Josefin Stiller
Assistant Professor
- 2012
Can insect egg deposition 'warn' a plant of future feeding damage by herbivorous larvae?
Beyaert, I., Köpke, D., Stiller, Josefin, Hammerbacher, A., Yoneya, K., Schmidt, A., Gershenzon, J. & Hilker, M., 2012, In: Proceedings of the Royal Society B: Biological Sciences. 279, 1726, p. 101-108Research output: Contribution to journal › Journal article › Research › peer-review
- 2013
Phylogeny, biogeography and systematics of hydrothermal vent and methane seep Amphisamytha (Ampharetidae, Annelida), with descriptions of three new species
Stiller, Josefin, Rousset, V., Pleijel, F., Chevaldonne, P., Vrijenhoek, R. C. & Rouse, G. W., 2013, In: Systematics and Biodiversity. 11, 1, p. 35-65Research output: Contribution to journal › Journal article › Research › peer-review
- 2015
A spectacular new species of seadragon (Syngnathidae)
Stiller, Josefin, Wilson, N. G. & Rouse, G., 2015, In: Royal Society Open Science. 2, 2, 12 p., 140458.Research output: Contribution to journal › Journal article › Research › peer-review
- 2017
Do ampharetids take sedimented steps between vents and seeps? Phylogeny and habitat-use of Ampharetidae (Annelida, Terebelliformia) in chemosynthesis-based ecosystems
Eilertsen, M. H., Kongsrud, J. A., Alvestad, T., Stiller, Josefin, Rouse, G. W. & Rapp, H. T., 2017, In: BMC Evolutionary Biology. 17, 15 p., 222.Research output: Contribution to journal › Journal article › Research › peer-review
Between Hot Rocks and Dry Places: The Status of the Dixie Valley Toad
Forrest, M. J., Stiller, Josefin, King, T. L. & Rouse, G. W., Jul 2017, In: Western North American Naturalist. 77, 2, p. 162-175Research output: Contribution to journal › Journal article › Research › peer-review
First live records of the ruby seadragon (Phyllopteryx dewysea, Syngnathidae)
Rouse, G. W., Stiller, Josefin & Wilson, N. G., 2017, In: Marine Biodiversity Records. 10, 4 p., 2.Research output: Contribution to journal › Journal article › Research › peer-review
The Leafy Seadragon, Phycodurus eques, a Flagship Species with Low But Structured Genetic Variability
Stiller, Josefin, Wilson, N. G., Donnellan, S. & Rouse, G. W., 2017, In: Journal of Heredity. 108, 2, p. 152-162Research output: Contribution to journal › Journal article › Research › peer-review
Barriers to gene flow in common seadragons (Syngnathidae: Phyllopteryx taeniolatus)
Wilson, N. G., Stiller, Josefin & Rouse, G. W., 2017, In: Conservation Genetics. 18, 1, p. 53-66Research output: Contribution to journal › Journal article › Research › peer-review
- 2019
- Published
Comparative Phylogenomics, a Stepping Stone for Bird Biodiversity Studies
Stiller, Josefin & KU, thw266, 2019, In: Diversity. 11, 7, 19 p., 115.Research output: Contribution to journal › Journal article › Research › peer-review
- 2020
- Published
Progressive Cactus is a multiple-genome aligner for the thousand-genome era
Armstrong, J., Hickey, G., Diekhans, M., Fiddes, I. T., Novak, A. M., Deran, A., Fang, Q., Xie, D., Feng, S., Stiller, J., Genereux, D., Johnson, J., Marinescu, V. D., Alföldi, J., Harris, R. S., Lindblad-Toh, K., Haussler, D., Karlsson, E., Jarvis, E. D., Zhang, G. & 1 others, , 2020, In: Nature. 587, 7833, p. 246-251Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dense sampling of bird diversity increases power of comparative genomics
Feng, S., Stiller, J., Deng, Y., Armstrong, J., Fang, Q., Hart Reeve, A., Xie, D., Chen, G., Guo, C., Faircloth, B. C., Petersen, B., Wang, Z., Zhou, Q., Diekhans, M., Chen, W., Andreu-Sánchez, S., Margaryan, A., Howard, J. T., Parent, C., Pacheco, G. & 130 others, , 2020, In: Nature. 587, 7833, p. 252-257Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Evolutionary History, Genomic Adaptation to Toxic Diet, and Extinction of the Carolina Parakeet
Gelabert, P., Sandoval-Velasco, M., Serres, A., de Manuel, M., Renom, P., Margaryan, A., Stiller, J., de-Dios, T., Fang, Q., Feng, S., Mañosa, S., Pacheco, G., Ferrando-Bernal, M., Shi, G., Hao, F., Chen, X., Petersen, B., Olsen, R-A., Navarro, A., Deng, Y. & 6 others, , 2020, In: Current Biology. 30, 1, p. 108-114, e1-e5Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spaghetti to a Tree: A Robust Phylogeny for Terebelliformia (Annelida) Based on Transcriptomes, Molecular and Morphological Data
