Birgitte Regenberg
Professor
Ecology and Evolution
Universitetsparken 15
2100 København Ø
- 2023
- Published
Circular and Circulating DNA in Inflammatory Bowel Disease: From Pathogenesis to Potential Molecular Therapies
Di Vincenzo, F., Yadid, Y., Petito, V., Emoli, V., Masi, L., Gerovska, D., Araúzo-Bravo, M. J., Gasbarrini, A., Regenberg, Birgitte & Scaldaferri, F., 2023, In: Cells. 12, 15, 29 p., 1953.Research output: Contribution to journal › Review › Research › peer-review
- Published
Did circular DNA shape the evolution of mammalian genomes?
Holt, Sylvester, Arrey Tané, Gerard & Regenberg, Birgitte, 2023, In: Trends in Biochemical Sciences. 48, 4, 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Methods for the purification and detection of single nucleotide KRAS mutations on extrachromosomal circular DNA in human plasma
Hansen, Lasse Bøllehuus, Jakobsen, S. F., Zole, Egija, Noer, Julie Boertmann, Fang, L. T., Alizadeh, S., Johansen, Julia Sidenius, Mohiyuddin, M. & Regenberg, Birgitte, 2023, In: Cancer Medicine. 12, 17, p. 17679-17691 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Variation of extrachromosomal circular DNA in cancer cell lines
dos Santos, Carl Henrik Rung, Hansen, Lasse Bøllehuus, Rojas Triana, Monica, Johansen, A. Z., Perez-Moreno, Mirna & Regenberg, Birgitte, 2023, In: Computational and Structural Biotechnology Journal. 21, p. 4207-4214 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2022
- Published
A unifying model for extrachromosomal circular DNA load in eukaryotic cells
Arrey Tané, Gerard, Keating, S. T. & Regenberg, Birgitte, 2022, In: Seminars in Cell and Developmental Biology. 128, p. 40-50 11 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
CReSIL: accurate identification of extrachromosomal circular DNA from long-read sequences
Wanchai, V., Jenjaroenpun, P., Leangapichart, T., Arrey Tané, Gerard, Burnham, C. M., Tümmler, M. C., Delgado-Calle, J., Regenberg, Birgitte & Nookaew, I., 2022, In: Briefings in Bioinformatics. 23, 6, 11 p., bbac422.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Circle-Seq reveals genomic and disease-specific hallmarks in urinary cell-free extrachromosomal circular DNAs
Lv, W., Pan, X., Han, P., Wang, Z., Feng, W., Xing, X., Wang, Q., Qu, K., Zeng, Y., Zhang, C., Xu, Z., Li, Y., Zheng, T., Lin, L., Liu, C., Liu, X., Li, H., Henriksen, R. A., Bolund, L., Lin, L. & 7 others, , 2022, In: Clinical and Translational Medicine. 12, 4, 16 p., e817.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Circular DNA in the human germline and its association with recombination
Henriksen, Rasmus Henrik Amund, Jenjaroenpun, P., Sjøstrøm, I. B., Jensen, Kristian HR, Prada Luengo, Inigo, Wongsurawat, T., Nookaew, I. & Regenberg, Birgitte, 2022, In: Molecular Cell. 82, 1, p. 209-217.e7Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Extrachromosomal circular DNA in cancer: history, current knowledge, and methods
Noer, Julie Boertmann, Hørsdal, O. K., Xiang, X., Luo, Y. & Regenberg, Birgitte, 2022, In: Trends in Genetics. 38, 7, p. 766-781 16 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Targeted removal of mitochondrial DNA from mouse and human extrachromosomal circular DNA with CRISPR-Cas9
Feng, Weijia, Arrey Tané, Gerard, Zole, Egija, Iv, W., Liang, Xue, Han, Peng, Mohiyuddin, M., Pilegaard, Henriette & Regenberg, Birgitte, 2022, In: Computational and Structural Biotechnology Journal. 20, p. 3059-3067 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2021
- Published
Isolation, characterization, and genome assembly of Barnettozyma botsteinii sp. nov. and novel strains of Kurtzmaniella quercitrusa isolated from the intestinal tract of the termite Macrotermes bellicosus
Arrey Tané, Gerard, Li, G., Murphy, Rob, Guimaraes, L., Alizadeh, S., Poulsen, Michael & Regenberg, Birgitte, 2021, In: G3: Genes, Genomes, Genetics. 11, 12, 13 p., jkab342.Research output: Contribution to journal › Journal article › Research › peer-review
- 2020
- Published
Near-Random Distribution of Chromosome-Derived Circular DNA in the Condensed Genome of Pigeons and the Larger, More Repeat-Rich Human Genome
Møller, H. D., Ramos Madrigal, Jazmin, Prada Luengo, Inigo, Gilbert, M Thomas P & Regenberg, Birgitte, 2020, In: Genome Biology and Evolution. 12, 2, p. 3762-3777 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Replicative aging is associated with loss of genetic heterogeneity from extrachromosomal circular DNA in Saccharomyces cerevisiae
Prada Luengo, Inigo, Møller, H. D., Henriksen, Rasmus Henrik Amund, Gao, Q., Larsen, C. E., Alizadeh, S., Maretty, L., Houseley, J. & Regenberg, Birgitte, 2020, In: Nucleic Acids Research. 48, 14, p. 7883-7898 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
What Is Extrachromosomal Circular DNA and What Does It Do?
