Søren Johannes Sørensen

Søren Johannes Sørensen

Professor

ORCID: 0000-0001-6227-9906

Publication year:
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301 - 400 out of 411Page size: 100
  1. 2011
  2. Published

    Nitrogenase gene amplicons from global marine surface waters are dominated by genes of non-cyanobacteria

    Farnelid, H., Andersson, A. F., Bertilsson, S., Abu Al-Soud, W., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Steward, G. F., Hagström, Å. & Riemann, Lasse, 2011, In: P L o S One. 6, 4, p. e19223 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Quantitative metagenomic analyses based on average genome size normalization

    Frank, J. A. & Sørensen, Søren Johannes, 2011, In: Applied and Environmental Microbiology. 77, 7, p. 2513-2521 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Construction of biosensors to investigate physiological diversity in fermentation processes

    Han, S., Lundin, L. & Sørensen, Søren Johannes, 2011.

    Research output: Contribution to conference › Poster › Research

  5. Published

    Design and Synthesis of a Quintessential Self-Transmissible IncX1 Plasmid, pX1.0

    Hansen, Lars Hestbjerg, Bentzon-Tilia, M., Bentzon-Tilia, S., Norman, A., Rafty, L. & Sørensen, Søren Johannes, May 2011, In: P L o S One. 6, 5, 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Bias in bacterial diversity as a result of Nycodenz extraction from bulk soil

    Holmsgaard, P. N., Norman, A., Hede, S. C., Poulsen, P. H. B., Al-Soud, W. A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 14 Jul 2011, In: Soil Biology & Biochemistry. 43, 10, p. 2152-2159 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Sequence and comparative analysis of Leuconostoc dairy bacteriophages

    Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Hammer, K., Pedersen, P. D., Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2011. 1 p.

    Research output: Contribution to conference › Poster › Research

  8. Published

    Sequence and comparative analysis of Leuconostoc dairy bacteriophages

    Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Hammer, K., Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2011. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  9. Published

    Predominant genera of fecal microbiota in children with atopic dermatitis are not altered by intake of probiotic bacteria Lactobacillus acidophilus NCFM and Bifidobacterium animalis subsp.lactis Bi-07

    Larsen, Nadja, Vogensen, Finn Kvist, Gøbel, R. J., Michaelsen, Kim F., Abu Al-Soud, W., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Jakobsen, M., 2011, In: FEMS Microbiology Ecology. 75, 3, p. 482-496 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Experimental methods and modeling techniques for description of cell population heterogeneity

    Lencastre Fernandes, R., Nierychlo, M., Lundin, L., Pedersen, A. E., Tellez, P. E. P., Dutta, A., Carlquist, M., Bolic, A., Schäpper, D., Brunetti, A. C., Helmark, S., Heins, A-L., Jensen, A. D., Nopens, I., Rottwitt, K., Szita, N., Elsas, J. D. V., Nielsen, P. H., Martinussen, J., Sørensen, S. J. & 2 others, Eliasson Lantz, A. & Gernaey, K., 2011, In: Biotechnology Advances. 29, 6, p. 575-599 25 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Characterization of pIC13_78, a biofilm enabling plasmid

    Madsen, Jonas Stenløkke, Norman, A., Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2011.

    Research output: Contribution to conference › Poster › Research

  12. Published

    Characterization of bacterial populations in Danish raw milk cheeses made with different starter cultures by denaturating gradient gel electrophoresis and pyrosequencing

    Masoud, W. M. H., Takamiya, M. K. W., Vogensen, Finn Kvist, Lillevang, S., Abu Al-Soud, W., Sørensen, Søren Johannes & Jakobsen, M., 2011, In: International Dairy Journal. 21, 3, p. 142-148 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Diversity and characterization of mercury-resistant bacteria in snow, freshwater and sea-ice brine from the High Arctic

    Møller, A., Barkay, T., Abu Al-Soud, W., Sørensen, Søren Johannes, Skov, H. & Kroer, Niels, 1 Mar 2011, In: F E M S Microbiology Ecology. 75, 3, p. 390-401 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Limiting the occurrence of antimicrobial resistance through targeted interventions directed at plasmid transfer and stability

    Riber, Leise, Charbon, G., Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2011.

