PigGIS: Pig Genomic Informatics System

Research output: Contribution to journal › Journal article › Research › peer-review

Standard

PigGIS: Pig Genomic Informatics System. / Ruan, Jue; Guo, Yiran; Li, Heng; Hu, Yafeng; Song, Fei; Huang, Xin; Kristiansen, Karsten; Bolund, Lars; Wang, Jun.

In: Nucleic Acids Symposium Series, Vol. 35, No. Database issue, 2007, p. D654-657.

Research output: Contribution to journal › Journal article › Research › peer-review

Harvard

Ruan, J, Guo, Y, Li, H, Hu, Y, Song, F, Huang, X, Kristiansen, K, Bolund, L & Wang, J 2007, 'PigGIS: Pig Genomic Informatics System', Nucleic Acids Symposium Series, vol. 35, no. Database issue, pp. D654-657. https://doi.org/10.1093/nar/gkl808

APA

Ruan, J., Guo, Y., Li, H., Hu, Y., Song, F., Huang, X., Kristiansen, K., Bolund, L., & Wang, J. (2007). PigGIS: Pig Genomic Informatics System. Nucleic Acids Symposium Series, 35(Database issue), D654-657. https://doi.org/10.1093/nar/gkl808

Vancouver

Ruan J, Guo Y, Li H, Hu Y, Song F, Huang X et al. PigGIS: Pig Genomic Informatics System. Nucleic Acids Symposium Series. 2007;35(Database issue):D654-657. https://doi.org/10.1093/nar/gkl808

Author

Ruan, Jue ; Guo, Yiran ; Li, Heng ; Hu, Yafeng ; Song, Fei ; Huang, Xin ; Kristiansen, Karsten ; Bolund, Lars ; Wang, Jun. / PigGIS: Pig Genomic Informatics System. In: Nucleic Acids Symposium Series. 2007 ; Vol. 35, No. Database issue. pp. D654-657.

Bibtex

@article{0eae7250f75411ddbf70000ea68e967b,
title = "PigGIS: Pig Genomic Informatics System",
abstract = "Pig Genomic Information System (PigGIS) is a web-based depository of pig (Sus scrofa) genomic learning mainly engineered for biomedical research to locate pig genes from their human homologs and position single nucleotide polymorphisms (SNPs) in different pig populations. It utilizes a variety of sequence data, including whole genome shotgun (WGS) reads and expressed sequence tags (ESTs), and achieves a successful mapping solution to the low-coverage genome problem. With the data presently available, we have identified a total of 15 700 pig consensus sequences covering 18.5 Mb of the homologous human exons. We have also recovered 18 700 SNPs and 20 800 unique 60mer oligonucleotide probes for future pig genome analyses. PigGIS can be freely accessed via the web at http://www.piggis.org/ and http://pig.genomics.org.cn/.",
author = "Jue Ruan and Yiran Guo and Heng Li and Yafeng Hu and Fei Song and Xin Huang and Karsten Kristiansen and Lars Bolund and Jun Wang",
year = "2007",
doi = "10.1093/nar/gkl808",
language = "English",
volume = "35",
pages = "D654--657",
journal = "Nucleic acids symposium series",
issn = "0261-3166",
publisher = "Oxford University Press",
number = "Database issue",

}

RIS

TY - JOUR

T1 - PigGIS: Pig Genomic Informatics System

AU - Ruan, Jue

AU - Guo, Yiran

AU - Li, Heng

AU - Hu, Yafeng

AU - Song, Fei

AU - Huang, Xin

AU - Kristiansen, Karsten

AU - Bolund, Lars

AU - Wang, Jun

PY - 2007

Y1 - 2007

N2 - Pig Genomic Information System (PigGIS) is a web-based depository of pig (Sus scrofa) genomic learning mainly engineered for biomedical research to locate pig genes from their human homologs and position single nucleotide polymorphisms (SNPs) in different pig populations. It utilizes a variety of sequence data, including whole genome shotgun (WGS) reads and expressed sequence tags (ESTs), and achieves a successful mapping solution to the low-coverage genome problem. With the data presently available, we have identified a total of 15 700 pig consensus sequences covering 18.5 Mb of the homologous human exons. We have also recovered 18 700 SNPs and 20 800 unique 60mer oligonucleotide probes for future pig genome analyses. PigGIS can be freely accessed via the web at http://www.piggis.org/ and http://pig.genomics.org.cn/.

AB - Pig Genomic Information System (PigGIS) is a web-based depository of pig (Sus scrofa) genomic learning mainly engineered for biomedical research to locate pig genes from their human homologs and position single nucleotide polymorphisms (SNPs) in different pig populations. It utilizes a variety of sequence data, including whole genome shotgun (WGS) reads and expressed sequence tags (ESTs), and achieves a successful mapping solution to the low-coverage genome problem. With the data presently available, we have identified a total of 15 700 pig consensus sequences covering 18.5 Mb of the homologous human exons. We have also recovered 18 700 SNPs and 20 800 unique 60mer oligonucleotide probes for future pig genome analyses. PigGIS can be freely accessed via the web at http://www.piggis.org/ and http://pig.genomics.org.cn/.

U2 - 10.1093/nar/gkl808

DO - 10.1093/nar/gkl808

M3 - Journal article

C2 - 17090590

VL - 35

SP - D654-657

JO - Nucleic acids symposium series

JF - Nucleic acids symposium series

SN - 0261-3166

IS - Database issue

ER -

ID: 10243154