Ecology and Evolution

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  1. Published

    Bird Investigations in Fehmern Belt: Baseline Waterbirds in Fehmarn Belt

    Žydelis, R., Skov, H., Heinänen, S., Dorsch, M., Nehls, G., Spalke, J., Piper, W., Laczny, M., Tøttrup, Anders P., Thorup, Kasper & Durinck, J., 2011, 1 ed. Fehmern A/S. 538 p.

    Research output: Book/Report › Report › Commissioned

  2. Published

    Integrative taxonomy of Central European Planetella (Diptera: Cecidomyiidae) indicates high species diversity, intraspecific variation and low host specificity

    Ševčík, J., Hippa, H., Burdíková, N., Sopuch, K., Skuhravá, M. & Bruun, Hans Henrik, 2023, In: Acta Entomologica Musei Nationalis Pragae. 63, 2, p. 413-450 38 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Spatial genetic structure of the sea sandwort (Honckenya peploides) on Surtsey: an immigrant's journey

    Árnason, S. H., Thórsson, Æ. T., Magnússon, B., Philipp, M., Adsersen, Henning Emil & Anamthawat-Jónsson, K., 2014, In: Biogeosciences. 11, p. 6495-6507 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Four new genera and six new species of lyophylloid agarics (Agaricales, Basidiomycota) from three different continents

    van de Peppel, L. J. J., Aime, M. C., Læssøe, Thomas, Pedersen, O. S., Coimbra, V. R. M., Kuyper, T. W., Stubbe, D., Aanen, D. K. & Baroni, T. J., 2022, In: Mycological Progress. 21, 10, 14 p., 85.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Queen signaling in social wasps

    van Zweden, J. S., Bonckaert, W., Wenseleers, T. & D'Ettorre, P., 2014, In: Evolution. 68, 4, p. 976-986 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Blending of heritable recognition cues among ant nestmates creates distinct colony gestalt odours but prevents within-colony nepotism

    van Zweden, J. S., Brask, J. B., Christensen, Jan H., Boomsma, Jacobus J., Linksvayer, T. A. & D'Ettorre, P., 2010, In: Journal of Evolutionary Biology. 23, 7, p. 1498-1508 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    The evolution of honest queen pheromones in insect societies

    van Zweden, J. S., 2010, In: Communicative & Integrative Biology. 3, 1, p. 1-3

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Nestmate recognition in social insects and the role of hydrocarbons

    van Zweden, J. S. & D'Ettorre, P., 2010, Insect Hydrocarbons.: Biology, Biochemistry , and chemical Ecology. Blomquist, G. J. & Bagnères, A-G. (eds.). Cambridge: Cambridge University Press, Vol. Part 11. p. 222-243

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  9. Published

    Do Cuticular Hydrocarbons Provide Sufficient Information for Optimal Sex Allocation in the Ant Formica exsecta?

    van Zweden, J. S., Vitikainen, E., D'Ettorre, P. & Sundström, L., 2011, In: Journal of Chemical Ecology. 37, 12, p. 1365-1373 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Ant Queen Egg-Marking Signals: Matching Deceptive Laboratory Simplicity with Natural Complexity

    van Zweden, J. S., Heinze, J., Boomsma, Jacobus J. & D'Ettorre, P., 2009, In: PLoS ONE. 4, 3, p. e4718 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Disentangling environmental and heritable nestmate recognition cues in a carpenter ant

    van Zweden, J. S., Dreier, S. & d'Ettorre, P., 2009, In: Journal of Insect Physiology. 55, 2, p. 159-164

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    A statistical approach to identify candidate cues for nestmate recognition

    van Zweden, J., Pontieri, L. & Pedersen, Jes Søe, 2014, In: Frontiers in Ecology and Evolution. 2, 11 p., 73.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Seedling stage strategies as a means of habitat specialization in herbaceous plants

    ten Brink, D. & Bruun, Hans Henrik, 2011, In: P L o S One. 6, 7, 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Variation of extrachromosomal circular DNA in cancer cell lines

    dos Santos, Carl Henrik Rung, Hansen, Lasse Bøllehuus, Rojas Triana, Monica, Johansen, A. Z., Perez-Moreno, Mirna & Regenberg, Birgitte, 2023, In: Computational and Structural Biotechnology Journal. 21, p. 4207-4214 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    A technique to artificially inseminate leafcutter ants

    Beckers, Susanne den Boer, Boomsma, Jacobus J. & Baer, B., 2013, In: Insectes Sociaux. 60, p. 111-118 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    The ejaculatory biology of leafcutter ants

