- 2022
- Published
A multi-omics approach unravels metagenomic and metabolic alterations of a probiotic and synbiotic additive in rainbow trout (Oncorhynchus mykiss)
Rasmussen, Jacob Agerbo, Villumsen, Kasper Rømer, Ernst, M., Hansen, M., Forberg, T., Gopalakrishnan, Shyam, Gilbert, M Thomas P, Bojesen, Anders Miki, Kristiansen, Karsten & Limborg, Morten Tønsberg, 2022, In: Microbiome. 10, 19 p., 21.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A novel and affordable bioaugmentation strategy with microbial extracts to accelerate the biodegradation of emerging contaminants in different media
Aguilar-Romero, I., van Dillewijn, P., Nesme, Joseph, Sørensen, Søren Johannes, Nogales, R., Delgado-Moreno, L. & Romero, E., 2022, In: Science of the Total Environment. 834, 10 p., 155234.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A novel approach for the non-invasive diagnosis of pulmonary nodules using low-depth whole-genome sequencing of cell-free DNA
Zhang, B., Liang, H., Liu, W., Zhou, X., Qiao, S., Li, F., Tian, P., Li, C., Ma, Y., Zhang, H., Zhang, Z., Nanjo, S., Russo, A., Puig-Butillé, J. A., Wu, K., Wang, C., Zhao, X. & Yue, D., 2022, In: Translational Lung Cancer Research. 11, 10, p. 2094-2110 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A pilot study of assessing whole genome sequencing in newborn screening in unselected children in China
Jian, M., Wang, X., Sui, Y., Fang, M., Feng, C., Huang, Y., Liu, C., Guo, R., Guan, Y., Gao, Y., Wang, Z., Li, S., Cheng, B., Sun, L., Cui, F., Guo, J., Zhan, Y., Zhang, G., Zheng, L., Su, F. & 14 others, , 2022, In: Clinical and Translational Medicine. 12, 6, 12 p., e843.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
A polygenic architecture with habitat-dependent effects underlies ecological differentiation in Silene
Gramlich, S., Liu, Xiaodong, Favre, A., Buerkle, C. A. & Karrenberg, S., 2022, In: New Phytologist. 235, 4, p. 1641-1652 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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A review on ethnobotany, phytochemistry, and pharmacology of the genus Didymocarpus wall. (Gesneriaceae)
Nanjala, C., Odago, W. O., Rono, P. C., Waswa, E. N., Mutinda, E. S., Oulo, M. A., Muema, F. W., Wanga, V. O., Mkala, E. M., Kuja, J., Njire, M. M. & Hu, G. W., 2022, In: Journal of Ethnopharmacology. 295, 25 p., 115404.Research output: Contribution to journal › Review › Research › peer-review
- Published
A short prokaryotic Argonaute activates membrane effector to confer antiviral defense
Zeng, Z., Chen, Y., Pinilla Redondo, Rafael, Shah, S. A., Zhao, F., Wang, C., Hu, Z., Wu, C., Zhang, C., Whitaker, R. J., She, Q. & Han, W., 2022, In: Cell Host and Microbe. 30, 7, p. 930-943.e6 21 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A simple, rapid, and practical method for single-cell proteomics based on mass-adaptive coating of synthetic peptides
Li, S., Su, K., Zhuang, Z., Qin, Q., Gao, L., Deng, Y., Liu, X., Hou, G., Wang, L., Hao, P., Yang, H., Liu, S., Zhu, H. & Ren, Y., 2022, In: Science Bulletin. 67, 6, p. 581-584 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A single-cell transcriptomic atlas tracking the neural basis of division of labour in an ant superorganism
Li, Q., Wang, M., Zhang, P., Liu, Y., Guo, Q., Zhu, Y., Wen, T., Dai, X., Zhang, X., Nagel, M., Dethlefsen, B. H., Xie, N., Zhao, J., Jiang, W., Han, L., Wu, L., Zhong, W., Wang, Z., Wei, X., Dai, W. & 9 others, , 2022, In: Nature Ecology & Evolution. 6, 8, p. 1191-1204Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A structural biology community assessment of AlphaFold2 applications
Akdel, M., Pires, D. E., Porta Pardo, E., Jänes, J., Zalevsky, A. O., Meszaros, B., Bryant, P., Good, L. L., Laskowski, R. A., Pozzati, G., Shenoy, A., Zhu, W., Kundrotas, P., Serra, V. R., Rodrigues, C. H. M., Dunham, A. S., Burke, D., Borkakoti, N., Velankar, S., Frost, A. & 14 others, , 2022, In: Nature Structural & Molecular Biology. 29, 11, 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A synthesis of the external morphology of cypridiform larvae of Facetotecta (crustacea: Thecostraca) and the limits of the genus Hansenocaris
Kolbasov, G. A., Savchenko, A. S., Dreyer, N., Chan, B. K. K. & Høeg, Jens Thorvald, 2022, In: Ecology and Evolution. 12, 11, 21 p., e9488.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A two-step metagenomics approach for the identification and mitochondrial DNA contig assembly of vertebrate prey from the blood meals of common vampire bats (Desmodus rotundus)
