- 2022
- Published
Phylogenomic analysis of Syngnathidae reveals novel relationships, origins of endemic diversity and variable diversification rates
Stiller, Josefin, Short, G., Hamilton, H., Saarman, N., Longo, S., Wainwright, P., Rouse, G. W. & Simison, W. B., 2022, In: BMC Biology. 20, 1, 75.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Phylogenomics resolves ambiguous relationships within Aciculata (Errantia, Annelida)
Tilic, E., Stiller, Josefin, Campos, E., Pleijel, F. & Rouse, G. W., 2022, In: Molecular Phylogenetics and Evolution. 166, 10 p., 107339.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Phylogeny and sex chromosome evolution of palaeognathae
Wang, Z., Zhang, J., Xu, X., Witt, C., Deng, Y., Chen, G., Meng, G., Feng, S., Xu, L., Szekely, T., KU, thw266 & Zhou, Q., 2022, In: Journal of Genetics and Genomics. 49, 2, p. 109-119 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Probing the genomic limits of de-extinction in the Christmas Island rat
Lin, J., Duchene, David, Carøe, C., Smith, O., Ciucani, M. M., Niemann, Jonas, Richmond, D., Greenwood, A. D., MacPhee, R., KU, thw266, Gopalakrishnan, Shyam & Gilbert, M Thomas P, 2022, In: Current Biology. 32, 7, p. 1650-1656.e3Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Scaling of maneuvering performance in baleen whales: larger whales outperform expectations
Segre, P. S., Gough, W. T., Roualdes, E. A., Cade, D. E., Czapanskiy, M. F., Fahlbusch, J., Kahane-Rapport, S. R., Oestreich, W. K., Bejder, L., Bierlich, K. C., Burrows, J. A., Calambokidis, J., Chenoweth, E. M., di Clemente, J., Durban, J. W., Fearnbach, H., Fish, F. E., Friedlaender, A. S., Hegelund, P., Johnston, D. W. & 13 others, , 2022, In: Journal of Experimental Biology. 225, 5, 15 p., jeb243224.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Scrub encroachment promotes biodiversity in temperate European wetlands under eutrophic conditions
Brunbjerg, A. K., Fløjgaard, C., Frøslev, Tobias Guldberg, Andersen, D. K., Bruun, Hans Henrik, Dalby, L., Goldberg, I., Lehmann, L. J., Moeslund, J. E. & Ejrnæs, R., 2022, In: Ecology and Evolution. 12, 11, 19 p., e9445.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Simple attributes predict the value of plants as hosts to fungal and arthropod communities
Bruun, Hans Henrik, Brunbjerg, A. K., Dalby, L., Fløjgaard, C., Frøslev, Tobias Guldberg, Haarder, S., Heilmann-Clausen, Jacob, Høye, T. T., Læssøe, Thomas & Ejrnæs, R., 2022, In: Oikos. 2022, 4, 11 p., e08823.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Single-cell RNA sequencing technologies and applications: A brief overview
Jovic, D., Liang, Xue, Zeng, H., Lin, L., Xu, F. & Luo, Y., 2022, In: Clinical and Translational Medicine. 12, 3, 20 p., e694.Research output: Contribution to journal › Review › Research › peer-review
- Published
Social environment affects sensory gene expression in ant larvae
Pulliainen, U., Morandin, C., Bos, N., Sundström, L. & Schultner, E., 2022, In: Insect Molecular Biology. 31, 1, p. 1-9 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spatial and Temporal Patterns of Genetic Diversity and Structure in Danish Populations of the Alcon Blue Butterfly Phengaris alcon (Denis & Schiffermüller)
Boe, A. M. B., Simonsen, T. J., Colding-Jørgensen, Camilla Tvede, Folman, P. H., Jensen, T. T., Spencer, K. J., Thomsen, P. F. & Nash, David Richard, 2022, In: Diversity. 14, 12, 1098.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Species-specific traits mediate avian demographic responses under past climate change
