Danillo O. Alvarenga

Danillo O. Alvarenga

Postdoc

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ORCID: 0000-0002-3666-2220

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  1. Genomic and Genotypic Characterization of Cylindrospermopsis raciborskii: Toward an Intraspecific Phylogenetic Evaluation by Comparative Genomics

    Abreu, V. A. C., Popin, R. V., Alvarenga, Danillo Oliveira, Schaker, P. D. C., Hoff-Risseti, C., Varani, A. M. & Fiore, M. F., 2018, In: Frontiers in Microbiology. 9, 12 p., 306.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Potent Inhibitor of Human Trypsins from the Aeruginosin Family of Natural Products

    Ahmed, M. N., Wahlsten, M., Jokela, J., Nees, M., Stenman, U., Alvarenga, Danillo Oliveira, Strandin, T., Sivonen, K., Poso, A., Permi, P., Metsä-Ketelä, M., Koistinen, H. & Fewer, D. P., 2021, In: ACS chemical biology. 16, 11, p. 2537–2546 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Evaluating Eucalyptus leaf colonization by Brasilonema octagenarum (Cyanobacteria, Scytonemataceae) using in planta experiments and genomics

    Alvarenga, Danillo Oliveira, Franco, M. W., Sivonen, K., Fiore, M. F. & Varani, A. M., 1 May 2020, In: PeerJ. 8, 27 p., e9158.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Unraveling host - microbe interactions and ecosystem functions in moss-bacteria symbioses

    Alvarenga, Danillo Oliveira & Rousk, Kathrin, 2022, In: Journal of Experimental Botany. 73, 13, p. 4473–4486 14 p.

    Research output: Contribution to journal › Review › Research › peer-review

  5. Published

    Indirect effects of climate change inhibit N2 fixation associated with the feathermoss Hylocomium splendens in subarctic tundra

    Alvarenga, Danillo Oliveira & Rousk, Kathrin, 2021, In: Science of the Total Environment. 795, 7 p., 148676.

    Research output: Contribution to journal › Letter › Research › peer-review

  6. Published

    Chemical Stimulation of Heterocyte Differentiation by the Feather Moss Hylocomium splendens: a Potential New Step in Plant-Cyanobacteria Symbioses

    Alvarenga, Danillo Oliveira, Elmdam, I. V., Timm, A. B. & Rousk, Kathrin, 2023, In: Microbial Ecology. 86, p. 419-430 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Amazonocrinis nigriterrae gen. nov., sp. nov., Atlanticothrix silvestris gen. nov., sp. nov. and Dendronalium phyllosphericum gen. nov., sp. nov., nostocacean cyanobacteria from Brazilian environments

    Alvarenga, Danillo Oliveira, Andreote, A. P. D., Branco, L. H. Z., Delbaje, E., Cruz, R. B., Varani, A. D. M. & Fiore, M. F., 2021, In: International Journal of Systematic and Evolutionary Microbiology. 71, 5, 12 p., 004811.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. A Metagenomic Approach to Cyanobacterial Genomics

    Alvarenga, Danillo Oliveira, Fiore, M. F. & Varani, A. M., 2017, In: Frontiers in Microbiology. 8, 16 p., 809.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Phyllonema aviceniicola gen. nov., sp. nov. and Foliisarcina bertiogensis gen. nov., sp. nov., epiphyllic cyanobacteria associated with Avicennia schaueriana leaves

    Alvarenga, Danillo Oliveira, Rigonato, J., Branco, L. H. Z., Melo, I. S. & Fiore, M. F., 2016, In: International Journal of Systematic and Evolutionary Microbiology. 66, 2, p. 689-700 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Kryptousia macronema gen. nov., sp. nov. and Kryptousia microlepis sp. nov., nostocalean cyanobacteria isolated from phyllospheres

    Alvarenga, Danillo Oliveira, Andreote, A. P. D., Branco, L. H. Z. & Fiore, M. F., 2017, In: International Journal of Systematic and Evolutionary Microbiology. 67, 9, p. 3301-3309 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    The feather moss Hylocomium splendens affects the transcriptional profile of a symbiotic cyanobacterium in relation to acquisition and turnover of key nutrients

    Alvarenga, Danillo Oliveira, Priemé, Anders & Rousk, Kathrin, 2024, In: Microbial Ecology. 87, 11 p., 49.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. A Practical Guide for Comparative Genomics of Mobile Genetic Elements in Prokaryotic Genomes

    Alvarenga, Danillo Oliveira, Moreira, L. M., Chandler, M. & Varani, A. M., 2017, Comparative Genomics: Methods and Protocols. Setubal, J. C., Stoye, J. & Stadler, P. F. (eds.). Humana Press, p. 213-242 30 p. (Methods in Molecular Biology, Vol. 1704).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  13. Cyanobacteria in mangrove ecosystems

