Søren Johannes Sørensen

Søren Johannes Sørensen

Professor


  1. Published

    A meta-proteomics approach to study the interspecies interactions affecting microbial biofilm development in a model community

    Herschend, J., Damholt, Z. B. V., Marquard, A. M., Svensson, B., Sørensen, Søren Johannes, Hägglund, Per Mårten & Burmølle, Mette, 28 Nov 2017, In: Scientific Reports. 7, 13 p., 16483.

    Research output: Contribution to journalJournal articleResearchpeer-review

  2. Published

    A novel baiting microcosm approach used to identify the bacterial community associated with Penicillium bilaii hyphae in soil

    Ghodsalavi, B., Svenningsen, N. B., Hao, X., Olsson, S., Nicolaisen, Mette Haubjerg, Al-Soud, W. A., Sørensen, Søren Johannes & Nybroe, O., 27 Oct 2017, In: PLOS ONE. 12, 10, 14 p., e0187116.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    A post-planktonic era of in vitro infectious models: issues and changes addressed by a clinically relevant wound like media

    Trivedi, Urvish, Madsen, Jonas Stenløkke, Rumbaugh, K. P., Wolcott, R. D., Burmølle, Mette & Sørensen, Søren Johannes, 2017, In: Critical Reviews in Microbiology. 43, 4, p. 453-465 12 p.

    Research output: Contribution to journalReviewResearchpeer-review

  4. Published

    Alterations of the murine gut microbiome in allergic airway disease are independent of surfactant protein D

    Barfod, K. K., Roggenbuck, M., Al-Shuweli, S., Fakih, D., Sørensen, Søren Johannes & Sørensen, G. L., Mar 2017, In: Heliyon. 3, 3, 19 p., e00262.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Antagonism correlates with metabolic similarity in diverse bacteria

    Russel, J., Røder, Henriette Lyng, Madsen, Jonas Stenløkke, Burmølle, Mette & Sørensen, Søren Johannes, 3 Oct 2017, In: Proceedings of the National Academy of Science of the United States of America. 114, 40, p. 10684-10688 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Autogenic succession and deterministic recovery following disturbance in soil bacterial communities

    Jurburg, S. D., Nunes, I. M., Stegen, J. C., Le Roux, X., Priemé, Anders, Sørensen, Søren Johannes & Salles, J. F., 6 Apr 2017, In: Scientific Reports. 7, 11 p., 45691.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Community structure of the metabolically active rumen bacterial and archaeal communities of dairy cows over the transition period

    Zhu, Z., Noel, S. J., Difford, G. F., Abu Al-Soud, W., Brejnrod, A. D., Sørensen, Søren Johannes, Lassen, J., Løvendahl, P. & Højberg, O., 8 Nov 2017, In: PLoS ONE. 12, 11, 24 p., e0187858.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    Comparative genomic analysis reveals ecological differentiation in the genus Carnobacterium

    Iskandar, C. F., Borges, F., Taminiau, B., Daube, G., Zagorec, M., Remenant, B., Leisner, Jørgen, Hansen, M. A., Sørensen, Søren Johannes, Mangavel, C., Cailliez-Grimal, C. & Revol-Junelles, A., 2017, In: Frontiers in Microbiology. 8, 14 p., 357.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Critical Assessment of Metagenome Interpretation: a benchmark of metagenomics software

    Sczyrba, A., Hofmann, P., Belmann, P., Koslicki, D., Janssen, S., Dröge, J., Gregor, I., Majda, S., Fiedler, J., Dahms, E., Bremges, A., Fritz, A., Garrido-Oter, R., Jørgensen, T. S., Shapiro, N., Blood, P. D., Gurevich, A., Bai, Y., Turaev, D., DeMaere, M. Z. & 47 others, Chikhi, R., Nagarajan, N., Quince, C., Meyer, F., Balvociute, M., Hansen, L. H., Sørensen, Søren Johannes, Chia, B. K. H., Denis, B., Froula, J. L., Wang, Z., Egan, R., Kang, D. D., Cook, J. J., Deltel, C., Beckstette, M., Lemaitre, C., Peterlongo, P., Rizk, G., Lavenier, D., Wu, Y., Singer, S. W., Jain, C., Strous, M., Klingenberg, H., Meinicke, P., Barton, M. D., Lingner, T., Lin, H., Liao, Y., Silva, G. G. Z., Cuevas, D. A., Edwards, R. A., Saha, S., Piro, V. C., Renard, B. Y., Pop, M., Klenk, H., Göker, M., Kyrpides, N. C., Woyke, T., Vorholt, J. A., Schulze-Lefert, P., Rubin, E. M., Darling, A. E., Rattei, T. & McHardy, A. C., 2017, In: Nature Methods. 14, 11, p. 1063-1071 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Deciphering conjugative plasmid permissiveness in wastewater microbiomes

    Jacquiod, S. J. A., Brejnrod, A. D., Milani, S. M., Abu Al-Soud, W., Sørensen, Søren Johannes & Riber, Leise, Jul 2017, In: Molecular Ecology. 26, 13, p. 3556-3571 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

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