Germain, Ryan Ross, Feng, S., Chen, G., Graves, G. R., Tobias, J. A., Rahbek, Carsten, Lei, F., Fjeldså, Jon, Hosner, Peter Andrew, Gilbert, M Thomas P, KU, thw266 & Nogues, David Bravo, 2022, bioRxiv, 24 p.Research output: Working paper › Preprint › Research
- Published
Specific gut bacterial responses to natural diets of tropical birds
Bodawatta, Kasun Harshana, Klečková, I., Klečka, J., Pužejová, K., Koane, B., Poulsen, Michael, Jønsson, Knud Andreas & Sam, K., 2022, In: Scientific Reports. 12, 15 p., 713.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sperm Storage Costs Determine Survival and Immunocompetence in Newly Mated Queens of the Leaf-Cutting Ant Atta colombica
Baer-Imhoof, B., Beckers, Susanne den Boer, Boomsma, Jacobus J. & Baer, B., 2022, In: Frontiers in Ecology and Evolution. 9, 10 p., 759183.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Standards recommendations for the Earth BioGenome Project
Lawniczak, M. K. N., Durbin, R., Flicek, P., Lindblad-Toh, K., Wei, X., Archibald, J. M., Baker, W. J., Belov, K., Blaxter, M. L., Bonet, T. M., Childers, A. K., Coddington, J. A., Crandall, K. A., Crawford, A. J., Davey, R. P., Palma, F. D., Fang, Q., Haerty, W., Hall, N., Hoff, K. J. & 25 others, , 2022, In: PNAS. 119, 4, 8 p., e2115639118.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Successful treatment of psoriasis with adalimumab induced no changes in the gut microbiota
Todberg, T., Egeberg, Alexander, Zachariae, Claus, Sørensen, N., Pedersen, Oluf Borbye & Skov, Lone, 2022, In: Journal of the European Academy of Dermatology and Venereology. 36, 6, p. e464-e467 4 p.Research output: Contribution to journal › Comment/debate › Research
- Published
Targeted removal of mitochondrial DNA from mouse and human extrachromosomal circular DNA with CRISPR-Cas9
Feng, Weijia, Arrey Tané, Gerard, Zole, Egija, Iv, W., Liang, Xue, Han, Peng, Mohiyuddin, M., Pilegaard, Henriette & Regenberg, Birgitte, 2022, In: Computational and Structural Biotechnology Journal. 20, p. 3059-3067 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Earth BioGenome Project 2020: Starting the clock
Lewin, H. A., Richards, S., Aiden, E. L., Allende, M. L., Archibald, J. M., Bálint, M., Barker, K. B., Baumgartner, B., Belov, K., Bertorelle, G., Blaxter, M. L., Cai, J., Caperello, N. D., Carlson, K., Castilla-Rubio, J. C., Chaw, S. M., Chen, L., Childers, A. K., Coddington, J. A., Conde, D. A. & 65 others, , 2022, In: PNAS. 119, 4, 7 p., e2115635118.Research output: Contribution to journal › Review › Research › peer-review
- Published
The First Genome of the Balearic Shearwater (Puffinus mauretanicus) Provides a Valuable Resource for Conservation Genomics and Sheds Light on Adaptation to a Pelagic lifestyle
Cuevas-Caballé, C., Ferrer Obiol, J., Vizueta Moraga, Joel, Genovart, M., Gonzalez-Solís, J., Riutort, M. & Rozas, J., 2022, In: Genome Biology and Evolution. 14, 5, 14 p., evac067.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Mutationathon highlights the importance of reaching standardization in estimates of pedigree-based germline mutation rates
Bergeron, Lucie Adrienne, Besenbacher, S., Turner, T. N., Versoza, C. J., Wang, R. J., Price, A. L., Armstrong, E., Riera, M., Carlson, J., Chen, Hwei-Yen, Hahn, M. W., Harris, K., Kleppe, A. S., López-Nandam, E. H., Moorjani, P., Pfeifer, S. P., Tiley, G. P., Yoder, A. D., KU, thw266 & Schierup, M. H., 2022, In: eLife. 11, 28 p., e73577.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Native Bees of Lolland (Denmark) Revisited after 100 Years: The Demise of the Specialists
