- Published
Evolutionary and biomedical insights from a marmoset diploid genome assembly
Yang, C., Zhou, Y., Marcus, S., Formenti, G., Bergeron, L. A., Song, Z., Bi, X., Bergman, J., Rousselle, M. M. C., Zhou, C., Zhou, L., Deng, Y., Fang, M., Xie, D., Zhu, Y., Tan, S., Mountcastle, J., Haase, B., Balacco, J., Wood, J. & 13 others, , 2021, In: Nature. 594, p. 227-233Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A combined algorithm for automated drainage network extraction from digital elevation models
Yan, Y., Tang, Jing & Pilesjo, P., 2018, In: Hydrological Processes. 32, 10, p. 1322-1333 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Diverse Aquatic Animal Matrices Play a Key Role in Survival and Potential Virulence of Non-O1/O139 Vibrio cholerae Isolates
Yan, L., Jin, Y., Zhang, B., Xu, Y., Peng, Xu, Qin, S. & Chen, L., 2022, In: Frontiers in Microbiology. 13, 21 p., 896767.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques
Yan, G., Zhang, G., Fang, X., Zhang, Y., Li, C., Ling, F., Cooper, D. N., Li, Q., Li, Y., van Gool, A. J., Du, H., Chen, J., Chen, R., Zhang, P., Huang, Z., Thompson, J. R., Meng, Y., Bai, Y., Wang, J., Zhuo, M. & 26 others, , 2011, In: Nature Biotechnology. 29, 11, p. 1019-1023 5 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Anatomical adaptations to gradients in soil water of wild species of Poaceae
Yamauchi, T., Pedersen, Ole, Nakazono, M. & Tsutsumi, N., 2019, p. 25. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
- Published
Regulation of root traits for internal aeration and tolerance to soil waterlogging-flooding stress
Yamauchi, T., Colmer, T. D., Pedersen, Ole & Nakazono, M., 2018, In: Plant Physiology. 176, 2, p. 1118-1130Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Key root traits of Poaceae for adaptation to soil water gradients
Yamauchi, T., Pedersen, Ole, Nakazono, M. & Tsutsumi, N., 2021, In: New Phytologist. 229, 6, p. 3133-3140Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Molecular mechanisms that underlie the root cortex expansion in response to low oxygen
Yamauchi, T., Sumi, K., Morishita, H., Pedersen, Ole, Inukai, Y. & Nakazono, M., 2022, p. 22.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
- Published
Neuroendocrine control of Drosophila larval light preference
Yamanaka, N., Romero, N. M., Martin, F. A., Rewitz, Kim, Sun, M., O´Connor, M. B. & Léopold, P., 2013, In: Science. 341, 6150, p. 1113-1116 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Evolution of sex determination and sexually dimorphic larval sizes in parasitic barnacles
Yamaguchi, S., Høeg, Jens Thorvald & Iwasa, Y., 2014, In: Journal of Theoretical Biology. 347, p. 7-16 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
ASPIRE: The Amundsen Sea Polynya International Research Expedition
Yager, P. L., Sherrell, R. M., Stammerjohn, S. E., Alderkamp, A., Schofield, O., Abrahamsen, E. P., Arrigo, K. R., Bertilsson, S., Garay, D. L., Guerrero, R., Lowry, K. E., Moksnes, P., Ndungu, K., Post, A. F., Randall-Goodwin, E., Riemann, Lasse, Severmann, S., Thatje, S., Dijken, G. L. V. & Wilson, S., 2012, In: Oceanography. 25, 3, p. 40-53 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A carbon budget for the Amundsen Sea Polynya, Antarctica: estimating net community production and export in a highly productive polar ecosystem
