Søren Johannes Sørensen

Søren Johannes Sørensen

Professor

ORCID: 0000-0001-6227-9906

Publication year:
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1 - 26 out of 26Page size: 500
  1. 2014
  2. Published

    An improved method for including upper size range plasmids in metamobilomes

    Norman, A., Riber, Leise, Luo, W., Li, L., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2014, In: PLoS ONE. 9, 8, 12 p., e104405.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Bioinformatic approaches reveal metagenomic characterization of soil microbial community

    Xu, Z., Hansen, M. A., Hansen, Lars Hestbjerg, Jacquiod, S. J. A. & Sørensen, Søren Johannes, 2014, In: P L o S One. 9, 4, 11 p., e93445.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Characterization of the gut microbiota in leptin deficient obese mice: correlation to inflammatory and diabetic parameters

    Ellekilde, M., Krych, Lukasz, Hansen, Camilla Hartmann Friis, Hufeldt, M. R., Dahl, K., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Vogensen, Finn Kvist, Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2014, In: Research in Veterinary Science. 96, 2, p. 241-250 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Complete genome sequences of four novel Lactococcus lactis phages distantly related to the Rare 1706 Phage Species

    Kot, Witold, Neve, H., Vogensen, Finn Kvist, Heller, K. J., Sørensen, Søren Johannes & Hansen, L. H., 2014, In: Genome Announcements. 2, 4, 2 p., e00265-14.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    DPS - a rapid method for genome sequencing of DNA-containing bacteriophages directly from a single plaque

    Kot, Witold, Vogensen, Finn Kvist, Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2014, In: Journal of Virological Methods. 196, p. 152-156 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Draft genome sequence of Burkholderia sordidicola S170, a potential plant growth promoter isolated from coniferous forest soil in the Czech Republic

    Lladó, S., Xu, Z., Sørensen, Søren Johannes & Baldrian, P., 2014, In: Genome Announcements. 2, 4, 2 p., e00810-14.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Exploring the immediate and long-term impact on bacterial communities in soil amended with animal and urban organic waste fertilizers using pyrosequencing and screening for horizontal transfer of antibiotic resistance

    Riber, Leise, Poulsen, P. H. B., Abu Al-Soud, W., Hansen, L. B. S., Bergmark, L., Brejnrod, A. D., Norman, A., Hansen, Lars Hestbjerg, Magid, Jakob & Sørensen, Søren Johannes, 2014, In: F E M S Microbiology Ecology. 90, 1, p. 206-224 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Genome sequence of Leuconostoc mesenteroides subsp. cremoris strain T26, isolated from mesophilic undefined cheese starter

    Pedersen, T. B., Kot, Witold, Hansen, L. H., Sørensen, Søren Johannes, Broadbent, J. R., Vogensen, Finn Kvist & Ardö, Ylva Margareta, 2014, In: Genome Announcements. 2, 3, 1 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Genome sequences of two Leuconostoc pseudomesenteroides strains isolated from Danish dairy starter cultures

    Pedersen, T. B., Kot, Witold, Hansen, L. H., Sørensen, Søren Johannes, Broadbent, J. R., Vogensen, Finn Kvist & Ardö, Ylva Margareta, 2014, In: Genome Announcements. 2, 3, p. 2 e00484-14.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    High-throughput screening of multispecies biofilm formation and quantitative PCR-based assessment of individual species proportions, useful for exploring interspecific bacterial interactions

    Ren, D., Madsen, Jonas Stenløkke, de la Cruz Perera, C. I., Bergmark, L., Sørensen, Søren Johannes & Burmølle, Mette, 2014, In: Microbial Ecology. 68, 1, p. 146-154 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Host-specific microbial communities in three sympatric North Sea sponges

    Naim, M. A., Morillo, J. A., Sørensen, Søren Johannes, Abu Al-Soud, W., Smidt, H. & Sipkema, D., 2014, In: F E M S Microbiology Ecology. 90, 2, p. 390-403 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Hundreds of circular novel plasmids and DNA elements identified in a rat cecum metamobilome

    Jørgensen, T. S., Xu, Z., Hansen, M. A., Sørensen, Søren Johannes & Hansen, L. H., 2014, In: P L o S One. 9, 2, 9 p., e87924.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes

    Nielsen, H. B., Almeida, M., Juncker, A., Rasmussen, S., Li, J., Sunagawa, S., Plichta, D. R., Gautier, L., Pedersen, A. G., Le Chatelier, E., Pelletier, E., Bonde, I., Nielsen, T., Manichanh, C., Arumugam, M., Batto, J-M., dos Santos, M. B. Q., Blom, N., Borruel, N., Burgdorf, K. S. & 31 others, Boumezbeur, F., Casellas, F., Doré, J., Dworzynski, P., Guarner, F., Hansen, Torben, Hildebrand, F., Kaas, R. S., Kennedy, S., Kristiansen, Karsten, Kultima, J. R., Léonard, P., Levenez, F., Lund, O., Moumen, B., Le Paslier, D., Pons, N., Pedersen, Oluf Borbye, Prifti, E., Qin, J., Raes, J., Sørensen, Søren Johannes, Tap, J., Tims, S., Ussery, D., Yamada, T., Renault, P., Sicheritz-Pontén, T., Bork, P., Wang, J. & MetaHIT Consortium, M. C., 2014, In: Nature Biotechnology. 32, 8, p. 822–828 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Identifying the core microbial community in the gut of fungus-growing termites

    Otani, S., Mikaelyan, A., Nobre, T., Hansen, Lars Hestbjerg, Koné, N. A., Sørensen, Søren Johannes, Aanen, D. K., Boomsma, Jacobus J., Brune, A. & Poulsen, Michael, 2014, In: Molecular Ecology. 23, 18, p. 4631–4644 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Interactions in multispecies biofilms: do they actually matter?

