Karsten Kristiansen

Karsten Kristiansen

Professor


  1. Modulation of keratinocyte gene expression and differentiation by PPAR-selective ligands and tetradecylthioacetic acid

    Westergaard, M., Henningsen, J., Svendsen, M. L., Johansen, C., Jensen, U. B., Schrøder, H. D., Kratchmarova, I., Berge, R. K., Iversen, L., Bolund, L., Kragballe, K. & Kristiansen, Karsten, 2001, In: Journal of Investigative Dermatology. 116, 5, p. 702-12 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  2. Expression and localization of peroxisome proliferator-activated receptors and nuclear factor kappaB in normal and lesional psoriatic skin.

    Westergaard, M., Henningsen, J., Johansen, C., Rasmussen, S., Svendsen, M. L., Jensen, U. B., Schrøder, H. D., Staels, B., Iversen, L., Bolund, L., Kragballe, K. & Kristiansen, Karsten, 2003, In: Journal of Investigative Dermatology. 121, 5, p. 1104-17 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Discovery of new PPARγ agonists based on arylopeptoids

    Worm-Leonhard, K., Hjelmgaard, T., Petersen, R. K., Kristiansen, Karsten & Nielsen, J., 2013, In: Bioorganic & Medicinal Chemistry Letters. 23, p. 4162-4165 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    Full-length single-cell RNA-seq applied to a viral human cancer: applications to HPV expression and splicing analysis in HeLa S3 cells

    Wu, L., Zhang, X., Zhao, Z., Wang, L., Li, B., Li, G., Dean, M., Yu, Q., Wang, Y., Lin, X., Rao, W., Mei, Z., Li, Y., Jiang, R., Yang, H., Li, F., Xie, G., Xu, L., Wu, K., Zhang, J. & 9 others, Chen, J., Wang, T., Kristiansen, Karsten, Zhang, X., Li, Y., Yang, H., Wang, J., Hou, Y. & Xu, X., 2015, In: GigaScience. 4, 17 p., 51.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Ursolic acid induces cell death and modulates autophagy through JNK pathway in apoptosis-resistant colorectal cancer cells

    Xavier, C. P. R., Lima, C. F., Pedro, D. F. N., Wilson, J. M., Kristiansen, Karsten & Pereira-Wilson, C., 2013, In: Journal of Nutritional Biochemistry. 24, 4, p. 706-712 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Single base-resolution methylome of the silkworm reveals a sparse epigenomic map

    Xiang, H., Zhu, J., Chen, Q., Dai, F., Li, X., Li, M., Zhang, H., Zhang, G., Li, D., Dong, Y., Zhao, L., Lin, Y., Cheng, D., Yu, J., Sun, J., Zhou, X., Ma, K., He, Y., Zhao, Y., Guo, S. & 13 others, Ye, M., Guo, G., Li, Y., Li, R., Zhang, X., Ma, L., Kristiansen, Karsten, Guo, Q., Jiang, J., Beck, S., Xia, Q., Wang, W. & Wang, J., 2010, In: Nature Biotechnology. 28, 5, p. 516-20 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    A reference gene catalogue of the pig gut microbiome

    Xiao, L., Estellé, J., Kiilerich, P., Ramayo-Caldas, Y., Xia, Z., Feng, Q., Liang, S., Pedersen, A. Ø., Kjeldsen, N. J., Liu, C., Maguin, E., Doré, J., Pons, N., Le Chatelier, E., Prifti, E., Li, J., Jia, H., Liu, X., Xu, X., Ehrlich, S. D. & 4 others, Madsen, L., Kristiansen, Karsten, Rogel-Gaillard, C. & Wang, J., 2016, In: Nature Microbiology. 1, 6 p., 16161.

    Research output: Contribution to journalLetterResearchpeer-review

  8. Published

    A catalog of the mouse gut metagenome: [incl. Author Correction]

    Xiao, L., Feng, Q., Liang, S., Sonne, S. B., Xia, Z., Qiu, X., Li, X., Long, H., Zhang, J., Zhang, D., Liu, C., Fang, Z., Chou, J., Glanville, J., Hao, Q., Kotowska, D. E., Colding, C. S., Licht, T. R., Wu, D., Yu, J. & 17 others, Sung, J. J. Y., Liang, Q., Li, J., Jia, H., Lan, Z., Tremaroli, V., Dworzynski, P., Nielsen, H. B., Bäckhed, G. F., Dore, J., Le Chatelier, E., Ehrlich, S. D., Lin, J. C., Arumugam, Mani, Wang, J., Madsen, L. & Kristiansen, Karsten, 2015, In: Nature Biotechnology. 33, 10, p. 1103-1108 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    High-fat feeding rather than obesity drives taxonomical and functional changes in the gut microbiota in mice

