Ecology and Evolution

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  1. Published

    The introduction history of invasive garden ants in Europe: integrating genetic, chemical and behavioural approaches

    Ugelvig, Line Vej, Drijfhout, F., Kronauer, D., Boomsma, Jacobus J., Pedersen, Jes Søe & Cremer, S., 2008, In: BMC Biology. 6, p. 1-14 11.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    The importance of local forest benefits: economic valuation of non-timber forest products in the eastern arc mountains in Tanzania

    Schaafsma, M., Morse-Jones, S., Posen, P., Sweetnam, R. D., Balmford, A., Bateman, I. J., Burgess, N. D., Chamshama, S. A. O., Fisher, B., Freeman, T., Geofrey, V., Green, R. E., Hepelwa, A. S., Hernández-Sirvent, A., Hess, S., Kajembe, G. C., Kayhara, G., Kilonzo, M., Kulindwa, K., Lund, J. F. & 9 others, Madoffe, S. S., Mwambo, L., Meilby, Henrik, Ngaga, Y. M., Theilade, Ida, Treue, Thorsten, van Beukering, P., Vyamana, V. G. & Turner, R. K., 2014, In: Global Environmental Change. 24, p. 295-305 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    The imperial blue, Jalmenus evagoras (Lycaenidae)

    Pierce, N. E. & Nash, David Richard, 1999, Biology of Australian Butterflies. Vol. 6. p. 279-317 39 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  4. Published

    The impact of early life antibiotic use on atopic and metabolic disorders: Meta-analyses of recent insights

    Bejaoui, S. & Poulsen, Michael, 2020, In: Evolution, Medicine, and Public Health. 2020, 1, p. 279-289 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    The imitation dilemma: can parrots maintain their vocal individuality when imitating conspecifics?

    Thomsen, Heidi Maria, Balsby, T. J. S. & Dabelsteen, Torben, 2019, In: Behaviour. 156, 5-8, p. 787-814 28 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    The ghosts of mammals past: biological and geographical patterns of global mammalian extinction across the Holocene

    Turvey, S. T. & Fritz, S. A., 2011, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 366, 1577, p. 2564-2576 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    The germline mutational process in rhesus macaque and its implications for phylogenetic dating

    Bergeron, Lucie Adrienne, Besenbacher, S., Bakker, J., Zheng, J., Li, P., Antunes Pacheco, George, Sinding, Mikkel Holger Strander, Kamilari, M., Gilbert, M Thomas P, Schierup, M. H. & KU, thw266, 2021, In: GigaScience. 10, 5, 14 p., giab029.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    The geographic scaling of biotic interactions

    Bastos, M. & Rozenfeld, A., 2014, In: Ecography. 37, 5, p. 406-415 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    The genus Elaphomyces (Ascomycota, Eurotiales): a ribosomal DNA-based phylogeny and revised systematics of European 'deer truffles'

    Paz, A., Bellanger, J. -., Lavoise, C., Molia, A., Ławrynowicz, M., Larsson, E., Ibarguren, I. O., Jeppson, M., Læssøe, Thomas, Sauve, M., Richard, F. & Moreau, P. -., Jun 2017, In: Persoonia. 38, p. 197-239 43 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    The genomic impact of 100 million years of social evolution in seven ant species

    Gadau, J., Helmkampf, M., Nygaard, S., Roux, J., Simola, D. F., Smith, C. R., Suen, G., Wurm, Y. & Smith, C. D., 2012, In: Trends in Genetics. 28, 1, p. 14-21 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    The genomic basis of the plant island syndrome in Darwin’s giant daisies

    Cerca, J., Petersen, B., Lazaro-Guevara, J. M., Rivera-Colón, A., Birkeland, S., Vizueta, J., Li, S., Li, Q., Loureiro, J., Kosawang, C., Díaz, P. J., Rivas-Torres, G., Fernández-Mazuecos, M., Vargas, P., McCauley, R. A., Petersen, G., Santos-Bay, L., Wales, N., Catchen, J. M., Machado, D. & 9 others, Nowak, M. D., Suh, A., Sinha, N. R., Nielsen, Lene Rostgaard, Seberg, Ole, Gilbert, M Thomas P, Leebens-Mack, J. H., Rieseberg, L. H. & Martin, M. D., 2022, In: Nature Communications. 13, 13 p., 3729.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    The genome of the leaf-cutting ant Acromyrmex echinatior suggests key adaptations to advanced social life and fungus farming