Yager, P. L., Sherrell, R. M., Stammerjohn, S. E., Ducklow, H. W., Schofield, O. M. E., Ingall, E. D., Wilson, S. E., Lowry, K. E., Williams, C. M., Riemann, L., Bertilsson, S., Alderkamp, A-C., Dinasquet, J. V., Logares, R., Richert, I., Sipler, R. E., Melara, A. J., Mu, L., Newstead, R. G., Post, A. F. & 2 others, , 2016, In: Elementa : Science of the Anthropocene. 4, 36 p., 000140.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Life cycles of the rhizocephalan Boschmaella japonica Deichmann & Høeg, 1990 (Cirripedia: Chthamalophilidae) and its host barnacle Chthamalus challengeri Hoek, 1883 (Cirripedia: Chthamalidae)
Yabuta, M., Høeg, Jens Thorvald, Yamato, S. & Yusa, Y., 2020, In: Journal of Crustacean Biology. 40, 6, p. 825-832 8 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Mountain gorilla genomes reveal the impact of long-term population decline and inbreeding
Xue, Y., Prado-Martinez, J., Sudmant, P. H., Narasimhan, V., Ayub, Q., Szpak, M., Frandsen, P., Chen, Y., Yngvadottir, B., Cooper, D. N., de Manuel, M., Hernandez-Rodriguez, J., Lobon, I., Siegismund, H. R., Pagani, L., Quail, M. A., Hvilsom, C., Mudakikwa, A., Eichler, E. E., Cranfield, M. R. & 3 others, , 2015, In: Science (New York, N.Y.). 348, 6231, p. 242-245 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomes of the rice pest brown planthopper and its endosymbionts reveal complex complementary contributions for host adaptation
Xue, J., Zhou, X., Zhang, C-X., Yu, L-L., Fan, H-W., Wang, Z., Xu, H-J., Xi, Y., Zhu, Z-R., Zhou, W-W., Pan, P-L., Li, B-L., Colbourne, J. K., Noda, H., Suetsugu, Y., Kobayashi, T., Zheng, Y., Liu, S., Zhang, R., Liu, Y. & 21 others, , 2014, In: Genome Biology (Online Edition). 15, 12, 19 p., 521.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genome-wide detection of selection and other evolutionary forces
Xu, Z. & Zhou, R., 2015, Bacterial pangenomics: methods and protocols. Mengoni, A., Galardini, M. & Fondi, M. (eds.). Springer, p. 271-287 17 p. (Methods in Molecular Biology).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Bioinformatic approaches reveal metagenomic characterization of soil microbial community
Xu, Z., Hansen, M. A., Hansen, Lars Hestbjerg, Jacquiod, S. J. A. & Sørensen, Søren Johannes, 2014, In: P L o S One. 9, 4, 11 p., e93445.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Culture-dependent and -independent investigations of microbial diversity on urinary catheters
Xu, Y., Moser, Claus Ernst, Abu Al-Soud, W., Sørensen, Søren Johannes, Høiby, Niels, Nielsen, P. H. & Thomsen, T. R., 2012, In: Journal of Clinical Microbiology. 50, 12, p. 3901-3908 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Embryo genome profiling by single-cell sequencing for preimplantation genetic diagnosis in a β-thalassemia family
Xu, Y., Chen, S., Yin, X., Shen, X., Pan, X., Chen, F., Jiang, H., Liang, Y., Wang, W., Xu, X., Wang, J., Zhang, X., Zhou, C. & Wang, J., 2015, In: Clinical Chemistry. 61, 4, p. 617-626 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Four-decade dynamics of the water color in 61 large lakes on the Yangtze Plain and the impacts of reclaimed aquaculture zones
Xu, Yang, Feng, L., Hou, X., Wang, J. & Tang, Jing, 2021, In: Science of the Total Environment. 781, 14 p., 146688.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Molecular evidence for origin, diversification and ancient gene duplication of plant subtilases (SBTs)
Xu, Y., Wang, S., Li, L., Sahu, S. K., Petersen, Morten, Liu, X., Melkonian, M., Zhang, G. & Liu, Huan, 2019, In: Scientific Reports. 9, 10 p., 12485.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Haplotype-based approach for noninvasive prenatal tests of Duchenne muscular dystrophy using cell-free fetal DNA in maternal plasma