    Xiao, L., Sonne, S. B., Feng, Q., Chen, N., Xia, Z., Li, X., Fang, Z., Zhang, D., Fjære, E., Midtbø, L. K., Derrien, M., Hugenholtz, F., Tang, L., Li, J., Zhang, J., Liu, C., Hao, Q., Vogel, U. B., Mortensen, A., Kleerebezem, M. & 8 others, Licht, T. R., Yang, H., Wang, J., Li, Y., Arumugam, Mani, Wang, J., Madsen, L. & Kristiansen, Karsten, 8 Apr 2017, In: Microbiome. 5, 12 p., 43.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Shotgun metagenomics of 250 adult twins reveals genetic and environmental impacts on the gut microbiome

    Xie, H., Guo, R., Zhong, H., Feng, Q., Lan, Z., Qin, B., Ward, K. J., Jackson, M. A., Xia, Y., Chen, X., Chen, B., Xia, H., Xu, C., Li, F., Xu, X., Al-Aama, J. Y., Yang, H., Wang, J., Kristiansen, K., Wang, J. & 5 others, Steves, C. J., Bell, J. T., Li, J., Spector, T. D. & Jia, H., 2016, In: Cell Systems. 3, 6, p. 572-584.e3 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Chord: an ensemble machine learning algorithm to identify doublets in single-cell RNA sequencing data

    Xiong, K., Zhou, H., Lin, C., Yin, J., Kristiansen, Karsten, Yang, H. & Li, G., 2022, In: Communications Biology . 5, 11 p., 510.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    An esophageal squamous cell carcinoma classification system that reveals potential targets for therapy

    Xiong, T., Wang, M., Zhao, J., Liu, Q., Yang, C., Luo, W., Li, X., Yang, H., Kristiansen, Karsten, Roy, B. & Zhou, Y., 25 Jul 2017, In: OncoTarget. 8, 30, p. 49851-49860 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Genomic and microbial factors affect the prognosis of anti-pd-1 immunotherapy in nasopharyngeal carcinoma

    Xu, L., Ma, Y., Fang, Chao, Peng, Z., Gao, F., Moll, J. M., Qin, S., Yu, Q., Hou, Y., Kristiansen, Karsten, Fang, W., Brix, S. & Zhang, L., 2022, In: Frontiers in Oncology. 12, 11 p., 953884.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    An efficient pipeline for ancient DNA mapping and recovery of endogenous ancient DNA from whole-genome sequencing data

    Xu, W., Lin, Y., Zhao, K., Li, H., Tian, Y., Ngatia, J. N., Ma, Y., Sahu, S. K., Guo, H., Guo, X., Xu, Y. C., Liu, Huan, Kristiansen, Karsten, Lan, T. & Zhou, X., 2021, In: Ecology and Evolution. 11, 1, p. 390-401 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes

    Xu, X., Liu, X., Ge, S., Jensen, J. D., Hu, F., Li, X., Dong, Y., Gutenkunst, R. N., Fang, L., Huang, L., Li, J., He, W., Zhang, G., Zheng, X., Zhang, F., Li, Y., Yu, C., Kristiansen, K., Zhang, X., Wang, J. & 5 others, Wright, M., McCouch, S., Nielsen, Rasmus, Wang, J. & Wang, W., 2012, In: Nature Biotechnology. 30, 1, p. 105-111 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Single-cell exome sequencing reveals single-nucleotide mutation characteristics of a kidney tumor: Cell

    Xu, X., Hou, Y., Yin, X., Bao, L., Tang, A., Song, L., Li, F., Tsang, S., Wu, K., Wu, H., He, W., Zeng, L., Xing, M., Wu, R., Jiang, H., Liu, X., Cao, D., Guo, G., Hu, X., Gui, Y. & 19 others, Li, Z., Xie, W., Sun, X., Shi, M., Cai, Z., Wang, B., Zhong, M., Li, J., Lu, Z., Gu, N., Zhang, X., Goodman, L., Bolund, L., Wang, J., Yang, H., Kristiansen, Karsten, Dean, M., Li, Y. & Wang, J., 2012, In: Cell. 148, 5, p. 886-895 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Assessment of fecal DNA extraction protocols for metagenomic studies

    Yang, F., Sun, J., Luo, H., Ren, H., Zhou, H., Lin, Y., Han, Mo, Chen, B., Liao, H., Brix, S., Li, J., Yang, H., Kristiansen, Karsten & Zhong, H., 2020, In: GigaScience. 9, 7, 12 p., giaa071.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Multi-block PCA and multi-compartmental study of the metabolic responses to intake of hydrolysed versus intact casein in C57BL/6J mice by NMR-based metabolomics

