechnology. 28, 5, p. 516-20 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  326. Published

    Sequencing of 50 human exomes reveals adaptation to high altitude

    Yi, X., Liang, Y., Huerta-Sanchez, E., Jin, X., Cuo, Z. X. P., Pool, J. E., Xu, X., Jiang, H., Vinckenbosch, N., Korneliussen, T. S., Zheng, H., Liu, T., He, W., Li, K., Luo, R., Nie, X., Wu, H., Zhao, M., Cao, H., Zou, J. & 50 others, Shan, Y., Li, S., Yang, Q., Asan, G., Ni, P., Tian, G., Xu, J., Liu, X., Jiang, T., Wu, R., Zhou, G., Tang, M., Qin, J., Wang, T., Feng, S., Li, G., Huasang, G., Luosang, J., Wang, W., Chen, F., Wang, Y., Zheng, X., Li, Z., Bianba, Z., Yang, G., Wang, X., Tang, S., Gao, G., Yong, C., Luo, Z., Gusang, L., Cao, Z., Zhang, Q., Ouyang, W., Ren, X., Liang, H., Zheng, H., Huang, Y., Li, J., Bolund, L., Kristiansen, Karsten, Li, Y., Zhang, Y., Zhang, X., Li, R., Li, S., Yang, H., Nielsen, Rasmus, Wang, J. & Wang, J., 2 Jul 2010, In: Science. 329, 5987, p. 75-8 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  327. Published

    Deep RNA sequencing at single base-pair resolution reveals high complexity of the rice transcriptome

    Zhang, G., Guo, G., Hu, X., Zhang, Y., Li, Q., Li, R., Zhuang, R., Lu, Z., He, Z., Fang, X., Chen, L., Tian, W., Tao, Y., Kristiansen, Karsten, Zhang, X., Li, S., Yang, H., Wang, J. & Wang, J., 2010, In: Genome Research. 20, 5, p. 646-54 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  328. Published

    Cross talk between insulin and bone morphogenetic protein signaling systems in brown adipogenesis

    Zhang, H., Schulz, T. J., Espinoza, D. O., Huang, T. L., Emanuelli, Brice, Kristiansen, Karsten & Tseng, Y., 1 Sep 2010, In: Molecular and Cellular Biology. 30, 17, p. 4224-33 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  329. 2009
  330. Published

    Activation of PPARgamma by Metabolites from the Flowers of Purple Coneflower (Echinacea purpurea)

    Christensen, K. B., Petersen, R. K., Petersen, S., Kristiansen, Karsten & Christensen, L. P., 2009, In: Journal of Natural Products. 72, 5, p. 933–937

    Research output: Contribution to journalJournal articleResearchpeer-review

  331. Published

    Identification of plant extracts with potential antidiabetic properties: effect on human peroxisome proliferator-activated receptor (PPAR), adipocyte differentiation and insulin-stimulated glucose uptake

    Christensen, K. B., Minet, A., Svenstrup, H., Grevsen, K., Zhang, H., Schrader, E., Rimbach, G., Wein, S., Wolffram, S., Kristiansen, Karsten & Christensen, L. P., 2009, In: Phytotherapy Research. 23, 9, p. 1316-1325

    Research output: Contribution to journalJournal articleResearchpeer-review

  332. Published

    Human multipotent adipose-derived stem cells differentiate into functional brown adipocytes

    Elabd, C., Chiellini, C., Carmona, M., Galitzky, J., Cochet, O., Petersen, R. K., Pénicaud, L., Kristiansen, Karsten, Bouloumié, A., Casteilla, L., Dani, C., Ailhaud, G. & Amri, E., 2009, In: Stem Cells. 27, 11, p. 2753-60 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  333. Published

    The tumor suppressors pRB and p53 as regulators of adipocyte differentiation and function

    Hallenborg, P., Feddersen, S., Madsen, L. & Kristiansen, Karsten, 2009, In: Expert Opinion On Therapeutic Targets. 13, 2, p. 235-46 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  334. Published