Chua, Physilia, Carøe, C., Crampton-Platt, A., Reyes-Avila, C. S., Jones, G., Streicker, D. G. & Bohmann, Kristine, 2022, In: Metabarcoding and Metagenomics. 6, p. 75-87 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A unifying model for extrachromosomal circular DNA load in eukaryotic cells
Arrey Tané, Gerard, Keating, S. T. & Regenberg, Birgitte, 2022, In: Seminars in Cell and Developmental Biology. 128, p. 40-50 11 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
ATP signaling in pancreatic cancer: the P2X7 receptor
Magni, Lara, Bouazzi, R., Christensen, Nynne, Tozzi, M., Poulsen, M., Johansen, J., Pless, Stephan & Novak, Ivana, 2022, In: Acta Physiologica. 236, S725, p. 661-661Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Acid Adaptation Promotes TRPC1 Plasma Membrane Localization Leading to Pancreatic Ductal Adenocarcinoma Cell Proliferation and Migration through Ca2+ Entry and Interaction with PI3K/CaM
Schnipper, J., Kouba, S., Hague, F., Girault, A., Telliez, M., Guenin, S., Ahidouch, A., Pedersen, Stine Helene Falsig & Ouadid-Ahidouch, H., 2022, In: Cancers. 14, 19, 27 p., 4946.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Activity and distribution of diazotrophic communities across the Cape Verde Frontal Zone in the Northeast Atlantic Ocean
Hallstrøm, S., Benavides, M., Salamon, E. R., Arístegui, J. & Riemann, Lasse, 2022, In: Biogeochemistry. 160, 1, p. 49-67 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Adaptation and Cryptic Pseudogenization in Penguin Toll-Like Receptors
Fiddaman, S. R., Vinkler, M., Spiro, S. G., Levy, H., Emerling, C. A., Boyd, A. C., Dimopoulos, E. A., Vianna, J. A., Cole, T. L., Pan, H., Fang, M., KU, thw266, Hart, T., Frantz, L. A. F. & Smith, A. L., 2022, In: Molecular Biology and Evolution. 39, 1, 17 p., msab354.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Adult moulting and dimorphism in a new species of Sphenoderes (Kinorhyncha Kentrorhagata): Is the exception becoming the rule?
Sørensen, Martin Vinther & Herranz, Maria, 2022, In: Acta Zoologica. 103, 2, p. 150-166 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
African climate and geomorphology drive evolution and ghost introgression in sable antelope
Rocha, J. L., Vaz Pinto, P., Siegismund, Hans Redlef, Meyer, M., Jansen van Vuuren, B., Veríssimo, L., Ferrand, N. & Godinho, R., 2022, In: Molecular Ecology. 31, 10, p. 2968-2984 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Age, empathy, familiarity, domestication and call features enhance human perception of animal emotion expressions
Greenall, J. S., Cornu, L., Maigrot, A. L., de la Torre, Mónica Padilla & Briefer, Elodie, 2022, In: Royal Society Open Science. 9, 12, 16 p., 221138.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ameliorating effects of lifelong physical activity on healthy aging and mitochondrial function in human white adipose tissue
Gudiksen, Anders, Qoqaj, A., Jørgensen, Stine Ringholm, Wojtaszewski, Jørgen F P, Plomgaard, Peter Stendahl & Pilegaard, Henriette, 2022, In: Journals of Gerontology. Series A: Biological Sciences & Medical Sciences. 77, 6, p. 1101-1111 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ameliorative Effects of Trichoderma harzianum and Rhizosphere Soil Microbes on Cadmium Biosorption of Barley (Hordeum vulgare L.) in Cd-Polluted Soil
Taghavi Ghasemkheili, F., Ekelund, Flemming, Johansen, Jesper Liengaard, Pirdashti, H., Ghadirnezhad Shiade, S. R., Fathi, A. & Kjøller, Rasmus, 2022, In: Journal of Soil Science and Plant Nutrition. 22, 1, p. 527-539 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An LDLR missense variant poses high risk of familial hypercholesterolemia in 30% of Greenlanders and offers potential of early cardiovascular disease intervention
Jørsboe, E., Andersen, M. K., Skotte, L., Stæger, F. F., Færgeman, N. J., Hanghøj, K., Santander, C. G., Senftleber, N. K., Diaz, L. J., Overvad, M., Waples, R. K., Geller, F., Bjerregaard, P., Melbye, M., Larsen, C. V. L., Feenstra, B., Anders Koch, K., Jørgensen, M. E., Grarup, N., Moltke, I. & 2 others, , 2022, In: Human Genetics and Genomics Advances. 3, 4, 10 p., 100118.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An adipose lncRAP2-Igf2bp2 complex enhances adipogenesis and energy expenditure by stabilizing target mRNAs
