Department of Biology

 

 
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  1. Published

    Testing Focus Groups as a Tool for Connecting Indigenous and Local Knowledge on Abundance of Natural resources with Science-Based Land Management Systems

    Danielsen, F., Jensen, Per Moestrup, Burgess, Neil David, Coronado, I., Holt, S., Poulsen, M. K., Rueda, R. M., Skielboe, T., Enghoff, M., Hemmingsen, L. H., Sørensen, Marten & Pirhofer-Walzl, K., 2014, In: Conservation Letters. 7, 4, p. 380-389 10 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  2. Published

    Testing biological pesticide indices for Danish streams

    Rasmussen, J. J. (ed.), Wiberg-Larsen, P. (ed.), Friberg, N. (ed.), Jacobsen, Dean (ed.) & Baattrup-Pedersen, A., 2019, Ministry of Envrionment and Food of Denmark. 123 p. (Pesticides Research, Vol. 180).

    Research output: Book/Report › Report › Research

  3. Published

    Testing cophylogeny between coral reef invertebrates and their bacterial and archaeal symbionts

    O'Brien, P. A., Andreakis, N., Tan, S., Miller, D. J., Webster, N. S., KU, thw266 & Bourne, D. G., 2021, In: Molecular Ecology. 30, 15, p. 3768-3782 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Testing for Hardy-Weinberg equilibrium in structured populations using genotype or low-depth next generation sequencing data

    Meisner, Jonas & Albrechtsen, Anders, 2019, In: Molecular Ecology Resources. 19, 5, p. 1144-1152 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Testing for spatial clustering of amino acid replacements within protein tertiary structure.

    Yu, J. & Thorne, J. L., 2006, In: Journal of Molecular Evolution. 62, 6, p. 682-92 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Testing parametric models in linear-directional regression

    Garcia Portugues, E., van Keilegom, I., Crujeiras, R. M. & González-Manteiga, W., 2016, In: Scandinavian Journal of Statistics. 43, 4, p. 1178-1191 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Testing the adjustable threshold model for intruder recognition on Myrmica ants in the context of a social parasite

    Fürst, M. A., Durey, M. & Nash, David Richard, 2012, In: Proceedings of the Royal Society B: Biological Sciences. 279, 1728, p. 516-522 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Testing the performance of beta diversity measures based on incidence data: the robustness to undersampling

    Bondoso Cardoso, P. M., Borges, P. A. V. & Veech, J. A., 2009, In: Diversity and Distributions-a Journal of Biological Invasions and Biodiversity. 15, 6, p. 1081-1090

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Testing the stress-gradient hypothesis with aquatic detritivorous invertebrates

    Fugère, V., Andino, P., Espinosa, R., Anthelme, F., Jacobsen, Dean & Dangles, O., 2012, In: Journal of Animal Ecology. 81, 6, p. 1259-1267 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Testing the stress-gradient hypothesis with aquatic detritivorous invertebrates: insights for biodiversity-ecosystem functioning research

    Fugere, V., Andino, P., Espinosa, R., Anthelme, F., Jacobsen, Dean & Dangles, O., 2012, In: Journal of Animal Ecology.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Testosterone-induced depression of male parental behavior in the barn swallow: female compensation and effects on seasonal fitness

    Møller, A. P. & et al, 1995, In: Behav.Ecol.Sociobiol.. 36, p. 151-157

    Research output: Contribution to journal › Journal article › Research

  12. Published

    Tetra ponera ants have gut symbionts related to nitrogen-fixing root nodule bacteria

    Van Borm, S., Buschinger, A., Boomsma, Jacobus J. & Billen, J., 2002, In: Proceedings of the Royal Society of London. Biological Sciences. B. 269, p. 2023-2027

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Tetrahymena cilia - not just oars on a boat

    Guerra, C. F., Christensen, Søren Tvorup, Awan, A., Bell, A., Jabbour, N., Valentin, T. & Satir, P., 2003, In: Molecular Biology of the Cell. vol. 14, p. 434a

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Tetrahymena recovering from a heavy accumulation of a gold salt