    Nygaard, S., Zhang, G., Schiøtt, M., Li, C., Wurm, Y., Hu, H., Zhou, J., Ji, L., Qiu, F., Rasmussen, M., Pan, H., Hauser, Frank, Krogh, Anders, Grimmelikhuijzen, Cornelis (Cok), Wang, J. & Boomsma, Jacobus J., 2011, In: Genome Research. 21, 8, p. 1339-1348 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    The genome of the largest bony fish, ocean sunfish (Mola mola), provides insights into its fast growth rate

    Pan, H., Yu, H., Ravi, V., Li, C., Lee, A. P., Lian, M. M., Tay, B., Brenner, S., Wang, J., Yang, H., KU, thw266 & Venkatesh, B., 2016, In: GigaScience. 5, 12 p., 36.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    The genome of the fire ant Solenopsis invicta

    Wurm, Y., Wang, J., Riba-Grognuz, O., Corona, M., Nygaard, S., Hunt, B. G., Ingram, K. K., Falquet, L., Nipitwattanaphon, M., Gotzek, D., Dijkstra, M. B., Oettler, J., Comtesse, F., Shih, C-J., Wu, W-J., Yang, C-C., Thomas, J., Beaudoing, E., Pradervand, S., Flegel, V. & 18 others, Cook, E. D., Fabbretti, R., Stockinger, H., Long, L., Farmerie, W. G., Oakey, J., Boomsma, Jacobus J., Pamilo, P., Yi, S. V., Heinze, J., Goodisman, M. A. D., Farinelli, L., Harshman, K., Hulo, N., Cerutti, L., Xenarios, I., Shoemaker, D. & Keller, L., 2011, In: Proceedings of the National Academy of Sciences of the United States of America. 108, 14, p. 5679-84 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    The genome of the clonal raider ant Cerapachys biroi

    Oxley, P. R., Ji, L., Fetter-Pruneda, I., McKenzie, S. K., Li, C., Hu, H., KU, thw266 & Kronauer, D. J. C., 2014, In: Current Biology. 24, 4, p. 451-458 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    The genetic regulatory network mediating caste differentiation in ants: a transcriptomic view

    Qiu, Bitao, 2019, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  17. Published

    The gene expression network regulating queen brain remodeling after insemination and its parallel use in ants with reproductive workers

    Nagel, M., Qiu, Bitao, Brandenborg, L. E., Larsen, Rasmus Stenbak, Ning, D., Boomsma, Jacobus J. & KU, thw266, 2020, In: Science Advances. 6, 38, 17 p., eaaz5772.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    The gambin model provides a superior fit to species abundance distributions with a single free parameter: evidence, implementation and interpretation

    Matthews, T. J., Borregaard, Michael Krabbe, Ugland, K. I., Borges, P. A. V., Rigal, F., Cardoso, P. & Whittaker, R. J., 2014, In: Ecography. 37, 10, p. 1002-1011 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    The gall mites Vasates quadripedes and Cecidophyopsis psilaspis (Acari: Eriophyidae) new to Denmark

    Bruun, Hans Henrik & Soika, G., 2013, In: Entomologiske Meddelelser. 81, 1, p. 21-25 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    The fungus-growing termite Macrotermes natalensis harbors bacillaene-producing Bacillus sp. that inhibit potentially antagonistic fungi

    Um, S., Fraimout, A., Sapountzis, P., Oh, D. & Poulsen, Michael, 2013, In: Scientific Reports. 3, 7 p., 3250.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    The fungal symbiont of Acromyrmex leaf-cutting ants expresses the full spectrum of genes to degrade cellulose and other plant cell wall polysaccharides

    Grell, M. N., Linde, T., Nygaard, S., Nielsen, K. L., Boomsma, Jacobus J. & Lange, L., 2013, In: B M C Genomics. 14, 11 p., 928.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    The fungal perspective of arbuscular mycorrhizal colonization in 'nonmycorrhizal' plants

    Lekberg, Y., Rosendahl, Søren & Olsson, P. A., 2015, In: New Phytologist. 205, 4, p. 1399-1403 5 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  23. Published

    The functional biogeography of species: biogeographical species roles of birds in Wallacea and the West Indies

    Carstensen, D. W., Dalsgaard, Bo, Svenning, J., Rahbek, Carsten, Fjeldså, Jon, Sutherland, W. J. & Olesen, J. M., Oct 2013, In: Ecography. 36, 10, p. 1097–1105 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    The function of double chees in orange-fronted conures (Aratinga canicularis; Psittacidae)

    Adams, D. M., Balsby, T. J. S. & Bradbury, J. W., 2009, In: Behaviour. 146, 2, p. 171-188

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    The forgotten D: challenges of addressing forest degradation in complex mosaic landscapes under REDD+

