Søren Johannes Sørensen

Søren Johannes Sørensen

Professor


  1. 2013
  2. Published

    A low-cost, multiplexable, automated flow cytometry procedure for the characterization of microbial stress dynamics in bioreactors

    Brognaux, A., Han, S., Sørensen, Søren Johannes, Lebeau, F., Thonart, P. & Delvigne, F., 2013, In: Microbial Cell Factories. 12, 100, 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    A spatiotemporal view of plasmid loss in biofilms and planktonic cultures: [plus] Erratum

    Madsen, Jonas Stenløkke, Burmølle, Mette & Sørensen, Søren Johannes, 2013, In: Biotechnology and Bioengineering (Print). 110, 12, p. 3071-3074 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    Adaptation and heterogeneity of Escherichia coli MC1000 growing in complex environments

    Puentes-Téllez, P., Hansen, M. A., Sørensen, Søren Johannes & van Elsas, J., 2013, In: Applied and Environmental Microbiology. 79, 3, p. 1008-1017 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Bacterial chitinolytic communities respond to chitin and pH alteration in soil

    Kielak, A., Cretoiu, M., Semenov, A., Sørensen, Søren Johannes & van Elsas, J., 2013, In: Applied and Environmental Microbiology. 79, 1, p. 263-272 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Bacterial community structure in High-Arctic snow and freshwater as revealed by pyrosequencing of 16S rRNA genes and cultivation

    Møller, A. K., Søborg, D. A., Abu Al-Soud, W., Sørensen, Søren Johannes & Kroer, Niels, 2013, In: Polar Research. 32, 11 p., 17390.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Cell mass and cell cycle dynamics of an asynchronous budding yeast population: Experimental observations, flow cytometry data analysis, and multi-scale modeling

    Lencastre Fernandes, R., Carlquist, M., Neves Lundin, A. L., Heins, A., Dutta, A., Sørensen, Søren Johannes, Jensen, R. A., Nopens, I., Eliasson Lantz, A. & Gernaey, K., 2013, In: Biotechnology and Bioengineering (Print). 110, 3, p. 812-826 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    Complete genome sequence of the cystic fibrosis pathogen Achromobacter xylosoxidans NH44784-1996 complies with important pathogenic phenotypes

    Jakobsen, T. H., Hansen, M. A., Jensen, P. Ø., Hansen, L., Riber, L., Cockburn, A. P. I., Kolpen, M., Hansen, C. R., Ridderberg, W., Eickhardt-Sørensen, S. R., Hansen, M., Kerpedjiev, P., Alhede, M., Qvortrup, K., Burmølle, M., Moser, C. E., Kühl, M., Ciofu, O., Givskov, M., Sørensen, S. J. & 2 others, Høiby, Niels & Bjarnsholt, Thomas, 2013, In: P L o S One. 8, 7, 17 p., e68484.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Design of growth-dependent biosensors based on destabilized GFP for the detection of physiological behavior of Escherichia coli in heterogeneous bioreactors

    Han, S., Delvigne, F., Brognaux, A., Charbon, G. E. & Sørensen, Søren Johannes, 2013, In: Biotechnology Progress. 29, 2, p. 553-563 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Effects of fertilization with urban and agricultural organic wastes in a field trial – Prokaryotic diversity investigated by pyrosequencing

    Poulsen, P. H. B., Abu Al-Soud, W., Bergmark, L., Magid, Jakob, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2013, In: Soil Biology & Biochemistry. 57, p. 784-893 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Investigating the diversity of Pseudomonas spp. in soil using culture dependent and independent techniques

    Li, L., Abu Al-Soud, W., Bergmark, L., Riber, Leise, Hansen, Lars Hestbjerg, Magid, Jakob & Sørensen, Søren Johannes, 2013, In: Current Microbiology. 67, 4, p. 423-430 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Investigation of the relationship between lactococcal host cell wall polysaccharide genotype and 936 phage receptor binding protein phylogeny

    Mahony, J., Kot, Witold, Murphy, J., Ainsworth, S., Neve, H., Hansen, Lars Hestbjerg, Heller, K. J., Sørensen, Søren Johannes, Hammer, K., Cambillau, C., Vogensen, Finn Kvist & Sinderen, D. V., 2013, In: Applied and Environmental Microbiology. 79, 14, p. 4385-4392 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Microbial diversity and PAH catabolic genes tracking spatial heterogeneity of PAH concentrations