Stiller, Josefin, Tilic, E., Rousset, V., Pleijel, F. & Rouse, G. W., 2020, In: Biology. 9, 4, 28 p., 73.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
More is needed — Thousands of loci are required to elucidate the relationships of the ‘flowers of the sea’ (Sabellida, Annelida)
Tilic, E., Sayyari, E., Stiller, Josefin, Mirarab, S. & Rouse, G. W., 2020, In: Molecular Phylogenetics and Evolution. 9 p., 106892.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An Indo-Pacific Humpback Dolphin Genome Reveals Insights into Chromosome Evolution and the Demography of a Vulnerable Species
Zhang, P., Zhao, Y., Li, C., Lin, M., Dong, L., Zhang, R., Liu, M., Li, K., Zhang, H., Liu, X., Zhang, Y., Yuan, Y., Liu, H., Seim, I., Sun, S., Du, X., Chang, Y., Li, F., Liu, S., Lee, S. M. Y. & 13 others, , 2020, In: iScience. 23, 10, 52 p., 101640.Research output: Contribution to journal › Journal article › Research › peer-review
- 2021
- Published
Multiple origins of a frameshift insertion in a mitochondrial gene in birds and turtles
Andreu-Sánchez, S., Chen, W., Stiller, Josefin & KU, thw266, 2021, In: GigaScience. 10, 1, 11 p., giaa161.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Using UCEs to track the influence of sea‐level change on leafy seadragon populations
Stiller, Josefin, Rodrigues da Fonseca, Rute Andreia, Alfaro, M. E., Faircloth, B. C., Wilson, N. G. & Rouse, G. W., 2021, In: Molecular Ecology. p. 1364-1380Research output: Contribution to journal › Journal article › Research › peer-review
- 2022
- Published
Ancient proteins resolve controversy over the identity of Genyornis eggshell
Demarchi, B., Stiller, Josefin, Grealy, A., Mackie, Meaghan, Deng, Y., Gilbert, M Thomas P, Clarke, J., Legendre, L. J., Boano, R., Sicheritz-Pontén, Thomas, Magee, J., KU, thw266, Bunce, M., Collins, Matthew James & Miller, G., 2022, In: PNAS. 119, 43, 9 p., e2109326119.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Phylogenomic analyses of mud dragons (Kinorhyncha)
Herranz, Maria, Stiller, Josefin, Worsaae, Katrine & Sørensen, Martin Vinther, 2022, In: Molecular Phylogenetics and Evolution. 168, 10 p., 107375.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Confusion will be my epitaph: Genome-scale discordance stifles phylogenetic resolution of Holothuroidea
Koch, N. M., Tilic, E., Miller, A. K., Stiller, Josefin & Rouse, G. W., 2022, bioRxiv, 42 p.Research output: Working paper › Preprint › Research
- Published
Epistatic Effects Between Amino Acid Insertions and Substitutions Mediate Toxin resistance of Vertebrate Na+, K+-ATPases
Mohammadi, S., Özdemir, H. İ., Ozbek, P., Sumbul, F., Stiller, Josefin, Deng, Y., Crawford, A. J., Rowland, H., Storz, J., Andolfatto, P. & Dobler, S., 2022, In: Molecular Biology and Evolution. 39, 12, 13 p., msac258.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Phylogenomic analysis of Syngnathidae reveals novel relationships, origins of endemic diversity and variable diversification rates
Stiller, Josefin, Short, G., Hamilton, H., Saarman, N., Longo, S., Wainwright, P., Rouse, G. W. & Simison, W. B., 2022, In: BMC Biology. 20, 1, 75.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Phylogenomics resolves ambiguous relationships within Aciculata (Errantia, Annelida)
Tilic, E., Stiller, Josefin, Campos, E., Pleijel, F. & Rouse, G. W., 2022, In: Molecular Phylogenetics and Evolution. 166, 10 p., 107339.Research output: Contribution to journal › Journal article › Research › peer-review
- 2023
- Published
Evolution of the germline mutation rate across vertebrates
Bergeron, Lucie Adrienne, Besenbacher, S., Zheng, J., Li, P., Bertelsen, Mads Frost, Quintard, B., Hoffman, J. I., Li, Z., Leger, J. S., Shao, C., Stiller, Josefin, Gilbert, M Thomas P, Schierup, M. H. & KU, thw266, 2023, In: Nature. 615, p. 285-291Research output: Contribution to journal › Journal article › Research › peer-review
- Published
ClockstaRX: testing molecular clock hypotheses with genomic data
Duchene, David, Duchêne, S., Stiller, Josefin, Heller, Rasmus & Ho, S. Y. W., 2023, bioRxiv, 15 p.Research output: Working paper › Preprint › Research
