Søren Johannes Sørensen

Søren Johannes Sørensen

Professor

ORCID: 0000-0001-6227-9906

Publication year:
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101 - 150 out of 411Page size: 50
  1. 2011
  2. Published

    Characterization of pIC13_78, a biofilm enabling plasmid

    Madsen, Jonas Stenløkke, Norman, A., Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2011.

    Research output: Contribution to conference › Poster › Research

  3. Published

    Construction of biosensors to investigate physiological diversity in fermentation processes

    Han, S., Lundin, L. & Sørensen, Søren Johannes, 2011.

    Research output: Contribution to conference › Poster › Research

  4. Published

    Endolithic chlorophyll d-containing phototrophs

    Behrendt, L., Larkum, A. W. D., Norman, A., Qvortrup, Klaus, Chen, M., Ralph, P., Sørensen, Søren Johannes, Trampe, Erik & Kühl, Michael, 2011, In: I S M E Journal. 5, 6, p. 1072-6 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Experimental methods and modeling techniques for description of cell population heterogeneity

    Lencastre Fernandes, R., Nierychlo, M., Lundin, L., Pedersen, A. E., Tellez, P. E. P., Dutta, A., Carlquist, M., Bolic, A., Schäpper, D., Brunetti, A. C., Helmark, S., Heins, A-L., Jensen, A. D., Nopens, I., Rottwitt, K., Szita, N., Elsas, J. D. V., Nielsen, P. H., Martinussen, J., Sørensen, S. J. & 2 others, Eliasson Lantz, A. & Gernaey, K., 2011, In: Biotechnology Advances. 29, 6, p. 575-599 25 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Green fluorescent protein (GFP) leakage from microbial biosensors provides useful information for the evaluation of the scale-down effect

    Delvigne, F., Brognaux, A., Francis, F., Twizere, J., Gorret, N., Sørensen, Søren Johannes & Thonart, P., 2011, In: Biotechnology Journal. 6, 8, p. 968-978 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Investigation of diversity of plasmids carrying the blaTEM-52 gene

    Bielak, E. M., Bergenholtz, R. D., Jørgensen, M. S., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Hasman, H., 2011, In: Journal of Antimicrobial Chemotherapy. 66, 11, p. 2465-74 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Limiting the occurrence of antimicrobial resistance through targeted interventions directed at plasmid transfer and stability

    Riber, Leise, Charbon, G., Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2011.

    Research output: Contribution to conference › Poster › Research › peer-review

  9. Published

    Nitrogenase gene amplicons from global marine surface waters are dominated by genes of non-cyanobacteria

    Farnelid, H., Andersson, A. F., Bertilsson, S., Abu Al-Soud, W., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Steward, G. F., Hagström, Å. & Riemann, Lasse, 2011, In: P L o S One. 6, 4, p. e19223 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Predominant genera of fecal microbiota in children with atopic dermatitis are not altered by intake of probiotic bacteria Lactobacillus acidophilus NCFM and Bifidobacterium animalis subsp.lactis Bi-07

    Larsen, Nadja, Vogensen, Finn Kvist, Gøbel, R. J., Michaelsen, Kim F., Abu Al-Soud, W., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Jakobsen, M., 2011, In: FEMS Microbiology Ecology. 75, 3, p. 482-496 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Quantitative metagenomic analyses based on average genome size normalization

    Frank, J. A. & Sørensen, Søren Johannes, 2011, In: Applied and Environmental Microbiology. 77, 7, p. 2513-2521 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Sequence and comparative analysis of Leuconostoc dairy bacteriophages

    Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Hammer, K., Pedersen, P. D., Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2011. 1 p.

    Research output: Contribution to conference › Poster › Research

  13. Published

    Sequence and comparative analysis of Leuconostoc dairy bacteriophages

    Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Hammer, K., Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2011. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  14. Published

    Diversity and characterization of mercury-resistant bacteria in snow, freshwater and sea-ice brine from the High Arctic

    Møller, A., Barkay, T., Abu Al-Soud, W., Sørensen, Søren Johannes, Skov, H. & Kroer, Niels, 1 Mar 2011, In: F E M S Microbiology Ecology. 75, 3, p. 390-401 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Sequence of a SCCmec type VII (former VT) found in Danish ST8-t024-PVLneg CA-MRSA

    Boye, K., Pulis, S., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Westh, Henrik T., Apr 2011.