    Research output: Contribution to conference › Poster › Research › peer-review

  15. Published

    Extrachromosomal replicons:

    Sørensen, Søren Johannes, 2011, Lewin's GENES X. Lewin, B., Krebs, J. E., Goldstein, E. S., Kilpatrick, S. T. & Goldstein, E. S. (eds.). 10th ed ed. Sudbury, Mass. : Jones and Bartlett Publishers, p. 282-298 16 p. (Jones and Bartlett books in computer science).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Education

  16. Published

    Sequence and comparative analysis of Lactococcus lactis c2 dairy bacteriphages with different thermal inactivation

    Vogensen, Finn Kvist, Nielsen, C. L. M., Bashir, A., Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Heller, K. J., Sørensen, Søren Johannes & Knoechel, Susanne, Aug 2011.

    Research output: Contribution to conference › Poster › Research

  17. 2010
  18. Published

    New ecological niches and habitats for Chlorophyll d- containing cyanobacteria

    Behrendt, L., Chen, M., Larkum, A. W. D., Ralph, P. J., Sørensen, Søren Johannes, Trampe, E. & Kühl, Michael, 2010.

    Research output: Contribution to conference › Poster › Research

  19. Published

    A highly selective quantitative polymerase chain reactionprotocol for Burkholderia and Pseudomonas bacteria tested in soil

    Bergmark, L., Burmølle, Mette, Hansen, Lars Hestbjerg, Abu Al-Soud, W. & Sørensen, Søren Johannes, Aug 2010.

    Research output: Contribution to conference › Poster › Research

  20. Published

    Biofilms in chronic infections - a matter of opportunity - monospecies biofilms in multispecies infections

    Burmølle, Mette, Thomsen, T. R., Fazli, M., Dige, I., Christensen, L., Homøe, Preben, Tvede, M., Nyvad, B., Tolker-Nielsen, Tim, Givskov, Michael, Moser, Claus Ernst, Kirketerp-Møller, K., Johansen, Helle Krogh, Høiby, Niels, Jensen, Peter Østrup, Sørensen, Søren Johannes & Bjarnsholt, Thomas, 2010, In: FEMS Immunology and Medical Microbiology. 59, 3, p. 324-336 13 p.

    Research output: Contribution to journal › Review › Research › peer-review

  21. Published

    The nitrogenase gene pool in surface waters of the global ocean is dominated by genes of non-cyanobacteria

    Farnelid, H., Andersson, A., Bertilsson, S., Abu Al-Soud, W., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Hagström & Riemann, Lasse, 2010.

    Research output: Contribution to conference › Poster › Research

  22. Published

    Probing Barophilic Microbial Communities for Novel Proteolytic Enzymes

    Frank, J. A., Hansen, M. A. & Sørensen, Søren Johannes, May 2010.

    Research output: Contribution to conference › Poster › Research

  23. Published

    All equal, all different?

    Han, S., Lundin, L. & Sørensen, Søren Johannes, 2010.

    Research output: Contribution to conference › Poster › Research

  24. Published

    Bias in Nycodenz extraction from bulk soil analysed by amplicon high throughput sequencing

    Holmsgaard, P. N., Poulsen, P. H. B., Hede, S., Abu Al-Soud, W., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Aug 2010.

    Research output: Contribution to conference › Poster › Research

  25. Published

    Bias in Nycodenz extraction from bulk soil analysed by amplicon high throughput sequencing

    Holmsgaard, P. N., Poulsen, P., Hede, S., Abu Al-Soud, W., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Nov 2010.

    Research output: Contribution to conference › Poster › Research

  26. Published

    The effect of L. acidophilus NCFM intake on insulin sensitivity and gut microbiota: a randomized placebo-controlled trial

    Larsen, Nadja, Andreasen, A. S., Pedersen-Skovsgaard, T., Møller, K., van den Berg, F. W. J., Abu Al-Soud, W. M. A. F., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg, Nielsen, Dennis Sandris, Vogensen, Finn Kvist, Pedersen, Bente Klarlund & Jakobsen, M., Sep 2010.