Alvarez-Dominguez, J. R., Winther, Sally, Hansen, Jacob B., Lodish, H. F. & Knoll, M., 2022, In: iScience. 25, 1, 25 p., 103680.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An easily modifiable conjugative plasmid for studying horizontal gene transfer
Wang, Q., Olesen, Asmus Kalckar, Maccario, Lorrie & Madsen, Jonas Stenløkke, 2022, In: Plasmid. 123-124, 10 p., 102649.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An update on principles of m6A targeting
Bai, B., 2022, In: Trends in Plant Science. 27, 3, p. 224-226 3 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Analysis of the fecal and oral microbiota in chronic recurrent multifocal osteomyelitis
Rausch, P., Hartmann, M., Baines, J. F. & von Bismarck, P., 2022, In: Arthritis Research and Therapy. 24, 16 p., 54.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient and historical DNA in conservation policy
Jensen, E. L., Díez-del-Molino, D., Gilbert, M Thomas P, Bertola, Laura, Borges, F., Cubric-Curik, V., de Navascués, M., Frandsen, P., Heuertz, M., Hvilsom, C., Jiménez-Mena, B., Miettinen, A., Moest, M., Chrzanová Pecnerová, Patrícia, Barnes, I. & Vernesi, C., 2022, In: Trends in Ecology and Evolution. 37, 5, p. 420-429 10 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Ancient proteins resolve controversy over the identity of Genyornis eggshell
Demarchi, B., Stiller, Josefin, Grealy, A., Mackie, Meaghan, Deng, Y., Gilbert, M Thomas P, Clarke, J., Legendre, L. J., Boano, R., Sicheritz-Pontén, Thomas, Magee, J., KU, thw266, Bunce, M., Collins, Matthew James & Miller, G., 2022, In: PNAS. 119, 43, 9 p., e2109326119.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Angiomotin isoform 2 promotes binding of PALS1 to KIF13B at primary cilia and regulates ciliary length and signaling
Morthorst, Stine Kjær, Nielsen, C., Farinelli, P., Anvarian, Zeinab, Rasmussen, C. B. R., Serra-Marques, A., Grigoriev, I., Altelaar, M., Fürstenberg, N., Ludwig, A., Akhmanova, A., Christensen, Søren Tvorup & Pedersen, Lotte Bang, 2022, In: Journal of Cell Science. 135, 12, 10 p., jcs259471.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Anthropogenically impacted lake catchments in Denmark reveal low microplastic pollution
Kallenbach, E. M. F., Friberg, N., Lusher, A., Jacobsen, Dean & Hurley, R. R., 2022, In: Environmental Science and Pollution Research. 29, 31, p. 47726-47739 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Appraisal of a novel fishery of whelks (Buccinum undatum) in Danish waters
Vismann, Bent, Nielsen, J. W. & Ronfeldt, J. L., 2022, In: Regional Studies in Marine Science. 56, 11 p., 102710.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Arbuscular mycorrhizal fungal communities of pristine rainforests and adjacent sugarcane fields recruit from different species pools
Pereira, C. M. R., López-García, Á., Maia, L. C., Frøslev, Tobias Guldberg, Kjøller, Rasmus & Rosendahl, Søren, 2022, In: Soil Biology and Biochemistry. 167, 9 p., 108585.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Arctic freshwater biodiversity: Establishing baselines, trends, and drivers of ecological change
Culp, J. M., Goedkoop, W., Christensen, T., Christoffersen, Kirsten Seestern, Fefilova, E., Liljaniemi, P., Novichkova, A. A., Ólafsson, J. S., Sandøy, S., Zimmerman, C. E. & Lento, J., 2022, In: Freshwater Biology. 67, 1, p. 1-13 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Arctic soil respiration and microbial community structure driven by silicon and calcium
Stimmler, P., Priemé, Anders, Elberling, Bo, Goeckede, M. & Schaller, J., 2022, In: Science of the Total Environment. 838, 2, 10 p., 156152.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Artificial selection of stable rhizosphere microbiota leads to heritable plant phenotype changes
Jacquiod, S., Spor, A., Wei, S., Munkager, V., Bru, D., Sørensen, Søren Johannes, Salon, C., Philippot, L. & Blouin, M., 2022, In: Ecology Letters. 25, 1, p. 189-201 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Asthma and Wheeze Severity and the Oropharyngeal Microbiota in Children and Adolescents
