Department of Biology

 

 
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  1. Published

    An improved direct metamobilome approach increases the detection of larger-sized circular elements across kingdoms

    Alanin, K. W. S., Jørgensen, T. S., Browne, Patrick Denis, Petersen, Bent, Riber, Leise, Kot, Witold & Hansen, Lars Hestbjerg, 2021, In: Plasmid. 115, 11 p., 102576.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    An improved method for including upper size range plasmids in metamobilomes

    Norman, A., Riber, Leise, Luo, W., Li, L., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2014, In: PLoS ONE. 9, 8, 12 p., e104405.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    An in situ cryo-subfossil vegetation in North Greenland

    Alstrup, V., 1992, The Second International Lichenological Symposium IAL 2, Hemmeslöv, Båstad, Sweden. Abstracts. Lund: Dept. of System. Botany, Univ. of Lund, p. 39

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  4. Published

    An in situ instrument for planar O2 optode measurements at benthic interfaces

    Glud, R. N., Tengberg, A., Kühl, Michael, Hall, P. O. J. & Klimant, I., 2001, In: Limnology and Oceanography. 46, 8, p. 2073-2080 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    An innate immunity pathway in the moss Physcomitrella patens

    Bressendorff, Simon, Azevedo da Silva, R., Kenchappa, C. S., Ponce de León, I., Olsen, J. V., Rasmussen, M. W., Erbs, G., Newman, Mari-Anne, Petersen, Morten & Mundy, J., 2016, In: The Plant Cell. 28, 6, p. 1328-1342 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    An insulin hypersecretion phenotype precedes pancreatic β cell failure in MODY3 patient-specific cells

    Hermann, F. M., Kjærgaard, M. F., Tian, C., Tiemann, Ulf, Jackson, Abigail Laura, Olsen, L. R., Kraft, M., Carlsson, P. O., Elfving, I. M., Kettunen, J. L. T., Tuomi, T., Novak, Ivana & Semb, Tor Henrik, 2023, In: Cell Stem Cell. 30, 1, p. 38-51.e8 23 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    An integrated catalog of reference genes in the human gut microbiome

    Li, J., Jia, H., Cai, X., Zhong, H., Feng, Q., Sunagawa, S., Arumugam, M., Kultima, J. R., Prifti, E., Nielsen, T., Juncker, A., Manichanh, C., Chen, B., Zhang, W., Levenez, F., Wang, J., Xu, X., Xiao, L., Liang, S., Zhang, D. & 17 others, Zhang, Z., Chen, W., Zhao, H., Al-Aama, J. Y., Edris, S., Yang, H., Wang, J., Hansen, Torben, Nielsen, H. B., Brunak, S., Kristiansen, Karsten, Guarner, F., Pedersen, Oluf Borbye, Doré, J., Ehrlich, S. D., Bork, P. & Wang, J., 2014, In: Nature Biotechnology. 32, 8, p. 834-845 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    An integrated chromatin accessibility and transcriptome landscape of human pre-implantation embryos

    Liu, L., Leng, L., Liu, C., Lu, C., Yuan, Y., Wu, L., Gong, F., Zhang, S., Wei, X., Wang, M., Zhao, L., Hu, L., Wang, J., Yang, H., Zhu, S., Chen, F., Lu, G., Shang, Z. & Li, G., 2019, In: Nature Communications. 10, p. 1-11 364.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    An integrated chromosome-scale genome assembly of the Masai giraffe (Giraffa camelopardalis tippelskirchi)

    Farré, M., Li, Q., Darolti, I., Zhou, Y., Damas, J., Proskuryakova, A. A., Kulemzina, A. I., Chemnick, L. G., Kim, J., Ryder, O. A., Ma, J., Graphodatsky, A. S., Zhang, G., Larkin, D. M. & Lewin, H. A., 2019, In: GigaScience. 8, 8, 9 p., giz090.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    An integrated epigenomic analysis for type 2 diabetes susceptibility loci in monozygotic twins

    Yuan, W., Xia, Y., Bell, C. G., Yet, I., Ferreira, T., Ward, K. J., Gao, F., Loomis, A. K., Hyde, C. L., Wu, H., Lu, H., Liu, Y., Small, K. S., Vinuela, A., Morris, A. P., Berdasco, M., Esteller, M., Brosnan, M. J., Deloukas, P., McCarthy, M. I. & 4 others, John, S. L., Bell, J. T., Wang, J. & Spector, T. D., 2014, In: Nature Communications. 5, 7 p., 5719.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    An integrated expression atlas of miRNAs and their promoters in human and mouse