    Research output: Contribution to conference › Conference abstract for conference › Research

  27. Published

    Gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults

    Larsen, Nadja, Vogensen, Finn Kvist, van der Berg, Franciscus Winfried J, Nielsen, Dennis Sandris, Andreasen, Anne Sofie, Pedersen, Bente Klarlund, Abu Al-Soud, W. M. A. F., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Jakobsen, M., 2010, In: PLoS ONE. 5, 2, p. e9085 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    The lactic acid bacterium, Carnobacterium maltaromaticum possess a diverse range of potential virulence genes some of which are related to similar genes in Listeria monocytogenes

    Leisner, Jørgen, Hansen, M. A., Larsen, M. H., Ingmer, Hanne, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2010.

    Research output: Contribution to conference › Poster › Research

  29. Published

    Diversity of cultural and uncultrural Pseudomonas in an Urban Waste Filed Trial

    Li, L., Bergmark, L., Abu Al-Soud, W., Hansen, Lars Hestbjerg, Norman, A. & Sørensen, Søren Johannes, Nov 2010.

    Research output: Contribution to conference › Poster › Research

  30. Published

    The Diversity of cultural and uncultrural Pseudomonas in an Urban Waste Field Trial

    Li, L., Bergmark, L., Abu Al-Soud, W., Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Aug 2010.

    Research output: Contribution to conference › Poster › Research

  31. Published

    The gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults

    Nielsen, Dennis Sandris, Larsen, Nadja, Vogensen, Finn Kvist, van den Berg, F. W. J., Andreasen, A. S., Pedersen, B. K., Abu Al-Soud, W. M. A. F., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Jakobsen, M., 2010. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  32. Published

    Metamobilomics - Expanding the environmental mobilome with high throughput sequencing

    Norman, A., Li, L., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Aug 2010.

    Research output: Contribution to conference › Poster › Research

  33. Published

    Centre for Anti-resistance; Limiting the occurrence of antimicrobial resistance through targeted interventions directed at plasmid transfer and stability

    Riber, Leise, Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2010.

    Research output: Contribution to conference › Poster › Research

  34. 2009
  35. Published

    All IncP-1 plasmid subgroups, including the novel e subgroup, are prevalent in the influent of a Danish wastewater treatment plant

    Bahl, M. I., Burmølle, Mette, Meisner, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2009, In: Plasmid. 62, 2, p. 134-139 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Construction and Use of Flow Cytometry Optimized Plasmid-Sensor Strains: Genomes in Flux

    Bahl, M. I., Oregaard, G., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2009, Horizontal Gene Transfer. Gogarten, M. B., Gogarten, J. P. & Olendzenski, L. C. (eds.). Humana Press, Vol. 532. p. 257-268 (Methods in Molecular Biology).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  37. Published

    Persistence Mechanisms of Conjugative Plasmids

    Bahl, M. I., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2009, Horizontal Gene Transfer: Genomes in Flux. Gogarten, M. B., Gogarten, J. P. & Olendzenski, L. C. (eds.). Humana Press, Vol. 532. p. 73-102 (Methods in Molecular Biology).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  38. Published

    The presence of embedded bacterial pure cultures in agar plates stimulate the culturability of soil bacteria.

    Burmølle, Mette, Johnsen, K., Abu Al-Soud, W. M. A. F., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2009, In: Journal of Microbiological Methods. 79, 2, p. 166-173 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Conjugative plasmids: Vessels of the communal gene pool

    Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2009, In: Philosophical Transactions of the Royal Society of London. Biological Sciences. 364, 1527, p. 2275-2289 15 p.

    Research output: Contribution to journal › Review › Research › peer-review

  40. Published

    Investigation of prokaryotic diversity in an urban waste field trial by high throughput sequencing

    Poulsen, P. H. B., Abu Al-Soud, W., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2009. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  41. Published

    Investigation of prokaryotic diversity in an urban waste field trial by high throughput sequencing

    Poulsen, P. H. B., Abu Al-Soud, W., Hansen, Lars Hestbjerg, Magid, Jakob & Sørensen, Søren Johannes, 2009. 1 p.

