Karsten Kristiansen

Karsten Kristiansen

Professor

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    ORCID: 0000-0002-6024-0917

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    1. Published

      Sequencing and de novo assembly of 150 genomes from Denmark as a population reference

      Sørensen, L. M., Jensen, J. M., Petersen, B., Sibbesen, J. A., Liu, S., Villesen, P., Skov, L., Belling, K. G., Have, C. T., Izarzugaza, J. M. G., Grosjean, M., Bork-Jensen, J., Grove, J., Als, T. D., Huang, S., Chang, Y., Xu, R., Ye, W., Rao, J., Guo, X. & 39 others, Sun, J., Cao, H., Ye, C., van Beusekom, J., Espeseth, T., Flindt, E., Friborg, R. M., Halager, A. E., Le Hellard, S., Hultman, C. M., Lescai, F., Li, S., Lund, O., Løngren, P., Mailund, T., Matey-Hernandez, M. L., Mors, O., Pedersen, C. N. S., Sicheritz-Pontén, T., Sullivan, P., Syed, A., Westergaard, David, Yadav, R., Li, N., Xu, X., Hansen, Torben, Krogh, Anders, Bolund, L., Sørensen, Thorkild I.A., Pedersen, Oluf Borbye, Gupta, R., Rasmussen, Simon, Besenbacher, S., Børglum, A. D., Wang, J., Eiberg, Hans Rudolf Lytchoff, Kristiansen, Karsten, Brunak, Søren & Schierup, M. H., 2017, In: Nature. 548, 7665, p. 87-91 5 p.

      Research output: Contribution to journal › Letter › Research › peer-review

    2. Published

      Sequencing introduced false positive rare taxa lead to biased microbial community diversity, assembly, and interaction interpretation in amplicon studies

      Jia, Y., Zhao, S., Guo, W., Peng, L., Zhao, F., Wang, L., Fan, G., Zhu, Y., Xu, D., Liu, G., Wang, R., Fang, X., Zhang, H., Kristiansen, Karsten, Zhang, W. & Chen, J., 2022, In: Environmental Microbiomes. 17, 18 p., 43.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      Sequencing of 50 human exomes reveals adaptation to high altitude

      Yi, X., Liang, Y., Huerta-Sanchez, E., Jin, X., Cuo, Z. X. P., Pool, J. E., Xu, X., Jiang, H., Vinckenbosch, N., Korneliussen, T. S., Zheng, H., Liu, T., He, W., Li, K., Luo, R., Nie, X., Wu, H., Zhao, M., Cao, H., Zou, J. & 50 others, Shan, Y., Li, S., Yang, Q., Asan, G., Ni, P., Tian, G., Xu, J., Liu, X., Jiang, T., Wu, R., Zhou, G., Tang, M., Qin, J., Wang, T., Feng, S., Li, G., Huasang, G., Luosang, J., Wang, W., Chen, F., Wang, Y., Zheng, X., Li, Z., Bianba, Z., Yang, G., Wang, X., Tang, S., Gao, G., Yong, C., Luo, Z., Gusang, L., Cao, Z., Zhang, Q., Ouyang, W., Ren, X., Liang, H., Zheng, H., Huang, Y., Li, J., Bolund, L., Kristiansen, Karsten, Li, Y., Zhang, Y., Zhang, X., Li, R., Li, S., Yang, H., Nielsen, Rasmus, Wang, J. & Wang, J., 2 Jul 2010, In: Science. 329, 5987, p. 75-8 4 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    4. Published

      Sequencing reveals protective and pathogenic effects on development of diabetes of rare GLIS3 variants

      Sun, J., Have, C. T., Hollensted, M., Grarup, Niels, Linneberg, Allan René, Pedersen, Oluf Borbye, Nielsen, J. S., Rungby, Jørgen, Christensen, C., Brandslund, I., Kristiansen, Karsten, Jun, W., Hansen, Torben & Gjesing, A. P., 2019, In: PLoS ONE. 14, 8, 10 p., e0220805.