    de Rie, D., Abugessaisa, I., Alam, T., Arner, E., Arner, P., Ashoor, H., Åström, G., Babina, M., Bertin, N., Burroughs, A. M., Carlisle, A. J., Daub, C. O., Detmar, M., Deviatiiarov, R., Fort, A., Gebhard, C., Goldowitz, D., Guhl, S., Ha, T. J., Harshbarger, J. & 31 others, Hasegawa, A., Hashimoto, K., Herlyn, M., Heutink, P., Hitchens, K. J., Hon, C. C., Huang, E., Ishizu, Y., Kai, C., Kasukawa, T., Klinken, P., Lassmann, T., Lecellier, C., Lee, W., Lizio, M., Makeev, V., Mathelier, A., Medvedeva, Y. A., Mejhert, N., Mungall, C. J., Noma, S., Ohshima, M., Okada-Hatakeyama, M., Persson, H., Rizzu, P., Roudnicky, F., Sætrom, P., Sato, H., Vitting-Seerup, K., Sandelin, Albin Gustav & FANTOM Consortium, F. C., 21 Aug 2017, In: Nature Biotechnology. 35, 9, p. 872-878 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    An integrated gene catalog and over 10,000 metagenome-assembled genomes from the gastrointestinal microbiome of ruminants

    Xie, F., Jin, W., Si, H., Yuan, Y., Tao, Y., Liu, J., Wang, X., Yang, C., Li, Q., Yan, X., Lin, L., Jiang, Q., Zhang, L., Guo, C., Greening, C., Heller, R., Guan, L. L., Pope, P. B., Tan, Z., Zhu, W. & 4 others, Wang, M., Qiu, Q., Li, Z. & Mao, S., 2021, In: Microbiome. 9, 20 p., 137.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    An integrated map of genetic variation from 1.092 human genomes

    Abecasis, G. R., Auton, A., Brooks, L. D., DePristo, M. A., Durbin, R. M., Handsaker, R. E., Kang, H. M., Marth, G. T., McVean, G. A., Wang, J. & The 1000 Genomes Project Consortium, T. 1. G. P. C., 2012, In: Nature. 491, p. 56-65 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    An integrated tool to study MHC region: accurate SNV detection and HLA genes typing in human MHC region using targeted high-throughput sequencing

    Cao, H., Wu, J., Wang, Y., Jiang, H., Zhang, T., Liu, X., Xu, Y., Liang, D., Gao, P., Sun, Y., Gifford, B., D'Ascenzo, M., Liu, X., Tellier, L. C. A. M., Yang, F., Tong, X., Chen, D., Zheng, J., Li, W., Richmond, T. & 3 others, Xu, X., Wang, J. & Li, Y., 2013, In: P L o S One. 8, 7, 9 p., e69388.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    An interactive environment for agile analysis and visualization of ChIP-sequencing data

    Lerdrup, Mads, Johansen, Jens Vilstrup, Agrawal-Singh, S. & Hansen, K., Apr 2016, In: Nature Structural and Molecular Biology. 23, 4, p. 349-57 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    An intermediate-conductance Ca2+-activated K+ channel is important for secretion in pancreatic duct cells

    Hayashi, M., Wang, J., Hede, S. E. & Novak, Ivana, 2012, In: American Journal of Physiology: Cell Physiology. 303, 2, p. C151-C159 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    An intriguing relationship between the cyclic diguanylate signaling system and horizontal gene transfer

    Madsen, Jonas Stenløkke, Hylling, Ole, Jacquiod, S. J. A., Pécastaings, S., Hansen, L. H., Riber, Leise, Vestergaard, G. A. & Sørensen, Søren Johannes, 2018, In: ISME Journal. 12, 9, p. 2330-2334 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    An introduction to deep learning on biological sequence data: examples and solutions

    Jurtz, V. I., Johansen, A. R., Nielsen, M., Almagro Armenteros, J. J., Nielsen, H., Sønderby, C. K., Winther, Ole & Sønderby, S. K., 15 Nov 2017, In: Bioinformatics. 33, 22, p. 3685-3690 6 p.

    Research output: Contribution to journal › Review › Research › peer-review

  19. Published

    An introduction to methods for analyzing thiols and disulfides: Reactions, reagents, and practical considerations

    Hansen, R. E. & Winther, Jakob R., 2009, In: Analytical Biochemistry. 394, 2, p. 147-58 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    An invertebrate model for CNS drug discovery: transcriptomic and functional analysis of a mammalian P-glycoprotein ortholog

    Al-Qadi, S., Schiøtt, M., Hansen, S. H., Nielsen, P. A. & Badolo, L., 2015, In: B B A - General Subjects. 1850, 12, p. 2439-2451 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    An investigation of the statistical power of neutrality tests based on comparative and population genetic data

    Zhai, W., Nielsen, Rasmus & Slatkin, M., 2009, In: Molecular Biology and Evolution. 26, 2, p. 273-83 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    An invisible workforce: biofilms in the soil