    Mertz, O., Müller, D., Sikor, T., Hett, C., Heinimann, A., Castella, J-C., Lestrelin, G., Ryan, C. M., Reay, D. S., Schmidt-Vogt, D., Danielsen, F., Theilade, I., van Noordwijk, M., Verchot, L. V., Burgess, N. D., Berry, N. J., Pham, T. T., Messerli, P., Xu, J., Fensholt, R. & 8 others, Hostert, P., Pflugmacher, D., Bruun, Thilde Bech, de Neergaard, Andreas, Dons, K., Dewi, S., Rutishauser, E. & Sun, Z., 2012, In: Geografisk Tidsskrift/Danish Journal of Geography. 112, 1, p. 63-76 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    The first AsiaEvo conference, connecting Asian evolutionary biologists to the world

    KU, thw266, 2018, In: National Science Review. 5, 5, p. 614-616

    Research output: Contribution to journal › Editorial › Research › peer-review

  27. Published

    The farming ant Sericomyrmex amabilis nutritionally manages its fungal symbiont and social parasite

    Shik, Jonathan Z., Consilio, A., Kaae, T. & Adams, R. M. M., Aug 2018, In: Ecological Entomology. 43, 4, p. 440-446

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    The extrachromosomal circular DNA atlas of aged and young mouse brains

    Hong, X., Li, J., Han, Peng, Li, S., Yu, J., Zhang, H., Li, J., Dang, Y. & Xiang, X., 2024, In: Scientific Data. 11, 1, 8 p., 318.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    The evolutionary significance of incomplete lineage sorting (ILS) in animals

    Li, F., 2021, Department of Biology, Faculty of Science, University of Copenhagen. 281 p.

    Research output: Book/Report › Ph.D. thesis › Research

  30. Published

    The evolutionary history of extinct and living lions

    de Manuel, M., Barnett, R., Sandoval-Velasco, M., Yamaguchi, N., Vieira, F. G., Mendoza, M. L. Z., Liu, S., Martin, M. D., Sinding, M-H. S., Mak, S. S. T., Caroe, C., Liu, S., Guo, C., Zheng, J., Zazula, G., Baryshnikov, G., Eizirik, E., Koepfli, K-P., Johnson, W. E., Antunes, A. & 9 others, Sicheritz-Pontén, Thomas, Gopalakrishnan, Shyam, Larson, G., Yang, H., O'Brien, S. J., Hansen, Anders Johannes, KU, thw266, Marques-Bonet, T. & Gilbert, M Thomas P, 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 20, p. 10927-10934 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    The evolution of social insect mating systems

    Boomsma, Jacobus J., Kronauer, D. J. C. & Pedersen, Jes Søe, Feb 2009, Organization of Insect Societies: From Genome to Sociocomplexity. Gadau, J. & Fewell, J. (eds.). Cambridge, Massachusetts: Harvard University Press, p. 3-25

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  32. Published

    The evolution of queen pheromones in the ant genus Lasius

    Holman, L., Lanfear, R. & D'Ettorre, P., 2013, In: Journal of Evolutionary Biology. 26, 7, p. 1549-1558 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    The evolution of multiqueen breeding in eusocial lineages with permanent physically differentiated castes

    Boomsma, Jacobus J., Huszár, D. B. & Pedersen, Jes Søe, 2014, In: Animal Behaviour. 92, p. 241-252 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    The evolution of multiple mating in army ants

    Kronauer, D. J. C., Johnson, R. A. & Boomsma, Jacobus J., Feb 2007, In: Evolution. 61, 2, p. 413-422 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    The evolution of multicellular complexity: the role of relatedness and environmental constraints

    Fisher, Roberta May, Shik, Jonathan Z. & Boomsma, Jacobus J., 2020, In: Proceedings of the Royal Society B: Biological Sciences. 287, 1931, 8 p., 20192963.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    The evolution of male traits in social insects

    Boomsma, Jacobus J., Baer, B. & Heinze, J., 2005, In: Annual Review of Entomology. 50, p. 395-420 25 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    The evolution of honest queen pheromones in insect societies

    van Zweden, J. S., 2010, In: Communicative & Integrative Biology. 3, 1, p. 1-3

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    The evolution of ancestral and species-specific adaptations in snowfinches at the Qinghai–Tibet Plateau

    Qu, Y., Chen, C., Chen, X., Hao, Y., She, H., Wang, M., Ericson, P. G. P., Lin, H., Cai, T., Song, G., Jia, C., Chen, C., Zhang, H., Li, J., Liang, L., Wu, T., Zhao, J., Gao, Q., Zhang, G., Zhai, W. & 3 others, Zhang, C., Zhang, Y. E. & Lei, F., 2021, In: PNAS. 118, 13, 10 p., e2012398118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    The evolution of alternative parasitic life histories in large blue butterflies