Xu, Y., Li, X., Ge, H-J., Xiao, B., Zhang, Y-Y., Ying, X-M., Pan, X-Y., Wang, L., Xie, W-W., Ni, L., Chen, S-P., Jiang, W-T., Liu, P., Ye, H., Cao, Y., Zhang, J-M., Liu, Y., Yang, Z-J., Chen, Y-W., Chen, F. & 2 others, , 2015, In: Genetics In Medicine. 17, 11, p. 889-896 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Draft Genome of Hariotina reticulata (Sphaeropleales, Chlorophyta) Provides Insight into the Evolution of Scenedesmaceae
Xu, Y., Li, L., Liang, H., Melkonian, B., Lorenz, M., Friedl, T., Petersen, Morten, Liu, Huan, Melkonian, M. & Wang, S., 2019, In: Protist. 170, 6, 6 p., 125684.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes
Xu, X., Liu, X., Ge, S., Jensen, J. D., Hu, F., Li, X., Dong, Y., Gutenkunst, R. N., Fang, L., Huang, L., Li, J., He, W., Zhang, G., Zheng, X., Zhang, F., Li, Y., Yu, C., Kristiansen, K., Zhang, X., Wang, J. & 5 others, , 2012, In: Nature Biotechnology. 30, 1, p. 105-111 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The genomic sequence of the chinese hamster ovary (CHO)-K1 cell line
Xu, X., Nagarajan, H., Lewis, N. E., Pan, S., Cai, Z., Liu, X., Chen, W., Xie, M., Wang, W., Hammond, S., Andersen, M. R., Neff, N., Passarelli, B., Koh, W., Fan, H. C., Wang, J., Gui, Y., Lee, K. H., Betenbaugh, M., Quake, S. R. & 3 others, , 2011, In: Nature Biotechnology. 29, 8, p. 735-741 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Single-cell exome sequencing reveals single-nucleotide mutation characteristics of a kidney tumor: Cell
Xu, X., Hou, Y., Yin, X., Bao, L., Tang, A., Song, L., Li, F., Tsang, S., Wu, K., Wu, H., He, W., Zeng, L., Xing, M., Wu, R., Jiang, H., Liu, X., Cao, D., Guo, G., Hu, X., Gui, Y. & 19 others, , 2012, In: Cell. 148, 5, p. 886-895 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Evolutionary history influences the effects of water-energy dynamics on oak diversity in Asia
Xu, X., Wang, Z., Rahbek, Carsten, Lessard, J. & Fang, J., 2013, In: Journal of Biogeography. 40, 11, p. 2146-2155 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Global beta-diversity of angiosperm trees is shaped by Quaternary climate change
Xu, W. B., Guo, W. Y., Serra-Diaz, J. M., Schrodt, F., Eiserhardt, W. L., Enquist, B. J., Maitner, B. S., Merow, C., Violle, C., Anand, M., Belluau, M., Bruun, H. H., Byun, C., Catford, J. A., Cerabolini, B. E. L., Chacón-Madrigal, E., Ciccarelli, D., Cornelissen, J. H. C., Dang-Le, A. T., de Frutos, A. & 39 others, , 2023, In: Science Advances. 9, 14, 19 p., eadd8553.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deepened snow in combination with summer warming increases growing season nitrous oxide emissions in dry tundra, but not in wet tundra
Xu, W., Frendrup, L. L., Michelsen, Anders, Elberling, Bo & Ambus, Per Lennart, 2023, In: Soil Biology and Biochemistry. 180, 12 p., 109013.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deepened snow enhances gross nitrogen cycling among Pan-Arctic tundra soils during both winter and summer
Xu, W., Priemé, Anders, Cooper, E. J., Mörsdorf, M. A., Semenchuk, P., Elberling, Bo, Grogan, P. & Ambus, Per Lennart, 1 Sep 2021, In: Soil Biology and Biochemistry. 160, 13 p., 108356.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An efficient pipeline for ancient DNA mapping and recovery of endogenous ancient DNA from whole-genome sequencing data