    Alvarenga, Danillo Oliveira, Rigonato, J., Zanini Branco, L. H. & Fiore, M. F., 2015, In: Biodiversity and Conservation. 24, 4, p. 799-817 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. The genome sequence of Dyella jiangningensis FCAV SCS01 from a lignocellulose-decomposing microbial consortium metagenome reveals potential for biotechnological applications

    Desiderato, J. G., Alvarenga, Danillo Oliveira, Constancio, M. T. L., Alves, L. M. C. & Varani, A. M., 2018, In: Genetics and Molecular Biology. 41, 2, p. 507-513 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Molecular and Chemical Analyses of Cyanobacterial Blooms in Tropical Lagoons from Southeast Brazil

    Elias, L. M., Silva-Stenico, M. E., Alvarenga, Danillo Oliveira, Rigonato, J., Fiore, M. F. & Lira, S. P. D., 2015, In: Journal of Water Resource and Protection. 7, 1, p. 50-71 22 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Draft Genome Sequence of the Brazilian Toxic Bloom-Forming Cyanobacterium Microcystis aeruginosa Strain SPC777

    Fiore, M. F., Alvarenga, Danillo Oliveira, Varani, A. M., Hoff-Risseti, C., Crespim, E., Ramos, R. T. J., Silva, A., Schaker, P. D. C., Heck, K., Rigonato, J. & Schneider, M. P. C., 2013, In: Genome Announcements. 1, 4

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Genetic and biochemical evidence for redundant pathways leading to mycosporine-like amino acid biosynthesis in the cyanobacterium Sphaerospermopsis torques-reginae ITEP-024

    Geraldes, V., Medeiros, L. S. D., Lima, S. T., Alvarenga, Danillo Oliveira, Gacesa, R., Long, P. F., Fiore, M. F. & Pinto, E., 2020, In: Algae. 35, 2, p. 177-187 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Biosynthesis of microcystin hepatotoxins in the cyanobacterial genus Fischerella

    Heck, K., Alvarenga, Danillo Oliveira, Shishido, T. K., Varani, A. M., Dörr, F. A., Pinto, E., Rouhiainen, L., Jokela, J., Sivonen, K. & Fiore, M. F., 2018, In: Toxicon. 141, p. 43-50 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Evaluating methods for purifying cyanobacterial cultures by qPCR and high-throughput Illumina sequencing

    Heck, K., Machineski, G. S., Alvarenga, Danillo Oliveira, Vaz, M. G. M. V., Varani, A. D. M. & Fiore, M. F., 2016, In: Journal of Microbiological Methods. 129, p. 55-60 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Biosynthesis of Guanitoxin Enables Global Environmental Detection in Freshwater Cyanobacteria

    Lima, S. T., Fallon, T. R., Cordoza, J. L., Chekan, J. R., Delbaje, E., Hopiavuori, A. R., Alvarenga, Danillo Oliveira, Wood, S. M., Luhavaya, H., Baumgartner, J. T., Dörr, F. A., Etchegaray, A., Pinto, E., McKinnie, S. M. K., Fiore, M. F. & Moore, B. S., 2022, In: Journal of the American Chemical Society. 144, 21, p. 9372-9379

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Genetic organization of anabaenopeptin and spumigin biosynthetic gene clusters in the cyanobacterium Sphaerospermopsis torques-reginae ITEP-024

    Lima, S. T., Alvarenga, Danillo Oliveira, Etchegaray, A., Fewer, D. P., Jokela, J., Varani, A. M., Sanz, M., Dörr, F. A., Pinto, E., Sivonen, K. & Fiore, M. F., 2017, In: A C S Chemical Biology. 12, 3, p. 769-778 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Toxin-Antitoxin Gene Pairs Found in Tn3 Family Transposons Appear To Be an Integral Part of the Transposition Module

    Lima-Mendez, G., Alvarenga, Danillo Oliveira, Ross, K., Hallet, B., Melderen, L. V., Varani, A. M. & Chandler, M., 2020, In: mBio. 11, 2, 19 p., e00452-20.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Towards a phylogenetic position for the morphologically-defined genus Pannus (Cyanobacteria)

    Malone, C. F. D. S., Alvarenga, Danillo Oliveira, Fiore, M. F. & Sant'Anna, C. L., 2014, In: Nova Hedwigia. 99, 3-4, p. 511-524 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Mining of Cyanobacterial Genomes Indicates Natural Product Biosynthetic Gene Clusters Located in Conjugative Plasmids