    Bengtsson, G., Törneman, N., Lipthay, J. R. D. & Sørensen, Søren Johannes, 2013, In: Microbial Ecology. 65, 1, p. 91-100 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Simultaneous pyrosequencing of the 16S rRNA, IncP-1 trfA, and merA genes

    Holmsgaard, P. N., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2013, In: Journal of Microbiological Methods. 95, 2, p. 280-284 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Specificity and stability of the Acromyrmex–Pseudonocardia symbiosis

    Andersen, Sandra Breum, Hansen, Lars Hestbjerg, Sapountzis, P., Sørensen, Søren Johannes & Boomsma, Jacobus J., 2013, In: Molecular Ecology. 22, 16, p. 4307-4321 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    The ability of soil bacteria to receive the conjugative IncP1 plasmid, pKJK10, is different in a mixed community compared to single strains

    de la Cruz Perera, C. I., Ren, D., Blanchet, M., Dendooven, L., Marsch, R., Sørensen, Søren Johannes & Burmølle, Mette, 2013, In: F E M S Microbiology Letters. 338, 1, p. 95-100 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    The impact of the conjugative IncP-1 plasmid pKJK5 on multispecies biofilm formation is dependent on the plasmid host

    Røder, Henriette Lyng, Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Burmølle, Mette, 2013, In: F E M S Microbiology Letters. 344, 2, p. 186-192 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    The murine lung microbiome in relation to the intestinal and vaginal bacterial communities

    Barfod, K. K., Roggenbuck, M., Hansen, Lars Hestbjerg, Schjørring, S., Larsen, S. T., Sørensen, Søren Johannes & Krogfelt, K. A., 2013, In: B M C Microbiology. 13, 12 p., 303.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. 2014
  20. Published

    An improved method for including upper size range plasmids in metamobilomes

    Norman, A., Riber, Leise, Luo, W., Li, L., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2014, In: PLoS ONE. 9, 8, 12 p., e104405.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Bioinformatic approaches reveal metagenomic characterization of soil microbial community

    Xu, Z., Hansen, M. A., Hansen, Lars Hestbjerg, Jacquiod, S. J. A. & Sørensen, Søren Johannes, 2014, In: P L o S One. 9, 4, 11 p., e93445.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Characterization of the gut microbiota in leptin deficient obese mice: correlation to inflammatory and diabetic parameters

    Ellekilde, M., Krych, Lukasz, Hansen, Camilla Hartmann Friis, Hufeldt, M. R., Dahl, K., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Vogensen, Finn Kvist, Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2014, In: Research in Veterinary Science. 96, 2, p. 241-250 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Complete genome sequences of four novel Lactococcus lactis phages distantly related to the Rare 1706 Phage Species

    Kot, Witold, Neve, H., Vogensen, Finn Kvist, Heller, K. J., Sørensen, Søren Johannes & Hansen, L. H., 2014, In: Genome Announcements. 2, 4, 2 p., e00265-14.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    DPS - a rapid method for genome sequencing of DNA-containing bacteriophages directly from a single plaque

    Kot, Witold, Vogensen, Finn Kvist, Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2014, In: Journal of Virological Methods. 196, p. 152-156 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Draft genome sequence of Burkholderia sordidicola S170, a potential plant growth promoter isolated from coniferous forest soil in the Czech Republic

    Lladó, S., Xu, Z., Sørensen, Søren Johannes & Baldrian, P., 2014, In: Genome Announcements. 2, 4, 2 p., e00810-14.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Exploring the immediate and long-term impact on bacterial communities in soil amended with animal and urban organic waste fertilizers using pyrosequencing and screening for horizontal transfer of antibiotic resistance

    Riber, Leise, Poulsen, P. H. B., Abu Al-Soud, W., Hansen, L. B. S., Bergmark, L., Brejnrod, A. D., Norman, A., Hansen, Lars Hestbjerg, Magid, Jakob & Sørensen, Søren Johannes, 2014, In: F E M S Microbiology Ecology. 90, 1, p. 206-224 19 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    Genome sequence of Leuconostoc mesenteroides subsp. cremoris strain T26, isolated from mesophilic undefined cheese starter

    Pedersen, T. B., Kot, Witold, Hansen, L. H., Sørensen, Søren Johannes, Broadbent, J. R., Vogensen, Finn Kvist & Ardö, Ylva Margareta, 2014, In: Genome Announcements. 2, 3, 1 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

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