Using multi-data hidden Markov models trained on local neighborhoods of protein structure to predict residue-residue contacts

Research output: Contribution to journalJournal articleResearchpeer-review

  • Patrik Björkholm
  • Pawel Daniluk
  • Andriy Kryshtafovych
  • Krzysztof Fidelis
  • Andersson, Robin
  • Torgeir R Hvidsten
Correct prediction of residue-residue contacts in proteins that lack good templates with known structure would take ab initio protein structure prediction a large step forward. The lack of correct contacts, and in particular long-range contacts, is considered the main reason why these methods often fail.
Original languageEnglish
JournalBioinformatics (Online)
Volume25
Issue number10
Pages (from-to)1264-70
Number of pages7
ISSN1367-4811
DOIs
Publication statusPublished - 15 May 2009
Externally publishedYes

    Research areas

  • Computational Biology, Databases, Protein, Markov Chains, Models, Molecular, Protein Folding, Protein Structure, Secondary, Proteins

ID: 106775862