Department of Biology

 

 
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  1. Published

    Synchronized switching of multiple toxin-antitoxin modules by (p)ppGpp fluctuation

    Tian, C., Semsey, S. & Mitarai, Namiko, 21 Aug 2017, In: Nucleic Acids Research. 45, 14, p. 8180-8189 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Rapid Curtailing of the Stringent Response by Toxin-Antitoxin Encoded mRNases

    Tian, C., Roghanian, Mohammad, Jørgensen, M. G., Sneppen, Kim, Sørensen, Michael Askvad, Gerdes, K. & Mitarai, Namiko, Jul 2016, In: Journal of Bacteriology. 198, 14, p. 1918-1926

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    What does evolution tell us about the structure of a functional amyloid protein?

    Tian, P., Boomsma, Wouter, Wang, Y., Otzen, D. E., Jensen, Mogens Høgh & Lindorff-Larsen, Kresten, 2015, In: Biophysical Journal. 108, 2, Supplement 1, p. 227a 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  4. Published

    Structure of a functional amyloid protein subunit computed using sequence variation

    Tian, P., Boomsma, Wouter, Wang, Y., Otzen, D., Jensen, Mogens Høgh & Lindorff-Larsen, Kresten, 2015, In: Journal of the American Chemical Society. 137, 1, p. 22–25 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    A Monte Carlo study of the early steps of functional amyloid formation

    Tian, P., Lindorff-Larsen, Kresten, Boomsma, Wouter, Jensen, Mogens Høgh & Otzen, D. E., 2016, In: P L o S One. 11, 1, 18 p., e0146096.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Robust estimation of diffusion-optimized ensembles for enhanced sampling

    Tian, P., Jónsson, S. Æ., Ferkinghoff-Borg, J., Krivov, S. V. .., Lindorff-Larsen, Kresten, Irbäck, A. & Boomsma, Wouter, 2014, In: Journal of Chemical Theory and Computation. 10, 2, p. 543–553 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Whole-genome sequence of the planarian Dugesia japonica combining Illumina and PacBio data

    Tian, Q., Guo, Q., Guo, Y., Luo, L., Kristiansen, Karsten, Han, Z., Fang, H. & Zhang, S., 2022, In: Genomics. 114, 2, 10 p., 110293.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    PyInteraph: a framework for the analysis of interaction networks in structural ensembles of proteins

    Tiberti, M., Invernizzi, G., Lambrughi, M., Inbar, Y., Schreiber, G. & Papaleo, E., 2014, In: Journal of Chemical Information and Modeling. 54, 5, p. 1537-1551 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    ENCORE: Software for Quantitative Ensemble Comparison

    Tiberti, M., Papaleo, E., Bengtsen, T., Boomsma, Wouter & Lindorff-Larsen, Kresten, 2015, In: PLoS Computational Biology. 11, 10, 16 p., e1004415.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Efficient refolding and reconstitution of tissue factor into nanodiscs facilitates structural investigation of a multicomponent system on a lipid bilayer

    Tidemand, Frederik Grønbæk, Østergaard, H., Ploug, Michael, Kragelund, Birthe Brandt & Arleth, Lise, 2020, In: Biochimica et Biophysica Acta - Biomembranes. 1862, 6, 10 p., 183214.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Treatment with the anti-IgE monoclonal antibody omalizumab in women with asthma undergoing fertility treatment: a proof-of-concept study - The PRO-ART study protocol

    Tidemandsen, C., Juul Gade, E., Ulrik, Charlotte Suppli, Nielsen, Henriette Svarre, Oxlund-Mariegaard, B. S., Kristiansen, Karsten, Freiesleben, Nina la Cour, Nøhr, B., Udengaard, H. & Backer, Vibeke, 2020, In: BMJ Open. 10, 11, 7 p., e037041.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Interpreting the molecular mechanisms of disease variants in human transmembrane proteins

    Tiemann, Johanna Katarina Sofie, Zschach, Henrike, Lindorff-Larsen, Kresten & Stein, Amelie, 2023, In: Biophysical Journal. 122, 11, 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Climatic warming increases isoprene emission from a subarctic heath

    Tiiva, P., Faubert, P., Michelsen, Anders, Holopainen, T., Holopainen, J. K. & Rinnan, R., 2008, In: New Phytologist. 180, p. 853-863

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Contribution of vegetation and water table on isoprene emission from boreal peatland microcosms

    Tiiva, P., Faubert, P., Räty, S., Holopainen, J. K., Holopainen, T. & Rinnan, Riikka, 2009, In: Atmospheric Environment. 43, 34, p. 5469–5475

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Monoterpene emissions in response to long-term night-time warming, elevated CO2 and extended summer drought in a temperate heath ecosystem

    Tiiva, P., Tang, Jing, Michelsen, Anders & Rinnan, Riikka, 2017, In: Science of the Total Environment. 580, p. 1056-1067 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    More is needed — Thousands of loci are required to elucidate the relationships of the ‘flowers of the sea’ (Sabellida, Annelida)

    Tilic, E., Sayyari, E., Stiller, Josefin, Mirarab, S. & Rouse, G. W., 2020, In: Molecular Phylogenetics and Evolution. 9 p., 106892.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    The cellular 3D printer of a marine bristle worm—chaetogenesis in Platynereis dumerilii (Audouin & Milne Edwards, 1834) (Annelida)

    Tilic, E., Herkenrath, T., Kirfel, G. & Bartolomaeus, T., 2023, In: Cell and Tissue Research. 391, p. 305-322

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Phylogenomics resolves ambiguous relationships within Aciculata (Errantia, Annelida)

    Tilic, E., Stiller, Josefin, Campos, E., Pleijel, F. & Rouse, G. W., 2022, In: Molecular Phylogenetics and Evolution. 166, 10 p., 107339.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Allelopathic effects of Alexandrium tamarense on other algae: evidence from mixed growth experiments

    Tillmann, U. & Hansen, Per Juel, 2009, In: Aquatic Microbial Ecology. 57, 1, p. 101-112 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Characterization of Divalent Cation Interactions with AASTY Nanodiscs

    Timcenko, Milena, Autzen, A. A. A. & Autzen, Henriette Elisabeth, 2022, In: ACS Applied Polymer Materials. 4, 2, p. 1071-1083

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Diffusion-driven instability in a predator-prey system with time-varying diffusitivities

    Timm, U. & Okubo, A., 1992, In: J. Math. Biol.. 30, p. 307-320

    Research output: Contribution to journal › Journal article › Research

  22. Published

    Self- and mutual shading effect on competing algal distribution

    Timm, U., Tataro, S. & Okubo, A., 1991, In: Nonlinear Analysis - Theory Methods and Applications. 17(6), p. 559-576

    Research output: Contribution to journal › Journal article › Research

  23. Published

    Gyrotaxis: Interaction between algae and flagellates

    Timm, U. & Okubo, A., 1995, In: Bull.Math.Biol.. 57 (5), p. 631-650

    Research output: Contribution to journal › Journal article › Research

  24. Published

    Self- and mutual shading and competition effect on competing algae distributions: Biological implications of the model

    Timm, U., Klinck, J. M. & Okubo, A., 1992, In: Ecol. Modelling. 59, p. 11-36

    Research output: Contribution to journal › Journal article › Research

  25. Published

    Vertical phytoplankton distributions: patterns and analytical solutions

    Timm, U., 1994, In: J.Biol.Syst.. 2 (2), p. 137-163

    Research output: Contribution to journal › Journal article › Research

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