Department of Biology

 

 
  1. Published

    Second-generation PLINK: rising to the challenge of larger and richer datasets

    Chang, C. C., Chow, C. C., Tellier, L. C., Vattikuti, S., Purcell, S. M. & Lee, J. J., 2015, In: GigaScience. 4, 16 p., 7.

    Research output: Contribution to journalJournal articleResearchpeer-review

  2. Published

    On Keelungia pulex nov gen. et nov sp., a heterotrophic euglenoid flagellate that lacks pellicular plates (Euglenophyceae, Euglenida)

    Chan, Y., Moestrup, Øjvind & Chang, J., 2013, In: European Journal of Protistology. 49, 1, p. 15-31 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Strains of the morphospecies Ploeotia costata (Euglenozoa) isolated from the Western North Pacific (Taiwan) reveal substantial genetic differences

    Chan, Y., Chiang, K., Chang, J., Moestrup, Øjvind & Chung, C., 2015, In: Journal of Eukaryotic Microbiology. 62, 3, p. 318-326 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    Flow and coral morphology control coral surface pH: implications for the effects of ocean acidification

    Chan, N. C. S., Wangpraseurt, D., Kühl, Michael & Connolly, S. R., 2016, In: Frontiers in Marine Science. 3, 11 p., 10.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Collecting and processing thoracican, acrothoracican, and rhizocephalan cirripedes

    Chan, B. K. K., Kolbasov, G. A. & Høeg, Jens Thorvald, 2016, In: Journal of Crustacean Biology. 36, 5, p. 752-760 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Five hundred million years to mobility: directed locomotion and its ecological function in a turtle barnacle

    Chan, B. K. K., Wong, Y. H., Robinson, N. J., Lin, J., Yu, S., Dreyer, N., Cheng, I., Høeg, Jens Thorvald & Zardus, J. D., 2021, In: Proceedings of the Royal Society B: Biological Sciences. 288, 1960, 10 p., 20211620.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Cirripede Cypris Antennules: How Much Structural Variation Exists Among Balanomorphan Species from Hard-Bottom Habitats?

    Chan, B. K. K., Sari, A. & Høeg, Jens Thorvald, 2017, In: Biological Bulletin. 233, 2, p. 135-143 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    The evolutionary diversity of barnacles, with an updated classification of fossil and living forms

    Chan, B. K. K., Dreyer, N., Gale, A. S., Glenner, Henrik, Ewers-Saucedo, C., Pérez-Losada, M., Kolbasov, G. A., Crandall, K. A. & Høeg, Jens Thorvald, 2021, In: Zoological Journal of the Linnean Society. 193, 3, p. 789-846 58 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Setal morphology and cirral setation of thoracican barnacle cirri: adaptations and implications for thoracican evolution

    Chan, B. K. K., Garm, Anders Lydik & Høeg, Jens Thorvald, 2008, In: Journal of Zoology. 275, 3, p. 294-306 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Chaetoceros and Rhizosolenia: morphological and molecular studies on two of the most common genera of diatoms in the marine phytoplankton.

    Chamnansinp, A., 2012, Københavns Universitet.

    Research output: Book/ReportPh.D. thesisResearch

  11. Published

    Global diversity of two widespread, colony-forming diatoms of the marine plankton, Chaetoceros socialis (syn. C. radians) and Chaetoceros gelidus sp. nov.

    Chamnansinp, A., Li, Y., Lundholm, Nina & Moestrup, Øjvind, Dec 2013, In: Journal of Phycology. 49, 6, p. 1128-1141 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Diversity in the marine diatom Chaetoceros (Bacillariophyceae) in Thai waters - revisiting Chaetoceros compressus and Chaetoceros contortus

    Chamnansinp, A., Moestrup, Øjvind & Lundholm, Nina, 2015, In: Phycologia. 54, 2, p. 161-175 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    The nightscape of the Arctic winter shapes the diving behavior of a marine predator

    Chambault, P., Teilmann, J., Tervo, O., Sinding, Mikkel Holger Strander & Heide-Jørgensen, M. P., 2024, In: Scientific Reports. 14, 1, 9 p., 3908.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Quantifying nitrogen fixation by heterotrophic bacteria in sinking marine particles

    Chakraborty, S., Andersen, K. H., Visser, A. W., Inomura, K., Follows, M. J. & Riemann, Lasse, 2021, In: Nature Communications. 12, 14 p., 4085.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Core and shell song systems unique to the parrot brain