    Beckers, Susanne den Boer, Stürup, M., Boomsma, Jacobus J. & Baer, B., 2015, In: Journal of Insect Physiology. 74, p. 56-62 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Organic amendments increase phylogenetic diversity of arbuscular mycorrhizal fungi in acid soil contaminated by trace elements

    del Mar Montiel-Rozas, M., Lopez Garcia, A., Kjøller, Rasmus, Madejon, E. & Rosendahl, Søren, 2016, In: Mycorrhiza. 26, 6, p. 575-585 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Native soil organic matter as a decisive factor to determine the arbuscular mycorrhizal fungal community structure in contaminated soils

    del Mar Montiel-Rozas, M., Lopez Garcia, A., Madejón, P. & Madejón, E., Apr 2017, In: Biology and Fertility of Soils. 53, 3, p. 327-338 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    The evolutionary history of extinct and living lions

    de Manuel, M., Barnett, R., Sandoval-Velasco, M., Yamaguchi, N., Vieira, F. G., Mendoza, M. L. Z., Liu, S., Martin, M. D., Sinding, M-H. S., Mak, S. S. T., Caroe, C., Liu, S., Guo, C., Zheng, J., Zazula, G., Baryshnikov, G., Eizirik, E., Koepfli, K-P., Johnson, W. E., Antunes, A. & 9 others, Sicheritz-Pontén, Thomas, Gopalakrishnan, Shyam, Larson, G., Yang, H., O'Brien, S. J., Hansen, Anders Johannes, KU, thw266, Marques-Bonet, T. & Gilbert, M Thomas P, 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 20, p. 10927-10934 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Has substrate-dependent co-evolution of enzyme function occured in the attine ant-fungus symbiosis

    de Fine Licht, Henrik Hjarvard, Schiøtt, M. & Boomsma, Jacobus J., 2007. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  21. Published

    Fungal enzymes in the attine ant symbiosis

    de Fine Licht, Henrik Hjarvard, Schiøtt, M. & Boomsma, Jacobus J., 2007.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  22. Published

    The role of enzymes in fungus-growing ant evolution

    de Fine Licht, Henrik Hjarvard, 2009. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  23. Published

    Myrer benytter bioreaktorer

    de Fine Licht, Henrik Hjarvard, 2010, In: Aktuel Naturvidenskab. 4, p. 10-14

    Research output: Contribution to journal › Journal article › Communication

  24. Published

    Variable interaction specificity and symbiont performance in Panamanian Trachymyrmex and Sericomyrmex fungus-growing ants

    de Fine Licht, Henrik Hjarvard & Boomsma, Jacobus J., 2014, In: B M C Evolutionary Biology. 14, 22 p., 244.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    From so simple a beginning: Enzymatic innovation in fungus-growing ants involved a transition from individual symbiont selection to colony-level selection

    de Fine Licht, Henrik Hjarvard, Schiøtt, M. & Boomsma, Jacobus J., 2009. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  26. Published

    Evolution of Fungal enzymes in the attine ant symbiosis

    de Fine Licht, Henrik Hjarvard, Schiøtt, M. & Boomsma, Jacobus J., 2008. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  27. Published

    Laccase gene expression as a possible key adaptation for herbivorous niche expansion in the attine fungus-growing ants

    de Fine Licht, Henrik Hjarvard, Schiøtt, M. & Boomsma, Jacobus J., 2010. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  28. Published

    Laccase gene expression as a possible key adaptation for herbivorous niche expansion in the attine fungus-growing ants

    de Fine Licht, Henrik Hjarvard, Schiøtt, M. & Boomsma, Jacobus J., 2010. 1 p.

    Research output: Contribution to conference › Poster › Research › peer-review

  29. Published

    Co-evolution of enzyme function in the attine ant-fungus symbiosis

    de Fine Licht, Henrik Hjarvard, Schiøtt, M. & Boomsma, Jacobus J., 2008. 1 p.

    Research output: Contribution to conference › Poster › Research › peer-review

  30. Published

    Symbiotic adaptation in the fungal cultivar of leaf-cutting ants

    de Fine Licht, Henrik Hjarvard, Boomsma, Jacobus J. & Tunlid, A., 2014, In: Nature Communications. 5, 10 p., 5675.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Conflict and cooperation between fungi and termites in Macrotermes natalensis

    de Fine Licht, Henrik Hjarvard, Boomsma, Jacobus J. & Aanen, D. K., 2006. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  32. Published

    Laccase gene expression as a possible key adaptation for herbivorous niche expansion in the attine fungus-growing ants

    de Fine Licht, Henrik Hjarvard, Schiøtt, M., Nygaard, S. & Boomsma, Jacobus J., 2010. 1 p.

    Research output: Contribution to conference › Poster › Research

  33. Published

    Variation in fungal enzyme spectra may affect mutualistic division of labour between ants and fungus gardens

    de Fine Licht, Henrik Hjarvard & Boomsma, Jacobus J., 2011. 1 p.

    Research output: Contribution to conference › Poster › Research

  34. Published

    Substrate use and enzyme activity in fungus-growing ants

    de Fine Licht, Henrik Hjarvard, 2009, Biologisk Institut: Museum Tusculanum. 172 p.

