SICTIN: Rapid footprinting of massively parallel sequencing data
Research output: Contribution to journal › Journal article › Research › peer-review
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SICTIN : Rapid footprinting of massively parallel sequencing data. / Enroth, Stefan; Andersson, Robin; Wadelius, Claes; Komorowski, Jan.
In: BioData Mining, Vol. 3, No. 1, 2010, p. 4.Research output: Contribution to journal › Journal article › Research › peer-review
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TY - JOUR
T1 - SICTIN
T2 - Rapid footprinting of massively parallel sequencing data
AU - Enroth, Stefan
AU - Andersson, Robin
AU - Wadelius, Claes
AU - Komorowski, Jan
PY - 2010
Y1 - 2010
N2 - Massively parallel sequencing allows for genome-wide hypothesis-free investigation of for instance transcription factor binding sites or histone modifications. Although nucleotide resolution detailed information can easily be generated, biological insight often requires a more general view of patterns (footprints) over distinct genomic features such as transcription start sites, exons or repetitive regions. The construction of these footprints is however a time consuming task.
AB - Massively parallel sequencing allows for genome-wide hypothesis-free investigation of for instance transcription factor binding sites or histone modifications. Although nucleotide resolution detailed information can easily be generated, biological insight often requires a more general view of patterns (footprints) over distinct genomic features such as transcription start sites, exons or repetitive regions. The construction of these footprints is however a time consuming task.
U2 - 10.1186/1756-0381-3-4
DO - 10.1186/1756-0381-3-4
M3 - Journal article
C2 - 20707885
VL - 3
SP - 4
JO - BioData Mining
JF - BioData Mining
SN - 1756-0381
IS - 1
ER -
ID: 106775434