    Nilsson, J. R., 1997, In: Acta Protozoologica. vol. 36, nr. 2, p. 111-119

    Research output: Contribution to journal › Journal article › Research

  15. Published

    Tetranectin-Binding Site on Plasminogen Kringle 4 Involves the Lysine-Binding Pocket and at Least One Additional Amino Acid Residue

    Graversen, J. H., Sigurskjold, B. W., Thøgersen, H. C. & Etzerodt, M., 2000, In: Biochemistry. 39, p. 7414-7419

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    The importance of macro- versus microstructure in modulating light levels inside coral colonies

    Kaniewska, P., Magnusson, S. H., Anthony, K. R. N., Reef, R., Kühl, Michael & Hoegh-Guldberg, O., 2011, In: Journal of Phycology. 47, 4, p. 846-860 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    The "crème brûlée" sampler: a new high-resolution method for the vertical sampling of intertidal fine sediments

    Laviale, M., Ezequiel, J., Pais, C., Sousa Dias Cartaxana, P. J. & Serôdio, J., 2015, In: Journal of Experimental Marine Biology and Ecology. 468, p. 37-44

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    The "isohydric trap": a proposed feedback between water shortage, stomatal regulation, and nutrient acquisition drives differential growth and survival of European pines under climatic dryness

    Salazar-Tortosa, D., Castro, J., Villar-Salvador, P., Viñegla, B., Matías, L., Michelsen, Anders, Rubio de Casas, R. & Querejeta, J. I., 2018, In: Global Change Biology. 24, 9, p. 4069-4083

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    The "soil microbial loop" is not always needed to explain protozoan stimulation of plants

    Ekelund, Flemming, Saj, S., Madsen, M. V., Bertaux, J. & Juha, M., 2009, In: Soil Biology & Biochemistry. 41, 11, p. 2336-2342 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    The "tridentata Parasite" of Mallomonas teilingii (Synurophyceae) - a New Dinophyte? - or What?

    Kristiansen, J., 1993, In: Arch. Protistenkd.. 143, p. 195-214

    Research output: Contribution to journal › Journal article › Research

  21. Published

    The 'relics of Joan of Arc': a forensic multidisciplinary analysis

    Charlier, P., Poupon, J., Eb, A., De Mazancourt, P., Gilbert, M Thomas P, Huynh-Charlier, I., Loublier, Y., Verhille, A. M., Moulheirat, C., Patou-Mathis, M., Robbiola, L., Montagut, R., Masson, F., Etcheberry, A., Brun, L., Willerslev, Eske, de la Grandmaison, G. L. & Durigon, M., 2010, In: Forensic Science International. 194, 1-3, p. e9-15 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    The -250G>A promoter variant in hepatic lipase associates with elevated fasting serum high-density lipoprotein cholesterol modulated by interaction with physical activity in a study of 16,156 Danish subjects

    Grarup, N., Andreasen, C. H., Lepola, Mette Andersen, Albrechtsen, Anders, Sandbaek, A., Lauritzen, T., Borch-Johnsen, K., Jørgensen, T., Schmitz, O., Hansen, T. & Pedersen, Oluf Borbye, 2008, In: Journal of Clinical Endocrinology and Metabolism. 93, 6, p. 2294-9 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    The 18-kilodalton Chlamydia trachomatis histone H1-like protein (Hc1) contains a potential N-terminal dimerization site and a C-terminal nucleic acid-binding domain.

    Pedersen, Lotte Bang, Birkelund, S., Holm, A., Ostergaard, S. & Christiansen, G., 1996, In: Journal of Bacteriology. 178, 4, p. 994-1002 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    The 20S proteasome as an assembly platform for the 19S regulatory complex

    Hendil, K. A. B., Kriegenburg, F., Tanaka, K., Murata, S., Lauridsen, A. B., Johnsen, A. H. & Hartmann-Petersen, Rasmus, 2009, In: Journal of Molecular Biology. 394, 2, p. 320-328 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    The 3' region of human papillomavirus type 16 early mRNAs decrease expression

    Vinther, Jeppe, Rosenstierne, M. W., Kristiansen, K. & Norrild, B., 2005, In: BMC Infectious Diseases. 5, p. 83

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    The 4.5 S RNA gene of Escherichia coli is essential for cell growth

    Brown, Stanley & Fournier, M. J., 1984, In: Journal of Molecular Biology. 178, 3, p. 533-50 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    The Gonyaulax spinifera (Dinophyceae) "complex": Perpetuating the paradox?