    Burmølle, Mette, Kjøller, Annelise Helene & Sørensen, Søren Johannes, 2012, Microbial biofilms: current research and applications. Lear, G. & Lewis, G. D. (eds.). Caister Academic Press, p. 61-71 11 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  23. Published

    An m6A-YTH Module Controls Developmental Timing and Morphogenesis in Arabidopsis

    Arribas Hernandez, Laura, Bressendorff, Simon, Hansen, M. H., Poulsen, C., Erdmann, S. & Brodersen, Peter, 2018, In: Plant Cell. 30, 5, p. 952-967 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    An occurrence of living Terpsinoë americana (Bailey) Ralfs in bottom sediments of the Puck Bay (the southern Baltic Sea), Poland

    Witkowski, A., 1991, In: Diatom Research. 6(2), p. 413-415

    Research output: Contribution to journal › Journal article › Research

  25. Published

    An optode sensor array for long term in situ Oxygen measurements in soil and sediment

    Rickelt, L. F., Jensen, L. A., Walpersdorf, E. C., Elberling, Bo, Glud, R. N. & Kühl, Michael, 2013, In: Journal of Environmental Quality. 42, 4, p. 1267-1273 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    An optode sensor array for long-term in situ oxygen measurements in soil and sediment [Journal of Environmental Quality, 42, (2014), 1267-1273]

    Askaer, L., Walpersdorf, E., Elberling, Bo, Glud, R. N. & Kühl, Michael, 2014, In: Journal of Environmental Quality. 43, 5, p. 1821 1 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    An outbreak of human salmonellosis in Denmark caused by alfalfa sprouts

    Wegener, H. C., Baggesen, D. L. & Nielsen, S. V., 1997.

    Research output: Contribution to conference › Conference abstract for conference › Research

  28. Published

    An overview of plasmid transfer in the plant microbiome

    Sánchez-Salazar, A. M., Taparia, Tanvi, Olesen, Asmus Kalckar, Acuña, J. J., Sørensen, Søren Johannes & Jorquera, M. A., 2023, In: Plasmid. 127, 11 p., 102695.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    An overview of the Gonyaulacales. Abstracts, 10th International Conference on Harmful Algae, October 20th25th, Florida, USA

    Lewis, J., Ellegaard, Marianne, Rochon, A., Harding, I., Daugbjerg, Niels, Fensome, R. & Taylor, M., 2002.

    Research output: Contribution to conference › Conference abstract for conference › Research

  30. Published

    An siRNA-based method for efficient silencing of gene expression in mature brown adipocytes

    Isidor, Marie Sophie, Winther, Sally, Basse, A. L., Petersen, M. C. H., Cannon, B., Nedergaard, J. & Hansen, Jacob B., 2016, In: Adipocyte. 5, 2, p. 175-185 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    An ultraconserved element probe set for velvet worms (Onychophora)

    Sato, Shoyo, Derkarabetian, S., Lord, A. & Giribet, G., 2024, In: Molecular Phylogenetics and Evolution. 197, 11 p., 108115.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    An under‑ice bloom of mixotrophic haptophytes in low nutrient and freshwater‑influenced Arctic waters

    Søgaard, D. H., Sorrell, B. K., Sejr, M. K., Andersen, P., Rysgaard, S., Hansen, Per Juel, Skyttä, A., Lemcke, S. & Lund-Hansen, L. C., 2021, In: Scientific Reports. 11, 8 p., 11:2915.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    An update of Wallace’s zoogeographic regions of the world

    Holt, B. G., Lessard, J., Borregaard, Michael Krabbe, Fritz, S., Bastos, M., Dimitrov, D. S., Fabre, P. F., Graham, C. H., Graves, G. R., Jønsson, Knud Andreas, Nogues, David Bravo, Wang, Z., Whittaker, R. J., Fjeldså, Jon & Rahbek, Carsten, 4 Jan 2013, In: Science. 339, 6115, p. 74-78 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    An update on principles of m6A targeting

    Bai, B., 2022, In: Trends in Plant Science. 27, 3, p. 224-226 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    An updated evolutionary classification of CRISPR-Cas systems

    Makarova, K. S., Wolf, Y. I., Alkhnbashi, O. S., Costa, F., Shah, S. A., Saunders, S. J., Barrangou, R., Brouns, S. J. J., Charpentier, E., Haft, D. H., Horvath, P., Moineau, S., Mojica, F. J. M., Terns, R. M., Terns, M. P., White, M. F., Yakunin, A. F., Garrett, R. A., van der Oost, J., Backofen, R. & 1 others, Koonin, E. V., 2015, In: Nature Reviews. Microbiology. 13, 11, p. 722-736 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    An upgraded comprehensive multilocus phylogeny of the Tardigrada tree of life

    Guil, N., Jørgensen, Aslak & Kristensen, Reinhardt Møbjerg, 2019, In: Zoologica Scripta. 48, 1, p. 120-137