    Research output: Contribution to conference › Poster › Research

  16. Published

    Design and Synthesis of a Quintessential Self-Transmissible IncX1 Plasmid, pX1.0

    Hansen, Lars Hestbjerg, Bentzon-Tilia, M., Bentzon-Tilia, S., Norman, A., Rafty, L. & Sørensen, Søren Johannes, May 2011, In: P L o S One. 6, 5, 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Applicability of GFP microbial whole cell biosensors to bioreactor operations: mathematical modeling and related experimental tools

    Delvigne, F., Brognaux, A., Gorret, N., Sørensen, Søren Johannes, Michel, C. & Thonart, P., Jul 2011, Biosensors - Emerging Materials and Applications. Serra, P. A. (ed.). Rijeka, Croatia: InTech, p. 601-630 30 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  18. Published

    Bias in bacterial diversity as a result of Nycodenz extraction from bulk soil

    Holmsgaard, P. N., Norman, A., Hede, S. C., Poulsen, P. H. B., Al-Soud, W. A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 14 Jul 2011, In: Soil Biology & Biochemistry. 43, 10, p. 2152-2159 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Sequence and comparative analysis of Lactococcus lactis c2 dairy bacteriphages with different thermal inactivation

    Vogensen, Finn Kvist, Nielsen, C. L. M., Bashir, A., Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Heller, K. J., Sørensen, Søren Johannes & Knoechel, Susanne, Aug 2011.

    Research output: Contribution to conference › Poster › Research

  20. 2012
  21. Published

    454-sequencing reveals stochastic local reassembly and high disturbance tolerance within arbuscular mycorrhizal fungal communities

    Lekberg, K. Y. M., Schnoor, T., Kjøller, Rasmus, Gibbons, S. M., Hansen, Lars Hestbjerg, Abu Al-Soud, W., Sørensen, Søren Johannes & Rosendahl, Søren, 2012, In: Journal of Ecology. 100, 1, p. 151-160 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    An invisible workforce: biofilms in the soil

    Burmølle, Mette, Kjøller, Annelise Helene & Sørensen, Søren Johannes, 2012, Microbial biofilms: current research and applications. Lear, G. & Lewis, G. D. (eds.). Caister Academic Press, p. 61-71 11 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  23. Published

    Assessment of the specificity of Burkholderia and Pseudomonas qPCR assays for detection of these genera in soil using 454 pyrosequencing

    Bergmark, L., Poulsen, P. H. B., Abu Al-Soud, W., Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012, In: F E M S Microbiology Letters. 333, 1, p. 77-84 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Bacteria in the first void urine of urethritis patients and healthy controls analysed by 454 high throughput senquencing

    Ahrens, P., Frølund, M., Abu Al-Soud, W., Wikström, A., Lidbrink, P., Cullberg, M., Sørensen, Søren Johannes & Jensen, J. S., 2012.

    Research output: Contribution to conference › Poster › Research

  25. Published

    Biofilm growth and near infrared radiation-driven photosynthesis of the chlorophyll d-containing cyanobacterium Acaryochloris marina

    Behrendt, L., Schrameyer, V., Qvortrup, Klaus, Neves Lundin, A. L., Sørensen, Søren Johannes, Larkum, A. W. D. & Kühl, Michael, 2012, In: Applied and Environmental Microbiology. 78, 11, p. 3896-3904 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Culture-dependent and -independent investigations of microbial diversity on urinary catheters

    Xu, Y., Moser, Claus Ernst, Abu Al-Soud, W., Sørensen, Søren Johannes, Høiby, Niels, Nielsen, P. H. & Thomsen, T. R., 2012, In: Journal of Clinical Microbiology. 50, 12, p. 3901-3908 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    DGGE and Pyrosequencing characterization of microbial community and methane-metabolizing microorganisms in livestock slurry surface crusts

    Duan, Y. (., Abu Al-Soud, W., Sørensen, Søren Johannes, Elsgaard, L., Petersen, S. O. & Boon, N., 2012.

    Research output: Contribution to conference › Poster › Research

  28. Published

    Design and synthesis of a functional self-replicating, broad host range cloning vector from bits and bytes

    Riber, Leise, Norman, A., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2012.

