Karsten Kristiansen
Professor
- 2023
- Published
Genome sequence and genomic analysis of liver abscess caused by hypervirulent Klebsiella pneumoniae
Pei, N., Liu, X., Jian, Z., Yan, Q., Liu, Q., Kristiansen, Karsten, Li, J. & Liu, W., 2023, In: 3 Biotech. 13, 3, 7 p., 76.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Co-diversification of an intestinal Mycoplasma and its salmonid host
Rasmussen, Jacob Agerbo, Kiilerich, P., Madhun, A. S., Waagbø, R., Lock, E. J. R., Madsen, L., Gilbert, M Thomas P, Kristiansen, Karsten & Limborg, Morten Tønsberg, 2023, In: ISME Journal. 17, 5, p. 682-692 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Age-dependent changes in the gut microbiota and serum metabolome correlate with renal function and human aging
Sun, L., Li, Z., Hu, C., Ding, J., Zhou, Q., Pang, G., Wu, Z., Yang, R., Li, S., Li, J., Cai, J., Sun, Y., Li, R., Zhen, H., Sun, S., Zhang, J., Fang, M., Chen, Z., Lv, Y., Cao, Q. & 36 others, , 2023, In: Aging Cell. 22, 12, 20 p., e14028.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cold-stimulated brown adipose tissue activation is related to changes in serum metabolites relevant to NAD+ metabolism in humans
U-Din, M., de Mello, V. D., Tuomainen, M., Raiko, J., Niemi, T., Fromme, T., Klåvus, A., Gautier, N., Haimilahti, K., Lehtonen, M., Kristiansen, Karsten, Newman, J. W., Pietiläinen, K. H., Pihlajamäki, J., Amri, E. Z., Klingenspor, M., Nuutila, P., Pirinen, E., Hanhineva, K. & Virtanen, K. A., 26 Sep 2023, In: Cell Reports. 42, 9, 23 p., 113131.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Epigenetic Regulation of Driver Genes in Testicular Tumorigenesis
von Eyben, F. E., Kristiansen, Karsten, Kapp, D. S., Hu, R., Preda, O. & Nogales, F. F., 2023, In: International Journal of Molecular Sciences. 24, 4, 28 p., 4148.Research output: Contribution to journal › Review › Research › peer-review
- 2022
- Published
Distinct Functional Metagenomic Markers Predict the Responsiveness to Anti-PD-1 Therapy in Chinese Non-Small Cell Lung Cancer Patients
Fang, C., Fang, W., Xu, L., Gao, F., Hou, Y., Zou, H., Ma, Y., Moll, J. M., Yang, Y., Wang, D., Huang, Y., Ren, H., Zhao, H., Qin, S., Zhong, H., Li, J., Liu, S., Yang, H., Wang, J., Brix, S. & 2 others, , 2022, In: Frontiers in Oncology. 12, 13 p., 837525.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Maternal gut microbiota during pregnancy and the composition of immune cells in infancy
Gao, Y., O'Hely, M., Quinn, T. P., Ponsonby, A., Harrison, L. C., Frøkiær, Hanne, Tang, M. L. K., Brix, S., Kristiansen, Karsten, Burgner, D., Saffery, R., Ranganathan, S., Collier, F., Vuillermin, P. & BIS Investigator Grp, B. I. G., 2022, In: Frontiers in Immunology. 13, 11 p., 986340.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chromosome-scale assembly and whole-genome sequencing of 266 giant panda roundworms provide insights into their evolution, adaptation and potential drug targets
Han, L., Lan, T., Li, D., Li, H., Deng, L., Peng, Z., He, S., Zhou, Y., Han, R., Li, L., Lu, Y., Lu, H., Wang, Q., Yang, S., Zhu, Y., Huang, Y., Cheng, X., Yu, J., Wang, Y., Sun, H. & 8 others, , 2022, In: Molecular Ecology Resources. 22, 2, p. 768-785 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Profiling the Atopic Dermatitis Epidermal Transcriptome by Tape Stripping and BRB-seq
Hu, T., Todberg, T., Andersen, D., Danneskiold-Samsøe, Niels Banhos, Hansen, Sofie Boesgaard Neestrup, Kristiansen, Karsten, Ewald, D. A., Brix, S., da Rosa, J. C., Hoof, I., Skov, Lone & Litman, Thomas, 2022, In: International Journal of Molecular Sciences. 23, 11, 12 p., 6140.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sequencing introduced false positive rare taxa lead to biased microbial community diversity, assembly, and interaction interpretation in amplicon studies
Jia, Y., Zhao, S., Guo, W., Peng, L., Zhao, F., Wang, L., Fan, G., Zhu, Y., Xu, D., Liu, G., Wang, R., Fang, X., Zhang, H., Kristiansen, Karsten, Zhang, W. & Chen, J., 2022, In: Environmental Microbiomes. 17, 18 p., 43.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A pilot study of assessing whole genome sequencing in newborn screening in unselected children in China
Jian, M., Wang, X., Sui, Y., Fang, M., Feng, C., Huang, Y., Liu, C., Guo, R., Guan, Y., Gao, Y., Wang, Z., Li, S., Cheng, B., Sun, L., Cui, F., Guo, J., Zhan, Y., Zhang, G., Zheng, L., Su, F. & 14 others, , 2022, In: Clinical and Translational Medicine. 12, 6, 12 p., e843.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Life History Recorded in the Vagino-cervical Microbiome Along with Multi-omes
Jie, Z., Chen, C., Hao, L., Li, F., Song, L., Zhang, X., Zhu, J., Tian, L., Tong, X., Cai, K., Zhang, Z., Ju, Y., Yu, X., Li, Y., Zhou, H., Lu, H., Qiu, X., Li, Q., Liao, Y., Zhou, D. & 21 others, , 2022, In: Genomics, Proteomics and Bioinformatics. 20, 2, p. 304-321 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multi-omics analyses of serum metabolome, gut microbiome and brain function reveal dysregulated microbiota-gut-brain axis in bipolar depression