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. Published

      Sex differences in the oral microbiome, host traits, and their causal relationships

      Liu, X., Tong, X., Jie, Z., Zhu, J., Tian, L., Sun, Q., Ju, Y., Zou, L., Lu, H., Qiu, X., Li, Q., Liao, Y., Lian, H., Zuo, Y., Chen, X., Rao, W., Ren, Y., Wang, Y., Zi, J., Wang, R. & 11 others, Xu, X., Yang, H., Wang, J., Zong, Y., Liu, W., Hou, Y., Jin, X., Xiao, L., Kristiansen, Karsten, Jia, H. & Zhang, T., 2023, In: iScience. 26, 1, 23 p., 105839.

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      Sex- and age-related trajectories of the adult human gut microbiota shared across populations of different ethnicities

      Zhang, X., Zhong, H., Li, Y., Shi, Z., Ren, H., Zhang, Z., Zhou, X., Tang, S., Han, X., Lin, Y., Yang, F., Wang, D., Fang, C., Fu, Z., Wang, L., Zhu, S., Hou, Y., Xu, X., Yang, H., Wang, J. & 3 others, Kristiansen, Karsten, Li, J. & Ji, L., 2021, In: Nature Aging. 1, 1, p. 87-100 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      Shotgun metagenomics of 250 adult twins reveals genetic and environmental impacts on the gut microbiome

      Xie, H., Guo, R., Zhong, H., Feng, Q., Lan, Z., Qin, B., Ward, K. J., Jackson, M. A., Xia, Y., Chen, X., Chen, B., Xia, H., Xu, C., Li, F., Xu, X., Al-Aama, J. Y., Yang, H., Wang, J., Kristiansen, K., Wang, J. & 5 others, Steves, C. J., Bell, J. T., Li, J., Spector, T. D. & Jia, H., 2016, In: Cell Systems. 3, 6, p. 572-584.e3 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. Published

      Single base-resolution methylome of the silkworm reveals a sparse epigenomic map

      Xiang, H., Zhu, J., Chen, Q., Dai, F., Li, X., Li, M., Zhang, H., Zhang, G., Li, D., Dong, Y., Zhao, L., Lin, Y., Cheng, D., Yu, J., Sun, J., Zhou, X., Ma, K., He, Y., Zhao, Y., Guo, S. & 13 others, Ye, M., Guo, G., Li, Y., Li, R., Zhang, X., Ma, L., Kristiansen, Karsten, Guo, Q., Jiang, J., Beck, S., Xia, Q., Wang, W. & Wang, J., 2010, In: Nature Biotechnology. 28, 5, p. 516-20 4 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. Published

      Single-cell RNA-seq reveals distinct dynamic behavior of sex chromosomes during early human embryogenesis

      Zhou, Q., Wang, T., Leng, L., Zheng, W., Huang, J., Fang, F., Yang, L., Chen, F., Lin, G., Wang, W. & Kristiansen, Karsten, 2019, In: Molecular Reproduction and Development. 86, 7, p. 871-882

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      Single-cell exome sequencing and monoclonal evolution of a JAK2-negative myeloproliferative neoplasm

      Hou, Y., Song, L., Zhu, P., Zhang, B., Tao, Y., Xu, X., Li, F., Wu, K., Liang, J., Shao, D., Wu, H., Ye, X., Ye, C., Wu, R., Jian, M., Chen, Y., Xie, W., Zhang, R., Chen, L., Liu, X. & 20 others, Yao, X., Zheng, H., Yu, C., Li, Q., Gong, Z., Mao, M., Yang, X., Yang, L., Li, J., Wang, W., Lu, Z., Gu, N., Laurie, G., Bolund, L., Kristiansen, Karsten, Wang, J., Yang, H., Li, Y., Zhang, X. & Wang, J., 2012, In: Cell. 148, 5, p. 873-885 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    11. Published

