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  1. Published

    The genome of the leaf-cutting ant Acromyrmex echinatior suggests key adaptations to advanced social life and fungus farming

    Nygaard, S., Zhang, G., Schiøtt, M., Li, C., Wurm, Y., Hu, H., Zhou, J., Ji, L., Qiu, F., Rasmussen, M., Pan, H., Hauser, Frank, Krogh, Anders, Grimmelikhuijzen, Cornelis (Cok), Wang, J. & Boomsma, Jacobus J., 2011, In: Genome Research. 21, 8, p. 1339-1348 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    The genome of the mesopolyploid crop species Brassica rapa

    Wang, X., Wang, H., Wang, J., Sun, R., Wu, J., Liu, S., Bai, Y., Mun, J-H., Bancroft, I., Cheng, F., Huang, S., Li, X., Hua, W., Wang, J., Wang, X., Freeling, M., Pires, J. C., Paterson, A., Chalhoub, B., Wang, B. & 79 others, Hayward, A., Sharpe, A., Park, B., Weisshaar, B., Liu, B., Li, B., Liu, B., Tong, C., Song, C., Duran, C., Peng, C., Geng, C., Koh, C., Lin, C., Edwards, D., Mu, D., Shen, D., Soumpourou, E., Li, F., Fraser, F., Conant, G., Lassalle, G., King, G., Bonnema, G., Tang, H., Wang, H., Belcram, H., Zhou, H., Hirakawa, H., Abe, H., Guo, H., Wang, H., Jin, H., Parkin, I., Batley, J., Kim, J., Just, J., Li, J., Xu, J., Deng, J., Kim, J. H., Li, J., Yu, J., Meng, J., Wang, J., Min, J., Poulain, J., Hatakeyama, K., Wu, K., Wang, L., Fang, L., Trick, M., Links, M., Zhao, M., Jin, M., Ramchiary, N., Drou, N., Berkman, P., Cai, Q., Huang, Q., Li, R., Tabata, S., Cheng, S., Zhang, S., Zhang, S., Huang, S., Sato, S., Sun, S., Kwon, S., Choi, S., Lee, T., Fan, W., Zhao, X., Tan, X., Xu, X., Wang, Y., Qiu, Y., Yin, Y. & Li, Y., 2011, In: Nature Genetics. 43, 10, p. 1035-1039 5 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  3. Published

    The genome of the model beetle and pest Tribolium castaneum.

    Richards, S., Principal investigators, Gibbs, R. A., Weinstock, G. M., White paper, Brown, S. J., Denell, R., Beeman, R. W., Gibbs, R., Analysis leaders, Beeman, R. W., Brown, S. J., Bucher, G., Friedrich, M., Grimmelikhuijzen, C. J. P., Klingler, M., Lorenzen, M., Richards, S., Roth, S., Schröder, R. & 56 others, Tautz, D., Zdobnov, E. M., DNA sequence and global analysis: DNA sequencing, D. S. A. G. A. D. S., Muzny, D., Gibbs, R. A., Weinstock, G. M., Attaway, T., Bell, S., Buhay, C. J., Chandrabose, M. N., Chavez, D., Clerk-Blankenburg, K. P., Cree, A., Dao, M., Davis, C., Chacko, J., Dinh, H., Dugan-Rocha, S., Fowler, G., Garner, T. T., Garnes, J., Gnirke, A., Hawes, A., Hernandez, J., Hines, S., Holder, M., Hume, J., Jhangiani, S. N., Joshi, V., Khan, Z. M., EST sequencing, E. S., genome assembly, G. A., G+C content, G. C., repetitive DNA, transposons and telomeres, R. D. T. A. T., gene prediction and consensus gene set, G. P. A. C. G. S., global gene content analysis, G. G. C. A., Developmental processes and signalling pathways, D. P. A. S. P., Pest biology, senses, Medea and RNAi: ligand gated ion channels, P. B. S. M. A. R. L. G. I. C., oxidative phosphorylation, O. P., P450 genes, P. G., chitin and cuticular proteins, C. A. C. P., digestive proteinases, D. P., immunity, I., neurohormones and GPCRs, N. A. G., Grimmelikhuijzen, Cornelis (Cok), Hauser, Frank, Cazzamali, G., Williamson, M., Tribolium Genome Sequencing Consortium, T. G. S. C., Project leader, P. L., neuropeptide processing enzymes, N. P. E., opsins, O., odorant receptors and gustatory receptors, O. R. A. G. R., odorant binding and chemosensory proteins, O. B. A. C. P., Medea, M. & systemic RNAi, S. R., 2008, In: Nature. 452, 7190, p. 949-955 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    The genome of the pear (Pyrus bretschneideri Rehd.)