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    An upstream activation element exerting differential transcriptional activation on an archaeal promoter

    Peng, N., Xia, Q., Chen, Z., Liang, Y. X. & She, Q., 2009, In: Molecular Microbiology. 74, 4, p. 928-939

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Anacyclus radiatus Loisel., Malcolmia graeca subsp. bicolor (Boiss. & Heldr.) Stork, Acacia cyanophylla Lindl., Lotus cytisoides L. In Greuter, W. & Raus, Th. (eds): Med - Checklist Notulae 19

    Tan, K. & Mullaj, A., 2000, In: Willdenowia. 30 (2), p. 235-238

    Research output: Contribution to journal › Journal article › Research

  39. Published

    Anaerobic Habitats: The Interaction between Eukaryotic and Prokaryotic Organisms.

    Fenchel, Tom, 1997, Progress in microbial ecology. São Paulo, Brazil: Symp. Proc., p. 141-145

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  40. Published

    Anaerobic N2 production in Arctic sea ice.

    Rysgaard, S. & Glud, R. N., 2004, In: Limnology and Oceanography. 49(1), p. 86-94

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Anaerobic bacteria in biofilm –and their tolerance to antibiotics

    Kragh, K. N., Kühl, Michael, Gregersen, A., Tvede, M., Høiby, Niels & Bjarnsholt, Thomas, 2011.

    Research output: Contribution to conference › Poster › Research

  42. Published

    Anaerobic energy production and O2 deficit-debt relationship during exhaustive exercise in humans

    Bangsbo, Jens, Gollnick, P., Graham, T., Juel, C., Kiens, Bente, Misuno, M. & Saltin, B., 1990, In: Journal of Physiology. 422, p. 539-559

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Anaerobic energy yield in soccer performance of young players

    Bangsbo, Jens, 1991, In: Science & Football. 7, p. 24-28

    Research output: Contribution to journal › Journal article › Research

  44. Published

    Anaerobic eukaryotes

    Fenchel, Tom, 2011, Anoxia: Evidence for Eukaryote Survival and Paleontological Strategies. Altenbach, A. V., Bernard, J. M. & Seckbach, J. (eds.). New York: Springer Publishing Company, p. 5-16 12 p. (Cellular Origin, Life in Extreme Habitats and Astrobiologuy).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  45. Published

    Anaerobic free-living protoza: Growth efficiencies and the structure of anaerobic communities

    Fenchel, Tom & Finlay, B. J., 1990, In: FEMS Microbiology Ecology. 74, p. 269-276

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Anaerobic metabolism in the shrimp Crangon crangon exposed to hypoxia, anoxia and hydrogen sulfide

    Hagerman, L. & Vismann, Bent, 1995, In: Marine Biology. 123, p. 235-240

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Anaerobic metabolism, hypoxia and hydrogen sulphide in the brackish water isopod Saduria entomon (L.)

    Hagerman, L. & Vismann, Bent, 1993, In: Marine Biology Research. 38, p. 1-11

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Analgesic use - prevalence, biomonitoring and endocrine and reproductive effects

    Kristensen, D. M., Mazaud-Guittot, S., Gaudriault, P., Lesne, L., Serrano, T., Main, Katharina Maria & Jegou, B., 2016, In: Nature Reviews Endocrinology. 12, 7, p. 381-393 13 p.

    Research output: Contribution to journal › Review › Research › peer-review

  49. Published

    Analogues of a Cyclic Antimicrobial Peptide with a Flexible Linker Show Promising Activity Against Pseudomonas aeruginosa and Staphylococcus aureus

    Thomsen, T. T., Mendel, H. C., Al-Mansour, W., Oddo, A., Løbner-Olesen, Anders & Hansen, Paul Robert, 2020, In: Antibiotics. 9, 7, 13 p., 366.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Analyses of gut microbiota and plasma bile acids enable stratification of patients for antidiabetic treatment

    Gu, Y., Wang, X., Li, J., Zhang, Y., Zhong, H., Liu, R., Zhang, D., Feng, Q., Xie, X., Hong, J., Ren, H., Liu, W., Ma, J., Su, Q., Zhang, H., Yang, J., Wang, X., Zhao, X., Gu, W., Bi, Y. & 11 others, Peng, Y., Xu, X., Xia, H., Li, F., Xu, X., Yang, H., Xu, G., Madsen, L., Kristiansen, Karsten, Ning, G. & Wang, W., 27 Nov 2017, In: Nature Communications. 8, 12 p., 1785.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Analyses of length and age distributions using continuation-ratio logits

    Rindorf, A. & Lewy, P., 2001, In: Canadian Journal of Fisheries and Aquatic Sciences. 58(6), p. 1141-1152