    Research output: Contribution to conference › Poster › Research

  29. Published

    Draft Genome Sequence of the Soil Bacterium Burkholderia terrae Strain BS001, Which Interacts with Fungal Surface Structures

    Nazir, R., Hansen, M. A., Sørensen, Søren Johannes & van Elsas, J. D., 2012, In: Journal of Bacteriology. 194, 16, p. 4480-4481 2 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Early life treatment with vancomycin propagates Akkermansia muciniphila and reduces diabetes incidence in the NOD mouse

    Hansen, Camilla Hartmann Friis, Krych, Lukasz, Nielsen, Dennis Sandris, Vogensen, Finn Kvist, Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Buschard, K. & Hansen, Axel Kornerup, 2012, In: Diabetologia. 55, 8, p. 2285-2294 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Ecology and photobiology of chlorophyll d-containing cyanobacteria

    Kühl, Michael, Behrendt, L., Trampe, Erik, Sørensen, Søren Johannes, Chen, M., Qvortrup, K. & Larkum, A., 2012.

    Research output: Contribution to conference › Conference abstract for conference › Research

  32. Published

    Ecology and photobiology of chlorophyll d-containing cyanobacteria

    Kühl, Michael, Behrendt, L., Trampe, Erik, Sørensen, Søren Johannes, Chen, M., Qvortrup, Klaus & Larkum, A. W. D., 2012.

    Research output: Contribution to conference › Poster › Research

  33. Published

    Gut microbiota composition is correlated to grid floor induced stress and behavior in the BALB/c mouse

    Bendtsen, K. M. B., Krych, Lukasz, Sørensen, Dorte Bratbo, Pang, W., Nielsen, Dennis Sandris, Josefsen, K., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Hansen, Axel Kornerup, 2012, In: P L o S One. 7, 10, 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Heterogeneity in recombinant protein production

    Schalén, M., Johanson, T., Neves Lundin, A. L., Sørensen, Søren Johannes & Lantz, A. E., 2012, In: New Biotechnology. 29, Supplement, 0, p. S78 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  35. Published

    High robustness of soil bacteria and funghi to multifactorial climate change manipulations

    Bergmark, L., Haugwitz-Hardenberg-Reventlow, M. S., Sørensen, Søren Johannes & Priemé, Anders, 2012.

    Research output: Contribution to conference › Conference abstract for conference › Research

  36. Published

    Insight from the draft genome of Dietzia cinnamea P4 reveals mechanisms of survival in complex tropical soil habitats and biotechnology potential

    Procópio, L., Alvarez, V. M., Jurelevicius, D. A., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Cardoso, J. S., Pádula, M., Leitao, Á. C., Seldin, L. & van Elsas, J. D., 2012, In: Antonie van Leeuwenhoek: Journal of Microbiology. 101, 2, p. 289-302 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Limiting the occurrence of antimicrobial resistance through targeted interventions directed at plasmid stability

    Riber, Leise, Burmølle, Mette, Milani, S. M., Alm, M., Thomsen, P., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012.

    Research output: Contribution to conference › Poster › Research

  38. Published

    Metamobilomics — expanding our knowledge on the pool of plasmid encoded traits in natural environments using high-throughput sequencing

    Li, L., Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012, In: Clinical Microbiology and Infection. 18, Suppl. 4, p. 8-11 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Microbial diversity of biofilm communities in microniches associated with the didemnid ascidian Lissoclinum patella

    Behrendt, L., Larkum, A. W. D., Trampe, Erik, Norman, A., Sørensen, Søren Johannes & Kühl, Michael, 2012, In: I S M E Journal. 6, p. 1222-1237 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Mining of unexplored habitats for novel chitinases - chiA as a helper gene proxy in metagenomics

    Cretoiu, M. S., Kielak, A. M., Abu Al-Soud, W., Sørensen, Søren Johannes & van Elsas, J. D., 2012, In: Applied Microbiology and Biotechnology. 94, 5, p. 1347-1358 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Novel and conserved bacterial mercuric reductase genes (merA) and mercury resistance plasmids in High Arctic snow, freshwater and sea-ice brine

    Kroer, Niels, Møller, A., Barkay, T., Hansen, M. A., Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012.