    Wu, J., Wang, Z., Shi, Z., Zhang, S., Ming, R., Zhu, S., Khan, M. A., Tao, S., Korban, S. S., Wang, H., Chen, N. J., Nishio, T., Xu, X., Cong, L., Qi, K., Huang, X., Wang, Y., Zhao, X., Wu, J., Deng, C. & 40 others, Gou, C., Zhou, W., Yin, H., Qin, G., Sha, Y., Tao, Y., Chen, H., Yang, Y., Song, Y., Zhan, D., Wang, J., Li, L., Dai, M., Gu, C., Wang, Y., Shi, D., Wang, X., Zhang, H., Zeng, L., Zheng, D., Wang, C., Chen, M., Wang, G., Xie, L., Sovero, V., Sha, S., Huang, W., Zhang, S., Zhang, M., Sun, J., Xu, L., Li, Y., Liu, X., Li, Q., Shen, J., Wang, J., Paull, R., Bennetzen, J., Wang, J. & Zhang, S., 2013, In: Genome Research. 23, 2, p. 396-408 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    The genome of the simian and human malaria parasite Plasmodium knowlesi

    Pain, A., Böhme, U., Berry, A. E., Mungall, K., Finn, R. D., Jackson, A. P., Mourier, T., Mistry, J., Pasini, E. M., Aslett, M. A., Balasubrammaniam, S., Borgwardt, K., Brooks, K., Carret, C., Carver, T. J., Cherevach, I., Chillingworth, T., Clark, T. G., Galinski, M. R., Hall, N. & 34 others, Harper, D., Harris, D., Hauser, H., Ivens, A., Janssen, C. S., Keane, T., Larke, N., Lapp, S., Marti, M., Moule, S., Meyer, I. M., Ormond, D., Peters, N., Sanders, M., Sanders, S., Sargeant, T. J., Simmonds, M., Smith, F., Squares, R., Thurston, S., Tivey, A. R., Walker, D., White, B., Zuiderwijk, E., Churcher, C., Quail, M. A., Cowman, A. F., Turner, C. M. R., Rajandream, M. A., Kocken, C. H. M., Thomas, A. W., Newbold, C. I., Barrell, B. G. & Berriman, M., 2008, In: Nature. 455, 7214, p. 799-803 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    The genome of the social amoeba Dictyostelium discoideum.

    Eichinger, L., Pachebat, J. A., Glöckner, G., Rajandream, M-A., Sucgang, R., Berriman, M., Song, J., Olsen, R., Szafranski, K., Xu, Q., Tunggal, B., Kummerfeld, S., Madera, M., Konfortov, B. A., Rivero, F., Bankier, A. T., Lehmann, R., Hamlin, N., Davies, R., Gaudet, P. & 77 others, Fey, P., Pilcher, K., Chen, G., Saunders, D., Sodergren, E., Davis, P., Kerhornou, A., Nie, X., Hall, N., Anjard, C., Hemphill, L., Bason, N., Farbrother, P., Desany, B., Just, E., Morio, T., Rost, R., Churcher, C., Cooper, J., Haydock, S., van Driessche, N., Cronin, A., Goodhead, I., Muzny, D., Mourier, T., Pain, A., Lu, M., Harper, D., Lindsay, R., Hauser, H., James, K., Quiles, M., Madan Babu, M., Saito, T., Buchrieser, C., Wardroper, A., Felder, M., Thangavelu, M., Johnson, D., Knights, A., Loulseged, H., Mungall, K., Oliver, K., Price, C., Quail, M. A., Urushihara, H., Hernandez, J., Rabbinowitsch, E., Steffen, D., Sanders, M., Ma, J., Kohara, Y., Sharp, S., Simmonds, M., Spiegler, S., Tivey, A., Sugano, S., White, B., Walker, D., Woodward, J., Winckler, T., Tanaka, Y., Shaulsky, G., Schleicher, M., Weinstock, G., Rosenthal, A., Cox, E. C., Chisholm, R. L., Gibbs, R., Loomis, W. F., Platzer, M., Kay, R. R., Williams, J., Dear, P. H., Noegel, A. A., Barrell, B. & Kuspa, A., 2005, In: Nature. 435, 7038, p. 43-57 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    The genome sequence of the lactic acid bacterium, Carnobacterium maltaromaticum ATCC 35586 encodes potential virulence factors

    Leisner, Jørgen, Hansen, M. A., Larsen, M. H., Hansen, L., Ingmer, Hanne & Sørensen, Søren Johannes, 2012, In: International Journal of Food Microbiology. 152, 3, p. 107-115 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    The genomes of two key bumblebee species with primitive eusocial organization