    Research output: Contribution to journal › Journal article › Research

  52. Published

    Analyses of pig genomes provide insight into porcine demography and evolution

    Groenen, M. A., Archibald, A. L., Uenishi, H., Tuggle, C. K., Takeuchi, Y., Rothschild, M. F., Rogel-Gaillard, C., Park, C., Milan, D., Megens, H-J., Li, S., Larkin, D. M., Kim, H., Frantz, L. A. F., Caccamo, M., Ahn, H., Aken, B. L., Anselmo, A., Anthon, C., Auvil, L. & 116 others, Badaoui, B., Beattie, C. W., Bendixen, C., Berman, D., Blecha, F., Blomberg, J., Bolund, L., Bosse, M., Botti, S., Zhan, B., Bystrom, M., Capitanu, B., Carvalho-Silva, D., Chardon, P., Chen, C., Cheng, R., Choi, S., Chow, W., Clark, R. C., Clee, C., Crooijmans, R. P. M. A., Dawson, H. D., Dehais, P., Sapio, F. D., Dibbits, B., Drou, N., Du, Z., Eversole, K., Fadista, J., Fairley, S., Faraut, T., Faulkner, G. J., Fowler, K. E., Fredholm, Merete, Fritz, E., Gilbert, J. G. R., Giuffra, E., Gorodkin, Jan, Griffin, D. K., Harrow, J. L., Hayward, A., Howe, K., Hu, Z., Humphray, S. J., Hunt, T., Jensen, H. H., Jeon, J., Jern, P., Jones, M., Jurka, J., Kanamori, H., Kapetanovic, R., Kim, J., Kim, J., Kim, K., Kim, T., Larson, G., Lee, K., Lee, K., Leggett, R., Lewin, H. A., Li, Y., Liu, W., Loveland, J. E., Lu, Y., Lunney, J. K., Ma, J., Madsen, O., Mann, K., Matthews, L., McLaren, S., Morozumi, T., Murtaugh, M. P., Narayan, J., Nguyen, D. T., Ni, P., Oh, S., Onteru, S., Panitz, F., Park, E., Park, H., Pascal, G., Paudel, Y., Perez-Enciso, M., Ramirez-Gonzalez, R., Reecy, J. M., Rodriguez-Zas, S., Rohrer, G. A., Rund, L., Sang, Y., Schachtschneider, K., Schraiber, J. G., Schwartz, J., Scobie, L., Scott, C., Searle, S., Servin, B., Southey, B. R., Sperber, G., Stadler, P., Sweedler, J. V., Tafer, H., Thomsen, B., Wali, R., Wang, J., Wang, J., White, S., Xu, X., Yerke, M., Zhang, G., Zhang, J., Zhang, J., Zhao, S., Rogers, J., Churcher, C. & Schook, L. B., 2012, In: Nature. 491, 7424, p. 393-398 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    Analysing human genomes at different scales

    Liu, S., 2017, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  54. Published

    Analysis and prediction of leucine-rich nuclear export signals.

    la Cour, T., Kiemer, L., Mølgaard, A., Gupta, R., Skriver, Karen & Brunak, S., 2004, In: Protein Engineering Design and Selection (Print Edition). 17, 6, p. 527-36 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    Analysis of 62 hybrid assembled human Y chromosomes exposes rapid structural changes and high rates of gene conversion

    Skov, L., Schierup, M. H., Danish Pan Genome Consortium, D. P. G. C., Sørensen, L. M., Petersen, Bent, Sibbesen, Jonas Andreas, Liu, S., Belling, K. G., Have, C. T., Bork-Jensen, J., Hansen, Torben, Krogh, Anders, Sørensen, Thorkild I.A., Pedersen, Oluf Borbye, Rasmussen, Simon, Kristiansen, Karsten & Brunak, Søren, 2017, In: PLOS Genetics. 13, 8, p. e1006834

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    Analysis of DOM in the catchment scale: Two European case studies

    Laubel, A., Evans, D., Vang, T., Bowers, D., Stedmon, C., Borch, N. H. & Søndergaard, M., 2004, Dissolved Organic Matter (DOM) in Aquatic Ecosystems: A Study of European Catchments and Coastal Waters. EU project DOMAINE, p. 51-62

    Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

  57. Published

    Analysis of Escherichia coli mutants with altered DNA content

    Trun, N. J., Gottesman, S. & Løbner-Olesen, Anders, 1991, In: Cold Spring Harbor Symposia on Quantitative Biology. 56, p. 353-8 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. Published

    Analysis of Genomic and Transcriptomic Signatures Associated with Amyotrophic Lateral Sclerosis

    Guan, Liping, 2024, Department of Biology, Faculty of Science, University of Copenhagen. 146 p.