    Research output: Book/Report › Ph.D. thesis › Research

  35. Published

    A draft genome sequence of the elusive giant squid, Architeuthis dux

    da Fonseca, R. R., Couto, A., Machado, A. M., Brejova, B., Albertin, C. B., Silva, F., Gardner, P., Baril, T., Hayward, A., Campos, A., Ribeiro, Â. M., Barrio-Hernandez, I., Hoving, H-J., Tafur-Jimenez, R., Chu, C., Frazão, B., Petersen, B., Peñaloza, F., Musacchia, F., Alexander, G. C. & 24 others, Osório, H., Winkelmann, I., Simakov, O., Rasmussen, Simon, Rahman, M. Z., Pisani, D., Vinther, J., Jarvis, E., KU, thw266, Strugnell, J. M., Castro, L. F. C., Fedrigo, O., Patricio, M., Li, Q., Rocha, S., Antunes, A., Wu, Y., Ma, B., Sanges, R., Vinar, T., Blagoev, B., Sicheritz-Pontén, Thomas, Nielsen, Rasmus & Gilbert, M Thomas P, 2020, In: GigaScience. 9, 1, 12 p., giz152.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Population Genomics Reveals the Underlying Structure of the Small Pelagic European Sardine and Suggests Low Connectivity within Macaronesia

    Rodrigues da Fonseca, Rute Andreia, Campos, P. F., Rey de la Iglesia, Alba, Barroso, G. V., Bergeron, Lucie Adrienne, Nande, M., Tuya, F., Abidli, S., Pérez, M., Riveiro, I., Carrera, P., Jurado-Ruzafa, A., Santamaría, M. T. G., Faria, R., Machado, A. M., Fonseca, M. M., Froufe, E. & Castro, L. F. C., 2024, In: Genes. 15, 2, 15 p., 170.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Symbiotic Plant Biomass Decomposition in Fungus-Growing Termites

    da Costa, R. R., Hu, H., Li, H. & Poulsen, Michael, 2019, In: Insects. 10, 4, 15 p., 87.

    Research output: Contribution to journal › Review › Research › peer-review

  38. Published

    Can interaction specificity in the fungus-farming termite symbiosis be explained by nutritional requirements of the fungal crop?

    da Costa, R. R., Vreeburg, S. M. E., Shik, Jonathan Z., Aanen, D. K. & Poulsen, Michael, 2019, In: Fungal Ecology. 38, p. 54-61

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Diversity and transmission of gut bacteria in Atta and Acromyrmex leaf-cutting ants during development

    Zhukova, M., Sapountzis, P., Schiøtt, M. & Boomsma, Jacobus J., 10 Oct 2017, In: Frontiers in Microbiology. 8, 14 p., 1942.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Phylogenomic analysis and metabolic role reconstruction of mutualistic Rhizobiales hindgut symbionts of Acromyrmex leaf-cutting ants

    Zhukova, M., Sapountzis, P., Schiott, M. & Boomsma, Jacobus J., 2022, In: FEMS Microbiology Ecology. 98, 9, 13 p., fiac084.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Unparalleled details of soft tissues in a Cretaceous ant

    Zhuang, Y., Xu, W., KU, thw266, Mai, H., Li, X., He, H., Ran, H. & Liu, Y., 2022, In: BMC Ecology and Evolution. 22, 1, 10 p., 146.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Platypus and echidna genomes reveal mammalian biology and evolution

    Zhou, Y., Shearwin-Whyatt, L., Li, J., Song, Z., Hayakawa, T., Stevens, D., Fenelon, J. C., Peel, E., Cheng, Y., Pajpach, F., Bradley, N., Suzuki, H., Nikaido, M., Damas, J., Daish, T., Perry, T., Zhu, Z., Geng, Y., Rhie, A., Sims, Y. & 22 others, Wood, J., Haase, B., Mountcastle, J., Fedrigo, O., Li, Q., Yang, H., Wang, J., Johnston, S. D., Phillippy, A. M., Howe, K., Jarvis, E. D., Ryder, O. A., Kaessmann, H., Donnelly, P., Korlach, J., Lewin, H. A., Graves, J., Belov, K., Renfree, M. B., Grutzner, F., Zhou, Q. & KU, thw266, 2021, In: Nature. 592, 7856, p. 756-762

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Eighty million years of rapid evolution of the primate Y chromosome

    Zhou, Y., Zhan, X., Jin, J., Zhou, L., Bergman, J., Li, X., Rousselle, M. M. C., Belles, M. R., Zhao, L., Fang, M., Chen, J., Fang, Q., Kuderna, L., Marques-Bonet, T., Kitayama, H., Hayakawa, T., Yao, Y. G., Yang, H., Cooper, D. N., Qi, X. & 3 others, Wu, D. D., Schierup, M. H. & KU, thw266, 2023, In: Nature Ecology and Evolution. 7, 20 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Monotreme Genomes Provide Insights into the Evolution of Early Mammal and Monotreme Sex Chromosomes System

    Zhou, Y., 2019, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  45. Published

    Complex evolutionary trajectories of sex chromosomes across bird taxa

    Zhou, Q., Zhang, J., Bachtrog, D., An, N., Huang, Q., Jarvis, E. D., Gilbert, M Thomas P & KU, thw266, 2014, In: Science. 346, 6215, 8 p., 1246338.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    The origin of domestication genes in goats