    Research output: Contribution to conference › Poster › Research

  42. 2008
  43. Published

    Type 3 fimbriae, encoded by the conjugative plasmid pOLA52, enhance biofilm formation and transfer frequencies in Enterobacteriaceae strains

    Burmølle, Mette, Bahl, M. I., Jensen, L. B., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2008, In: Microbiology. 154, Pt 1, p. 187-95 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Characterisation, dissemination and persistence of gentamicin resistant Escherichia coli from a Danish university hospital to the waste water environment

    Jakobsen, L., Sandvang, D., Hansen, Lars Hestbjerg, Bagger-Skjøt, L., Westh, Henrik T., Jørgensen, C., Hansen, D. S., Pedersen, B. M., Monnet, D. L., Frimodt-Møller, N., Sørensen, Søren Johannes & Hammerum, A. M., 2008, In: Environment International. 34, 1, p. 108-15 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Nucleotide sequence of pOLA52: a conjugative IncX1 plasmid from Escherichia coli which enables biofilm formation and multidrug efflux

    Norman, A., Hansen, Lars Hestbjerg, She, Q. & Sørensen, Søren Johannes, 2008, In: Plasmid. 60, 1, p. 59-74 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Cultivation of hard-to-culture subsurface mercury-resistant bacteria and discovery of new merA gene sequences

    Rasmussen, L. D., Zawadsky, C., Binnerup, S. J., Øregaard, G., Sørensen, Søren Johannes & Kroer, Niels, 2008, In: Applied and Environmental Microbiology. 74, 12, p. 3795-803 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Acclimation of subsurface microbial communities to mercury

    de Lipthay, J. R., Rasmussen, L. D., Øregaard, G., Simonsen, K., Bahl, M. I., Kroer, Niels & Sørensen, Søren Johannes, 2008, In: FEMS Microbiology Ecology. 65, 1, p. 145-55 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. 2007
  49. Published

    Conjugative transfer facilitates stable maintenance of IncP-1 plasmid pKJK5 in Escherichia coli cells colonizing the gastrointestinal tract of the germfree rat

    Bahl, M. I., Hansen, Lars Hestbjerg, Licht, T. & Sørensen, Søren Johannes, 2007, In: Applied and Environmental Microbiology. 73, 1, p. 341-343

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Impact of conjugal transfer on the stability of IncP-1 plasmid pKJK5 in bacterial populations

    Bahl, M. I., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2007, In: FEMS Microbiology Letters. 266, p. 250-256

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    The multiple antibiotic resistance IncP-1 plasmid pKJK5 isolated from a soil environment is phylogenetically divergent from members of the previously established a, ß and d sub-groups

    Bahl, M. I., Hansen, Lars Hestbjerg, Goesmann, A. & Sørensen, Søren Johannes, 2007, In: Plasmid. 58, 1, p. 31-43

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Establishment and early succession of a multispecies biofilm composed of soil bacteria

    Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2007, In: Microbial Ecology. 54, 2, p. 352-62 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    Substrate specificity of the OqxAB multidrug resistance pump in Escherichia coli and selected enteric bacteria

    Hansen, Lars Hestbjerg, Jensen, L. B., Sørensen, H. I. & Sørensen, Søren Johannes, 2007, In: Journal of Antimicrobial Chemotherapy. 60, 1, p. 145-147

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    The cda GenoTox assay: A new sensitive method for detection of environmental genotoxins, including nitroarenes and aromatic amines

    Østergaard, T. G., Hansen, Lars Hestbjerg, Binderup, M., Norman, A. & Sørensen, Søren Johannes, 2007, In: Mutation Research - Reviews. 631, 2, p. 77-84

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. 2006
  56. Published

    Enhanced Biofilm Formation and Increased Resistance to Antimicrobial Agents and Bacterial Invasion Are Caused by Synergistic Interactions in Multispecies Biofilms

    Burmølle, Mette, Webb, J. S., Rao, D., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Kjelleberg, S., 2006, In: Applied and Environmental Microbiology. 72, 6, p. 3916-3923

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    Reporter Geneechnology in Soil Ecology; Detection of Bioavailability and Microbial Interactions

    Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2006, Nucleic Acids and Proteins in Soil. Tyskland: Springer, p. 397-419

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  58. Published

    Determination of the genetic background for resistance to olaquindox, a Gram-negative growth promoter

    Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Jensen, L. B., 2006, In: DANMAP 2005 - July 2006. p. 100-100 1 p.