Thorsen, J., Stokholm, J., Rasmussen, M. A., Roggenbuck-Wedemeyer, M., Vissing, N. H., Mortensen, M. S., Brejnrod, A. D., Fleming, L., Bush, A., Roberts, G., Singer, F., Frey, U., Hedlin, G., Nordlund, B., Murray, C. S., Abdel-Aziz, M. I., Hashimoto, S., van Aalderen, W., Maitland-van der Zee, A. H., Shaw, D. & 13 others, , 2022, In: Annals of the American Thoracic Society. 19, 12, p. 2031-2043 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Avian gut microbiomes taking flight
Bodawatta, Kasun Harshana, Hird, S. M., Grond, K., Poulsen, Michael & Jønsson, Knud Andreas, 2022, In: Trends in Microbiology. 30, 3, p. 268-280 13 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Barley Rhizosphere Microbiome Transplantation: A Strategy to Decrease Susceptibility of Barley Grown in Soils With Low Microbial Diversity to Powdery Mildew
Bziuk, N., Maccario, Lorrie, Sørensen, Søren Johannes, Schikora, A. & Smalla, K., 2022, In: Frontiers in Microbiology. 13, 14 p., 830905.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Benchmarking freely available HLA typing algorithms across varying genes, coverages and typing resolutions
Thuesen, N. H., Klausen, M. S., Gopalakrishnan, Shyam, Trolle, T. & Renaud, Gabriel, 2022, In: Frontiers in Immunology. 13, 15 p., 987655.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Beta2-agonist increases skeletal muscle interleukin 6 production and release in response to resistance exercise in men
Hostrup, Morten, Knudsen, Jakob Grunnet, Maag Kristensen, C., Jessen, Søren Kaare, Pilegaard, Henriette & Bangsbo, Jens, 2022, In: Scandinavian Journal of Medicine & Science in Sports. 32, 7, p. 1099-1108 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bidirectional Exchange of Biogenic Volatile Organic Compounds in Subarctic Heath Mesocosms During Autumn Climate Scenarios
Baggesen, N. S., Davie-Martin, Cleo Lisa, Seco, Roger, Holst, T. & Rinnan, Riikka, 2022, In: Journal of Geophysical Research: Biogeosciences. 127, 6, 20 p., e2021JG006688.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bidirectional protein–protein interactions control liquid–liquid phase separation of PSD-95 and its interaction partners
Christensen, N. R., Pedersen, Christian Parsbæk, Sereikaité, Vita, Pedersen, J. N., Vistrup-Parry, M., Sørensen, Andreas Toft, Otzen, D., Teilum, Kaare, Madsen, Kenneth Lindegaard & Strømgaard, Kristian, 2022, In: iScience. 25, 2, 26 p., 103808.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Biochar application differentially affects soil micro-, meso-macro-fauna and plant productivity within a nature restoration grassland
Jeffery, S., van de Voorde, T. F. J., Harris, W. E., Mommer, L., Van Groenigen, J. W., De Deyn, G. B., Ekelund, Flemming, Briones, M. J. I. & Bezemer, T. M., 2022, In: Soil Biology and Biochemistry. 174, 11 p., 108789.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Biodiversity patterns of Arctic diatom assemblages in lakes and streams: Current reference conditions and historical context for biomonitoring
Kahlert, M., Rühland, K. M., Lavoie, I., Keck, F., Saulnier-Talbot, E., Bogan, D., Brua, R. B., Campeau, S., Christoffersen, Kirsten Seestern, Culp, J. M., Karjalainen, S. M., Lento, J., Schneider, S. C., Shaftel, R. & Smol, J. P., 2022, In: Freshwater Biology. 67, 1, p. 116-140 25 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Biofilm cultivation facilitates coexistence and adaptive evolution in an industrial bacterial community
Henriksen, N. N. S. E., Hansen, Mads Frederik, Kiesewalter, Heiko T., Russel, J., Nesme, Joseph, Foster, K. R., Svensson, B., Øregaard, G., Herschend, J. & Burmølle, Mette, 2022, In: npj Biofilms and Microbiomes. 8, 8 p., 59.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bioinformatics of transcription factor binding prediction
Navarro-Delgado, E. I., Salgado-Albarrán, M., Torres-Arciga, K., Alcaraz, N., Soto-Reyes, E., Herrera, L. A. & González-Barrios, R., 2022, Bioinformatics and Human Genomics Research. CRC Press, p. 203-221 19 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Biophysical properties at patch scale shape the metabolism of biofilm landscapes
Depetris, A., Tagliavini, G., Peter, H., Kühl, Michael, Holzner, M. & Battin, T. J., 2022, In: npj Biofilms and Microbiomes. 8, 12 p., 5.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Biosolids for safe land application: does wastewater treatment plant size matters when considering antibiotics, pollutants, microbiome, mobile genetic elements and associated resistance genes?