Rasmussen, C., Kjær Sydenham, M. A., Schmidt, H. T. & Madsen, Henning Bang, 2022, In: Insects. 13, 2, 17 p., 153.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The biodiversity effect of reduced tillage on soil microbiota
Frøslev, Tobias Guldberg, Nielsen, Ida Broman, Santos, S. S., Barnes, Christopher James, Bruun, Hans Henrik & Ejrnæs, R., 2022, In: Ambio. 51, 4, p. 1022-1033 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The chemical ecology of the fungus-farming termite symbiosis
Schmidt, Suzanne, Kildgaard, S., Guo, H., Beemelmanns, C. & Poulsen, Michael, 2022, In: Natural Product Reports. 39, 2, p. 231-248 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The chromosome-scale assembly of the Canary Islands endemic spider Dysdera silvatica (Arachnida, Araneae) sheds light on the origin and genome structure of chemoreceptor gene families in chelicerates
Escuer, P., Pisarenco, V. A., Fernandez-Ruiz, A. A., Vizueta, J., Sanchez-Herrero, J. F., Arnedo, M. A., Sanchez-Gracia, A. & Rozas, J., 2022, In: Molecular Ecology Resources. 22, 1, p. 375-390 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The co-existence of multiple oak leaf flushes contributes to the large within-tree variation in chemistry, insect attack and pathogen infection
Gaytán, Á., Moreira, X., Castagneyrol, B., Van Halder, I., De Frenne, P., Meeussen, C., Timmermans, B. G. H., Ten Hoopen, J. P. J. G., Rasmussen, P. U., Bos, N., Jaatinen, R., Pulkkinen, P., Söderlund, S., Covelo, F., Gotthard, K. & Tack, A. J. M., 2022, In: New Phytologist. 235, 4, p. 1615-1628 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The drivers of avian-haemosporidian prevalence in tropical lowland forests of New Guinea in three dimensions
Vinagre-Izquierdo, C., Bodawatta, Kasun Harshana, Chmel, K., Renelies-Hamilton, J., Paul, L., Munclinger, P., Poulsen, Michael & Jønsson, Knud Andreas, 2022, In: Ecology and Evolution. 12, 2, 14 p., e8497.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The era of reference genomes in conservation genomics
Formenti, G., Theissinger, K., Fernandes, C., Bista, I., Bombarely, A., Bleidorn, C., Ciofi, C., Crottini, A., Godoy, J. A., Höglund, J., Malukiewicz, J., Mouton, A., Oomen, R. A., Paez, S., Palsbøll, P. J., Pampoulie, C., Ruiz-López, M. J., Svardal, H., Theofanopoulou, C., de Vries, J. & 8 others, , 2022, In: Trends in Ecology and Evolution. 37, 3, p. 197-202 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The genomic basis of the plant island syndrome in Darwin’s giant daisies
Cerca, J., Petersen, B., Lazaro-Guevara, J. M., Rivera-Colón, A., Birkeland, S., Vizueta, J., Li, S., Li, Q., Loureiro, J., Kosawang, C., Díaz, P. J., Rivas-Torres, G., Fernández-Mazuecos, M., Vargas, P., McCauley, R. A., Petersen, G., Santos-Bay, L., Wales, N., Catchen, J. M., Machado, D. & 9 others, , 2022, In: Nature Communications. 13, 13 p., 3729.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The rebellious circles: Phenotypic consequences of circular DNAs in eukaryotic genomes
Arrey Tané, Gerard, 2022, Department of Biology, Faculty of Science, University of Copenhagen. 200 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Transcription of the Alginate Operon in Pseudomonas aeruginosa Is Regulated by c-di-GMP