    Research output: Contribution to journal › Journal article › Research

  59. Published

    Microbial degradation of street dust polycyclic aromatic hydrocarbons in microcosms simulating diffuse pollution of urban soil.

    Johnsen, A. R., de Lipthay, J. R., Sørensen, Søren Johannes, Ekelund, Flemming, Christensen, P., Andersen, O., Karlson, U. & Jacobsen, C. S., 2006, In: Environmental Microbiology. 8, 3, p. 535-45 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    Biodegradation, bioaccessibility and genotoxicity of diffuse polycyclic aromatic hydrocarbon (PAH) pollution at a motorway site

    Johnson, A. R., Lipthay, J. R. D., Reichenberg, F., Sørensen, Søren Johannes, Andersen, O., Christensen, P., Binderup, M. & Jacobsen, C. S., 2006, In: Environmental Science & Technology (Washington). 40, 10, p. 3293-3298

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Cultivation-independent examination of horizontal transfer and host range of an IncP-1 plasmid among gram-positive and gram-negative bacteria indigenous to the barley rhizosphere

    Musovic, S., Oregaard, G., Kroer, Niels & Sørensen, Søren Johannes, 2006, In: Applied and Environmental Microbiology. 72, 10, p. 6687-6692 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    A flow cytometry-optimized assay using an SOS-green fluorescent protein (SOS-GFP) whole-cell biosensor for the detection of genotoxins in complex environments

    Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2006, In: Mutation Research - Reviews. 603, 2, p. 164-172 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Biosensors to Monitor Soil Health or Toxicity

    Poulsen, P. H., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2006, Modern Soil Microbiology. van Elsas, J. D., Jansson, J. K. & Trevors, J. T. (eds.). 2nd ed. Boca Raton, FL: CRC Press, p. 435-454

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  64. Published

    Mineralisation of 2,6-dichlorobenzamide (BAM) in dichlobenil-exposed soils and isolation of a BAM-mineralising Aminobacter sp.

    Simonsen, A., Holtze, M. S., Sørensen, S. R., Sørensen, Søren Johannes & Aamund, J., 2006, In: Environmental Pollution. 144, 1, p. 289-295

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    Making bio-sense of toxicity: new developments in whole-cell biosencors

    Sørensen, Søren Johannes, Burmølle, Mette & Hansen, Lars Hestbjerg, 2006, In: Current Opinion in Biotechnology. 17, 1, p. 11-16

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. 2005
  67. Published

    Construction of an extended range whole-cell tetracycline biosensor by use of the tet(M) resistance gene

    Bahl, M. I., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2005, In: FEMS Microbiology Letters. 253, 2, p. 201-205

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Published

    Monitoring and evaluating soil quality

    Bloem, J., Schouten, A. J., Sørensen, Søren Johannes, Rutgers, M., van der Werf, A. & Breuer, A. M., 2005, Microbiological methods for assessing soil quality. p. .

    Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

  69. Published

    Use of a Whole-Cell Biosensor and Flow Cytometry to Detect AHL Production by an Indigenous Soil Community During Decomposition

    Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2005, In: Microbial Ecology. 50, 2, p. 221-229

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    The Prevalence of the OqxAB Multidrug Efflux Pump amongst Olaquindox-Resistant Escherichia coli in Pigs

    Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Jørgensen, H. S. & Jensen, L. B., 2005, In: Microbial Drug Resistance. 11, 4, p. 378-382

    Research output: Contribution to journal › Journal article › Research › peer-review

  71. Published

    Construction of a ColD cda Promoter-Based SOS-Green Fluorescent Protein Whole-Cell Biosensor with Higher Sensitivity toward Genotoxic Compounds than Constructs Based on recA, umuDC, or sulA Promoters

    Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2005, In: Applied and Environmental Microbiology. 71, 5, p. 2338-2346

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    Studying plasmid horizontal transfer in situ: a critical review

    Sørensen, Søren Johannes, Bailey, M., Hansen, Lars Hestbjerg, Kroer, Niels & Wuertz, S., 2005, In: Nature Reviews. Microbiology. 3, 9, p. 700-710

    Research output: Contribution to journal › Review › Research

  73. 2004
  74. Published

    In Vivo Detection and Quantification of Tetracycline by Use of a Whole-Cell Biosensor in the Rat Intestine

    Bahl, M. I., Hansen, Lars Hestbjerg, Licht, T. R. & Sørensen, Søren Johannes, 2004, In: Antimicrobial Agents and Chemotherapy. 48, 4, p. 1112-1117

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    Effect of Tetracycline on Transfer and Establishment of the Tetracycline-Inducible Conjugative Transposon Tn916 in the Guts of Gnotobiotic Rats

    Bahl, M. I., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Licht, T. R., 2004, In: Applied and Environmental Microbiology. 70, 2, p. 758-764

    Research output: Contribution to journal › Journal article › Research › peer-review

  76. Published

    Quantification of plasmid loss in Escherichia coli cells by use of flow cytometry

    Bahl, M. I., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2004, In: FEMS Microbiology Letters. 232, 1, p. 45-49

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    Recovery of GFP-labeled bacteria for culturing and molecular analysis after cell sorting using a benchtop flow cytometer

    Ferrari, B. C., Øregaard, G. & Sørensen, Søren Johannes, 2004, In: Microbial Ecology. 48, p. 239-245

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    Plasmid Encoded Multidrug Efflux Pump Conferring Resistance to Olaquindox in Escherichia coli

    Hansen, Lars Hestbjerg, Johannesen, E., Burmølle, Mette, Sørensen, A. H. & Sørensen, Søren Johannes, 2004, In: Antimicrobial Agents and Chemotherapy. 48, 9, p. 3332-3337

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Published

    Impact of dna extraction method on bacterial community composition measured by denaturing gradient gel electrophoresis

    Lipthay, J. R. D., Enzinger, C., Johnsen, K., Aamand, J. & Sørensen, Søren Johannes, 2004, In: Soil Biology & Biochemistry. 36, p. 1607-1614

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    Application of whole-cell biosensors in soil

    Sørensen, Søren Johannes, Hansen, Lars Hestbjerg, Burmølle, Mette, Oregaard, G. & Hermansen, P., 2004, Molecular Microbial Ecology Manual. Kowalchuk, G. A., de Bruijn, F. J., Head, I. M., Akkermans, A. D. L. & van Elsas, J. D. (eds.). 2. ed ed. Kluwer Academic Publishers, p. 1613-1628 8.03

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  81. Published

    Plasmid transfer in aquatic environments. Molecular Microbial Ecology Manual

    Sørensen, Søren Johannes (ed.), Øregaard, G. (ed.), De Lipthay, J. R. (ed.) & Kroer, Niels (ed.), 2004, The Netherlands: Kluwer Academic Publishers.

    Research output: Book/Report › Book › Research

  82. Published

    Single cell flow cytometry analysis of gene transfer from E. coli to indigenous freshwater bacteria reveals an up to 100 fold higher transfer, than determined by selective culturing

    Øregaard, G. & Sørensen, Søren Johannes, 2004

    Research output: Other contribution › Communication

  83. 2003
  84. Published

    In vivo detection and quantification of tetracycline by use of a whole-cell biosensor in the intestine of rats

    Bahl, M. I., Hansen, L. H., Licht, T. R. & Sørensen, Søren Johannes, 2003, In: Antimicrobial Agents and Chemotherapy. ., p. .

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    Effect of tetracycline on transfer and establishment of the tetracycline-inducible conjugative transposon Tn916 in the gut of gnotobiotic rats

    Bahl, M. I., Sørensen, Søren Johannes, Hansen, L. H. & Licht, T. R., 2003, In: Applied and Environmental Microbiology. ., p. .