    Rochon, A., Lewis, J., Ellegaard, Marianne & Harding, I. C., 2009, In: Review of Palaeobotany and Palynology. 155, 1-2, p. 52-60

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    The Inhibitor of wax 1 locus (Iw1) prevents formation of β- and OH-β-diketones in wheat cuticular waxes and maps to a sub-cM interval on chromosome arm 2BS

    Adamski, N., Bush, M., Simmonds, J., Turner, A., Mugford, S., Jones, A., Findlay, K., Pedentchouk, N., von Wettstein, Penny & Uauy, C., 2013, In: Plant Journal. 74, 6, p. 989-1002 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    The Xylariaceae of Ecuador - an update

    Læssøe, Thomas, 2002, Ikke angivet. IMC7, p. 50

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

  30. Published

    The bchU gene of Chlorobium tepidum encodes the C-20 methyltransferase in bacteriochlorophyll c biosynthesis

    Maresca, J. A., Gomez Maqueo Chew, A., Ponsatí, M. R., Frigaard, Niels-Ulrik, Ormerod, J. G. & Bryant, D. A., 2004, In: Journal of Bacteriology. 186, 9, p. 2558-2566 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    The cda GenoTox assay: A new sensitive method for detection of environmental genotoxins, including nitroarenes and aromatic amines

    Østergaard, T. G., Hansen, Lars Hestbjerg, Binderup, M., Norman, A. & Sørensen, Søren Johannes, 2007, In: Mutation Research - Reviews. 631, 2, p. 77-84

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    The in vivo biofilm

    Bjarnsholt, Thomas, Alhede, M., Alhede, M., Eickhardt-Sørensen, S. R., Moser, Claus Ernst, Kühl, Michael, Jensen, Peter Østrup & Høiby, Niels, 2013, In: Trends in Microbiology. 21, 9, p. 466-474 9 p.

    Research output: Contribution to journal › Review › Research › peer-review

  33. Published

    The Arabidopsis thaliana mRNA decay factor PAT1 functions in osmotic stress responses and decaps ABA-responsive genes

    Zuo, Zhangli Thomsen, Roux, M. E., Sæmundsson, H. P., Müller, M., Bosch, S. M. & Petersen, Morten, 2021, In: FEBS Letters. 595, 2, p. 253-263 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes

    Liu, S., Liu, Y., Yang, X., Tong, C., Edwards, D., Parkin, I. A. P., Zhao, M., Ma, J., Yu, J., Huang, S., Wang, X., Wang, J., Lu, K., Fang, Z., Bancroft, I., Yang, T-J., Hu, Q., Wang, X., Yue, Z., Li, H. & 66 others, Yang, L., Wu, J., Zhou, Q., Wang, W., King, G. J., Pires, J. C., Lu, C., Wu, Z., Sampath, P., Wang, Z., Guo, H., Pan, S., Yang, L., Min, J., Zhang, D., Jin, D., Li, W., Belcram, H., Tu, J., Guan, M., Qi, C., Du, D., Li, J., Jiang, L., Batley, J., Sharpe, A. G., Park, B., Ruperao, P., Cheng, F., Waminal, N. E., Huang, Y., Dong, C., Wang, L., Li, J., Hu, Z., Zhuang, M., Huang, Y., Huang, J., Shi, J., Mei, D., Liu, J., Lee, T., Wang, J., Jin, H., Li, Z., Li, X., Zhang, J., Xiao, L., Zhou, Y., Liu, Z., Liu, X., Qin, R., Tang, X., Liu, W., Wang, Y., Zhang, Y., Lee, J., Kim, H. H., Denoeud, F., Xu, X., Liang, X., Hua, W., Wang, X., Wang, J., Chalhoub, B. & Paterson, A. H., 2014, In: Nature Communications. 5, 11 p., 3930.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    The Cer-cqu gene cluster determines three key players in a β-diketone synthase polyketide pathway synthesizing aliphatics in epicuticular waxes