Chiu, R. W. K., Dutta, A., Hensson, A. G., Lo, Y. M. D., Mischel, P. & Regenberg, Birgitte, 2020, In: Clinical Chemistry. 66, 6, p. 754-759Research output: Contribution to journal › Editorial › Research › peer-review
- 2019
- Published
Lifelong physical activity is associated with promoter hypomethylation of genes involved in metabolism, myogenesis, contractile properties and oxidative stress resistance in aged human skeletal muscle
Sailani, M. R., Halling, Jens Frey, Møller, H. D., Lee, H., Plomgaard, Peter Stendahl, Pilegaard, Henriette, Snyder, M. P. & Regenberg, Birgitte, 2019, In: Scientific Reports. 9, p. 1-11 3272.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multicellular group formation in Saccharomyces cerevisiae
Fisher, Roberta May & Regenberg, Birgitte, 2019, In: Proceedings. Biological sciences. 286, 1910, 7 p., 20191098.Research output: Contribution to journal › Review › Research › peer-review
- Published
RNAi as a Tool to Study Virulence in the Pathogenic Yeast Candida glabrata
Ishchuku, O. P., Ahmad, K. M., Koruza, K., Bojanovic, K., Sprenger, M., Kasper, L., Brunke, S., Hube, B., Säll, T., Hellmark, T., Gullstrand, B., Brion, C., Freel, K., Schacherer, J., Regenberg, Birgitte, Knechtts, W. & Piskur, J., 2019, In: Frontiers in Microbiology. 10, 17 p., 1679.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sensitive detection of circular DNAs at single-nucleotide resolution using guided realignment of partially aligned reads
Prada Luengo, Inigo, Krogh, Anders, Sørensen, L. M. & Regenberg, Birgitte, 2019, In: BMC Bioinformatics. 20, 9 p., 663.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
To Be or Not to Be: Circular RNAs or mRNAs From Circular DNAs?
Iparraguirre, L., Prada Luengo, Inigo, Regenberg, Birgitte & Otaegui, D., 2019, In: Frontiers in Genetics. 10, 6 p., 940.Research output: Contribution to journal › Journal article › Research › peer-review
- 2018
- Published
Circular DNA elements of chromosomal origin are common in healthy human somatic tissue
Møller, H. D., Mohiyuddin, M., Prada Luengo, Inigo, Sailani, M. R., Halling, Jens Frey, Plomgaard, Peter Stendahl, Maretty, L., Hansen, Anders Johannes, Snyder, M. P., Pilegaard, Henriette, Lam, H. Y. K. & Regenberg, Birgitte, 1 Dec 2018, In: Nature Communications. 9, 12 p., 1069.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CRISPR-C: circularization of genes and chromosome by CRISPR in human cells
Møller, H. D., Lin, L., Xiang, X., Petersen, T. S., Huang, J., Yang, L., Kjeldsen, E., Jensen, U. B., Zhang, X., Liu, X., Xu, X., Wang, J., Yang, H., Church, G. M., Bolund, L., Regenberg, Birgitte & Luo, Y., 2018, In: Nucleic Acids Research. 46, 22, p. 1-13 e131.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Regulation of apoptosis and autophagy in mouse and human skeletal muscle with aging and lifelong exercise training
Dethlefsen, M. M., Halling, Jens Frey, Møller, H. D., Plomgaard, Peter Stendahl, Regenberg, Birgitte, Jørgensen, Stine Ringholm & Pilegaard, Henriette, 2018, In: Experimental Gerontology. 111, p. 141-153Research output: Contribution to journal › Journal article › Research › peer-review
- 2017
- Published
Division of labour in the yeast: Saccharomyces cerevisiae
Wloch-Salamon, D. M., Fisher, Roberta May & Regenberg, Birgitte, Oct 2017, In: Yeast. 34, 10, p. 399-406 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Persistence and drug tolerance in pathogenic yeast
Bojsen, R. K., Regenberg, Birgitte & Folkesson, A., Feb 2017, In: Current Genetics. 63, 1, p. 19-22 4 p.Research output: Contribution to journal › Review › Research › peer-review
- 2016
- Published
A common mechanism involving the TORC1 pathway can lead to amphotericin B-persistence in biofilm and planktonic Saccharomyces cerevisiae populations populations
Bojsen, R. K., Regenberg, Birgitte, Gresham, D. & Folkesson, A., 2016, In: Scientific Reports. 6, 10 p., 21874 .Research output: Contribution to journal › Journal article › Research › peer-review
ID: 546549
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Genetic basis for Saccharomyces cerevisiae biofilm in liquid medium
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Amino acid transporter genes are essential for FLO11-dependent and FLO11-independent biofilm formation and invasive growth in Saccharomyces cerevisiae
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The synthetic amphipathic peptidomimetic LTX109 is a potent fungicide that disturbs plasma membrane integrity in a sphingolipid dependent manner
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