    Research output: Contribution to journal › Journal article › Research › peer-review

  86. Published

    Presence of N-acyl Homoserine Lactones in Soil Detected by a Whole-Cell Biosensor and Flow Cytometry

    Burmølle, Mette, Hansen, Lars Hestbjerg, Oregaard, G. & Sørensen, Søren Johannes, 2003, In: Microbial Ecology. 45, 3, p. 226-236 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    Conjugative Plasmid Conferring Resistance to Olaquindox

    Sørensen, A. H., Hansen, Lars Hestbjerg, Johannesen, E. & Sørensen, Søren Johannes, 2003, In: Antimicrobial agents and Chemotheraphy. 47, 2, p. 798-799 2 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    Direct Detection and Quantification of Horizontal Gene Transfer Using Flow Cytometry and gfp as a Reporter Gene

    Sørensen, Søren Johannes, Sørensen, A. H., Hansen, Lars Hestbjerg, Oregaard, G. & Veal, D., 2003, In: Current Microbiology. 47, 2, p. 129-133 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    The mycorrhizal fungus (Glomus intraradices) affects microbial activity in the rhizosphere of pea plants (Pisum sativum)

    Wamberg, C., Christensen, Søren, Jakobsen, I., Müller, A. K. & Sørensen, Søren Johannes, 2003, In: Soil Biology & Biochemistry. Vol. 35, issue 10, p. 1349-1357

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. 2002
  91. Published

    Inducible Gene Expression by non-culturable bacteria in milk after pasterurization

    Gunasekera, T. S., Atfield, A. H., Sørensen, Søren Johannes & Veal, D., 2002, In: Applied and Environmental Microbiology. 68(4), p. 1988-1994

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    Quantification of bioavailable chlortetracycline in pig feces using a bacterial whole-cell biosensor

    Hansen, Lars Hestbjerg, Aarestrup, F. & Sørensen, Søren Johannes, 2002, In: Veterinary Microbiology. 87, 1, p. 51-57

    Research output: Contribution to journal › Journal article › Research › peer-review

  93. Published

    The diversity, structure and function of soil microbial communities exposed to different disturbances

    Müller, A. K., Westergaard, K., Christensen, S. & Sørensen, Søren Johannes, 2002, In: Microbial Ecology. 44, p. 49-58

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    Molecular methods for assessing and manipulating the diversity of microbial populations and processes

    Sørensen, Søren Johannes, de Lipthay, J. R., Müller, A. K., Barkay, T., Hansen, Lars Hestbjerg & Rasmussen, L. D., 2002, Enzymes in the Environment: Activity, Ecology, and Applications. Burns, R. G. & Dick, R. P. (eds.). Marcel Dekker, 363 p. (Books in soils, plants, and the environment).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  95. 2001
  96. Published

    An examination of the biodiversity-ecosystem function relationship in arable soil microbial communities

    Griffiths, B. S., Ritz, K., Wheatley, R., Kuan, H. L., Boag, B., Christensen, Søren, Ekelund, Flemming, Sørensen, Søren Johannes, Muller, S. & Bloem, J., 2001, In: Soil Biology & Biochemistry. 33, 12-13, p. 1713-1722

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    The use of whole-cell biosensors to detect and quantify compounds or conditions affecting biological systems

    Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2001, In: Microbial Ecology. 42, 4, p. 483-494

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Detection of Oxytetracycline production by Streptomyces rimosus in soil microcosms by combining whole-cell biosensors and flow cytometry

    Hansen, Lars Hestbjerg, Ferrari, B., Sørensen, A. H., Veal, D. & Sørensen, Søren Johannes, 2001, In: Applied and Environmental Microbiology. 67, 1, p. 239-244

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Enhanced degradation of phenoxyacetic acid in soil by horizontal transfer of the tfdA gene encoding a 2,4-dichlorophenoxyacetic acid dioxygenase

    Lipthay, J. R. D., Barkay, T. & Sørensen, Søren Johannes, 2001, In: FEMS Microbiology Ecology. 35, p. 75-84

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    The Effect of Long Term Mercury Pollution on the Soil Microbial Community