    Schneider, L. M., Adamski, N. M., Christensen, Caspar Elo, Stuart, D. B., Vautrin, S., Hansson, M., Uauy, C. & von Wettstein, Penny, 2016, In: Journal of Experimental Botany. 67, 9, p. 2715-2730 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    The Clausena lansium (Wampee) genome reveal new insights into the carbazole alkaloids biosynthesis pathway

    Fan, Y., Sahu, S. K., Yang, T., Mu, W., Wei, J., Cheng, L., Yang, J., Liu, J., Zhao, Y., Lisby, Michael & Liu, Huan, 2021, In: Genomics. 113, 6, p. 3696-3704 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    The Cycas genome and the early evolution of seed plants

    Liu, Y., Wang, S., Li, L., Yang, T., Dong, S., Wei, T., Wu, S., Liu, Y., Gong, Y., Feng, X., Ma, J., Chang, G., Huang, J., Yang, Y., Wang, H., Liu, M., Xu, Y., Liang, H., Yu, J., Cai, Y. & 45 others, Zhang, Z., Fan, Y., Mu, W., Sahu, S. K., Liu, S., Lang, X., Yang, L., Li, N., Habib, S., Yang, Y., Lindstrom, A. J., Liang, P., Goffinet, B., Zaman, S., Wegrzyn, J. L., Li, D., Liu, J., Cui, J., Sonnenschein, E. C., Wang, X., Ruan, J., Xue, J., Shao, Z., Song, C., Fan, G., Li, Z., Zhang, L., Liu, J., Liu, Z., Jiao, Y., Wang, X., Wu, H., Wang, E., Lisby, Michael, Yang, H., Wang, J., Liu, X., Xu, X., Li, N., Soltis, P. S., Van de Peer, Y., Soltis, D. E., Gong, X., Liu, H. & Zhang, S., 2022, In: Nature Plants. 8, 4, p. 389-401 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    The Drosophila gut: a gatekeeper and coordinator of organism fitness and physiology

    Colombani, Julien & Andersen, Ditte Skovaa, 2020, In: Wiley Interdisciplinary Reviews: Developmental Biology. 9, 6, 19 p., e378.

    Research output: Contribution to journal › Review › Research › peer-review

  39. Published

    The E. coli HicB Antitoxin Contains a Structurally Stable Helix-Turn-Helix DNA Binding Domain

    Manav, M. C., Turnbull, K. J., Jurėnas, D., Garcia-Pino, A., Gerdes, K. & Brodersen, D. E., 2019, In: Structure. 27, 11, p. 1675-1685, e1-e3

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    The Opisthorchis viverrini genome provides insights into life in the bile duct

    Young, N. D., Nagarajan, N., Lin, S. J., Korhonen, P. K., Jex, A. R., Hall, R. S., Safavi-Hemami, H., Kaewkong, W., Bertrand, D., Gao, S., Seet, Q., Wongkham, S., Teh, B. T., Wongkham, C., Intapan, P. M., Maleewong, W., Yang, X., Hu, M., Wang, Z., Hofmann, A. & 4 others, Sternberg, P. W., Tan, P., Wang, J. & Gasser, R. B., 2014, In: Nature Communications. 5, 11 p., 4378.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    The Sinocyclocheilus cavefish genome provides insights into cave adaptation