    Zheng, Z., Wang, X., Li, M., Li, Y., Yang, Z., Wang, X., Pan, X., Gong, M., Zhang, Y., Guo, Y., Wang, Y., Liu, J., Cai, Y., Chen, Q., Okpeku, M., Colli, L., Cai, D., Wang, K., Huang, S., Sonstegard, T. S. & 16 others, Esmailizadeh, A., Zhang, W., Zhang, T., Xu, Y., Xu, N., Yang, Y., Han, J., Chen, L., Lesur, J., Daly, K. G., Bradley, D. G., Heller, Rasmus, KU, thw266, Wang, W., Chen, Y. & Jiang, Y., 2020, In: Science Advances. 6, 21, eaaz5216.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    SOAPTyping: an open-source and cross-platform tool for sequence-based typing for HLA class I and II alleles

    Zhang, Yong, Chen, Y., Xu, H., Fang, J., Zhao, Z., Hu, W., Yang, X., Ye, J., Cheng, Y., Wang, J., Sun, W., Wang, J., Yang, H., Yan, J. & Fang, L., 2020, In: BMC Bioinformatics. 21, 9 p., 295.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Upretia squamulosa, a new lichen species from the arid valley of Jinsha-Jiang river, China

    Zhang, Y. Y., Wang, X. Y., Li, L. J., Søchting, Ulrik, Yin, A. C., Wang, S. Q. & Wang, L. S., 8 May 2019, In: Phytotaxa. 402, 6, p. 288-294 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    An Indo-Pacific Humpback Dolphin Genome Reveals Insights into Chromosome Evolution and the Demography of a Vulnerable Species

    Zhang, P., Zhao, Y., Li, C., Lin, M., Dong, L., Zhang, R., Liu, M., Li, K., Zhang, H., Liu, X., Zhang, Y., Yuan, Y., Liu, H., Seim, I., Sun, S., Du, X., Chang, Y., Li, F., Liu, S., Lee, S. M. Y. & 13 others, Wang, K., Wang, D., Wang, X., McGowen, M. R., Jefferson, T. A., Olsen, Morten Tange, Stiller, Josefin, KU, thw266, Xu, X., Yang, H., Fan, G., Liu, X. & Li, S., 2020, In: iScience. 23, 10, 52 p., 101640.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    On the Origin and Evolution of RNA Editing in Metazoans

    Zhang, P., 2019, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  51. Published

    On the origin and evolution of RNA editing in metazoans

    Zhang, P., Zhu, Y., Guo, Q., Li, J., Zhan, X., Yu, H., Xie, N., Tan, H., Lundholm, Nina, Garcia-Cuetos, L., Martin, M. D., Subirats, M. A., Su, Y., Ruiz-Trillo, I., Martindale, M. Q., Yu, J., Gilbert, M Thomas P, KU, thw266 & Li, Q., 2023, In: Cell Reports. 42, 2, 22 p., 112112.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Neuroprotectants attenuate hypobaric hypoxia-induced brain injuries in cynomolgus monkeys

    Zhang, P., Chen, J-S., Li, Q-Y., Sheng, L-X., Gao, Y-X., Lu, B-Z., Zhu, W-B., Zhan, X-Y., Li, Y., Yuan, Z-B., Xu, G., Qiu, B-T., Yan, M., Guo, C-X., Wang, Y-Q., Huang, Y-J., Zhang, J-X., Liu, F-Y., Tang, Z-W., Lin, S-Z. & 7 others, Cooper, D. N., Yang, H., Wang, J., Gao, Y., Yin, W., KU, thw266 & Yan, G., 13 Dec 2019, In: Zoological research. 41, 1, p. 3-19 17 p.

    Research output: Contribution to journal › Review › Research › peer-review

  53. Published

    Food-web dynamics under climate change

    Zhang, L., Takahashi, D., Hartvig, M. & Andersen, K. H., 29 Nov 2017, In: Proceedings of the Royal Society B: Biological Sciences. 284, 1867, 8 p., 20171772.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Size-based predictions of food web patterns

    Zhang, L., Hartvig, M., Knudsen, K. & Andersen, K. H., 2014, In: Theoretical Ecology. 7, 1, p. 23-33 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    Improving the ostrich genome assembly using optical mapping data

    Zhang, J., Li, C., Zhou, Q. & KU, thw266, 2015, In: GigaScience. 4, 3 p., 24.

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    The first AsiaEvo conference, connecting Asian evolutionary biologists to the world