    Als, T. D., Vila, R., Kandul, N. P., Nash, David Richard, Yen, S., Hsu, Y., Mignault, A. A., Boomsma, Jacobus J. & Pierce, N. E., 2004, In: Nature. 432, 7015, p. 386-390 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    The evolution of abdominal microbiomes in fungus-growing ants

    Sapountzis, P., Nash, David Richard, Schiøtt, M. & Boomsma, Jacobus J., 2019, In: Molecular Ecology. 28, 4, p. 879-899 21 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    The era of reference genomes in conservation genomics

    Formenti, G., Theissinger, K., Fernandes, C., Bista, I., Bombarely, A., Bleidorn, C., Ciofi, C., Crottini, A., Godoy, J. A., Höglund, J., Malukiewicz, J., Mouton, A., Oomen, R. A., Paez, S., Palsbøll, P. J., Pampoulie, C., Ruiz-López, M. J., Svardal, H., Theofanopoulou, C., de Vries, J. & 8 others, Waldvogel, A. M., KU, thw266, Mazzoni, C. J., Jarvis, E., Bálint, M., Gilbert, M Thomas P, tsr259, tsr259 & European Reference Genome Atlas (ERGA) Consortium, E. R. G. A. (. C., 2022, In: Trends in Ecology and Evolution. 37, 3, p. 197-202 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    The epiphytic lichen zones in rural Denmark and Schleswig–Holstein

    Søchting, Ulrik & Ramkær, K., 1 Jan 1982, In: Nordic Journal of Botany. 2, 2, p. 171-181 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    The enterobacterium Trabulsiella odontotermitis presents novel adaptations related to its association with fungus-growing termites

    Sapountzis, P., Gruntjes, T., Otani, S., Estevez, J., da Costa, R. R., Plunkett III, G., Perna, N. T. & Poulsen, Michael, 2015, In: Applied and Environmental Microbiology. 81, 19, p. 6577-6588 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    The enormous repetitive Antarctic krill genome reveals environmental adaptations and population insights

    Shao, C., Sun, S., Liu, K., Wang, J., Li, S., Liu, Q., Deagle, B. E., Seim, I., Biscontin, A., Wang, Q., Liu, X., Kawaguchi, S., Liu, Y., Jarman, S., Wang, Y., Wang, H. Y., Huang, G., Hu, J., Feng, B., De Pittà, C. & 29 others, Liu, S., Wang, R., Ma, K., Ying, Y., Sales, G., Sun, T., Wang, X., Zhang, Y., Zhao, Y., Pan, S., Hao, X., Wang, Y., Xu, J., Yue, B., Sun, Y., Zhang, H., Xu, M., Liu, Y., Jia, X., Zhu, J., Liu, S., Ruan, J., KU, thw266, Yang, H., Xu, X., Wang, J., Zhao, X., Meyer, B. & Fan, G., 2023, In: Cell. 186, 6, p. 1279-1294.e19 36 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    The ejaculatory biology of leafcutter ants

    Beckers, Susanne den Boer, Stürup, M., Boomsma, Jacobus J. & Baer, B., 2015, In: Journal of Insect Physiology. 74, p. 56-62 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    The effects of prey patchiness, predator aggregation, and mutual interference on the functional response of Phytoseiulus persimilis feeding on Tetranychus urticae (Acari: Phytoseiidae, Tetranychidae)

    Nachman, Gøsta Støger, 2006, In: Experimental & Applied Acarology. 38, 2-3, p. 87-111 24 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    The effects of pastoralism and protection on lion behaviour, demography and space use in the Mara Region of Kenya

    Mogensen, N. L., Oguto, J. O. & Dabelsteen, Torben, 2011, In: African Zoology. 46, 1, p. 78-87 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    The effects of land-use change on arthropod richness and abundance on Santa Maria Island (Azores): unmanaged plantations favour endemic beetles

    Meijer, S. S., Whittaker, R. J. & Borges, P. A. V., 2011, In: Journal of Insect Conservation. 15, 4, p. 505-522 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    The effects of age and social interactions on innate immunity in a leaf-cutting ant

    Armitage, S. A. O. & Boomsma, Jacobus J., 2010, In: Journal of Insect Physiology. 56, 7, p. 780-787 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    The effect of metapleural gland secretion on the growth of a mutualistic bacterium on the cuticle of leaf-cutting ants

    Poulsen, Michael, Bot, A. N. M. & Boomsma, Jacobus J., 1 Sep 2003, In: Die Naturwissenschaften. 90, 9, p. 406-409 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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