    Popin, R. V., Alvarenga, Danillo Oliveira, Castelo-Branco, R., Fewer, D. P. & Sivonen, K., 2021, In: Frontiers in Microbiology. 12, 12 p., 684565.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Draft Genome Sequence of a Novel Culturable Marine Chroococcalean Cyanobacterium from the South Atlantic Ocean

    Rigonato, J., Alvarenga, Danillo Oliveira, Branco, L. H. Z., Varani, A. M., Brandini, F. P. & Fiore, M. F., 2015, In: Genome Announcements. 3, 2, 2 p., e00384-15.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Cyanobacterial diversity in the phyllosphere of a mangrove forest

    Rigonato, J., Alvarenga, Danillo Oliveira, Andreote, F. D., Franco Dias, A. C., Melo, I. S., Kent, A. & Fiore, M. F., 2012, In: FEMS Microbiology Ecology. 80, 2, p. 312-322 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Drivers of cyanobacterial diversity and community composition in mangrove soils in south-east Brazil

    Rigonato, J., Kent, A. D., Alvarenga, Danillo Oliveira, Andreote, F. D., Beirigo, R. M., Vidal-Torrado, P. & Fiore, M. F., 2013, In: Environmental Microbiology. 15, 4, p. 1103-1114 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Tropical Cyanobacteria and their Biotechnological Applications

    Rigonato, J., Alvarenga, Danillo Oliveira & Fiore, M. F., 2017, Diversity and Benefits of Microorganisms from the Tropics. de Azevedo, J. L. & Quecine, M. C. (eds.). Springer, p. 139-167 29 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  29. Aliterella atlantica gen. nov., sp. nov., and Aliterella antarctica sp. nov., novel members of coccoid Cyanobacteria

    Rigonato, J., Gama, W. A., Alvarenga, Danillo Oliveira, Branco, L. H. Z., Brandini, F. P., Genuário, D. B. & Fiore, M. F., 2016, In: International Journal of Systematic and Evolutionary Microbiology. 66, 8, p. 2853-2861 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. TnCentral: a Prokaryotic Transposable Element Database and Web Portal for Transposon Analysis

    Ross, K., Varani, A. M., Snesrud, E., Huang, H., Alvarenga, Danillo Oliveira, Zhang, J., Wu, C., McGann, P. & Chandler, M., 14 Sep 2021, In: mBio. 12, 5, e02060-21.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. The Biosynthesis of Rare Homo-Amino Acid Containing Variants of Microcystin by a Benthic Cyanobacterium

    Shishido, T. K., Jokela, J., Humisto, A., Suurnäkki, S., Wahlsten, M., Alvarenga, Danillo Oliveira, Sivonen, K. & Fewer, D. P., 2019, In: Marine Drugs. 17, 5, p. 271 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. The mitochondrial genome of the terrestrial carnivorous plant Utricularia reniformis (Lentibulariaceae): structure, comparative analysis and evolutionary landmarks

    Silva, S. R., Alvarenga, Danillo Oliveira, Aranguren, Y., Penha, H. A., Fernandes, C. C., Pinheiro, D. G., Oliveira, M. T., Michael, T. P., Miranda, V. F. O. & Varani, A. M., 2017, In: PLoS ONE. 12, 7, 26 p., e0180484.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Natural Products from Cyanobacteria with Antimicrobial and Antitumor Activity

    Silva-Stenico, M. E., Kaneno, R., Zambuzi, F. A., Vaz, M. G. M. V., Alvarenga, Danillo Oliveira & Fiore, M. F., 2013, In: Current Pharmaceutical Biotechnology. 14, 9, p. 820-828 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Residual biomass from surfactin production is a source of arginase and adsorbed surfactin that is useful for environmental remediation

    Silveira, T. D. C., Gomes, W. E., Tonon, G. C., Beatto, T. G., Spogis, N., Cunha, L. H. D., Lattaro, B. P., Nogueira, A. B., Mendes, R. K., Alvarenga, Danillo Oliveira & Etchegaray, A., 2021, In: World Journal of Microbiology and Biotechnology. 37, 7, 12 p., 123.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Unraveling a Lignocellulose-Decomposing Bacterial Consortium from Soil Associated with Dry Sugarcane Straw by Genomic-Centered Metagenomics

    Weiss, B., Souza, A. C. O., Constancio, M. T. L., Alvarenga, Danillo Oliveira, Pylro, V. S., Alves, L. M. C. & Varani, A. M., 2021, In: Microorganisms. 9, 5, 18 p., 995.

    Research output: Contribution to journal › Journal article › Research › peer-review

ID: 238718450