    Research output: Book/Report › Ph.D. thesis › Research

  59. Published

    Analysis of Ni2+-induced arrest of Paramecium axonemes

    Larsen, J. & Satir, P., 1991, In: Journal of Cell Science. 99, p. 33-40

    Research output: Contribution to journal › Journal article › Research

  60. Published

    Analysis of RNA metabolism in fission yeast

    Wise, J. A. & Nielsen, Olaf, May 2017, In: Cold Spring Harbor Protocols. 2017, 5, p. 365-372 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Analysis of SOX2 expression in developing human testis and germ cell neoplasia

    Sonne, Si Brask, Perrett, R. M., Nielsen, J. E., Baxter, M. A., Kristensen, D. M., Leffers, H., Hanley, N. A. & Rajpert-De-Meyts, E., 2010, In: International Journal of Developmental Biology. 54, 4, p. 755-760

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    Analysis of Schizosaccharomyces pombe mediator reveals a set of essential subunits conserved between yeast and metazoan cells

    Spåhr, H., Samuelsen, C. O., Baraznenok, V., Ernest, I., Huylebroeck, D., Remacle, J. E., Samuelsson, T., Kieselbach, T., Holmberg, Steen & Gustafsson, C. M., 2001, In: Proceedings of the National Academy of Science of the United States of America. 98, 21, p. 11985-11990 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Analysis of admixed Greenlandic siblings shows that the mean genotypic values for metabolic phenotypes differ between Inuit and Europeans

    Lin, Long, Lepola, Mette Andersen, Stæger, Frederik Filip Vinggaard, Li, Z., Hanghøj, Kristian Ebbesen, Linneberg, Allan René, Grarup, Niels, Jørgensen, M. E., Hansen, Torben, Moltke, Ida & Albrechtsen, Anders, 2024, In: Genome Medicine. 16, 14 p., 71.

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    Analysis of caveolin in primary cilia

    Morthorst, Stine Kjær, Mogensen, J. B., Christensen, Søren Tvorup & Pedersen, Lotte Bang, 2020, Caveolae: Methods and Protocols. Blouin, C. M. (ed.). Humana Press, p. 27-41 (Methods in Molecular Biology, Vol. 2169).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  65. Published

    Analysis of cell-type-specific gene expression during mouse spermatogenesis

    Almstrup, Kristian, Nielsen, J. E., Hansen, M. A., Tanaka, M., Skakkebæk, Niels Erik & Leffers, H., Jun 2004, In: Biology of Reproduction. 70, 6, p. 1751-1761 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    Analysis of complete mitochondrial genomes from extinct and extant rhinoceroses reveals lack of phylogenetic resolution

    Willerslev, Eske, Gilbert, M Thomas P, Binladen, J., Ho, S. Y. W., Campos, P. F., Ratan, A., Tomsho, L. P., da Fonseca, R. R., Sher, A., Kuznetsova, T. V., Nowak-Kemp, M., Roth, T. L., Miller, W. & Schuster, S. C., 2009, In: BMC Evolutionary Biology. 9, p. 95

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    Analysis of gene expression in normal and neoplastic human testis: new roles of RNA

    Novotny, G. W., Nielsen, J. E., Sonne, Si Brask, Skakkebæk, Niels Erik, Rajpert-De Meyts, E., Leffers, H. & Sonne, Si Brask, 2007, In: International Journal of Andrology. 30, 4, p. 316-327

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Published

    Analysis of gene expression profiles of microdissected cell populations indicates that testicular carcinoma in situ is an arrested gonocyte

    Sonne, Si Brask, Almstrup, Kristian, Dalgaard, M., Juncker, A. S., Edsgard, D., Ruban, L., Harrison, N. J., Schwager, C., Abdollahi, A., Huber, P. E., Brunak, Søren, Gjerdrum, L. M., Moore, H. D., Andrews, P. W., Skakkebæk, Niels Erik, Rajpert-De Meyts, E. & Leffers, H., 15 Jun 2009, In: Current Cancer Research. 69, 12, p. 5241-50 10 p.

    Research output: Contribution to journal › Journal article › Research

  69. Published

    Analysis of genes within the schizophrenia-linked 22q11.2 deletion identifies interaction of night owl/LZTR1 and NF1 in GABAergic sleep control

    Maurer, G. W., Malita, Alina, Nagy, S., Koyama, Takashi, Werge, Thomas, Halberg, Kenneth Veland, Texada, Michael James & Rewitz, Kim, 2020, In: PLOS Genetics. 16, 4, 31 p., e1008727.

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    Analysis of heterochromatin dynamics in Schizosaccharomyces pombe: With a special focus on the role of the replication factor Mrc1/Claspin in maintenance of epigenetic silencing

    Charlton, Sebastian Jespersen, 2024, Department of Biology, Faculty of Science, University of Copenhagen. 138 p.

