Chromatin accessibility and transcriptome landscapes of Monomorium pharaonis brain

Research output: Contribution to journal › Journal article › Research › peer-review

Standard

Chromatin accessibility and transcriptome landscapes of Monomorium pharaonis brain. / Wang, Mingyue; Liu, Yang; Wen, Tinggang; Liu, Weiwei; Gao, Qionghua; Zhao, Jie; Xiong, Zijun; Wang, Zhifeng; Jiang, Wei; Yu, Yeya; Wu, Liang; Yuan, Yue; Wei, Xiaoyu; Xu, Jiangshan; Cheng, Mengnan; Zhang, Pei; Li, Panyi; Hou, Yong; Yang, Huanming; Zhang, Guojie; Li, Qiye; Liu, Chuanyu; Liu, Longqi.

In: Scientific Data, Vol. 7, 217, 2020.

Research output: Contribution to journal › Journal article › Research › peer-review

Harvard

Wang, M, Liu, Y, Wen, T, Liu, W, Gao, Q, Zhao, J, Xiong, Z, Wang, Z, Jiang, W, Yu, Y, Wu, L, Yuan, Y, Wei, X, Xu, J, Cheng, M, Zhang, P, Li, P, Hou, Y, Yang, H, Zhang, G, Li, Q, Liu, C & Liu, L 2020, 'Chromatin accessibility and transcriptome landscapes of Monomorium pharaonis brain', Scientific Data, vol. 7, 217. https://doi.org/10.1038/s41597-020-0556-x

APA

Wang, M., Liu, Y., Wen, T., Liu, W., Gao, Q., Zhao, J., Xiong, Z., Wang, Z., Jiang, W., Yu, Y., Wu, L., Yuan, Y., Wei, X., Xu, J., Cheng, M., Zhang, P., Li, P., Hou, Y., Yang, H., ... Liu, L. (2020). Chromatin accessibility and transcriptome landscapes of Monomorium pharaonis brain. Scientific Data, 7, [217]. https://doi.org/10.1038/s41597-020-0556-x

Vancouver

Wang M, Liu Y, Wen T, Liu W, Gao Q, Zhao J et al. Chromatin accessibility and transcriptome landscapes of Monomorium pharaonis brain. Scientific Data. 2020;7. 217. https://doi.org/10.1038/s41597-020-0556-x

Author

Wang, Mingyue ; Liu, Yang ; Wen, Tinggang ; Liu, Weiwei ; Gao, Qionghua ; Zhao, Jie ; Xiong, Zijun ; Wang, Zhifeng ; Jiang, Wei ; Yu, Yeya ; Wu, Liang ; Yuan, Yue ; Wei, Xiaoyu ; Xu, Jiangshan ; Cheng, Mengnan ; Zhang, Pei ; Li, Panyi ; Hou, Yong ; Yang, Huanming ; Zhang, Guojie ; Li, Qiye ; Liu, Chuanyu ; Liu, Longqi. / Chromatin accessibility and transcriptome landscapes of Monomorium pharaonis brain. In: Scientific Data. 2020 ; Vol. 7.