    The genome of the cucumber, Cucumis sativus L

    Huang, S., Li, R., Zhang, Z., Li, L., Gu, X., Fan, W., Lucas, W. J., Wang, X., Xie, B., Ni, P., Ren, Y., Zhu, H., Li, J., Lin, K., Jin, W., Fei, Z., Li, G., Staub, J., Kilian, A., van der Vossen, E. A. G. & 76 others, Wu, Y., Guo, J., He, J., Jia, Z., Ren, Y., Tian, G., Lu, Y., Ruan, J., Qian, W., Wang, M., Huang, Q., Li, B., Xuan, Z., Cao, J., Asan, Wu, Z., Zhang, J., Cai, Q., Bai, Y., Zhao, B., Han, Y., Li, Y., Li, X., Wang, S., Shi, Q., Liu, S., Cho, W. K., Kim, J., Xu, Y., Heller-Uszynska, K., Miao, H., Cheng, Z., Zhang, S., Wu, J., Yang, Y., Kang, H., Li, M., Liang, H., Ren, X., Shi, Z., Wen, M., Jian, M., Yang, H., Zhang, G., Yang, Z., Chen, R., Liu, S., Li, J., Ma, L., Liu, H., Zhou, Y., Zhao, J., Fang, X., Li, G., Fang, L., Li, Y., Liu, D., Zheng, H., Zhang, Y., Qin, N., Li, Z., Yang, G., Yang, S., Bolund, L., Kristiansen, Karsten, Zheng, H., Li, S., Zhang, X., Yang, H., Wang, J., Sun, R., Zhang, B., Jiang, S., Wang, J., Du, Y. & Li, S., 2009, In: Nature Genetics. 41, 12, p. 1275-81 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  335. Published

    SNP detection for massively parallel whole-genome resequencing

    Li, R., Li, Y., Fang, X., Yang, H., Wang, J., Kristiansen, Karsten & Wang, J., 2009, In: Genome Research. 19, 6, p. 1124-32 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  336. Published

    SOAP2: an improved ultrafast tool for short read alignment

    Li, R., Yu, C., Li, Y., Lam, T., Yiu, S., Kristiansen, Karsten & Wang, J., 2009, In: Bioinformatics. 25, 15, p. 1966-7 1 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  337. Published

    Fish protein hydrolysate elevates plasma bile acids and reduces visceral adipose tissue mass in rats

    Liaset, B., Madsen, L., Hao, Q., Criales, G., Mellgren, G., Marschall, H., Hallenborg, P., Espe, M., Frøyland, L. & Kristiansen, Karsten, 2009, In: BBA General Subjects. 1791, 4, p. 254-62 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  338. Published

    Haploinsufficiency of the retinoblastoma protein gene reduces diet-induced obesity, insulin resistance, and hepatosteatosis in mice

    Mercader, J., Ribot, J., Murano, I., Feddersen, S., Cinti, S., Madsen, L., Kristiansen, Karsten, Bonet, M. L. & Palou, A., 2009, In: American Journal of Physiology: Endocrinology and Metabolism. 297, 1, p. E184-E193

    Research output: Contribution to journalJournal articleResearchpeer-review

  339. Published

    Identification of novel biomolecules and their molecular targets which regulate lipid homeostasis in C. elegans

    Olsen, L. C. B., Nielsen, J., Sonne, Si Brask, Kristiansen, Karsten & Færgeman, N. J., 2009, Chemical Biology - Molecules to Probe Life: Programme and Abstract Book. Chalmers tekniska högskola, p. P6 1 p.

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearch

  340. 2008
  341. HDAC activity is required for p65/RelA-dependent repression of PPARδ-mediated transactivation in human keratinocytes

    Aarenstrup, L., Flindt, E. N., Otkjaer, K., Kirkegaard, M., Andersen, J. S. & Kristiansen, Karsten, 2008, In: Journal of Investigative Dermatology. 128, 5, p. 1095-1106 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  342. Plants for diabetes: Identification of plant extracts and metabolites as partial PPAR¿ agonists with potential anti-diabetic effects

    Christensen, K. B., Minet, A., Grevsen, K., Kristiansen, Karsten & Christensen, L. P., 2008.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  343. SOAP: short oligonucleotide alignment program

    Li, R., Li, Y., Kristiansen, Karsten & Wang, J., 2008, In: Bioinformatics. 24, 5, p. 713-714 2 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  344. Activation of liver X receptors prevents statin-induced death of 3T3-L1 preadipocytes