    Research output: Book/Report › Ph.D. thesis › Research

  71. Published

    Analysis of microtubule plus-end-tracking proteins in cilia

    Larsen, J., Grigoriev, I., Akhmanova, A. & Pedersen, Lotte Bang, 2013, Cilia, Part A. Marshall, W. F. (ed.). Elsevier, p. 105-122 18 p. (Methods in Enzymology, Vol. 524).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  72. Published

    Analysis of morphogenetic mutants of hydra - I. The Aberrant

    Schaller, H. C., Schmidt, T., Flick, K. & Grimmelikhuijzen, Cornelis (Cok), Sep 1977, In: Wilhelm Roux's Archives of Developmental Biology. 183, 3, p. 193-206 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    Analysis of morphogenetic mutants of hydra - II. The non-budding mutant

    Schaller, H. C., Schmidt, T., Flick, K. & Grimmelikhuijzen, Cornelis (Cok), Sep 1977, In: Wilhelm Roux's Archives of Developmental Biology. 183, 3, p. 207-214 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    Analysis of morphogenetic mutants of hydra - III. Maxi and Mini

    Schaller, H. C., Schmidt, T., Flick, K. & Grimmelikhuijzen, Cornelis (Cok), Sep 1977, In: Wilhelm Roux's Archives of Developmental Biology. 183, 3, p. 215-222 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    Analysis of primary cilia in directional cell migration in fibroblasts

    Christensen, Søren Tvorup, Veland, I., Schwab, A., Cammer, M. & Satir, P., 2013, In: Methods in Enzymology. 525, p. 45-58 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  76. Published

    Analysis of recent serotype O foot-and-mouth disease viruses from Livestock in Kenya: evidence of four independently evolving lineages

    Wekesa, S. N., Muwanika, V. B., Siegismund, Hans Redlef, Sangula, A. K., Namatovu, A., Dhikusooka, M. T., Tjørnehøj, K., Balinda, S. N., Wadsworth, J., Knowles, N. J. & Belsham, G. J., 2015, In: Transboundary and Emerging Diseases. 62, 3, p. 305-314 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    Analysis of remineralisation, lability, temperature sensitivity and structural composition of organic matter from the upper ocean

    Bendtsen, Jørgen, Hilligsøe, K. M., Hansen, J. L. S. & Richardson, Katherine, 2015, In: Progress in Oceanography. 130, p. 125-145 21 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    Analysis of sex ratios in social insects

    Boomsma, Jacobus J. & Nachman, Gøsta Støger, 2002, Sex Ratio Handbook. Cambridge University Press, p. 93-111

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  79. Published

    Analysis of surface binding sites (SBSs) in carbohydrate active enzymes with focus on glycoside hydrolase families 13 and 77 - a mini-review

    Cockburn, D., Wilkens, C., Ruzanski, C., Andersen, S., Nielsen, J. W., Smith, A. M., Field, R. A., Willemoës, Martin, Abou Hachem, M. & Svensson, B., 2014, In: Biologia. 69, 6, p. 705-712 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    Analysis of surface structures in Cladonia mitis podetia in historical and recent collections from Greenland

    Heide-Jørgensen, H. & Johnsen, I., 1995, Effects of UV-B and ozone on northern forest. Helsinki: Nordic Council of Ministers, p. 56

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  81. Published

    Analysis of surface structures in Cladonia mitis podetia in historical and recent collections from Greenland

    Heide-Jørgensen, H. & Johnsen, I., 1995, Effects of UV-B and ozone on northern forest, TemaNord 579. København, p. 48

    Research output: Chapter in Book/Report/Conference proceeding › Preface/postscript › Research

  82. Published

    Analysis of surface structures of Cladonia mitis podetia in historic and recent collections from Greenland

    Heide-Jørgensen, H. & Johnsen, I., 1995, In: Canadian Journal of Botany. 73, 3, p. 457-464

    Research output: Contribution to journal › Journal article › Research › peer-review

  83. Published

    Analysis of telomerase target gene expression effects from murine models in patient cohorts by homology translation and random survival forest modeling

    Bagger, F. O., Bruedigam, C. & Lane, S. W., 2016, In: Genomics Data. 7, p. 275-280 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  84. Published

    Analysis of the DNA methylome and transcriptome in granulopoiesis reveal timed changes and dynamic enhancer methylation

    Rönnerblad, M., Andersson, Robin, Olofsson, T., Douagi, I., Karimi, M., Lehmann, S., Hoof, I., de Hoon, M., Itoh, M., Nagao-Sato, S., Kawaji, H., Lassmann, T., Carninci, P., Hayashizaki, Y., Forrest, A. R. R., Sandelin, Albin Gustav, Ekwall, K., Arner, E. & Lennartsson, A., 2014, In: Blood. 123, 17

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    Analysis of the behaviours mediating barnacle cyprid reversible adhesion

    Aldred, N., Høeg, Jens Thorvald, Maruzzo, D. & Clare, A. S., 2013, In: P L o S One. 8, 7, 10 p., e68085.