    KU, thw266, 2018, In: National Science Review. 5, 5, p. 614-616

    Research output: Contribution to journal › Editorial › Research › peer-review

  57. Published

    Comparative genomics reveals insights into avian genome evolution and adaptation

    Zhang, G., Li, C., Li, Q., Li, B., Larkin, D. M., Lee, C., Storz, J. F., Antunes, A., Greenwold, M. J., Meredith, R. W., Ödeen, A., Cui, J., Zhou, Q., Xu, L., Pan, H., Wang, Z., Jin, L., Zhang, P., Hu, H., Yang, W. & 85 others, Hu, J., Xiao, J., Yang, Z., Liu, Y., Xie, Q., Yu, H., Lian, J., Wen, P., Zhang, F., Li, H., Zeng, Y., Xiong, Z., Liu, S., Zhou, L., Huang, Z., An, N., Wang, J., Zheng, Q., Xiong, Y., Wang, G., Wang, B., Wang, J., Fan, Y., Rodrigues da Fonseca, Rute Andreia, Alfaro Nuñez, L. A., Schubert, Mikkel, Orlando, L. A. A., Mourier, T., Howard, J. T., Ganapathy, G., Pfenning, A., Whitney, O., Rivas, M. V., Hara, E., Smith, J., Farré, M., Narayan, J., Slavov, G., Romanov, M. N., Borges, R., MacHado, J. P., Khan, I., Springer, M. S., Gatesy, J., Hoffmann, F. G., Opazo, J. C., Håstad, O., Sawyer, R. H., Kim, H., Kim, K. W., Kim, H. J., Cho, S., Li, N., Huang, Y., Bruford, M. W., Zhan, X., Dixon, A., Bertelsen, Mads Frost, Derryberry, E., Warren, W., Wilson, R. K., Li, S., Ray, D. A., Green, R. E., O'Brien, S. J., Griffin, D., Johnson, W. E., Haussler, D., Ryder, O. A., Willerslev, Eske, Graves, G. R., Alström, P., Fjeldså, Jon, Mindell, D. P., Edwards, S. V., Braun, E. L., Rahbek, Carsten, Burt, D. W., Houde, P., Zhang, Y., Yang, H., Wang, J., Jarvis, E. D., Gilbert, M Thomas P & Wang, J., 2014, In: Science. 346, 6215, p. 1311-1320 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. Published

    A flock of Genomes

    KU, thw266, Jarvis, E. D. & Gilbert, M Thomas P, 2014, In: Science. 346, 6215, p. 1308-1309 2 p.

    Research output: Contribution to journal › Editorial › Research › peer-review

  59. Published

    Comparative genomic data of the Avian Phylogenomics Project

    KU, thw266, Li, B., Li, C., Gilbert, M Thomas P, Jarvis, E. D., Wang, J. & Avian Genome Consortium, A. G. C., 2014, In: GigaScience. 3, 8 p., 26.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    The bird's-eye view on chromosome evolution

    KU, thw266, 2018, In: Genome Biology. 19, p. 1-3 201.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Comparative Analysis of Bat Genomes Provides Insight into the Evolution of Flight and Immunity

    Zhang, G., Cowled, C., Shi, Z., Huang, Z., Bishop-Lilly, K. A., Fang, X., Wynne, J. W., Xiong, Z., Baker, M. L., Zhao, W., Tachedjian, M., Zhu, Y., Zhou, P., Jiang, X., Ng, J., Yang, L., Wu, L., Xiao, J., Feng, Y., Chen, Y. & 8 others, Sun, X., Zhang, Y., Marsh, G. A., Crameri, G., Broder, C. C., Frey, K. G., Wang, L. & Wang, J., 2013, In: Science (New York, N.Y.). 339, 6118

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    Draft genome of the milu (Elaphurus davidianus)

    Zhang, C., Chen, L., Zhou, Y., Wang, K., Chemnick, L. G., Ryder, O. A., Wang, W., KU, thw266 & Qiu, Q., 2017, In: GigaScience. 7, 2, p. 1-6 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Comparative genomics reveals the hybrid origin of a macaque group

    Zhang, B. L., Chen, W., Wang, Z., Pang, W., Luo, M. T., Wang, S., Shao, Y., He, W. Q., Deng, Y., Zhou, L., Chen, J., Yang, M. M., Wu, Y., Wang, L., Fernández-Bellon, H., Molloy, S., Meunier, H., Wanert, F., Kuderna, L., Marques-Bonet, T. & 10 others, Roos, C., Qi, X. G., Li, M., Liu, Z., Schierup, M. H., Cooper, D. N., Liu, J., Zheng, Y. T., KU, thw266 & Wu, D. D., 2023, In: Science Advances. 9, 22, 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat

    Zepeda Mendoza, M. L., Xiong, Z., Escalera-Zamudio, M., Runge, A. K. W., Thézé, J., Streicker, D., Frank, H. K., Loza-Rubio, E., Liu, S., Ryder, O. A., Castruita, J. A. S., Katzourakis, A., Pacheco, G. A., Taboada, B., Löber, U., Pybus, O. G., Li, Y., Rojas-Anaya, E., Bohmann, K., Carmona Baez, A. & 9 others, Arias, C. F., Liu, S., Greenwood, A. D., Bertelsen, Mads Frost, White, N. E., Bunce, M., KU, thw266, Sicheritz-Ponten, T. & Gilbert, M Thomas P, 2018, In: Nature Ecology & Evolution. 2, 4, p. 659-668 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    DivA: detection of non-homologous and very divergent regions in protein sequence alignments

    Zepeda Mendoza, M. L., Nygaard, S. & Rodrigues da Fonseca, Rute Andreia, 2014, In: BMC Research Notes. 7, 806, 6 p., 806.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    How does Phytoseiulus Persimilis find its prey when foraging within a bean plant?

    Zemek, R., Nachman, Gøsta Støger & Ru°z¿ic¿kova´, S., 2008. 4 p.