Wolters, B., Hauschild, K., Blau, K., Mulder, I., Heyde, B. J., Sørensen, Søren Johannes, Siemens, J., Jechalke, S., Smalla, K. & Nesme, Joseph, 2022, In: Environmental Microbiology. 24, 3, p. 1573-1589 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Biosynthesis of Guanitoxin Enables Global Environmental Detection in Freshwater Cyanobacteria
Lima, S. T., Fallon, T. R., Cordoza, J. L., Chekan, J. R., Delbaje, E., Hopiavuori, A. R., Alvarenga, Danillo Oliveira, Wood, S. M., Luhavaya, H., Baumgartner, J. T., Dörr, F. A., Etchegaray, A., Pinto, E., McKinnie, S. M. K., Fiore, M. F. & Moore, B. S., 2022, In: Journal of the American Chemical Society. 144, 21, p. 9372-9379Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Biotic and abiotic controls of nitrogen fixation in cyanobacteria-moss associations
Rousk, Kathrin, 2022, In: New Phytologist. 235, 4, p. 1330-1335 6 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Bland James Finlay (March 16, 1952-December 24, 2021)
Fenchel, Tom, 2022, In: Protist. 173, 5, 4 p., 125906.Research output: Contribution to journal › Comment/debate › Research
- Published
Bryophyte species differ widely in their growth and N2-fixation responses to temperature
Rzepczynska, A. M., Michelsen, Anders, Olsen, M. A. N. & Lett, Signe, 2022, In: Arctic Science. 8, 4, 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CO2 i Skandinaviens vandløb analyseret med maskinlæring
Martinsen, K. T. & Sand-Jensen, Kaj, 2022, In: Vand & Jord. 5, p. 207-210Research output: Contribution to journal › Journal article › Communication
- Published
CRISPR-Cas systems are widespread accessory elements across bacterial and archaeal plasmids
Pinilla Redondo, Rafael, Russel, J., Mayo-Muñoz, D., Shah, S. A., Garrett, Roger Antony, Nesme, Joseph, Madsen, Jonas Stenløkke, Fineran, P. C. & Sørensen, Søren Johannes, 2022, In: Nucleic Acids Research. 50, 8, p. 4315-4328Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CRISPR-Cas12a targeting of ssDNA plays no detectable role in immunity
Marino, N. D., Pinilla Redondo, Rafael & Bondy-Denomy, J., 2022, In: Nucleic acids symposium series. 50, 11, p. 6414-6422 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CRISPR/Cas9 gRNA activity depends on free energy changes and on the target PAM context
Corsi, G. I., Qu, Kunli, Alkan, F., Pan, Xiaoguang, Luo, Y. & Gorodkin, Jan, 2022, In: Nature Communications. 13, 14 p., 3006.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CReSIL: accurate identification of extrachromosomal circular DNA from long-read sequences
Wanchai, V., Jenjaroenpun, P., Leangapichart, T., Arrey Tané, Gerard, Burnham, C. M., Tümmler, M. C., Delgado-Calle, J., Regenberg, Birgitte & Nookaew, I., 2022, In: Briefings in Bioinformatics. 23, 6, 11 p., bbac422.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Calibrated uncertainty for molecular property prediction using ensembles of message passing neural networks
Busk, J., Jørgensen, P. B., Bhowmik, A., Schmidt, M. N., Winther, Ole & Vegge, T., 2022, In: Machine Learning: Science and Technology. 3, 1, 12 p., 015012.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Can bryophyte groups increase functional resolution in tundra ecosystems?
Lett, S., Jónsdóttir, I. S., Becker-Scarpitta, A., Christiansen, C. T., During, H., Ekelund, F., Henry, G. H. R., Lang, S. I., Michelsen, A., Rousk, K., Alatalo, J. M., Betway, K. R., Rui, S. B., Callaghan, T., Carbognani, M., Cooper, E. J., Cornelissen, J. H. C., Dorrepaal, E., Egelkraut, D., Elumeeva, T. G. & 20 others, , 2022, In: Arctic Science. 8, 3, 29 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Can multi-species biofilms defeat antimicrobial surfaces on medical devices?