    Research output: Contribution to conference › Poster › Research

  42. Published

    Permissiveness of soil microbial communities toward receipt of mobile genetic elements

    Musovic, S., Klümper, U., Neves Lundin, A. L., Sørensen, Søren Johannes & Smets, B. F., 2012.

    Research output: Contribution to conference › Conference abstract for conference › Research

  43. Published

    Physiological heterogeneities in microbial populations and implications for physical stress tolerance

    Carlqvist, M., Lencastre Fernandes, R., Helmark, S., Heins, A., Neves Lundin, A. L., Sørensen, Søren Johannes, Gernaey, K. & Eliasson Lantz, A., 2012, In: Microbial Cell Factories. 11, 94, 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing

    Zakrzewski, M., Goesmann, A., Jaenicke, S., Jünemann, S., Eikmeyer, F., Szczepanowski, R., Abu Al-Soud, W., Sørensen, Søren Johannes, Pühler, A. & Schlüter, A., 2012, In: Journal of Biotechnology. 158, 4, p. 248-258 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Selection for Cu-tolerant bacterial communities with altered composition, but unaltered richness, via long-term Cu exposure

    Berg, J., Brandt, Kristian Koefoed, Abu Al-Soud, W., Holm, Peter Engelund, Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Nybroe, O., 2012, In: Applied and Environmental Microbiology. 78, 20, p. 7438-7446 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Sequencing of IncX-plasmids suggests ubiquity of mobile forms of a biofilm-promoting gene cassette recruited from Klebsiella pneumoniae

    Burmølle, Mette, Norman, A., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2012, In: PLOS ONE. 7, 7, 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    The fate of indigenous microbiota, starter cultures, Escherichia coli, Listeria innocua and Staphylococcus aureus in Danish raw milk and cheeses determined by pyrosequencing and quantitative real time (qRT)-PCR

    Masoud, W. M. H., Vogensen, Finn Kvist, Lillevang, S., Abu Al-Soud, W., Sørensen, Søren Johannes & Jakobsen, M., 2012, In: International Journal of Food Microbiology. 153, 1-2, p. 192-202 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    The fate of mercury in Arctic terrestrial and aquatic ecosystems, a review

    Douglas, T. A., Loseto, L. L., Macdonald, R. W., Outridge, P., Dommergue, A., Poulain, A., Amyot, M., Barkay, T., Berg, T., Chételat, J., Constant, P., Evans, M., Ferrari, C., Gantner, N., Johnson, M. S., Kirk, J., Kroer, N., Larose, C., Lean, D., Nielsen, T. G. & 7 others, Poissant, L., Rognerud, S., Skov, H., Sørensen, Søren Johannes, Wang, F., Wilson, S. & Zdanowicz, C. M., 2012, In: Environmental Chemistry (Online). 9, 4, p. 321-355 35 p.

    Research output: Contribution to journal › Review › Research › peer-review

  49. Published

    The genome sequence of the lactic acid bacterium, Carnobacterium maltaromaticum ATCC 35586 encodes potential virulence factors

    Leisner, Jørgen, Hansen, M. A., Larsen, M. H., Hansen, L., Ingmer, Hanne & Sørensen, Søren Johannes, 2012, In: International Journal of Food Microbiology. 152, 3, p. 107-115 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    The interconnection between biofilm formation and horizontal gene transfer

    Madsen, Jonas Stenløkke, Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012, In: F E M S Immunology and Medical Microbiology. 65, 2, p. 183-195 13 p.

    Research output: Contribution to journal › Review › Research › peer-review

  51. Published

    When it makes sense to socialize whilst being on the move: A small EAL-domain containing protein, encoded on natural biofilm-promoting plasmids, triggers motility

    Madsen, Jonas Stenløkke, Riber, Leise, Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012.

    Research output: Contribution to conference › Poster › Research

  52. 2013
  53. Published

    454 pyrosequencing analyses of bacterial and archaeal richness in 21 full-scale biogas digesters

    Sundberg, C., Abu Al-Soud, W., Larsson, M., Alm, E., Yekta, S. S., Svensson, B. H., Sørensen, Søren Johannes & Karlsson, A., 2013, In: FEMS Microbiology Ecology. 85, 3, p. 612-626 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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