    Burmølle, Mette, Ren, D., Bjarnsholt, Thomas & Sørensen, Søren Johannes, 2014, In: Trends in Microbiology. 22, 2, p. 84-91 8 p.

    Research output: Contribution to journal › Review › Research › peer-review

  17. Published

    Loss of microbial diversity in soils is coincident with reductions in some specialized functions

    Singh, B. K., Quince, C., Macdonald, C. A., Khachane, A., Thomas, N., Abu Al-Soud, W., Sørensen, Søren Johannes, He, Z., White, D., Sinclair, A., Crooks, B., Zhou, J. & Campbell, C. D., 2014, In: Environmental Microbiology. 16, 8, p. 2408-2420 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Mercuric reductase genes (merA) and mercury resistance plasmids in High Arctic snow, freshwater and sea-ice brine

    Møller, A. K., Barkay, T., Hansen, M. A., Norman, A., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Boyd, E. S. & Kroer, Niels, 2014, In: FEMS Microbiology Ecology. 87, 1, p. 52-63 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Metabolic variability in bioprocessing: implications of microbial phenotypic heterogeneity

    Delvigne, F., Zune, Q., Lara, A. R., Abu Al-Soud, W. & Sørensen, Søren Johannes, 2014, In: Trends in Biotechnology. 32, 12, p. 608-616 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Methanotrophs, methanogens and microbial community structure in livestock slurry surface crusts

    Duan, Y. F., Abu Al-Soud, W., Brejnrod, A. D., Sørensen, Søren Johannes, Elsgaard, L., Petersen, S. O. & Boon, N., 2014, In: Journal of Applied Microbiology. 117, 4, p. 1066-1078 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Rapid TaqMan-based quantification of chlorophyll d-containing cyanobacteria in the genus Acaryochloris

    Behrendt, L., Nielsen, J. L., Sørensen, Søren Johannes, Larkum, A. W. D., Winther, Jakob R. & Kühl, Michael, 2014, In: Applied and Environmental Microbiology. 80, 10, p. 3244-3249 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Sequence and comparative analysis of Leuconostoc dairy bacteriophages

    Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Hammer, K., Jacobsen, S., Pedersen, P. D., Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2014, In: International Journal of Food Microbiology. 176, p. 29-37 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Sequentially aerated membrane biofilm reactors for autotrophic nitrogen removal: microbial community composition and dynamics

    Pellicer i Nàcher, C., Franck, S., Gülay, A., Ruscalleda, M., Terada, A., Abu Al-Soud, W., Hansen, M. A., Sørensen, Søren Johannes & Smets, B. F., 2014, In: Microbial Biotechnology. 7, 1, p. 32-43 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Shifts in abundance and diversity of mobile genetic elements after the introduction of diverse pesticides into an on-farm biopurification system over the course of a year

    Dealtry, S., Holmsgaard, P. N., Dunon, V., Jechalke, S., Ding, G., Kroegerrecklenfort, E., Heuer, H., Hansen, Lars Hestbjerg, Springael, D., Zuehlke, S., Sørensen, Søren Johannes & Smalla, K., 2014, In: Applied and Environmental Microbiology. 80, 13, p. 4012-4020 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Synbiotic Lactobacillus acidophilus NCFM and cellobiose does not affect human gut bacterial diversity but increases abundance of lactobacilli, bifidobacteria and branched-chain fatty acids: a randomized, double-blinded cross-over trial

    van Zanten, G. C., Krych, Lukasz, Röytiö, H., Forssten, S., Lahtinen, S. J., Abu Al-Soud, W., Sørensen, Søren Johannes, Svensson, B., Jespersen, Lene & Jakobsen, M., 2014, In: F E M S Microbiology Ecology. 90, 1, p. 225-236 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    The giraffe (Giraffa camelopardalis) rumen microbiome

    Roggenbuck, M., Sauer, C., Poulsen, M., Bertelsen, M. F. & Sørensen, Søren Johannes, 2014, In: F E M S Microbiology Ecology. 90, 1, p. 237-246 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    The microbiome of New World vultures

    Roggenbuck, M., Schnell, I. B., Blom, N., Bælum, J., Bertelsen, M. F., Sicheritz-Pontén, T., Sørensen, Søren Johannes, Gilbert, M Thomas P, Graves, G. R. & Hansen, L. H., 2014, In: Nature Communications. 5, 7 p., 5498.

    Research output: Contribution to journal › Journal article › Research › peer-review

ID: 4269