Ramstedt, M. & Burmølle, Mette, 2022, In: Current Opinion in Biomedical Engineering. 22, 8 p., 100370.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Canalized gene expression during development mediates caste differentiation in ants
Qiu, Bitao, Dai, X., Li, P., Larsen, Rasmus Stenbak, Li, Ruyan, Price, A. L., Ding, G., Texada, Michael James, Zhang, X., Zuo, D., Gao, Q., Jiang, W., Wen, T., Pontieri, L., Guo, C., Rewitz, Kim, Li, Q., Liu, W., Boomsma, Jacobus J. & KU, thw266, 2022, In: Nature Ecology and Evolution. 6, 11, p. 1753-1765Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Candidemia among Hospitalized Pediatric Patients Caused by Several Clonal Lineages of Candida parapsilosis
Hare, R. K., Arastehfar, A., Rosendahl, Søren, Charsizadeh, A., Daneshnia, F., Eshaghi, H., Mirhendi, H., Boekhout, T., Hagen, F. & Arendrup, Maiken Cavling, 2022, In: Journal of Fungi. 8, 2, 11 p., 183.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cardiovascular Autonomic Neuropathy in Type 1 Diabetes Is Associated With Disturbances in TCA, Lipid, and Glucose Metabolism
Hansen, C. S., Suvitaival, T., Theilade, Karen Simone, Mattila, I., Lajer, M., Trošt, K., Ahonen, L., Hansen, T. W., Legido-Quigley, C., Rossing, Peter & Ahluwalia, Tarun Veer Singh, 2022, In: Frontiers in Endocrinology. 13, 831793.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Casein and red meat proteins differentially affect the composition of the gut microbiota in weaning rats
Zhao, Fan, Wang, Chong, Song, S., Fang, C., Zhou, G., Li, C. & Kristiansen, Karsten, 2022, In: Food Chemistry. 397, 11 p., 133769.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cell fine structure and phylogeny of Parvodinium: towards an ultrastructural characterization of the Peridiniopsidaceae (Dinophyceae)
Pandeirada, M. S., Craveiro, S. C., Daugbjerg, Niels, Moestrup, Øjvind & Calado, A. J., 2022, In: European Journal of Phycology. 58, 2, 21 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cell size matters: Nano- and micro-plastics preferentially drive declines of large marine phytoplankton due to co-aggregation
Dedman, C. J., Christie-Oleza, J. A., Fernandez Juarez, Victor & Echeveste, P., 2022, In: Journal of Hazardous Materials. 424, Part B, 13 p., 127488.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cell transcriptomic atlas of the non-human primate Macaca fascicularis
Han, L., Wei, X., Liu, C., Volpe, G., Zhuang, Z., Zou, X., Wang, Z., Pan, T., Yuan, Y., Zhang, X., Fan, P., Guo, P., Lai, Y., Lei, Y., Liu, X., Yu, F., Shangguan, S., Lai, G., Deng, Q., Liu, Y. & 57 others, , 2022, In: Nature. 604, p. 723-731Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Changes in the foliar fungal community between oak leaf flushes along a latitudinal gradient in Europe
Gaytán, Á., Abdelfattah, A., Faticov, M., Moreira, X., Castagneyrol, B., Van Halder, I., De Frenne, P., Meeussen, C., Timmermans, B. G. H., Ten Hoopen, J. P. J. G., Rasmussen, P. U., Bos, N., Jaatinen, R., Pulkkinen, P., Söderlund, S., Gotthard, K., Pawlowski, K. & Tack, A. J. M., 2022, In: Journal of Biogeography. 49, 12, 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of Divalent Cation Interactions with AASTY Nanodiscs
Timcenko, Milena, Autzen, A. A. A. & Autzen, Henriette Elisabeth, 2022, In: ACS Applied Polymer Materials. 4, 2, p. 1071-1083Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of erenumab and rimegepant on calcitonin gene-related peptide induced responses in Xenopus Laevis oocytes expressing the calcitonin gene-related peptide receptor and the amylin-1 receptor
La Cour, S. H., Juhler, K., Kogelman, L. J. A., Olesen, Jes, Klærke, Dan Arne, Kristensen, D. M. & Jansen-Olesen, I., 2022, In: Journal of Headache and Pain. 23, 12 p., 59.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chemotaxis may assist marine heterotrophic bacterial diazotrophs to find microzones suitable for N2 fixation in the pelagic ocean
Hallstrøm, S., Raina, J., Ostrowski, M., Parks, D. H., Tyson, G. W., Hugenholtz, P., Stocker, R., Seymour, J. R. & Riemann, Lasse, 2022, In: ISME Journal. 16, 11, p. 2525-2534 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chord: an ensemble machine learning algorithm to identify doublets in single-cell RNA sequencing data
Xiong, K., Zhou, H., Lin, C., Yin, J., Kristiansen, Karsten, Yang, H. & Li, G., 2022, In: Communications Biology . 5, 11 p., 510.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chromatin modifier HUSH co-operates with RNA decay factor NEXT to restrict transposable element expression
Garland, W., Müller, I., Wu, M., Schmid, M., Imamura, K., Rib, Leonor, Sandelin, Albin Gustav, Helin, K. & Jensen, T. H., 2022, In: Molecular Cell. 82, 9, p. 1691-1707.e8Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chromosome evolution and the genetic basis of agronomically important traits in greater yam