Li, Z., Lai, J., Zhang, P., Ding, J., Jiang, J., Liu, C., Huang, H., Zhen, H., Xi, C., Sun, Y., Wu, L., Wang, L., Gao, X., Li, Y., Fu, Y., Jie, Z., Li, S., Zhang, D., Chen, Y., Zhu, Y. & 15 others, , 2022, In: Molecular Psychiatry. 27, 1, 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genome-wide association study of Klebsiella pneumoniae identifies variations linked to carbapenems resistance
Pei, N., Sun, W., He, J., Li, Y., Chen, X., Liang, T., Kristiansen, Karsten, Liu, W. & Li, J., 2022, In: Frontiers in Microbiology. 13, 11 p., 997769.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Large-Scale Genomic Epidemiology of Klebsiella pneumoniae Identified Clone Divergence with Hypervirulent Plus Antimicrobial-Resistant Characteristics Causing Within-Ward Strain Transmissions
Pei, N., Li, Y., Liu, C., Jian, Z., Liang, T., Zhong, Y., Sun, W., He, J., Cheng, X., Li, H., Lei, X., Liu, X., Deng, Z., Liu, Q., Chen, X., Yan, Q., Kristiansen, Karsten, Li, J. & Liu, W., 2022, In: Microbiology Spectrum. 10, 2, 14 p., e02698-21.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A multi-omics approach unravels metagenomic and metabolic alterations of a probiotic and synbiotic additive in rainbow trout (Oncorhynchus mykiss)
Rasmussen, Jacob Agerbo, Villumsen, Kasper Rømer, Ernst, M., Hansen, M., Forberg, T., Gopalakrishnan, Shyam, Gilbert, M Thomas P, Bojesen, Anders Miki, Kristiansen, Karsten & Limborg, Morten Tønsberg, 2022, In: Microbiome. 10, 19 p., 21.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Integrative analyses of probiotics, pathogenic infections and host immune response highlight the importance of gut microbiota in understanding disease recovery in rainbow trout (Oncorhynchus mykiss)
Rasmussen, Jacob Agerbo, Villumsen, Kasper Rømer, Jørgensen, Louise von Gersdorff, Forberg, T., Zuo, S., Kania, Per, Buchmann, Kurt, Kristiansen, Karsten, Bojesen, Anders Miki & Limborg, Morten Tønsberg, 2022, In: Journal of Applied Microbiology. 132, 4, p. 3201-3216 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Pot-pollen supplementation reduces fasting glucose and modulates the gut microbiota in high-fat/high-sucrose fed C57BL/6 mice
Rebelo, K. S., Nunez, C. E. C., Cazarin, C. B. B., Maróstica Júnior, M. R., Kristiansen, Karsten & Danneskiold-Samsøe, Niels Banhos, 2022, In: Food & Function. 13, 7, p. 3982-3992 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The FASTQ+ format and PISA
Shi, Quan, Liu, S., Kristiansen, Karsten & Liu, L., 2022, In: Bioinformatics. 38, 19, p. 4639-4642 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effects of Lifetime Exposures to Environmental Contaminants on the Adult Gut Microbiome
Thompson, K. N., Oulhote, Y., Weihe, P., Wilkinson, J. E., Ma, S., Zhong, H., Li, J., Kristiansen, Karsten, Huttenhower, C. & Grandjean, P., 2022, In: Environmental Science & Technology. 56, 23, p. 16985-16995 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Whole-genome sequence of the planarian Dugesia japonica combining Illumina and PacBio data
Tian, Q., Guo, Q., Guo, Y., Luo, L., Kristiansen, Karsten, Han, Z., Fang, H. & Zhang, S., 2022, In: Genomics. 114, 2, 10 p., 110293.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
In vitro digestion mimicking conditions in young and elderly reveals marked differences between profiles and potential bioactivity of peptides from meat and soy proteins
Wang, Chong, Zhao, Fan, Bai, Y., Li, C., Xu, X., Kristiansen, Karsten & Zhou, G., 2022, In: Food Research International. 157, 11 p., 111215.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effect of gastrointestinal alterations mimicking elderly conditions on in vitro digestion of meat and soy proteins
Wang, Chong, Zhao, Fan, Bai, Y., Li, C., Xu, X., Kristiansen, Karsten & Zhou, G., 2022, In: Food Chemistry. 383, 9 p., 132465.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Proteomic Analysis of the Protective Effect of Eriodictyol on Benzo(a)pyrene-Induced Caco-2 Cytotoxicity
Wang, Chong, Zhao, Fan, Bai, Y., Li, C., Xu, X., Kristiansen, Karsten & Zhou, G., 2022, In: Frontiers in Nutrition. 9, 14 p., 839364.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chord: an ensemble machine learning algorithm to identify doublets in single-cell RNA sequencing data
Xiong, K., Zhou, H., Lin, C., Yin, J., Kristiansen, Karsten, Yang, H. & Li, G., 2022, In: Communications Biology . 5, 11 p., 510.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 6489714
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Genetic architecture of vitamin B12 and folate levels uncovered applying deeply sequenced large datasets
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2-heptyl-formononetin increases cholesterol and induces hepatic steatosis in mice
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Identification of odorant-receptor interactions by global mapping of the human odorome
Research output: Contribution to journal › Journal article › Research › peer-review
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