    Yde, C. C., Clausen, M. R., Ditlev, D. B., Lillefosse, H., Madsen, L., Kristiansen, Karsten, Liaset, B. & Bertram, H. C. S., 2014, In: Metabolomics. 10, 5, p. 938-949 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Comprehensive targeted super-deep next generation sequencing enhances differential diagnosis of solitary pulmonary nodules

    Ye, M., Li, S., Huang, W., Wang, C., Liu, L., Liu, J., Liu, J., Pan, H., Deng, Q., Tang, H., Jiang, L., Huang, W., Chen, X., Shao, D., Peng, Z., Wu, R., Zhong, J., Wang, Z., Zhang, X., Kristiansen, K. & 5 others, Wang, J., Yin, Y., Mao, M., He, J. & Liang, W., 2018, In: Journal of Thoracic Disease. 10, Suppl. 7, p. S820-S829 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    Sequencing of 50 human exomes reveals adaptation to high altitude

    Yi, X., Liang, Y., Huerta-Sanchez, E., Jin, X., Cuo, Z. X. P., Pool, J. E., Xu, X., Jiang, H., Vinckenbosch, N., Korneliussen, T. S., Zheng, H., Liu, T., He, W., Li, K., Luo, R., Nie, X., Wu, H., Zhao, M., Cao, H., Zou, J. & 50 others, Shan, Y., Li, S., Yang, Q., Asan, G., Ni, P., Tian, G., Xu, J., Liu, X., Jiang, T., Wu, R., Zhou, G., Tang, M., Qin, J., Wang, T., Feng, S., Li, G., Huasang, G., Luosang, J., Wang, W., Chen, F., Wang, Y., Zheng, X., Li, Z., Bianba, Z., Yang, G., Wang, X., Tang, S., Gao, G., Yong, C., Luo, Z., Gusang, L., Cao, Z., Zhang, Q., Ouyang, W., Ren, X., Liang, H., Zheng, H., Huang, Y., Li, J., Bolund, L., Kristiansen, Karsten, Li, Y., Zhang, Y., Zhang, X., Li, R., Li, S., Yang, H., Nielsen, Rasmus, Wang, J. & Wang, J., 2 Jul 2010, In: Science. 329, 5987, p. 75-8 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    The draft genome of mandrill (Mandrillus sphinx): an Old World monkey

    Yin, Y., Yang, T., Liu, Huan, Huang, Z., Zhang, Y., Song, Y., Wang, W., Guang, X., Sahu, S. K. & Kristiansen, Karsten, 2020, In: Scientific Reports. 10, 8 p., 2431.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Metagenomic analysis of faecal microbiome as a tool towards targeted non-invasive biomarkers for colorectal cancer

    Yu, J., Feng, Q., Wong, S. H., Zhang, D., Liang, Q. Y., Qin, Y., Tang, L., Zhao, H., Stenvang, J., Li, Y., Wang, X., Xu, X., Chen, N., Wu, W. K. K., Al-Aama, J., Nielsen, H. J., Kiilerich, P., Jensen, B. A. H., Yau, T. O., Lan, Z. & 19 others, Jia, H., Li, J., Xiao, L., Lam, T. Y. T., Ng, S. C., Cheng, A. S., Wong, V. W., Chan, F. K. L., Xu, X., Yang, H., Madsen, L., Datz, C., Tilg, H., Wang, J., Brünner, N., Kristiansen, Karsten, Arumugam, Mani, Sung, J. J. & Wang, J., 2017, In: Gut. 66, p. 70-78 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Impact of a 3-Months Vegetarian Diet on the Gut Microbiota and Immune Repertoire

    Zhang, C., Björkman, A., Cai, K., Liu, G., Wang, C., Li, Y., Xia, H., Sun, L., Kristiansen, Karsten, Wang, J., Han, J., Hammarström, L. & Pan-Hammarström, Q., 2018, In: Frontiers in Immunology. 9, 13 p., 908.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Deep RNA sequencing at single base-pair resolution reveals high complexity of the rice transcriptome

    Zhang, G., Guo, G., Hu, X., Zhang, Y., Li, Q., Li, R., Zhuang, R., Lu, Z., He, Z., Fang, X., Chen, L., Tian, W., Tao, Y., Kristiansen, Karsten, Zhang, X., Li, S., Yang, H., Wang, J. & Wang, J., 2010, In: Genome Research. 20, 5, p. 646-54 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Insulin-like Growth Factor-1/Insulin Bypasses Pref-1/FA1-mediated Inhibition of Adipocyte Differentiation

    Zhang, H., Nøhr, J., Jensen, C. H., Petersen, R. K., Bachmann, E., Teisner, B., Larsen, L. K., Mandrup, S. & Kristiansen, Karsten, 2003, In: Journal of Biological Chemistry. 278, 23, p. 20906-14 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

ID: 6489714