    Yang, J., Chen, X., Bai, J., Fang, D., Qiu, Y., Jiang, W., Yuan, H., Bian, C., Lu, J., He, S., Pan, X., Zhang, Y., Wang, X., You, X., Wang, Y., Sun, Y., Mao, D., Liu, Y., Fan, G., Zhang, H. & 21 others, Chen, X., Zhang, X., Zheng, L., Wang, J., Cheng, L., Chen, J., Ruan, Z., Li, J., Yu, H., Peng, C., Ma, X., Xu, J., He, Y., Xu, Z., Xu, P., Wang, J., Yang, H., Wang, J., Whitten, T., Xu, X. & Shi, Q., 2016, In: B M C Biology. 14, 13 p., 1.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    The Symbiodinium kawagutii genome illuminates dinoflagellate gene expression and coral symbiosis

    Lin, S., Cheng, S., Song, B., Zhong, X., Lin, X., Li, W., Li, L., Zhang, Y., Zhang, H., Ji, Z., Cai, M., Zhuang, Y., Shi, X., Lin, L., Wang, L., Wang, Z., Liu, X., Yu, S., Zeng, P., Hao, H. & 13 others, Zou, Q., Chen, C., Li, Y., Wang, Y., Xu, C., Meng, S., Xu, X., Wang, J., Yang, H., Campbell, D. A., Sturm, N. R., Dagenais-Bellefeuille, S. & Morse, D., 2015, In: Science. 350, 6261, p. 691-694 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    The Tetragnatha kauaiensis Genome Sheds Light on the Origins of Genomic Novelty in Spiders

    Cerca, J., Armstrong, E. E., Vizueta Moraga, Joel, Fernández, R., Dimitrov, D., Petersen, Bent, Prost, S., Rozas, J., Petrov, D. & Gillespie, R. G., 2021, In: Genome Biology and Evolution. 13, 12, 17 p., evab262.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    The n-dimensional hypervolume

    Blonder, B., Lamanna, C., Violle, C. & Enquist, B. J., 2014, In: Global Ecology and Biogeography. 23, 5, p. 595-609 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    The A- and B-type muscarinic acetylcholine receptors from Drosophila melanogaster couple to different second messenger pathways

    Ren, G. R., Folke, J., Hauser, Frank, Li, S. & Grimmelikhuijzen, Cornelis (Cok), 2015, In: Biochemical and Biophysical Research Communications. 462, 4, p. 358-364 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    The ABA/LANCL1/2 Hormone/Receptor System Controls Adipocyte Browning and Energy Expenditure

    Spinelli, S., Cossu, V., Passalacqua, M., Hansen, Jacob B., Guida, L., Magnone, M., Sambuceti, G., Marini, C., Sturla, L. & Zocchi, E., 2023, In: International Journal of Molecular Sciences. 24, 4, 27 p., 3489.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    The AIMe registry for artificial intelligence in biomedical research

    Matschinske, J., Alcaraz, N., Benis, A., Golebiewski, M., Grimm, D. G., Heumos, L., Kacprowski, T., Lazareva, O., List, M., Louadi, Z., Pauling, J. K., Pfeifer, N., Röttger, R., Schwämmle, V., Sturm, G., Traverso, A., Van Steen, K., de Freitas, M. V., Villalba Silva, G. C., Wee, L. & 5 others, Wenke, N. K., Zanin, M., Zolotareva, O., Baumbach, J. & Blumenthal, D. B., 2021, In: Nature Methods. 18, 10, p. 1128-1131 4 p.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  48. Published

    The Acidic Tumor Microenvironment as a Driver of Cancer

    Boedtkjer, E. & Pedersen, Stine Helene Falsig, 2020, In: Annual Review of Physiology. 82, p. 103-126

    Research output: Contribution to journal › Review › Research › peer-review

  49. Published

    The Advancement in Spring Vegetation Phenology in the Northern Hemisphere Will Reverse After 2060 Under Future Moderate Warming Scenarios

    Mo, Y., Chen, S., Wu, Z., Tang, Jing & Fu, Y., 2024, In: Earth's Future. 12, 3, 17 p., e2023EF003788.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    The African migration and wintering grounds of the Aquatic Warbler Acrocephalus paludicola

    Schäffer, N., Walther, B. A., Gutteridge, K. & Rahbek, Carsten, 2006, In: Bird Conservation International. 16, 1, p. 33-56

    Research output: Contribution to journal › Journal article › Research › peer-review

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