    Research output: Contribution to conference › Paper › Research › peer-review

  67. Published

    Morphometrics, Distribution, and DNA Barcoding: An Integrative Identification Approach to the Genus Odontotermes (Termitidae: Blattodea) of Khyber Pakhtunkhwa, Pakistan

    Zaman, M., Khan, I. A., Schmidt, Suzanne, Murphy, Rob & Poulsen, Michael, 2022, In: Forests. 13, 5, 17 p., 674.

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Published

    Human epidermal growth factor receptor 2 status in urothelial bladder carcinoma: Frequency, genomic patterns and clinical significance

    Yu, T., Tao, H., Lv, W., Liang, N., Cui, X., Sui, X., Pan, Y., Wu, S., Xiang, C., Li, Y., Zeng, Y., Li, Conghui, Wang, F., Han, Peng, Wang, W., Yu, G. & Lin, C., 2023, In: Clinical and Translational Discovery. 3, 5, 4 p., e245.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  69. Published

    Circle-seq based method for eccDNA synthesis and its application as a canonical promoter independent vector for robust microRNA overexpression

    Yu, J., Zhang, H., Han, Peng, Jiang, X., Li, J., Li, B., Yang, S., He, C., Mao, S., Dang, Y. & Xiang, X., 2024, In: Computational and Structural Biotechnology Journal. 23, p. 358-368 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    Mudskipper genomes provide insights into the terrestrial adaptation of amphibious fishes

    You, X., Bian, C., Zan, Q., Xu, X., Liu, X., Chen, J., Wang, J., Qiu, Y., Li, W., Zhang, X., Sun, Y., Chen, S., Hong, W., Li, Y., Cheng, S., Fan, G., Shi, C., Liang, J., Tom Tang, Y., Yang, C. & 24 others, Ruan, Z., Bai, J., Peng, C., Mu, Q., Lu, J., Fan, M., Yang, S., Huang, Z., Jiang, X., Fang, X., KU, thw266, Zhang, Y., Polgar, G., Yu, H., Li, J., Liu, Z., Zhang, G., Ravi, V., Coon, S. L., Wang, J., Yang, H., Venkatesh, B., Wang, J. & Shi, Q., 2014, In: Nature Communications. 5, 5594, 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  71. Published

    Comparative phylogeography study reveals introgression and incomplete lineage sorting during rapid diversification of Rhodiola

    You, J., Lougheed, S. C., Zhao, Y., KU, thw266, Liu, W., Lu, F., Wang, Y., Zhang, W., Yang, J., Qiong, L. & Song, Z., 2022, In: Annals of Botany. 129, 2, p. 185-200 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    Evolutionary trajectories of snake genes and genomes revealed by comparative analyses of five-pacer viper

    Yin, W., Wang, Z., Li, Q., Lian, J., Zhou, Y., Lu, B., Jin, L., Qiu, P., Zhang, P., Zhu, W., Wen, B., Huang, Y., Lin, Z., Qiu, Bitao, Su, X., Yang, H., KU, thw266, Yan, G. & Zhou, Q., 2016, In: Nature Communications. 7, 11 p., 13107.

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    Towards a better understanding of the evolution of specialized parasites of fungus-growing ant crops

    Yek, S. H., Boomsma, Jacobus J. & Poulsen, Michael, 2012, In: Psyche (Cambridge, 1874). 2012, 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    Differential gene expression in Acromyrmex leaf-cutting ants after challenges with two fungal pathogens

    Yek, S. H., Boomsma, Jacobus J. & Schiøtt, M., 2013, In: Molecular Ecology. 22, 8, p. 2173-2187 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    The metapleural gland of ants

    Yek, S. H. & Mueller, U. G., 2011, In: Biological Reviews. 86, 4, p. 774-91 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  76. Published

    Regulation and specificity of antifungal metapleural gland secretion in leaf-cutting ants

    Yek, S. H., Nash, David Richard, Jensen, Annette Bruun & Boomsma, Jacobus J., 2012, In: Proceedings of the Royal Society B: Biological Sciences. 279, 1745, p. 4215-4222 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    Surprising leopard restoration in fragmented ecosystems reveals connections as the secret to conservation success

    Yanwen, F., Guojing, Z., Wenqian, D., Yue, W., Jiawei, L., Mengyu, T., Yan, L., Haoran, L., Bing, X., Xiao, J., Enyu, F., Lulu, Z., Jian, C., Lei, Y., Chenghao, W., Yongfeng, C., Guoqiang, C., Yong, Z., Kezi, L., Haitao, Y. & 4 others, Xuemei, H., Jianping, G., Jun, Z. & Limin, F., 2023, In: Science of the Total Environment. 858, 8 p., 159790.

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    Draft genome of the Marco Polo Sheep (Ovis ammon polii)

    Yang, Y., Wang, Y., Zhao, Y., Zhang, X., Li, R., Chen, L., KU, thw266, Jiang, Y., Qiu, Q., Wang, W., Wei, H. & Wang, K., Dec 2017, In: GigaScience. 6, 12, 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Published

    Elusive cats in our backyards: persistence of the North Chinese leopard (Panthera pardus japonensis) in a human-dominated landscape in central China

    Yang, H., Xie, Bing, Zhao, G., Gong, Y., Mou, P., Ge, J. & Feng, L., 2021, In: Integrative Zoology. 16, 1, p. 67-83 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    A draft genome assembly of spotted hyena, Crocuta crocuta

    Yang, C., Li, F., Xiong, Z., Koepfli, K., Ryder, O., Perelman, P., Li, Q. & KU, thw266, 2020, In: Scientific Data. 7, 10 p., 126.