      Single-cell exome sequencing reveals single-nucleotide mutation characteristics of a kidney tumor: Cell

      Xu, X., Hou, Y., Yin, X., Bao, L., Tang, A., Song, L., Li, F., Tsang, S., Wu, K., Wu, H., He, W., Zeng, L., Xing, M., Wu, R., Jiang, H., Liu, X., Cao, D., Guo, G., Hu, X., Gui, Y. & 19 others, Li, Z., Xie, W., Sun, X., Shi, M., Cai, Z., Wang, B., Zhong, M., Li, J., Lu, Z., Gu, N., Zhang, X., Goodman, L., Bolund, L., Wang, J., Yang, H., Kristiansen, Karsten, Dean, M., Li, Y. & Wang, J., 2012, In: Cell. 148, 5, p. 886-895 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    12. Published

      Single-cell sequencing analysis characterizes common and cell-lineage-specific mutations in a muscle-invasive bladder cancer

      Li, Y., Xu, X., Song, L., Hou, Y., Li, Z., Tsang, S., Li, F., Im, K., Wu, K., Wu, H., Ye, X., Li, G., Wang, L., Zhang, B., Liang, J., Xie, W., Wu, R., Jiang, H., Liu, X., Yu, C. & 20 others, Zheng, H., Jian, M., Nie, L., Wan, L., Shi, M., Sun, X., Tang, A., Guo, G., Gui, Y., Cai, Z., Li, J., Wang, W., Lu, Z., Zhang, X., Bolund, L., Kristiansen, Karsten, Wang, J., Yang, H., Dean, M. & Wang, J., 2012, In: GigaScience. 1, 12, 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    13. Site-directed mutagenesis

      Nøhr, J. & Kristiansen, Karsten, 2003, In: Methods in Molecular Biology. 232, p. 127-31 4 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    14. Site-specific strand bias in gene correction using single-stranded oligonucleotides

      Sørensen, C. B., Krogsdam, A., Andersen, M. S., Kristiansen, Karsten, Bolund, L. & Jensen, T. G., 2004, In: Journal of Molecular Medicine. 83, 1, p. 39-49 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    15. Published

      Small Intestinal Tuft Cell Activity Associates With Energy Metabolism in Diet-Induced Obesity

      Arora, P., Andersen, D., Moll, J. M., Danneskiold-Samsøe, Niels Banhos, Xu, L., Zhou, B., Kladis, G., Rausch, P., Workman, C. T., Kristiansen, Karsten & Brix, S., 2021, In: Frontiers in Immunology. 12, 13 p., 629391.

      Research output: Contribution to journal › Journal article › Research › peer-review

    16. Published

      Specific gut pathobionts escape antibody coating and are enriched during flares in patients with severe Crohn's disease

      Eriksen, C., Danneskiold-Samsøe, Niels Banhos, Moll, J. M., Myers, P. N., Bondegaard, P. W., Vejrum, S., Hansen, T. B., Rosholm, L. B., Rausch, P., Allin, K. H., Jess, T., Kristiansen, Karsten, Penders, J., Jonkers, D. & Brix, S., 2023, In: Gut. 73, 3, p. 448-458 11 p., e330677.

      Research output: Contribution to journal › Journal article › Research › peer-review

    17. Published

      Status and perspectives of biomarker validation for diagnosis, stratification, and treatment

      Skov, J., Kristiansen, Karsten, Jespersen, J. & Olesen, P., 2021, In: Public Health. 190, p. 173-175 3 p.