    Research output: Contribution to journal › Journal article › Research › peer-review

  86. Published

    Analysis of the fecal and oral microbiota in chronic recurrent multifocal osteomyelitis

    Rausch, P., Hartmann, M., Baines, J. F. & von Bismarck, P., 2022, In: Arthritis Research and Therapy. 24, 16 p., 54.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    Analysis of the impact of individual glass constituents on electrocatalysis on pt electrodes in alkaline solution

    Mayrhofer, K. J. J., Crampton, A. S., Wiberg, G. K. H. & Arenz, Matthias, 2008, In: Journal of the Electrochemical Society. 155, 6, p. P78-P81

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    Analysis of the interaction between the barley a-amylase/subtilisin inhibitor and the subtilisin Savinase

    Micheelsen, P. O., 2008, Department of Biology: Museum Tusculanum. 107 p.

    Research output: Book/Report › Ph.D. thesis › Research

  89. Published

    Analysis of the sodium recirculation theory of solute-coupled water transport in small intestine

    Larsen, Erik Hviid, Sørensen, Jakob Balslev & Sørensen, J. N., 2002, In: Journal of Physiology. 542, Pt 1, p. 33-50 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Analysis of the structural genes encoding M-factor in the fission yeast Schizosaccharomyces pombe: identification of a third gene, mfm3

    Kjaerulff, S., Davey, W. J., Nielsen, O. & Nielsen, Olaf, 1 Jun 1994, In: Molecular and Cellular Biology. 14, 6, p. 3895-905 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    Analysis of the thecal pattern in the dinoflagellate Heterocapsa rotundata (Lohmann) comb. nov. (=Katodinium rotundatum (Lohmann) Loeblich))

    Hansen, G., 1995, In: Phycologia. 34, p. 166-170

    Research output: Contribution to journal › Journal article › Research

  92. Published

    Analysis of the thecal plate pattern in the dinoflagellate Heterocapsa rotundata (Lohmann) comb. nov. (=Katodinium rotundatum (Lohmann) Loeblich).

    Hansen, Gert, 1995, In: Phycologia. 34, 2, p. 166-170 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  93. Published

    Analysis of time-dependent states of solute coupled water transport

    Larsen, Erik Hviid & Sørensen, J. N., 2009, In: The FASEB Journal.

    Research output: Contribution to journal › Conference abstract in journal › Research

  94. Published

    Analyzing temperature-induced transitions in disordered proteins by NMR spectroscopy and secondary chemical shift analyses

    Kjærgaard, M., Poulsen, F. M. & Kragelund, Birthe Brandt, 2012, Intrinsically disordered protein analysis: methods and experimental tools. Uversky, V. N. & Dunker, A. K. (eds.). Springer, Vol. 2. p. 249-256 8 p. (Methods in Molecular Biology, Vol. 896).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  95. Published

    Anaphase onset before complete DNA replication with intact checkpoint responses.

    Torres-Rosell, J., De Piccoli, G., Cordon-Preciado, V., Farmer, S., Jarmuz, A., Machin, F., Pasero, P., Lisby, Michael, Haber, J. E. & Aragón, L., 2007, In: Science. 315, 5817, p. 1411-5 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  96. Published

    Anatomical adaptations to gradients in soil water of wild species of Poaceae

    Yamauchi, T., Pedersen, Ole, Nakazono, M. & Tsutsumi, N., 2019, p. 25. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  97. Published

    Anatomy and development of an endoparasitic codepod Parachordeumium amphiurae (Herouard) (Cyclopoida, Chrodeumiiddae) living in the brittlestar Amphipholis squamata (Delle Chiaje)

    Østergaard, P., 1998, In: Zoologischer Anzeiger. 236, p. 189-202

    Research output: Contribution to journal › Journal article › Research

  98. Published

    Anatomy and development of an endoparasitic codepod Parachordeumium amphiurea (Herouard) (Cyclopoida, Chrodeumiidae) living in the brittlestar Amphipholis squamata (Delle Chiaje)

    Østergaard, P., 1998, In: Zoologischer Anzeiger. 236, p. 189-202

    Research output: Contribution to journal › Journal article › Research

  99. Published

    Anatomy and ultrastructure of the haustorium of Cassytha pubescens R.Br. - I. The adhesive disk

    Heide-Jørgensen, H., 1991, In: International Journal of Plant Sciences. 152, p. 321-334

    Research output: Contribution to journal › Journal article › Research

  100. Published

    Anatomy of the Tantulocarida : first results obtained using TEM and CLSM: Part I: tantulus larva

    Petrunina, A. S., Høeg, Jens Thorvald & Kolbasov, G. A., 2018, In: Organisms Diversity & Evolution. 18, 4, p. 459-477

    Research output: Contribution to journal › Journal article › Research › peer-review

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