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    Callithrix jacchus (the common marmoset)

    Yang, Chentao & KU, thw266, 2021, In: Trends in Genetics. 37, 10, p. 948-949 2 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  82. Published

    Evolutionary and biomedical insights from a marmoset diploid genome assembly

    Yang, C., Zhou, Y., Marcus, S., Formenti, G., Bergeron, L. A., Song, Z., Bi, X., Bergman, J., Rousselle, M. M. C., Zhou, C., Zhou, L., Deng, Y., Fang, M., Xie, D., Zhu, Y., Tan, S., Mountcastle, J., Haase, B., Balacco, J., Wood, J. & 13 others, Chow, W., Rhie, A., Pippel, M., Fabiszak, M. M., Koren, S., Fedrigo, O., Freiwald, W. A., Howe, K., Yang, H., Phillippy, A. M., Schierup, M. H., Jarvis, E. D. & KU, thw266, 2021, In: Nature. 594, p. 227-233

    Research output: Contribution to journal › Journal article › Research › peer-review

  83. Published

    Evolutionary history influences the effects of water-energy dynamics on oak diversity in Asia

    Xu, X., Wang, Z., Rahbek, Carsten, Lessard, J. & Fang, J., 2013, In: Journal of Biogeography. 40, 11, p. 2146-2155 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  84. Published

    Global beta-diversity of angiosperm trees is shaped by Quaternary climate change

    Xu, W. B., Guo, W. Y., Serra-Diaz, J. M., Schrodt, F., Eiserhardt, W. L., Enquist, B. J., Maitner, B. S., Merow, C., Violle, C., Anand, M., Belluau, M., Bruun, H. H., Byun, C., Catford, J. A., Cerabolini, B. E. L., Chacón-Madrigal, E., Ciccarelli, D., Cornelissen, J. H. C., Dang-Le, A. T., de Frutos, A. & 39 others, Dias, A. S., Giroldo, A. B., Gutiérrez, A. G., Hattingh, W., He, T., Hietz, P., Hough-Snee, N., Jansen, S., Kattge, J., Komac, B., Kraft, N. J. B., Kramer, K., Lavorel, S., Lusk, C. H., Martin, A. R., Ma, K. P., Mencuccini, M., Michaletz, S. T., Minden, V., Mori, A. S., Niinemets, Ü., Onoda, Y., Onstein, R. E., Peñuelas, J., Pillar, V. D., Pisek, J., Pound, M. J., Robroek, B. J. M., Schamp, B., Slot, M., Sun, M., Sosinski, Ê. E., Soudzilovskaia, N. A., Thiffault, N., van Bodegom, P. M., van der Plas, F., Zheng, J., Svenning, J. C. & Ordonez, A., 2023, In: Science Advances. 9, 14, 19 p., eadd8553.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    Dynamic evolutionary history and gene content of sex chromosomes across diverse songbirds

    Xu, L., Auer, G., Peona, V., Suh, A., Deng, Y., Feng, S., KU, thw266, Blom, M. P. K., Christidis, L., Prost, S., Irestedt, M. & Zhou, Q., 2019, In: Nature Ecology and Evolution. 3, 5, p. 834-844 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  86. Published

    Deep sequencing of 1320 genes reveals the landscape of protein-truncating variants and their contribution to psoriasis in 19,973 Chinese individuals

    Xu, H., Zhen, Q., Bai, M., Fang, L., Zhang, Y., Li, B., Ge, H., Moon, S., Chen, W., Fu, W., Xu, Q., Zhou, Y., Yu, Y., Lin, L., Yong, L., Zhang, T., Chen, S., Liu, S., Zhang, H., Chen, R. & 8 others, Cao, L., Zhang, Y., Zhang, R., Yang, H., Hu, X., Akey, J. M., Jin, X. & Sun, L., 2021, In: Genome Research. 31, 7, p. 1150-1158 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    Novel tRNA Gene Rearrangements in the Mitochondrial Genomes of Poneroid Ants and Phylogenetic Implication of Paraponerinae (Hymenoptera: Formicidae)

    Xiong, Z., He, Ding, Guang, X. & Li, Q., 2023, In: Life. 13, 10, 17 p., 2068.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    Draft genome of the leopard gecko, Eublepharis macularius

    Xiong, Z., Li, F., Li, Q., Zhou, L., Gamble, T., Zheng, J., Kui, L., Li, C., Li, S., Yang, H. & KU, thw266, 2016, In: GigaScience. 5, 6 p., 47.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    Enhancing CRISPR-Cas9 gRNA efficiency prediction by data integration and deep learning