Bredeson, J. V., Lyons, J. B., Oniyinde, I. O., Okereke, N. R., Kolade, O., Nnabue, I., Nwadili, C. O., Hřibová, E., Parker, M., Nwogha, J., Shu, S., Carlson, J., Kariba, R., Muthemba, S., Knop, K., Barton, G. J., Sherwood, A. V., Lopez-Montes, A., Asiedu, R., Jamnadass, R. & 13 others, , 2022, In: Nature Communications. 13, 16 p., 2001.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chromosome-scale assembly and whole-genome sequencing of 266 giant panda roundworms provide insights into their evolution, adaptation and potential drug targets
Han, L., Lan, T., Li, D., Li, H., Deng, L., Peng, Z., He, S., Zhou, Y., Han, R., Li, L., Lu, Y., Lu, H., Wang, Q., Yang, S., Zhu, Y., Huang, Y., Cheng, X., Yu, J., Wang, Y., Sun, H. & 8 others, , 2022, In: Molecular Ecology Resources. 22, 2, p. 768-785 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chromosome-scale haplotype-resolved pangenomics
Garg, S., Balboa, Renzo Fidel Ferdinando & Kuja, J., 2022, In: Trends in Genetics. 38, 11, p. 1103-1107 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ciliary flows in corals ventilate target areas of high photosynthetic oxygen production
Pacherres, Cesar, Ahmerkamp, S., Koren, K., Richter, C. & Holtappels, M., 2022, In: Current Biology. 32, 19, p. 4150-4158.e3 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Circle-Seq reveals genomic and disease-specific hallmarks in urinary cell-free extrachromosomal circular DNAs
Lv, W., Pan, X., Han, P., Wang, Z., Feng, W., Xing, X., Wang, Q., Qu, K., Zeng, Y., Zhang, C., Xu, Z., Li, Y., Zheng, T., Lin, L., Liu, C., Liu, X., Li, H., Henriksen, R. A., Bolund, L., Lin, L. & 7 others, , 2022, In: Clinical and Translational Medicine. 12, 4, 16 p., e817.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Circular DNA in the human germline and its association with recombination
Henriksen, Rasmus Henrik Amund, Jenjaroenpun, P., Sjøstrøm, I. B., Jensen, Kristian HR, Prada Luengo, Inigo, Wongsurawat, T., Nookaew, I. & Regenberg, Birgitte, 2022, In: Molecular Cell. 82, 1, p. 209-217.e7Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Circumpolar patterns of Arctic freshwater fish biodiversity: A baseline for monitoring
Laske, S. M., Amundsen, P., Christoffersen, Kirsten Seestern, Erkinaro, J., Guðbergsson, G., Hayden, B., Heino, J., Holmgren, K., Kahilainen, K. K., Lento, J., Orell, P., Östergren, J., Power, M., Rafikov, R., Romakkaniemi, A., Svenning, M., Swanson, H., Whitman, M. & Zimmerman, C. E., 2022, In: Freshwater Biology. 67, 1, p. 176-193 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Classification of pig calls produced from birth to slaughter according to their emotional valence and context of production: [Inkl. correction]
Briefer, Elodie, Sypherd, C. C., Linhart, P., Leliveld, L. M. C., de la Torre, M. P., Read, E. R., Guérin, C., Deiss, V., Monestier, C., Rasmussen, J. H., Špinka, M., Düpjan, S., Boissy, A., Janczak, A. M., Hillmann, E. & Tallet, C., 2022, In: Scientific Reports. 12, 10 p., 3409.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Clinical application of high-throughput sequencing technology in prenatal screening and diagnosis of birth defects
ZENG, F., 2022, Department of Biology, Faculty of Science, University of Copenhagen. 118 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Co-evolution of drug resistance and broadened substrate recognition in HIV protease variants isolated from an Escherichia coli genetic selection system
Koivisto, J. M., Poulsen, N. R., Larsen, B. S., Weibull, M. G. M., Stein, Amelie, Doro, F., Winther, Jakob R., Lindorff-Larsen, Kresten & Willemoës, Martin, 2022, In: The Biochemical journal. 479, 4, p. 479-501Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Combined berberine and probiotic treatment as an effective regimen for improving postprandial hyperlipidemia in type 2 diabetes patients: a double blinded placebo controlled randomized study
Wang, S., Ren, H., Zhong, H., Zhao, X., Li, C., Ma, J., Gu, X., Xue, Y., Huang, S., Yang, J., Chen, L., Chen, G., Qu, S., Liang, J., Qin, L., Huang, Q., Peng, Y., Li, Q., Wang, X., Zou, Y. & 10 others, , 2022, In: Gut Microbes. 14, 1, 18 p., 2003176.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Combining reverse osmosis and microbial degradation for remediation of drinking water contaminated with recalcitrant pesticide residue
Schostag, M. D., Gobbi, Alex, Fini, M. N., Ellegaard-Jensen, L., Aamand, J., Hansen, Lars Hestbjerg, Muff, J. & Albers, C. N., 2022, In: Water Research. 216, 12 p., 118352.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative Analyses of 3,654 Plastid Genomes Unravel Insights Into Evolutionary Dynamics and Phylogenetic Discordance of Green Plants
Yang, T., Sahu, S. K., Yang, L., Liu, Y., Mu, W., Liu, X., Strube, M. L., Liu, Huan & Zhong, B., 2022, In: Frontiers in Plant Science. 13, 13 p., 808156.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative Genomic and Metabolomic Analysis of Termitomyces Species Provides Insights into the Terpenome of the Fungal Cultivar and the Characteristic Odor of the Fungus Garden of Macrotermes natalensis Termites