Xu, W., Lin, Y., Zhao, K., Li, H., Tian, Y., Ngatia, J. N., Ma, Y., Sahu, S. K., Guo, H., Guo, X., Xu, Y. C., Liu, Huan, Kristiansen, Karsten, Lan, T. & Zhou, X., 2021, In: Ecology and Evolution. 11, 1, p. 390-401 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Two novel truncating variants of the ASPM gene identified in a nonconsanguineous Chinese family associated with primary microcephaly
Xu, S., Zhang, W., Zhou, R., Huang, H., Chen, W., Xiang, W., Liu, L. & Song, J., 2022, In: Clinical Dysmorphology. 31, 1, p. 1-5 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Discovery of Anti-defense Genes in Archaea
Xu, Shuanshuan, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 117 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Association analysis of the MHC in Lupus nephritis
Xu, R., Li, Q., Liu, R., Shen, J., Li, M., Zhao, M., Wang, M., Liao, Q., Mao, H., Li, Z., Zhou, N., Yin, P., Li, Y., Tang, X., Wu, T., Zhong, Z., Wang, Y., Ai, Z., Wang, O., Chen, N. & 23 others, , Nov 2017, In: Journal of the American Society of Nephrology. 28, 11, p. 3383-3394 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamic evolutionary history and gene content of sex chromosomes across diverse songbirds
Xu, L., Auer, G., Peona, V., Suh, A., Deng, Y., Feng, S., KU, thw266, Blom, M. P. K., Christidis, L., Prost, S., Irestedt, M. & Zhou, Q., 2019, In: Nature Ecology and Evolution. 3, 5, p. 834-844 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomic and microbial factors affect the prognosis of anti-pd-1 immunotherapy in nasopharyngeal carcinoma
Xu, L., Ma, Y., Fang, Chao, Peng, Z., Gao, F., Moll, J. M., Qin, S., Yu, Q., Hou, Y., Kristiansen, Karsten, Fang, W., Brix, S. & Zhang, L., 2022, In: Frontiers in Oncology. 12, 11 p., 953884.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Distinct nutritional and endocrine regulation of prothoracic gland activities underlies divergent life history strategies in Manduca sexta and Drosophila melanogaster
Xu, L. C., Nunes, C., Wang, V. R., Saito, A., Chen, T., Basak, P., Chang, J. J., Koyama, Takashi & Suzuki, Y., 2020, In: Insect Biochemistry and Molecular Biology. 119, 13 p., 103335.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Distinctly different behavioral responses of a copepod, Temora longicornis, to different strains of toxic dinoflagellates, Alexandrium spp.
Xu, J., Hansen, Per Juel, Nielsen, L. T., Krock, B., Tillmann, U. & Kiørboe, T., Feb 2017, In: Harmful Algae. 62, p. 1-9 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transcriptomic Profile of the Mouse Postnatal Liver Development by Single-Nucleus RNA Sequencing
Xu, J., Hao, S., Shi, Q., Deng, Q., Jiang, Y., Guo, P., Yuan, Y., Shi, X., Shangguan, S., Zheng, H., Lai, G., Huang, Y., Wang, Y., Song, Y., Liu, Y., Wu, L., Wang, Z., Cheng, J., Wei, X., Cheng, M. & 6 others, , 2022, In: Frontiers in Cell and Developmental Biology. 10, 11 p., 833392.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A spatiotemporal atlas of mouse liver homeostasis and regeneration
Xu, J., Guo, P., Hao, S., Shangguan, S., Shi, Q., Volpe, G., Huang, K., Zuo, J., An, J., Yuan, Y., Cheng, M., Deng, Q., Zhang, X., Lai, G., Nan, H., Wu, B., Shentu, X., Wu, L., Wei, X., Jiang, Y. & 38 others, , 2024, In: Nature Genetics. 56, p. 953-969 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deep sequencing of 1320 genes reveals the landscape of protein-truncating variants and their contribution to psoriasis in 19,973 Chinese individuals