    Chakraborty, M., Harpøth, S. W., Nedergaard, S., Fridel, E. E., Dabelsteen, Torben, Pakkenberg, B., Bertelsen, Mads Frost, Dorrestein, G. M., Brauth, S. E., Durand, S. E. & Jarvis, E. D., 2015, In: PloS one. 10, 6, 37 p., e0118496.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    The determination of standard metabolic rate in fishes

    Chabot, D., Steffensen, John Fleng & Farrell, A. P., 2016, In: Journal of Fish Biology. 88, 1, p. 81-121 41 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Regulation of telomere metabolism by the RNA processing protein Xrn1

    Cesena, D., Cassani, C., Rizzo, E., Lisby, Michael, Bonetti, D. & Longhese, M. P., 20 Apr 2017, In: Nucleic Acids Research. 45, 7, p. 3860-3874 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Fitting Corrections to an RNA Force Field Using Experimental Data

    Cesari, A., Bottaro, S., Lindorff-Larsen, Kresten, Banás, P., Sponer, J. & Bussi, G., 2019, In: Journal of Chemical Theory and Computation. 15, 6, p. 3425-3431

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Genomic context drives transcription of insertion sequences in the bacterial endosymbiont Wolbachia wVulC

    Cerveau, N., Gilbert, C., Liu, C., Garrett, Roger Antony, Greve, P., Bouchon, D. & Cordaux, R., 2015, In: Gene. 564, 1, p. 81-86 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    Reduced tillage, cover crops and organic amendments affect soil microbiota and improve soil health in Uruguayan vegetable farming systems

    Cerecetto, V., Smalla, K., Nesme, Joseph, Garaycochea, S., Fresia, P., Sørensen, Søren Johannes, Babin, D. & Leoni, C., 2021, In: FEMS Microbiology Ecology. 97, 3, 14 p., fiab023.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    The genomic basis of the plant island syndrome in Darwin’s giant daisies

    Cerca, J., Petersen, B., Lazaro-Guevara, J. M., Rivera-Colón, A., Birkeland, S., Vizueta, J., Li, S., Li, Q., Loureiro, J., Kosawang, C., Díaz, P. J., Rivas-Torres, G., Fernández-Mazuecos, M., Vargas, P., McCauley, R. A., Petersen, G., Santos-Bay, L., Wales, N., Catchen, J. M., Machado, D. & 9 others, Nowak, M. D., Suh, A., Sinha, N. R., Nielsen, Lene Rostgaard, Seberg, Ole, Gilbert, M Thomas P, Leebens-Mack, J. H., Rieseberg, L. H. & Martin, M. D., 2022, In: Nature Communications. 13, 13 p., 3729.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    The Tetragnatha kauaiensis Genome Sheds Light on the Origins of Genomic Novelty in Spiders

    Cerca, J., Armstrong, E. E., Vizueta Moraga, Joel, Fernández, R., Dimitrov, D., Petersen, Bent, Prost, S., Rozas, J., Petrov, D. & Gillespie, R. G., 2021, In: Genome Biology and Evolution. 13, 12, 17 p., evab262.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Multiple paths toward repeated phenotypic evolution in the spiny-leg adaptive radiation (Tetragnatha; Hawai'i)

    Cerca, J., Cotoras, D. D., Santander, Cindy, Bieker, V. C., Hutchins, L., Morin-Lagos, J., Prada, C. F., Kennedy, S., Krehenwinkel, H., Rominger, A. J., Meier, J., Dimitrov, D., Struck, T. H. & Gillespie, R. G., 2023, In: Molecular Ecology. 32, 18, p. 4971-4985 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Gliclazide directly inhibits arginine-induced glucagon release.

    Cejvan, K., Coy, D. H., Holst, Jens Juul, Cerasi, E. & Efendic, S., 2002, In: Diabetes. 51 Suppl 3, p. S381-4

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Organochlorine pollutants in guillemot eggs from the Baltic Sea and northern Atlantic. Polychlorinated dibenzo-p-dioxins, dibenzofurans, bihenyls and pesticides

    Cederberg, T., Storr-Hansen, E., Cleeman, M. & Dyck, J., 1991, In: Dioxin '91. 11th Int. Symp. on chlorinated dioxins and related compounds. p. 352

    Research output: Contribution to journalJournal articleResearch

  26. Published

    Lymph Vessels Associate with Cancer Stem Cells from Initiation to Malignant Stages of Squamous Cell Carcinoma

    Cazzola, Anna, Calzón Lozano, D., Menne, D. H., Dávila Pedrera, R., Liu, J., Peña-Jiménez, D., Fontenete, S., Halin, C. & Perez-Moreno, Mirna, 2023, In: International Journal of Molecular Sciences. 24, 17, 20 p., 13615.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    Energy Pathways in Food Webs of Arctic Ponds

    Cazzanelli, M., 2012, Faculty of Science, University of Copenhagen.