      Research output: Contribution to journal › Letter › Research › peer-review

    18. Published

      Staurosporine-induced cell death in Tetrahymena thermophila has mixed characteristics of both apoptotic and autophagic degeneration

      Christensen, S. T., Chemnitz, J., Straarup, E. M., Kristiansen, Karsten, Wheatley, D. N. & Rasmussen, L., 1998, In: Cell Biology International. 22, 7-8, p. 591-598 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    19. Published

      Structural variation in two human genomes mapped at single-nucleotide resolution by whole genome de novo assembly

      Li, Y., Zheng, H., Luo, R., Wu, H., Zhu, H., Li, R., Cao, H., Wu, B., Huang, S., Shao, H., Ma, H., Zhang, F., Feng, S., Zhang, W., Du, H., Tian, G., Li, J., Zhang, X., Li, S., Bolund, L. & 8 others, Kristiansen, Karsten, de Smith, A. J., Blakemore, A. I. F., Coin, L. J. M., Yang, H., Wang, J., Wang, J. & Wang, J., 2011, In: Nature Biotechnology. 29, 8, p. 723-730 8 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    20. Structure and evolution of the Tetrahymena thermophila gene encoding ribosomal protein L21

      Rosendahl, G., Andreasen, P. H. & Kristiansen, Karsten, 1991, In: Gene. 98, 2, p. 161-7 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    21. Structure of the rat gene encoding the multifunctional acyl-CoA-binding protein: conservation of intron 1 sequences in rodents and man.

      Krøll, J. B., Nøhr, J., Gregersen, N., Kristiansen, Karsten & Mandrup, S., 1996, In: Gene. 173, 2, p. 239-40 1 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    22. Published

      Structure-activity study of dihydrocinnamic acids and discovery of the potent FFA1 (GPR40) agonist TUG-469

      Ulven, Elisabeth Rexen, Due-Hansen, M. E., Urban, C., Merten, N., Pfleiderer, M., Karlsen, K. K., Rasmussen, S. S., Steensgaard, M., Hamacher, A., Schmidt, J., Drewke, C., Petersen, R. K., Kristiansen, Karsten, Ullrich, S., Kostenis, E., Kassack, M. U. & Ulven, Trond, 2010, In: ACS Medicinal Chemistry Letters. 1, 7, p. 345-349 5 p.

      Research output: Contribution to journal › Letter › Research › peer-review

    23. Published

      Substantial viral diversity in bats and rodents from East Africa: insights into evolution, recombination, and cocirculation

      Wang, D., Yang, X., Ren, Z., Hu, B., Zhao, H., Yang, K., Shi, P., Zhang, Z., Feng, Q., Nawenja, C. V., Obanda, V., Robert, K., Nalikka, B., Waruhiu, C. N., Ochola, G. O., Onyuok, S. O., Ochieng, H., Li, B., Zhu, Y., Si, H. & 9 others, Yin, J., Kristiansen, Karsten, Jin, X., Xu, X., Xiao, M., Agwanda, B., Ommeh, S., Li, J. & Shi, Z. L., 2024, In: Microbiome. 12, 1, 17 p., 72.

      Research output: Contribution to journal › Journal article › Research › peer-review

    24. Published

      Sucrose counteracts the anti-inflammatory effect of fish oil in adipose tissue and increases obesity development in mice

      Ma, Tao, Liaset, B., Hao, Q., Petersen, R. K., Fjære, E., Ngo, H. T., Lillefosse, H. H., Jørgensen, Stine Ringholm, Sonne, Si Brask, Treebak, Jonas Thue, Pilegaard, Henriette, Frøyland, L., Kristiansen, Karsten & Madsen, L., 2011, In: P L o S One. 6, 6, 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    25. Published

      Synthesis and biological evaluation of dihydropyrano-[2,3-c]pyrazoles as a new class of PPARγ partial agonists

      Qvortrup, K., Jensen, J. F., Sørensen, M. S., Kouskoumvekaki, I., Petersen, R. K., Taboureau, O., Kristiansen, Karsten & Nielsen, T. E., 28 Feb 2017, In: PLoS ONE. 12, 2, 19 p., e0162642.

      Research output: Contribution to journal › Journal article › Research › peer-review

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