Sarah Rennie

Sarah Rennie

Assistant Professor

Member of:

    ORCID: 0000-0001-9731-6957

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    1. Published

      The YTHDF proteins ECT2 and ECT3 bind largely overlapping target sets and influence target mRNA abundance, not alternative polyadenylation

      Arribas Hernandez, Laura, Rennie, Sarah, Schon, M., Porcelli, C., Enugutti, B., Andersson, Robin, Nodine, M. D. & Brodersen, Peter, 2021, In: eLife. 10, 27 p., e72377.

      Research output: Contribution to journal › Journal article › Research › peer-review

    2. Published

      Principles of mRNA targeting via the Arabidopsis m6A-binding protein ECT2

      Arribas Hernandez, Laura, Rennie, Sarah, Köster, T., Porcelli, C., Lewinski, M., Staiger, D., Andersson, Robin & Brodersen, Peter, 2021, In: eLife. 10, 33 p., e72375.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      DoxoDB: A Database for the Expression Analysis of Doxorubicin-Induced lncRNA Genes

      Distefano, R., Ilieva, M., Madsen, J. H., Rennie, Sarah & Uchida, S., 2023, In: Non-coding RNA. 9, 4, 24 p., 39.

      Research output: Contribution to journal › Journal article › Research › peer-review

    4. Published

      Recommendations for Bioinformatic Tools in lncRNA Research

      Distefano, R., Ilieva, M., Rennie, Sarah & Uchida, S., 2024, In: Current Bioinformatics. 19, 1, p. 14-20 7 p.

      Research output: Contribution to journal › Review › Research › peer-review

    5. Published

      T2DB: A Web Database for Long Non-Coding RNA Genes in Type II Diabetes

      Distefano, R., Ilieva, M., Madsen, J. H., Ishii, H., Aikawa, M., Rennie, Sarah & Uchida, S., 2023, In: Non-coding RNA. 9, 3, 20 p., 30.

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      Transcription factor expression is the main determinant of variability in gene co-activity

      van Duin, Lucas, Krautz, Robert, Rennie, Sarah & Andersson, Robin, 2022, 30 p.

      Research output: Working paper › Preprint › Research

    7. Published

      Promoter sequence and architecture determine expression variability and confer robustness to genetic variants

      Einarsson, H., Salvatore, Marco, Vaagenso, C., Alcaraz, N., Lange, Jette Bornholdt, Rennie, Sarah & Andersson, Robin, 2022, In: eLife. 2022, 36 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. Published

      Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network

      Grapotte, M., Saraswat, M., Bessière, C., Menichelli, C., Ramilowski, J. A., Severin, J., Hayashizaki, Y., Itoh, M., Tagami, M., Murata, M., Kojima-Ishiyama, M., Noma, S., Noguchi, S., Kasukawa, T., Hasegawa, A., Suzuki, H., Nishiyori-Sueki, H., Frith, M. C., Abugessaisa, I., Aitken, S. & 31 others, Aken, B. L., Alam, I., Alam, T., Alasiri, R., Alhendi, A. M. N., Alinejad-Rokny, H., Alvarez, M. J., Andersson, Robin, Arakawa, T., Araki, M., Arbel, T., Lange, Jette Bornholdt, Boyd, M., Chen, Y., Coskun, M., Dalby, M., Ienasescu, H., Jørgensen, M., Kaczkowski, B., Kere, J., Li, K., Lilje, B., Nepal, C., Nguyen, Q. H., Nielsen, L. K., Rennie, Sarah, Sandelin, Albin Gustav, Valen, E., Vitezic, M., Vitting-Seerup, K. & FANTOM Consortium, F. C., 2021, In: Nature Communications. 12, 18 p., 3297.

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. E-pub ahead of print

      High N6-methyladenosine-activated TCEAL8 mRNA is a novel pancreatic cancer marker

      Hara, T., Meng, S., Sato, H., Tatekawa, S., Sasaki, K., Takeda, Y., Tsuji, Y., Arao, Y., Ofusa, K., Kitagawa, T., Yamada, D., Takahashi, H., Kobayashi, S., Motooka, D., Suzuki, Y., Rennie, S., Uchida, S., Mori, M., Ogawa, K., Doki, Y. & 2 others, Eguchi, H. & Ishii, H., 2024, (E-pub ahead of print) In: Cancer Science.

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      On-the-fly selection of cell-specific enhancers, genes, miRNAs and proteins across the human body using SlideBase

      Ienasescu, H., Li, K., Andersson, Robin, Vitezic, M., Rennie, Sarah, Chen, Y., Vitting-Seerup, K., Lagoni, E., Boyd, M., Lange, Jette Bornholdt, de Hoon, M. J. L., Kawaji, H., Lassmann, T., FANTOM Consortium, F. C., Hayashizaki, Y., Forrest, A. R. R., Carninci, P. & Sandelin, Albin Gustav, 2016, In: Database: The Journal of Biological Databases and Curation. 2016, 0, 10 p., baw144.

      Research output: Contribution to journal › Journal article › Research › peer-review

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    ID: 143262591