    Sadd, B. M., Barribeau, S. M., Bloch, G., de Graaf, D. C., Dearden, P., Elsik, C. G., Gadau, J., Grimmelikhuijzen, C., Hasselmann, M., Lozier, J. D., Robertson, H. M., Smagghe, G., Stolle, E., Van Vaerenbergh, M., Waterhouse, R. M., Bornberg-Bauer, E., Klasberg, S., Bennett, A. K., Câmara, F., Guigó, R. & 124 others, Hoff, K., Mariotti, M., Munoz-Torres, M., Murphy, T., Santesmasses, D., Amdam, G. V., Beckers, M., Beye, M., Biewer, M., Bitondi, M. M., Blaxter, M. L., Bourke, A. F., Brown, M. J., Buechel, S. D., Cameron, R., Cappelle, K., Carolan, J. C., Christiaens, O., Ciborowski, K. L., Clarke, D. F., Colgan, T. J., Collins, D. H., Cridge, A. G., Dalmay, T., Dreier, S., du Plessis, L., Duncan, E., Erler, S., Evans, J., Falcon, T., Flores, K., Freitas, F. C., Fuchikawa, T., Gempe, T., Hartfelder, K., Hauser, Frank, Helbing, S., Humann, F. C., Irvine, F., Jermiin, L. S., Johnson, C. E., Johnson, R. M., Jones, A. K., Kadowaki, T., Kidner, J. H., Koch, V., Köhler, A., Kraus, F. B., Lattorff, H. M. G., Leask, M., Lockett, G. A., Mallon, E. B., Antonio, D. S. M., Marxer, M., Meeus, I., Moritz, R. F., Nair, A., Näpflin, K., Nissen, I., Niu, J., Nunes, F. M., Oakeshott, J. G., Osborne, A., Otte, M., Pinheiro, D. G., Rossié, N., Rueppell, O., Santos, C. G., Schmid-Hempel, R., Schmitt, B. D., Schulte, C., Simões, Z. L., Soares, M. P., Swevers, L., Winnebeck, E. C., Wolschin, F., Yu, N., Zdobnov, E. M., Aqrawi, P. K., Blankenburg, K. P., Coyle, M., Francisco, L., Hernandez, A. G., Holder, M., Hudson, M. E., Jackson, L., Jayaseelan, J., Joshi, V., Kovar, C., Lee, S. L., Mata, R., Mathew, T., Newsham, I. F., Ngo, R., Okwuonu, G., Pham, C., Pu, L., Saada, N., Santibanez, J., Simmons, D., Thornton, R., Venkat, A., Walden, K. K., Wu, Y., Debyser, G., Devreese, B., Asher, C., Blommaert, J., Chipman, A. D., Chittka, L., Fouks, B., Liu, J., O'Neill, M. P., Sumner, S., Puiu, D., Qu, J., Salzberg, S. L., Scherer, S. E., Muzny, D. M., Richards, S., Robinson, G. E., Gibbs, R. A., Schmid-Hempel, P. & Worley, K. C., 2015, In: Genome Biology (Online Edition). 16, 31 p., 76.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    The genomic and phenotypic diversity of Schizosaccharomyces pombe

    Jeffares, D. C., Rallis, C., Rieux, A., Speed, D., Převorovský, M., Mourier, T., Marsellach, F. X., Iqbal, Z., Lau, W., Cheng, T. M. K., Pracana, R., Mülleder, M., Lawson, J. L. D., Chessel, A., Bala, S., Hellenthal, G., O'Fallon, B., Keane, T., Simpson, J. T., Bischof, L. & 22 others, Tomiczek, B., Bitton, D. A., Sideri, T., Codlin, S., Hellberg, J. E. E. U., van Trigt, L., Jeffery, L., Li, J., Atkinson, S., Thodberg, Malte, Febrer, M., McLay, K., Drou, N., Brown, W., Hayles, J., Salas, R. E. C., Ralser, M., Maniatis, N., Balding, D. J., Balloux, F., Durbin, R. & Bähler, J., 2015, In: Nature Genetics. 47, 3, p. 235-241 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    The genomic basis of the plant island syndrome in Darwin’s giant daisies

    Cerca, J., Petersen, B., Lazaro-Guevara, J. M., Rivera-Colón, A., Birkeland, S., Vizueta, J., Li, S., Li, Q., Loureiro, J., Kosawang, C., Díaz, P. J., Rivas-Torres, G., Fernández-Mazuecos, M., Vargas, P., McCauley, R. A., Petersen, G., Santos-Bay, L., Wales, N., Catchen, J. M., Machado, D. & 9 others, Nowak, M. D., Suh, A., Sinha, N. R., Nielsen, Lene Rostgaard, Seberg, Ole, Gilbert, M Thomas P, Leebens-Mack, J. H., Rieseberg, L. H. & Martin, M. D., 2022, In: Nature Communications. 13, 13 p., 3729.

    Research output: Contribution to journal › Journal article › Research › peer-review

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