    Research output: Book/ReportPh.D. thesisResearch

  28. Published

    Benthic resources are the key to Daphnia middendorffiana survival in a high arctic pond

    Cazzanelli, M., Forsström, L., Rautio, M., Michelsen, Anders & Christoffersen, Kirsten Seestern, 2012, In: Freshwater Biology. 57, 3, p. 541-551 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Published

    Emergent and floating-leaved macrophytes as refuge for zooplankton in a eutrophic temperate lake without submerged vegetation

    Cazzanelli, M., Perlt, Trine Warming & Christoffersen, Kirsten Seestern, 2008, In: Hydrobiologia. 605, 1, p. 113-122

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    Molecular cloning and functional expression of the first insect FMRFamide receptor

    Cazzamali, G. & Grimmelikhuijzen, Cornelis (Cok), 2002, In: Proceedings of the National Academy of Sciences U.S.A.. 99, 19, p. 12073-12078

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    A new family of insect tyramine receptors.

    Cazzamali, G., Klærke, Dan Arne & Grimmelikhuijzen, Cornelis (Cok), 2005, In: Biochemical and Biophysical Research Communications. 338, 2, p. 1189-96 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    Molecular cloning and functional expression of a Drosophila corazonin receptor

    Cazzamali, G., Saxild, N. P. & Grimmelikhuijzen, Cornelis (Cok), 2002, In: Biochemical and Biophysical Research Communications. 298, 1, p. 31-36

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Published

    Molecular identification of a Drosophila G protein-coupled receptor specific for crustacean cardioactive peptide.

    Cazzamali, G., Hauser, Frank, Kobberup, S., Williamson, M. & Grimmelikhuijzen, Cornelis (Cok), 2003, In: Biochemical and Biophysical Research Communications. 303, 1, p. 146-52 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Published

    The Drosophila gene CG9918 codes for a pyrokinin-1 receptor.

    Cazzamali, G., Torp, M., Hauser, Frank, Williamson, M. & Grimmelikhuijzen, Cornelis (Cok), 2005, In: Biochemical and Biophysical Research Communications. 335, 1, p. 14-9 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  35. Published

    A theory for species co-occurrence in interaction networks

    Cazelles, K., Bastos, M., Mouquet, N. & Gravel, D., 2016, In: Theoretical Ecology. 9, 1, p. 39-48 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published

    Depletion of mucosal substance P in acute otitis media.

    Cayé-Thomasen, Per, Schmidt, P. T., Hermansson, A., Holst, Jens Juul & Thomsen, J., 2004, In: Acta Oto-Laryngologica. 124, 7, p. 794-7 3 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  37. Published

    Conservation genomics of the endangered Seychelles Magpie-Robin (Copsychus sechellarum): a unique insight into the history of a precious endemic bird

    Cavill, Emily Louisa, Gopalakrishnan, Shyam, Puetz, Lara Christine, Ribeiro, Â. M., Mak, Sarah Siu Tze, Rodrigues da Fonseca, Rute Andreia, Antunes Pacheco, George, Dunlop, B., Accouche, W., Shah, N., Zora, A., Calabrese, L., Genner, M., Jones, G., Guo, C., KU, thw266 & Gilbert, M Thomas P, 2022, In: Ibis. 164, 2, p. 396-410 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. Published

    Chemical composition and antioxidant activity of Geranium macrorrhizum in relation to ploidy level and environmental conditions

    Cavar Zeljkovic, S., Siljak-Yakovlev, S., Tan, K. & Maksimovic, M., 2020, In: Plant Systematics and Evolution. 306, 2, 12 p., 18.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    Invertebrate metacommunity structure and dynamics in an andean glacial stream network facing climate change

    Cauvy-Fraunié, S., Espinosa, R., Andino, P., Jacobsen, Dean & Dangles, O., 2015, In: PloS one. 10, 8, 19 p., e0136793.