    Xiang, X., Corsi, G. I., Anthon, C., Qu, K., Pan, X., Liang, X., Han, P., Dong, Z., Liu, L., Zhong, J., Ma, T., Wang, J., Zhang, X., Jiang, H., Xu, F., Liu, X., Xu, X., Wang, J., Yang, H., Bolund, L. & 4 others, Church, G. M., Lin, L., Gorodkin, Jan & Luo, Y., 2021, In: Nature Communications. 12, 1, 9 p., 3238.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Identification and functional analysis of circulating extrachromosomal circular DNA in schizophrenia implicate its negative effect on the disorder

    Xiang, X., Pan, Xiaoguang, Lv, W., Chen, S., Li, J., Zhang, H., Liao, Y., Yu, J., Li, J., Dang, Y., You, Z., Wang, L., Chen, W., Han, Peng & Tang, J., 2023, In: Clinical and Translational Medicine. 13, 11, 7 p.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  91. Published

    The genome of the fire ant Solenopsis invicta

    Wurm, Y., Wang, J., Riba-Grognuz, O., Corona, M., Nygaard, S., Hunt, B. G., Ingram, K. K., Falquet, L., Nipitwattanaphon, M., Gotzek, D., Dijkstra, M. B., Oettler, J., Comtesse, F., Shih, C-J., Wu, W-J., Yang, C-C., Thomas, J., Beaudoing, E., Pradervand, S., Flegel, V. & 18 others, Cook, E. D., Fabbretti, R., Stockinger, H., Long, L., Farmerie, W. G., Oakey, J., Boomsma, Jacobus J., Pamilo, P., Yi, S. V., Heinze, J., Goodisman, M. A. D., Farinelli, L., Harshman, K., Hulo, N., Cerutti, L., Xenarios, I., Shoemaker, D. & Keller, L., 2011, In: Proceedings of the National Academy of Sciences of the United States of America. 108, 14, p. 5679-84 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    Initiation of the Primate Genome Project

    Wu, D., Qi, X., Yu, L., Li, M., Liu, Z., Yoder, A. D., Roos, C., Hayakawa, T., Rogers, J., Marques-Bonet, T., Su, B., Yao, Y., Zhang, Y. & KU, thw266, 2022, In: Zoological research. 43, 2, p. 147-149 3 p.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  93. Published

    Symbiotic partnerships and their chemical interactions in the leafcutter ants (Hymenoptera: Formicidae)

    Worsley, S. F., Innocent, T. M., Heine, D., Murrell, J. C., Yu, D. W., Wilkinson, B., Hutchings, M. I., Boomsma, Jacobus J. & Holmes, N. A., Aug 2018, In: Myrmecological News. 27, p. 59-74

    Research output: Contribution to journal › Review › Research › peer-review

  94. Published

    Competition-based screening helps to secure the evolutionary stability of a defensive microbiome

    Worsley, S. F., Innocent, T. M., Holmes, N. A., Al-Bassam, M. M., Schiøtt, M., Wilkinson, B., Murrell, J. C., Boomsma, Jacobus J., Yu, D. W. & Hutchings, M. I., 2021, In: BMC Biology. 19, 20 p., 205.

    Research output: Contribution to journal › Journal article › Research › peer-review

  95. Published

    Mid-Holocene coprolites from southern New Zealand provide new insights into the diet and ecology of the extinct little bush moa (Anomalopteryx didiformis)

    Wood, J. R., Vermeulen, M. J., Bolstridge, N., Briden, S., Cole, T. L., Rivera-Perez, J., Shepherd, L. D., Rawlence, N. J. & Wilmshurst, J. M., 2021, In: Quaternary Science Reviews. 263, 12 p., 106992.

    Research output: Contribution to journal › Journal article › Research › peer-review

  96. Published

    Vertical distribution of prokaryotes communities and predicted metabolic pathways in New Zealand wetlands, and potential for environmental DNA indicators of wetland condition

    Wood, J. R., Burge, O. R., Bolstridge, N., Bonner, K., Clarkson, B., Cole, T. L., Davis, C., Fergus, A., King, P., McKeown, M. M., Morse, C., Richardson, S. J., Robertson, H. & Wilmshurst, J. M., 2021, In: PLoS ONE. 16, 1, e0243363.

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    Division of labour in the yeast: Saccharomyces cerevisiae

    Wloch-Salamon, D. M., Fisher, Roberta May & Regenberg, Birgitte, Oct 2017, In: Yeast. 34, 10, p. 399-406 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Using potential distributions to explore determinants of Western Palaearctic migrant songbird species richness in sub-Saharan Africa

    Wisz, M. S., Walther, B. A. & Rahbek, Carsten, 2007, In: Journal of Biogeography. 34, 5, p. 828-841 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Does childhood exposure to biodiverse greenspace reduce the risk of developing asthma?

    Winnicki, M. H., Dunn, R. R., Winther-Jensen, M., Jess, T., Allin, K. H. & Bruun, Hans Henrik, 2022, In: Science of the Total Environment. 850, 11 p., 157853.

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    Range-wide effects of breeding- and nonbreeding-season climate on the abundance of a Neotropical migrant songbird

    Wilson, S., LaDeau, S. L., Tøttrup, Anders P. & Marra, P. P., 2011, In: Ecology. 92, 9, p. 1789-1798 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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