Robin Andersson

Robin Andersson

Associate Professor

ORCID: 0000-0003-1516-879X

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  1. Published

    hyperTRIBER: a flexible R package for the analysis of differential RNA editing

    Rennie, Sarah, Magnusson, D. H. & Andersson, Robin, 2021, 12 p.

    Research output: Working paper › Preprint › Research

  2. Using multi-data hidden Markov models trained on local neighborhoods of protein structure to predict residue-residue contacts

    Björkholm, P., Daniluk, P., Kryshtafovych, A., Fidelis, K., Andersson, Robin & Hvidsten, T. R., 15 May 2009, In: Bioinformatics (Online). 25, 10, p. 1264-70 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Update of the FANTOM web resource: high resolution transcriptome of diverse cell types in mammals

    Lizio, M., Harshbarger, J., Abugessaisa, I., Noguchi, S., Kondo, A., Severin, J., Mungall, C., Arenillas, D., Mathelier, A., Medvedeva, Y. A., Lennartsson, A., Drabløs, F., Ramilowski, J. A., Rackham, O., Gough, J., Andersson, R., Sandelin, A. G., Ienasescu, H-I., Ono, H., Bono, H. & 5 others, Hayashizaki, Y., Carninci, P., Forrest, A. R. R., Kasukawa, T. & Kawaji, H., 2017, In: Nucleic Acids Research. 45, D1, p. D737-D743 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Transfer learning reveals sequence determinants of regulatory element accessibility

    Salvatore, Marco, Horlacher, M., Winther, Ole & Andersson, Robin, 2022, bioRxiv, 24 p.

    Research output: Working paper › Preprint › Research

  5. Published

    Transfer learning identifies sequence determinants of cell-type specific regulatory element accessibility

    Salvatore, Marco, Horlacher, M., Marsico, A., Winther, Ole & Andersson, Robin, 2023, In: NAR Genomics and Bioinformatics. 5, 2, 10 p., 026.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Transcriptome analysis of recurrently deregulated genes across multiple cancers identifies new pan-cancer biomarkers

    Kaczkowski, B., Tanaka, Y., Kawaji, H., Sandelin, Albin Gustav, Andersson, Robin, Itoh, M., Lassmann, T., the FANTOM5 consortium, Hayashizaki, Y., Carninci, P. & Forrest, A. R. R., 2016, In: Cancer Research. 76, 2, p. 216-226

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Transcriptional profiling of the human fibrillin/LTBP gene family, key regulators of mesenchymal cell functions

    Davis, M. R., Andersson, Robin, Severin, J., de Hoon, M., Bertin, N., Baillie, J. K., Kawaji, H., Sandelin, Albin Gustav, Forrest, A. R. R. & Summers, K. M., 2014, In: Molecular Genetics and Metabolism. 112, 3, p. 73-83 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Transcriptional dynamics during human adipogenesis and its link to adipose morphology and distribution

    Ehrlund, A., Mejhert, N., Björk, C., Andersson, Robin, Kulyté, A., Åström, G., Itoh, M., Kawaji, H., Lassmann, T., Daub, C. O., Carninci, P., Forrest, A. R. R., Hayashizaki, Y., Sandelin, Albin Gustav, Ingelsson, E., FANTOM Consortium, Rydén, M., Laurencikiene, J., Arner, P. & Arner, E., 2017, In: Diabetes. 66, 1, p. 218-230 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Transcriptional decomposition reveals active chromatin architectures and cell specific regulatory interactions

    Rennie, Sarah, Dalby, M., van Duin, Lucas & Andersson, Robin, 2018, In: Nature Communications. 9, 16 p., 487.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Transcription start site analysis reveals widespread divergent transcription in D. melanogaster and core promoter-encoded enhancer activities

    Rennie, Sarah, Dalby, M., Lloret-Llinares, M., Bakoulis, Stylianos, Dalager Vaagensø, C., Jensen, T. H. & Andersson, Robin, 2018, In: Nucleic Acids Research. 46, 11, p. 5455-5469 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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