    Müller, A. K., Westergaard, K., Christensen, Søren & Sørensen, Søren Johannes, 2001, In: FEMS Microbiology Ecology. 36, 1, p. 11-19

    Research output: Contribution to journal › Journal article › Research › peer-review

  101. Published

    Adaptation of the bacterial community to heavy metal contamination

    Müller, A. K., Rasmussen, L. D. & Sørensen, Søren Johannes, 2001, In: FEMS Microbiology Letters. 205, p. 49-53

    Research output: Contribution to journal › Journal article › Research

  102. Published

    Group-specific PCR primers to amplify 24S α-subunit rRNA genes from Kinetoplastida (Protozoa) used in denaturing gradient gel electrophoresis

    Rasmussen, L. D., Ekelund, Flemming, Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Johnsen, K., 2001, In: Microbial Ecology. 42, 2, p. 109-115

    Research output: Contribution to journal › Journal article › Research › peer-review

  103. Published

    Effects of mercury contimanation on the culturable heterotrophic, functional and genetic diversity of the bacterial community in soil

    Rasmussen, L. D. & Sørensen, Søren Johannes, 2001, In: FEMS Microbiology Ecology. 36, p. 1-9

    Research output: Contribution to journal › Journal article › Research › peer-review

  104. Published

    Effect of genomic location on horizontal transfer of a recombinant gene cassette between Pseudomonas strains in the rhizosphere and spermosphere of barley seedlings

    Sengeløv, G., Kristensen, K. J., Sørensen, A. M. H., Kroer, Niels & Sørensen, Søren Johannes, 2001, In: Current Microbiology. 42, p. 160-167

    Research output: Contribution to journal › Journal article › Research › peer-review

  105. 2000
  106. Published

    Ecosystem response of pasture soil communities to fumigation-induced microbial diversity reductions: an examination of the biodiversity-ecosystem function relationship

    Griffiths, B. S., Ritz, K., Bardgett, R. D., Cook, R., Christensen, Søren, Ekelund, Flemming, Sørensen, Søren Johannes, Bååth, E., Bloem, J., De Ruiter, P. C., Dolfing, J. & Nicolardot, B., 2000, In: Oikos. 90, 2, p. 279-294

    Research output: Contribution to journal › Journal article › Research › peer-review

  107. Published

    Detection and quantification of tetracyclines by whole cell biosensors

    Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2000, In: FEMS Microbiology Letters. 190, 2, p. 273-278

    Research output: Contribution to journal › Journal article › Research › peer-review

  108. Published

    Versatile biosensor vectors for detection and quantification of mercury

    Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2000, In: FEMS Microbiology Letters. 193, 1, p. 123-127

    Research output: Contribution to journal › Journal article › Research › peer-review

  109. Published

    Application of a mer-lux biosensor for estimating bioavailable mercury in soil

    Rasmussen, L. D., Sørensen, Søren Johannes, Turner, R. R. & Barkay, T., 2000, In: Soil Biology & Biochemistry. 32, 5, p. 639-646

    Research output: Contribution to journal › Journal article › Research › peer-review

  110. Published

    A new method for determining the metabolic activity of specific bacterial populations in soil using tritiated leucine and immunomagnetic separation

    Sengeløv, G., Sørensen, Søren Johannes, Frette, L. & Kroer, Niels, 2000, In: Biology and Fertility of Soils. 32, 3, p. 202-208

    Research output: Contribution to journal › Journal article › Research › peer-review

  111. Published

    Influence of fungal-bacterial interactions on bacterial conjugation in the residuesphere

    Sengeløv, G., Kowalchuk, G. A. & Sørensen, Søren Johannes, 2000, In: FEMS Microbiology Ecology. 31, p. 39-45

    Research output: Contribution to journal › Journal article › Research › peer-review

  112. 1999
  113. Published

    Predation by protozoa on Escherichia coli K12 in soil and transfer of resistance plasmid RP4 to indigenous bacteria in soil

    Sørensen, Søren Johannes, Schyberg, T. & Rønn, Regin, 1999, In: Appl. Soil Ecol.. 11, p. 79-90

    Research output: Contribution to journal › Journal article › Research › peer-review

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