Liang, Z., Rybtke, Morten Levin, Kragh, K. N., Johnson, O., Schicketanz, Muriel Leandra, Zhang, Yong, Andersen, Jens Bo & Tolker-Nielsen, Tim, 2022, In: Microbiology Spectrum. 10, 4, 13 p., e00675-22.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transcriptome innovations in primates revealed by single-molecule long-read sequencing
Ferrández-Peral, L., Zhan, X., Alvarez-Estape, M., Chiva, C., Esteller-Cucala, P., García-Pérez, R., Julià, E., Lizano, E., Fornas, Ò., Sabidó, E., Li, Q., Marquès-Bonet, T., Juan, D. & KU, thw266, 2022, In: Genome Research. 32, 8, p. 1448-1462 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transcriptomic signatures responding to PKM2 activator TEPP-46 in the hyperglycemic human renal proximal epithelial tubular cells
Wang, Z., Yu, J., Hao, Dan, Liu, X. & Wang, X., 2022, In: Frontiers in Endocrinology. 13, 16 p., 965379.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Tripartite Symbiotic Digestion of Lignocellulose in the Digestive System of a Fungus-Growing Termite
Ahmad, F., Yang, G., Zhu, Y., Poulsen, Michael, Li, W., Yu, T. & Mo, J., 2022, In: Microbiology Spectrum. 10, 6, 18 p., e01234-22.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Understanding Yeast Phenotypes via the Evolution of Synthetic Genome
Wang, Y., 2022, Department of Biology, Faculty of Science, University of Copenhagen. 222 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Unparalleled details of soft tissues in a Cretaceous ant
Zhuang, Y., Xu, W., KU, thw266, Mai, H., Li, X., He, H., Ran, H. & Liu, Y., 2022, In: BMC Ecology and Evolution. 22, 1, 10 p., 146.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Validation of Potential Reference Genes for Real-Time qPCR Analysis in Pharaoh Ant, Monomorium pharaonis (Hymenoptera: Formicidae)
Ding, G., Gao, Q., Chen, J., Zhao, J., KU, thw266 & Liu, W., 2022, In: Frontiers in Physiology. 13, 9 p., 852357.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Vandløbenes CO2-overmætning og biodiversitet
Sand-Jensen, Kaj, Martinsen, K. T., Kjær, Johan Emil, Sø, Jonas Stage, Baumane, M., Kragh, T., Båstrup-Spohr, Lars, Bruun, Hans Henrik & Riis, T., 2022, In: Vand & Jord. 2, p. 44-48Research output: Contribution to journal › Journal article › Communication
- Published
WANNABEES - forklædt som bi
Dupont, Y. L. & Madsen, Henning Bang, 2022, In: Haven. 8, p. 76-79Research output: Contribution to journal › Journal article › Communication
- Published
Whole genome analyses based on single, field collected spores of the arbuscular mycorrhizal fungus Funneliformis geosporum
Sahraei, S. E., Sánchez-García, M., Montoliu-Nerin, M., Manyara, D., Bergin, C., Rosendahl, Søren & Rosling, A., 2022, In: Mycorrhiza. 32, 5-6, p. 361-371 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Why sequence all eukaryotes?
Blaxter, M., Archibald, J. M., Childers, A. K., Coddington, J. A., Crandall, K. A., Di Palma, F., Durbin, R., Edwards, S. V., Graves, J. A. M., Hackett, K. J., Hall, N., Jarvis, E. D., Johnson, R. N., Karlsson, E. K., Kress, W. J., Kuraku, S., Lawniczak, M. K. N., Lindblad-Toh, K., Lopez, J. V., Moran, N. A. & 7 others, , 2022, In: Proceedings of the National Academy of Sciences of the United States of America. 119, 4, 9 p., e2115636118.Research output: Contribution to journal › Journal article › Research › peer-review
- 2021
- Published
Rewilding: Hvor mange store dyr har den danske natur egentlig plads til?
