Sarah Rennie

Sarah Rennie

Assistant Professor

Member of:

    ORCID: 0000-0001-9731-6957

    Publication year:
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    11 - 18 out of 18Page size: 10
    1. 2022
    2. Published

      Transcription factor expression is the main determinant of variability in gene co-activity

      van Duin, Lucas, Krautz, Robert, Rennie, Sarah & Andersson, Robin, 2022, 30 p.

      Research output: Working paper › Preprint › Research

    3. 2021
    4. Published

      Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network

      Grapotte, M., Saraswat, M., Bessière, C., Menichelli, C., Ramilowski, J. A., Severin, J., Hayashizaki, Y., Itoh, M., Tagami, M., Murata, M., Kojima-Ishiyama, M., Noma, S., Noguchi, S., Kasukawa, T., Hasegawa, A., Suzuki, H., Nishiyori-Sueki, H., Frith, M. C., Abugessaisa, I., Aitken, S. & 31 others, Aken, B. L., Alam, I., Alam, T., Alasiri, R., Alhendi, A. M. N., Alinejad-Rokny, H., Alvarez, M. J., Andersson, Robin, Arakawa, T., Araki, M., Arbel, T., Lange, Jette Bornholdt, Boyd, M., Chen, Y., Coskun, M., Dalby, M., Ienasescu, H., Jørgensen, M., Kaczkowski, B., Kere, J., Li, K., Lilje, B., Nepal, C., Nguyen, Q. H., Nielsen, L. K., Rennie, Sarah, Sandelin, Albin Gustav, Valen, E., Vitezic, M., Vitting-Seerup, K. & FANTOM Consortium, F. C., 2021, In: Nature Communications. 12, 18 p., 3297.

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. Published

      Principles of mRNA targeting via the Arabidopsis m6A-binding protein ECT2

      Arribas Hernandez, Laura, Rennie, Sarah, Köster, T., Porcelli, C., Lewinski, M., Staiger, D., Andersson, Robin & Brodersen, Peter, 2021, In: eLife. 10, 33 p., e72375.

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      The YTHDF proteins ECT2 and ECT3 bind largely overlapping target sets and influence target mRNA abundance, not alternative polyadenylation

      Arribas Hernandez, Laura, Rennie, Sarah, Schon, M., Porcelli, C., Enugutti, B., Andersson, Robin, Nodine, M. D. & Brodersen, Peter, 2021, In: eLife. 10, 27 p., e72377.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      hyperTRIBER: a flexible R package for the analysis of differential RNA editing

      Rennie, Sarah, Magnusson, D. H. & Andersson, Robin, 2021, 12 p.

      Research output: Working paper › Preprint › Research

    8. 2018
    9. Published

      Transcription start site analysis reveals widespread divergent transcription in D. melanogaster and core promoter-encoded enhancer activities

      Rennie, Sarah, Dalby, M., Lloret-Llinares, M., Bakoulis, Stylianos, Dalager Vaagensø, C., Jensen, T. H. & Andersson, Robin, 2018, In: Nucleic Acids Research. 46, 11, p. 5455-5469 15 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      Transcriptional decomposition reveals active chromatin architectures and cell specific regulatory interactions

      Rennie, Sarah, Dalby, M., van Duin, Lucas & Andersson, Robin, 2018, In: Nature Communications. 9, 16 p., 487.

      Research output: Contribution to journal › Journal article › Research › peer-review

    11. 2016
    12. Published

      On-the-fly selection of cell-specific enhancers, genes, miRNAs and proteins across the human body using SlideBase

      Ienasescu, H., Li, K., Andersson, Robin, Vitezic, M., Rennie, Sarah, Chen, Y., Vitting-Seerup, K., Lagoni, E., Boyd, M., Lange, Jette Bornholdt, de Hoon, M. J. L., Kawaji, H., Lassmann, T., FANTOM Consortium, F. C., Hayashizaki, Y., Forrest, A. R. R., Carninci, P. & Sandelin, Albin Gustav, 2016, In: Database: The Journal of Biological Databases and Curation. 2016, 0, 10 p., baw144.

      Research output: Contribution to journal › Journal article › Research › peer-review

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