Xu, H., Zhen, Q., Bai, M., Fang, L., Zhang, Y., Li, B., Ge, H., Moon, S., Chen, W., Fu, W., Xu, Q., Zhou, Y., Yu, Y., Lin, L., Yong, L., Zhang, T., Chen, S., Liu, S., Zhang, H., Chen, R. & 8 others, , 2021, In: Genome Research. 31, 7, p. 1150-1158 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mucosal vaccination with heterologous viral vectored vaccine targeting subdominant SIV accessory antigens strongly inhibits early viral replication
Xu, H., Andersson, A. C., Ragonnaud, Emeline, Boilesen, D., Tolver, Anders, Jensen, Benjamin Anderschou Holbech, Blanchard, J. L., Nicosia, A., Folgori, A., Colloca, S., Cortese, R., Thomsen, Allan Randrup, Christensen, Jan Pravsgaard, Veazey, R. S. & Holst, Peter Johannes, Apr 2017, In: EBioMedicine. 18, p. 204–215 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Application of Next-generation Sequencing Technology in Reproductive/Developmental Sciences and Diagnostics
Xu, F., 2018, Department of Biology, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Survival and Genome Diversity of Vibrio parahaemolyticus Isolated from Edible Aquatic Animals
Xu, D., Peng, Xu, Xie, L. & Chen, L., 2022, In: Diversity. 14, 5, 23 p., 350.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel tRNA Gene Rearrangements in the Mitochondrial Genomes of Poneroid Ants and Phylogenetic Implication of Paraponerinae (Hymenoptera: Formicidae)
Xiong, Z., He, Ding, Guang, X. & Li, Q., 2023, In: Life. 13, 10, 17 p., 2068.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Draft genome of the leopard gecko, Eublepharis macularius
Xiong, Z., Li, F., Li, Q., Zhou, L., Gamble, T., Zheng, J., Kui, L., Li, C., Li, S., Yang, H. & KU, thw266, 2016, In: GigaScience. 5, 6 p., 47.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An esophageal squamous cell carcinoma classification system that reveals potential targets for therapy
Xiong, T., Wang, M., Zhao, J., Liu, Q., Yang, C., Luo, W., Li, X., Yang, H., Kristiansen, Karsten, Roy, B. & Zhou, Y., 25 Jul 2017, In: OncoTarget. 8, 30, p. 49851-49860 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chord: an ensemble machine learning algorithm to identify doublets in single-cell RNA sequencing data
Xiong, K., Zhou, H., Lin, C., Yin, J., Kristiansen, Karsten, Yang, H. & Li, G., 2022, In: Communications Biology . 5, 11 p., 510.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
RED-ML: a novel, effective RNA editing detection method based on machine learning
Xiong, H., Liu, D., Li, Q., Lei, M., Xu, L., Wu, L., Wang, Z., Ren, S., Li, W., Xia, M., Lu, L., Lu, H., Hou, Y., Zhu, S., Liu, X., Sun, Y., Wang, J., Yang, H., Wu, K., Xu, X. & 1 others, , May 2017, In: GigaScience. 6, 5, p. 1-8 8 p., gix012.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Sulfolobus Replication Factor C stimulates the activity of DNA Polymerase B1
Xing, X., Zhang, L., Guo, L., She, Q. & Huang, L., 2014, In: Journal of Bacteriology. 196, 13, p. 2367-2375 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Genetic diversity within lichen photobionts of the Lecanora varia group (Lichenes, Ascomycota)
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Long-term survival of dinoflagellate cysts in anoxic marine sediments.
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Danmarks biodiversitets fremtid: de væsentligste udfordringer og højest prioriterede virkemidler
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DLG1 functions upstream of SDCCAG3 and IFT20 to control ciliary targeting of polycystin-2
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Recommendations for the Organisational Framework for Excellence at UCPH
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