Bibtex

@article{29e560908f544e68b7096126213a274d,
title = "Chromatin accessibility and transcriptome landscapes of Monomorium pharaonis brain",
abstract = "The emergence of social organization (eusociality) is a major event in insect evolution. Although previous studies have investigated the mechanisms underlying caste differentiation and social behavior of eusocial insects including ants and honeybees, the molecular circuits governing sociality in these insects remain obscure. In this study, we profiled the transcriptome and chromatin accessibility of brain tissues in threeMonomorium pharaonisant castes: queens (including mature and un-mated queens), males and workers. We provide a comprehensive dataset including 16 RNA-sequencing and 16 assay for transposase accessible chromatin (ATAC)-sequencing profiles. We also demonstrate strong reproducibility of the datasets and have identified specific genes and open chromatin regions in the genome that may be associated with the social function of these castes. Our data will be a valuable resource for further studies of insect behaviour, particularly the role of brain in the control of eusociality.",
keywords = "CONVERGENT EVOLUTION, CASTE IDENTITY, GENES, DIVERSIFICATION, NEUROPEPTIDE, HYMENOPTERA, EUSOCIALITY, PHENOTYPES, PEPTIDES, PATTERNS",
author = "Mingyue Wang and Yang Liu and Tinggang Wen and Weiwei Liu and Qionghua Gao and Jie Zhao and Zijun Xiong and Zhifeng Wang and Wei Jiang and Yeya Yu and Liang Wu and Yue Yuan and Xiaoyu Wei and Jiangshan Xu and Mengnan Cheng and Pei Zhang and Panyi Li and Yong Hou and Huanming Yang and Guojie Zhang and Qiye Li and Chuanyu Liu and Longqi Liu",
year = "2020",
doi = "10.1038/s41597-020-0556-x",
language = "English",
volume = "7",
journal = "Scientific data",
issn = "2052-4463",
publisher = "nature publishing group",

}

RIS

TY - JOUR

T1 - Chromatin accessibility and transcriptome landscapes of Monomorium pharaonis brain

AU - Wang, Mingyue

AU - Liu, Yang

AU - Wen, Tinggang

AU - Liu, Weiwei

AU - Gao, Qionghua

AU - Zhao, Jie

AU - Xiong, Zijun

AU - Wang, Zhifeng

AU - Jiang, Wei

AU - Yu, Yeya

AU - Wu, Liang

AU - Yuan, Yue

AU - Wei, Xiaoyu

AU - Xu, Jiangshan

AU - Cheng, Mengnan

AU - Zhang, Pei

AU - Li, Panyi

AU - Hou, Yong

AU - Yang, Huanming

AU - Zhang, Guojie

AU - Li, Qiye

AU - Liu, Chuanyu

AU - Liu, Longqi

PY - 2020

Y1 - 2020

N2 - The emergence of social organization (eusociality) is a major event in insect evolution. Although previous studies have investigated the mechanisms underlying caste differentiation and social behavior of eusocial insects including ants and honeybees, the molecular circuits governing sociality in these insects remain obscure. In this study, we profiled the transcriptome and chromatin accessibility of brain tissues in threeMonomorium pharaonisant castes: queens (including mature and un-mated queens), males and workers. We provide a comprehensive dataset including 16 RNA-sequencing and 16 assay for transposase accessible chromatin (ATAC)-sequencing profiles. We also demonstrate strong reproducibility of the datasets and have identified specific genes and open chromatin regions in the genome that may be associated with the social function of these castes. Our data will be a valuable resource for further studies of insect behaviour, particularly the role of brain in the control of eusociality.

AB - The emergence of social organization (eusociality) is a major event in insect evolution. Although previous studies have investigated the mechanisms underlying caste differentiation and social behavior of eusocial insects including ants and honeybees, the molecular circuits governing sociality in these insects remain obscure. In this study, we profiled the transcriptome and chromatin accessibility of brain tissues in threeMonomorium pharaonisant castes: queens (including mature and un-mated queens), males and workers. We provide a comprehensive dataset including 16 RNA-sequencing and 16 assay for transposase accessible chromatin (ATAC)-sequencing profiles. We also demonstrate strong reproducibility of the datasets and have identified specific genes and open chromatin regions in the genome that may be associated with the social function of these castes. Our data will be a valuable resource for further studies of insect behaviour, particularly the role of brain in the control of eusociality.

KW - CONVERGENT EVOLUTION

KW - CASTE IDENTITY

KW - GENES

KW - DIVERSIFICATION

KW - NEUROPEPTIDE

KW - HYMENOPTERA

KW - EUSOCIALITY

KW - PHENOTYPES

KW - PEPTIDES

KW - PATTERNS

U2 - 10.1038/s41597-020-0556-x

DO - 10.1038/s41597-020-0556-x

M3 - Journal article

C2 - 32641764

VL - 7

JO - Scientific data

JF - Scientific data

SN - 2052-4463

M1 - 217

ER -

ID: 246822872