Ejrnæs, R., Bruun, Hans Henrik & Svenning, J., 19 Aug 2021, In: ForskerZonen.Research output: Contribution to journal › Contribution to newspaper - Comment/debate › Communication
- Published
Biologer afviser kritik: Derfor er rewilding en vigtig del af naturgenopretning
Ejrnæs, R., Bruun, Hans Henrik & Svenning, J., 5 Aug 2021, In: ForskerZonen.Research output: Contribution to journal › Contribution to newspaper - Comment/debate › Communication
- Published
Comparative Genomics Reveals Prophylactic and Catabolic Capabilities of Actinobacteria within the Fungus-Farming Termite Symbiosis
Murphy, Rob, Benndorf, R., de Beer, Z. W., Vollmers, J., Kaster, A., Beemelmanns, C. & Poulsen, Michael, Mar 2021, In: mSphere. 6, 2, 12 p., e01233-20.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Callithrix jacchus (the common marmoset)
Yang, Chentao & KU, thw266, 2021, In: Trends in Genetics. 37, 10, p. 948-949 2 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Crystallicutis gen. nov. (Irpicaceae, Basidiomycota), including C. damiettensis sp. nov., found on Phoenix dactylifera (date palm) trunks in the Nile Delta of Egypt
El-Gharabawy, H. M., A. Leal-Dutra, Caio & Griffith, G. W., 2021, In: Fungal Biology. 125, 6, p. 447-458 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Lobaria pulmonaria (L.) Hoffm. in the southwestern Baltic – Kattegat area
Schiefelbein, U., Arnfred, T., Dolnik, C., Neumann, P., Ossowska, E., Poulsen, R., Søchting, Ulrik & Thell, A., 2021, In: Folia Cryptogamica Estonica. 58, p. 183-197Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Obscuroplaca gen. nov. – a replacement name for Phaeoplaca; Teloschistaceae (lichenized Ascomycota) from the Galapagos Islands
Bungartz, F., Søchting, Ulrik & Arup, U., 2021, In: Plant and Fungal Systematics. 66, 2, p. 240-241 2 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
A Relationship between the Characteristics of the Oval Nucleus of the Mesopallium and Parrot Vocal Response to Playback
Walløe, S., Chakraborty, M., Balsby, T. J. S., Jarvis, E. D., Dabelsteen, Torben & Pakkenberg, B., 2021, In: Brain, Behavior and Evolution. 96, 1, p. 37-48 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A comparison of tools for copy-number variation detection in germline whole exome and whole genome sequencing data
Gabrielaite, M., Torp, M. H., Rasmussen, Malthe Sebro, Andreu-Sánchez, S., Vieira, Filipe Garrett, Pedersen, C. B., Kinalis, S., Madsen, M. B., Kodama, M., Demircan, G. S., Simonyan, A., Yde, C. W., Olsen, L. R., Marvig, R. L., Østrup, O., Rossing, Caroline Maria, Nielsen, Finn Cilius, Winther, Ole & Bagger, F. O., 2021, In: Cancers. 13, 24, 6283.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A new duck genome reveals conserved and convergently evolved chromosome architectures of birds and mammals
Li, J., Zhang, J., Liu, J., Zhou, Y., Cai, C., Xu, L., Dai, X., Feng, S., Guo, C., Rao, J., Wei, K., Jarvis, E. D., Jiang, Y., Zhou, Z., KU, thw266 & Zhou, Q., 2021, In: GigaScience. 10, 1, 15 p., giaa142.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A new emu genome illuminates the evolution of genome configuration and nuclear architecture of avian chromosomes
Liu, J., Wang, Z., Li, J., Xu, L., Liu, J., Feng, S., Guo, C., Chen, S., Ren, Z., Rao, J., Wei, K., Chen, Y., Jarvis, E. D., KU, thw266 & Zhou, Q., 2021, In: Genome Research. 31, 3, p. 497-511 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Danmarks biodiversitets fremtid: de væsentligste udfordringer og højest prioriterede virkemidler
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Kommenteret checkliste over Danmarks bier – Del 3: Melittidae & Megachilidae (Hymenoptera, Apoidea)
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Leucoagaricus gongylophorus uses leaf-cutting ants to vector proteolytic enzymes towards new plant substrate
Research output: Contribution to journal › Journal article › Research › peer-review
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Complexity of avian evolution revealed by family-level genomes
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A region of suppressed recombination misleads neoavian phylogenomics
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High germline mutation rates, but not extreme population outbreaks, influence genetic diversity in a keystone coral predator
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