Kreuzenbeck, N. B., Seibel, E., Schwitalla, J. W., Fricke, J., Conlon, B. H., Schmidt, Suzanne, Hammerbacher, A., Köllner, T. G., Poulsen, Michael, Hoffmeister, D., Beemelmanns, C. & Pupo, M. T. (ed.), 2022, In: mSystems. 7, 1, 16 p., e01214-21.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative phylogeography study reveals introgression and incomplete lineage sorting during rapid diversification of Rhodiola
You, J., Lougheed, S. C., Zhao, Y., KU, thw266, Liu, W., Lu, F., Wang, Y., Zhang, W., Yang, J., Qiong, L. & Song, Z., 2022, In: Annals of Botany. 129, 2, p. 185-200 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative proteomics and secretomics revealed virulence, and coresistance-related factors in non O1/O139 Vibrio cholerae recovered from 16 species of consumable aquatic animals
Shan, X., Fu, J., Li, X., Peng, Xu & Chen, L., 2022, In: Journal of Proteomics. 251, 15 p., 104408.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Computational identification of signals predictive for nuclear RNA exosome degradation pathway targeting
Wu, M., Schmid, M., Jensen, T. H. & Sandelin, Albin Gustav, 2022, In: NAR Genomics and Bioinformatics. 4, 3, 18 p., lqac071.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conflicts between large carnivores and local pastoralists around Niokolo Koba National Park, Senegal
Gueye, M., Van Cauteren, D., Mengual, L., Pellaton, R., Leirs, H., Bertola, Laura & de Iongh, H., 2022, In: European Journal of Wildlife Research. 68, 1, 11 p., 9.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conformational ensembles of intrinsically disordered proteins and flexible multidomain proteins
Thomasen, Emil & Lindorff-Larsen, Kresten, 2022, In: Biochemical Society Transactions. 50, 1, p. 541-554 14 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Conformational heterogeneity of UCAAUC RNA oligonucleotide from molecular dynamics simulations, SAXS, and NMR experiments
Bergonzo, C., Grishaev, A. & Bottaro, S., 2022, In: RNA. 28, 7, p. 937-946 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Confusion will be my epitaph: Genome-scale discordance stifles phylogenetic resolution of Holothuroidea
Koch, N. M., Tilic, E., Miller, A. K., Stiller, Josefin & Rouse, G. W., 2022, bioRxiv, 42 p.Research output: Working paper › Preprint › Research
- Published
Conservation genomics of the endangered Seychelles Magpie-Robin (Copsychus sechellarum): a unique insight into the history of a precious endemic bird
Cavill, Emily Louisa, Gopalakrishnan, Shyam, Puetz, Lara Christine, Ribeiro, Â. M., Mak, Sarah Siu Tze, Rodrigues da Fonseca, Rute Andreia, Antunes Pacheco, George, Dunlop, B., Accouche, W., Shah, N., Zora, A., Calabrese, L., Genner, M., Jones, G., Guo, C., KU, thw266 & Gilbert, M Thomas P, 2022, In: Ibis. 164, 2, p. 396-410 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conserved conformational dynamics determine enzyme activity
Torgeson, K. R., Clarkson, M. W., Granata, D., Lindorff-Larsen, Kresten, Page, R. & Peti, W., 2022, In: Science Advances. 8, 31, 10 p., eabo5546.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conserved degronome features governing quality control associated proteolysis
Mashahreh, B., Armony, S., Johansson, Kristoffer Enøe, Chappleboim, A., Friedman, N., Gardner, R. G., Hartmann-Petersen, Rasmus, Lindorff-Larsen, Kresten & Ravid, T., 2022, In: Nature Communications. 13, 1, 13 p., 7588.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conserved signalling components coordinate epidermal patterning and cuticle deposition in barley
Liu, L., Jose, S. B., Campoli, C., Bayer, M. M., Sánchez-Diaz, M. A., McAllister, T., Zhou, Y., Eskan, M., Milne, L., Schreiber, M., Batstone, T., Bull, I. D., Ramsay, L., von Wettstein, Penny, Waugh, R., Hetherington, A. M. & McKim, S. M., 2022, In: Nature Communications. 13, 18 p., 6050.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Context dependency of nucleotide probabilities and variants in human DNA
Liang, Yuhu, Grønbæk, Christian, Fariselli, P. & Krogh, Anders, 2022, In: BMC Genomics. 23, 1, 15 p., 87.Research output: Contribution to journal › Journal article › Research › peer-review
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Genetic diversity within lichen photobionts of the Lecanora varia group (Lichenes, Ascomycota)
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Long-term survival of dinoflagellate cysts in anoxic marine sediments.
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Danmarks biodiversitets fremtid: de væsentligste udfordringer og højest prioriterede virkemidler
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Recommendations for the Organisational Framework for Excellence at UCPH
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Fremme af spontan vegetation efter gran
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A region of suppressed recombination misleads neoavian phylogenomics
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