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Published

    Ecological responses to experimental glacier-runoff reduction in alpine rivers

    Cauvy-Fraunié, S., Andino, P., Espinosa, R., Calvez, R., Jacobsen, Dean & Dangles, O., 2016, In: Nature Communications. 7, 7 p., 12025.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Temporal scaling of high flow effects on benthic fauna: insights from equatorial glacier-fed streams

    Cauvy-Fraunié, S., Andino, P., Espinosa, R., Jacobsen, Dean & Dangles, O., 2015, In: Limnology and Oceanography. 60, 5, p. 1836-1847 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    Relationships between stream macroinvertebrate communities and new flood-based indices of glacial influence

    Cauvy-Fraunie, S., Espinosa, R., Andino, P., Dangles, O. & Jacobsen, Dean, 2014, In: Freshwater Biology. 59, 9, p. 1916-1925 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  43. Published

    Glacial flood pulse effects on benthic fauna in equatorial high-Andean streams

    Cauvy-Fraunie, S., Andino, P., Espinosa, R., Calvez, R., Anthelme, F., Jacobsen, Dean & Dangles, O., 2014, In: Hydrological Processes. 28, 6, p. 3008-3017 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    Technical note: glacial influence in tropical mountain hydrosystems evidenced by the diurnal cycle in water levels

    Cauvy-Fraunie, S., Condom, T., Rabatel, A., Villacis, M., Jacobsen, Dean & Dangles, O., 2013, In: Hydrology and Earth System Sciences. 17, p. 4803-4816 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published

    The impact of human activities on the marine environment quality and health: The EC impacts cluster.

    Caumette, P., Bonin, B., Herbert, R., Widdel, F., Grimalt, J., Guerrero, R., Esteve, I., Kühl, Michael, Cohen, Y. & Muyzer, G., 2002, Role of Microbial Mats in the Biodegradation of oil and hydrocarbons in the Coastal Zones (MATBIOL). p. 201-223

    Research output: Chapter in Book/Report/Conference proceedingReport chapterResearch

  46. Published

    Preface

    Caumette, P., Cohen, Y., Grimalt, J., Herbert, R. & Kühl, Michael, 2004, In: Ophelia. 58, 3, p. 133-134 2 p.

    Research output: Contribution to journalEditorialResearchpeer-review

  47. Published

    Specificity Determinants in the Interaction of Apolipoprotein(a) Kringles with Tetranectin and LDL

    Caterer, N. R., Graversen, J. H., Jacobsen, C., Moestrup, S. K., Sigurskjold, B. W., Etzerodt, M. & Thøgersen, H. C., 2002, In: Biological Chemistry. 383, p. 1743-1750

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Genotoxic and inflammatory effects of nanofibrillated cellulose in murine lungs

    Catalán, J., Rydman, E., Aimonen, K., Hannukainen, K., Suhonen, S., Vanhala, E., Moreno, C., Meyer, V., da Silva Perez, D., Sneck, A., Forsström, U., Højgaard, C., Willemoës, Martin, Winther, J. R., Vogel, U., Wolff, H., Alenius, H., Savolainen, K. M. & Norppa, H., Jan 2017, In: Mutagenesis. 32, 1, p. 23-31 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles

    Castro-Mondragon, J. A., Riudavets-Puig, R., Rauluseviciute, I., Lemma, R. B., Turchi, L., Blanc-Mathieu, R., Lucas, J., Boddie, P., Khan, A., Perez, N. M., Fornes, O., Leung, T. Y., Aguirre, A., Hammal, F., Schmelter, D., Baranasic, D., Ballester, B., Sandelin, A., Lenhard, B., Vandepoele, K. & 3 others, Wasserman, W. W., Parcy, F. & Mathelier, A., 2022, In: Nucleic acids symposium series. 50, D1, p. D165-D173 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published

    Optimizing protocols for extraction of bacteriophages prior to metagenomic analyses of phage communities in the human gut

    Castro Mejia, J. L., Muhammed, Musemma Kedir, Kot, Witold, Neve, H., Franz, C. M. A. P., Hansen, L. H., Vogensen, Finn Kvist & Nielsen, Dennis Sandris, 2015, In: Microbiome. 3, 14 p., 64.

    Research output: Contribution to journalJournal articleResearchpeer-review