- Published
Molecular exploration of fossil eggshell uncovers hidden lineage of giant extinct bird
Grealy, A., Miller, G. H., Phillips, M. J., Clarke, S. J., Fogel, M., Patalwala, D., Rigby, P., Hubbard, A., Demarchi, B., Collins, Matthew James, Mackie, Meaghan, Sakalauskaite, J., Stiller, Josefin, Clarke, J. A., Legendre, L. J., Douglass, K., Hansford, J., Haile, J. & Bunce, M., 2023, In: Nature Communications. 14, 14 p., 914.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Confusion will be my epitaph: genome-scale discordance stifles phylogenetic resolution of Holothuroidea
Koch, N. M., Tilic, E., Miller, A. K., Stiller, Josefin & Rouse, G. W., 2023, In: Proceedings of the Royal Society B: Biological Sciences. 290, 2002, 11 p., 20230988.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics
Mc Cartney, A. M., Formenti, G., Mouton, A., Panis, D. D., Marins, L. S., Leitão, H. G., Diedericks, G., Kirangwa, J., Morselli, M., Salces-Ortiz, J., Escudero, N., Iannucci, A., Natali, C., Svardal, H., Fernández, R., Pooter, T. D., Joris, G., Strazisar, M., Wood, J., Herron, K. E. & 30 others, , 2023, 51 p. (bioRxiv).Research output: Working paper › Preprint › Research
- Published
Xyloplax princealberti (Asteroidea, Echinodermata): A New Species That Is Not Always Associated with Wood Falls
Payne, C. Y., Tilic, E., Boschen-Rose, R. E., Gannon, A., Stiller, Josefin, Hiley, A. S., Grupe, B. M., Mah, C. L. & Rouse, G. W., 2023, In: Diversity. 15, 12, 21 p., 1212.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Range-wide population genomics of common seadragons shows secondary contact over a former barrier and insights on illegal capture
Stiller, Josefin, Wilson, N. G. & Rouse, G., 2023, In: BMC Biology. 21, 17 p., 129.Research output: Contribution to journal › Journal article › Research › peer-review
- 2024
- Published
ClockstaRX: Testing Molecular Clock Hypotheses With Genomic Data
Duchene, David, Duchêne, S., Stiller, Josefin, Heller, Rasmus & Ho, S. Y. W., 2024, In: Genome Biology and Evolution. 16, 4, 7 p., evae064.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A region of suppressed recombination misleads neoavian phylogenomics
Mirarab, S., Rivas-González, I., Feng, S., Stiller, Josefin, Fang, Q., Mai, U., Hickey, G., Chen, G., Brajuka, N., Fedrigo, O., Formenti, G., Wolf, J. B. W., Howe, K., Antunes, A., Schierup, M. H., Paten, B., Jarvis, E. D., KU, thw266 & Braun, E. L., 1 Apr 2024, In: Proceedings of the National Academy of Sciences. 121, 15, 10 p., e2319506121.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Complexity of avian evolution revealed by family-level genomes
Stiller, J., Feng, S., Chowdhury, A-A., Rivas-González, I., Duchêne, D. A., Fang, Q., Deng, Y., Kozlov, A., Stamatakis, A., Claramunt, S., Nguyen, J. M. T., Ho, S. Y. W., Faircloth, B. C., Haag, J., Houde, P., Cracraft, J., Balaban, M., Mai, U., Chen, G., Gao, R. & 32 others, , 2024, In: Nature. 629, p. 851–860 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Accepted/In press
Whole-genomes from the extinct Xerces Blue butterfly can help identify declining insect species
de-Dios, T., Fontsere, Claudia, Renom, P., Stiller, Josefin, Llovera, L., Uliano-Silva, M., Sánchez-Gracia, A., Wright, C., Lizano, E., Caballero, B., Navarro, A., Civit, S., Robbins, R. K., Blaxter, M., Marquès-Bonet, T., Vila, R. & Lalueza-Fox, C., 2024, (Accepted/In press) In: eLife. 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 184189534
Most downloads
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160
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Evolutionary History, Genomic Adaptation to Toxic Diet, and Extinction of the Carolina Parakeet
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
109
downloads
Comparative Phylogenomics, a Stepping Stone for Bird Biodiversity Studies
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
59
downloads
Do ampharetids take sedimented steps between vents and seeps? Phylogeny and habitat-use of Ampharetidae (Annelida, Terebelliformia) in chemosynthesis-based ecosystems
Research output: Contribution to journal › Journal article › Research › peer-review