    Madsen, L., Petersen, R. K., Steffensen, K. R., Pedersen, L. M., Hallenborg, P., Ma, T., Frøyland, L., Døskeland, S. O., Gustafsson, J. & Kristiansen, Karsten, 2008, In: Journal of Biological Chemistry. 283, 33, p. 22723-22736 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  345. Macronutrients and obesity: views, news and reviews

    Madsen, L., Liaset, B. & Kristiansen, Karsten, 2008, In: Future Lipidology. 3, 1, p. 43-74

    Research output: Contribution to journalReviewResearch

  346. cAMP-dependent Signaling Regulates the Adipogenic Effect of n-6 Polyunsaturated Fatty Acids

    Madsen, L., Pedersen, L. M., Liaset, B., Ma, T., Petersen, R. K., van den Berg, S., Pan, J., Müller-Decker, K., Dülsner, E. D., Kleemann, R., Kooistra, T., Døskeland, S. O. & Kristiansen, Karsten, 2008, In: Journal of Biological Chemistry. 283, 11, p. 7196-7205

    Research output: Contribution to journalJournal articleResearchpeer-review

  347. Published

    cAMP-dependent signaling regulates the adipogenic effect of n-6 polyunsaturated fatty acids

    Madsen, L., Pedersen, L. M., Liaset, B., Ma, T., Petersen, R. K., van den Berg, S., Pan, J., Müller-Decker, K., Dülsner, E. D., Kleemann, R., Kooistra, T., Døskeland, S. O. & Kristiansen, Karsten, 2008, In: Journal of Biological Chemistry. 283, 11, p. 7196-205 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  348. Discovery of novel PPAR ligands by a virtual screening approach based on pharmacophore modeling, 3D shape, and electrostatic similarity screening

    Markt, P., Petersen, R. K., Flindt, E. N., Kristiansen, Karsten, Kirchmair, J., Spitzer, G., Distinto, S., Schuster, D., Wolber, G., Laggner, C. & Langer, T., 2008, In: Journal of Medicinal Chemistry. 51, 20, p. 6303-6317 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  349. Cyclic AMP (cAMP)-mediated stimulation of adipocyte differentiation requires the synergistic action of Epac- and cAMP-dependent protein kinase-dependent processes

    Petersen, R. K., Madsen, L., Pedersen, L. M., Hallenborg, P., Hagland, H., Viste, K., Døskeland, S. O. & Kristiansen, Karsten, 2008, In: Molecular and Cellular Biology. 28, 11, p. 3804-3816 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  350. TreeFam: 2008 Update

    Ruan, J., Li, H., Chen, Z., Coghlan, A., Coin, L. J. M., Guo, Y., Hériché, J., Hu, Y., Kristiansen, Karsten, Li, R., Liu, T., Moses, A., Qin, J., Vang, S., Vilella, A. J., Ureta-Vidal, A., Bolund, L., Wang, J. & Durbin, R., 2008, In: Nucleic Acids Symposium Series. 36, Database issue, p. D735-D740

    Research output: Contribution to journalJournal articleResearchpeer-review

  351. Published

    The diploid genome sequence of an Asian individual

    Wang, J., Wang, W., Li, R., Li, Y., Tian, G., Goodman, L., Fan, W., Zhang, J., Li, J., Zhang, J., Guo, Y., Feng, B., Li, H., Lu, Y., Fang, X., Liang, H., Du, Z., Li, D., Zhao, Y., Hu, Y. & 57 others, Yang, Z., Zheng, H., Hellmann, I., Inouye, M., Pool, J., Yi, X., Zhao, J., Duan, J., Zhou, Y., Qin, J., Ma, L., Li, G., Yang, Z., Zhang, G., Yang, B., Yu, C., Liang, F., Li, W., Li, S., Li, D., Ni, P., Ruan, J., Li, Q., Zhu, H., Liu, D., Lu, Z., Li, N., Guo, G., Zhang, J., Ye, J., Fang, L., Hao, Q., Chen, Q., Liang, Y., Su, Y., San, A., Ping, C., Yang, S., Chen, F., Li, L., Zhou, K., Zheng, H., Ren, Y., Yang, L., Gao, Y., Yang, G., Li, Z., Feng, X., Kristiansen, Karsten, Wong, G. K., Nielsen, Rasmus, Durbin, R., Bolund, L., Zhang, X., Li, S.