Department of Biology

 

 
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  1. Published

    Transcriptional repression of the yeast CHA1 gene requires the chromatin-remodeling complex RSC

    Moreira, José & Holmberg, Steen, 1999, In: E M B O Journal. 18, 10, p. 2836-44 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Transcriptional regulatory program in wild-type and retinoblastoma gene-deficient mouse embryonic fibroblasts during adipocyte differentiation

    Hakim-Weber, R., Krogsdam, A., Jørgensen, C., Fischer, M., Prokesch, A., Bogner-Strauss, J. G., Bornstein, S. R., Hansen, Jacob B., Madsen, L., Kristiansen, Karsten, Trajanoski, Z. & Hackl, H., 2011, In: BMC Research Notes. 4, p. 1-13 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Transcriptional regulator-mediated activation of adaptation genes triggers CRISPR de novo spacer acquisition

    Liu, T., Li, Y., Wang, X., Ye, Q., Li, H., Liang, Y., She, Q. & Peng, N., 30 Jan 2015, In: Nucleic Acids Research. 43, 2, p. 1044-1055 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Transcriptional regulation of pyruvate dehydrogenase kinase 4 in skeletal muscle during and after exercise

    Pilegaard, Henriette & Neufer, P. D., 2004, In: roceedings of the Nutrition Society. 63, p. 221-226

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Transcriptional regulation of gene expression in human skeletal muscle during recovery from exercise

    Pilegaard, Henriette, Ordway, G. A., Saltin, B. & Neufer, P. D., 2000, In: American Journal of Physiology: Endocrinology and Metabolism. 279, p. E806-E814

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Transcriptional regulation of gene expression clusters in motor neurons following spinal cord injury

    Ryge, J., Winther, Ole, Wienecke, Jacob, Sandelin, Albin Gustav, Westerdahl, A., Hultborn, Hans & Kiehn, O., 2010, In: BMC Genomics. 11, 1, p. 365 22 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Transcriptional regulation by an NAC (NAM-ATAF1,2-CUC2) transcription factor attenuates ABA signalling for efficient basal defence towards Blumeria graminis f. sp. hordei in Arabidopsis

    Jensen, M. K., Hagedorn, P. H., de Torres-Zabala, M., Grant, M. R., Rung, J. H., Collinge, David B. & Lyngkjær, M. F., 2008, In: Plant Journal. 56, 6, p. 867-880 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Transcriptional profiling of the human fibrillin/LTBP gene family, key regulators of mesenchymal cell functions

    Davis, M. R., Andersson, Robin, Severin, J., de Hoon, M., Bertin, N., Baillie, J. K., Kawaji, H., Sandelin, Albin Gustav, Forrest, A. R. R. & Summers, K. M., 2014, In: Molecular Genetics and Metabolism. 112, 3, p. 73-83 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Transcriptional profiling of lupin during seed filling in an attempt to identify GTs with roles in pectic RG-I biosynthesis

    Borkhardt, B., Bendixen, C., Panitz, F., Asp, T., Øbro, J., Jørgensen, B., Harholt, J. & Ulvskov, P., 2008.

    Research output: Contribution to conference › Conference abstract for conference › Research

  10. Published

    Transcriptional profiling of lupin druing seed filling in an attempt to identify GTs with roles in pectic RG-I biosynthesis

    Borkhardt, B., Bendixen, C., Panitz, F., Asp, T., Øbro, J., Jørgensen, B., Harholt, J. & Ulvskov, P., 2008.

    Research output: Contribution to conference › Poster › Research

  11. Published

    Transcriptional profiling of extracellular amino acid sensing in Saccharomyces cerevisiae and the role of Stp 1 p and Stp2p

    Eckert-Boulet, N., Nielsen, P. S., Friis, Carsten, Moreira dos Santos, M., Nielsen, J., Kielland-Brandt, M. C. & Regenberg, Birgitte, 1 Jun 2004, In: Yeast. 21, 8, p. 635-648 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Transcriptional profiling of Medicago truncatula roots after infection with Aphanomyces euteiches (oomycota) identifies novel genes upregulated during this pathogenic interaction

    Nyamsuren, O., Colditz, F., Rosendahl, Søren, Tamasloukht, M., Bekel, T., Meyer, F., Kuester, H. & Franken, P., 2003, In: Physiological and Molecular Plant Pathology. 63, p. 17-26

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Transcriptional dynamics during human adipogenesis and its link to adipose morphology and distribution

    Ehrlund, A., Mejhert, N., Björk, C., Andersson, Robin, Kulyté, A., Åström, G., Itoh, M., Kawaji, H., Lassmann, T., Daub, C. O., Carninci, P., Forrest, A. R. R., Hayashizaki, Y., Sandelin, Albin Gustav, Ingelsson, E., FANTOM Consortium, Rydén, M., Laurencikiene, J., Arner, P. & Arner, E., 2017, In: Diabetes. 66, 1, p. 218-230 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Transcriptional diversity and regulation across time and states

    Vitting-Seerup, K., 2016, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  15. Published

    Transcriptional decomposition reveals active chromatin architectures and cell specific regulatory interactions

    Rennie, Sarah, Dalby, M., van Duin, Lucas & Andersson, Robin, 2018, In: Nature Communications. 9, 16 p., 487.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Transcriptional control of steroid biosynthesis genes in the Drosophila prothoracic gland by Ventral veins lacking and Knirps

    Danielsen, E. T., Møller, M. E., Dorry, E., Komura-Kawa, T., Fujimoto, Y., Troelsen, J., Herder, R., O'Connor, M. B., Niwa, R. & Rewitz, Kim, 2014, In: P L o S Genetics. 10, 6, 15 p., e1004343.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Transcriptional changes induced by bevacizumab combination therapy in responding and non-responding recurrent glioblastoma patients

    Urup, T., Staunstrup, L. M., Michaelsen, Signe Regner, Vitting-Seerup, K., Bennedbæk, M., Toft, A., Olsen, L. R., Jønson, L., Issazadeh-Navikas, Shohreh, Broholm, H., Hamerlik, P., Poulsen, H. S. & Lassen, Ulrik Niels, 18 Apr 2017, In: BMC Cancer. 17, 10 p., 278.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Transcriptional and epigenomic profiling identifies YAP signaling as a key regulator of intestinal epithelium maturation

    Pikkupeura, Laura Maarit, Bardini Bressan, Raul, Guiu, J., Chen, Y., Maimets, Martti, Mayer, Daniela, Schweiger, P. J., Hansen, Stine Lind, Maciag, Grzegorz Jerzy, Larsen, Hjalte List, Lõhmussaar, Kadi, Pedersen, M. T., Teves, Joji Marie Yap, Lange, Jette Bornholdt, Benes, V., Sandelin, Albin Gustav & Jensen, Kim Bak, 2023, In: Science Advances. 9, 28, 16 p., eadf9460.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Transcriptional Profiles Reveal Deregulation of Lipid Metabolism and Inflammatory Pathways in Neurons Exposed to Palmitic Acid

    Flores-León, M., Alcaraz, N., Pérez-Domínguez, M., Torres-Arciga, K., Rebollar-Vega, R., De la Rosa-Velázquez, I. A., Arriaga-Canon, C., Herrera, L. A., Arias, C. & González-Barrios, R., 2021, In: Molecular Neurobiology. 58, 9, p. 4639-4651 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Transcriptional Analysis of the Genetic Element pSSVx: Differential and Temporal Regulation of Gene Expression Reveals Correlation between Transcription and Replication

    Contursi, P., Cannio, R., Prato, S., She, Q., Rossi, M. & Bartolucci, S., 2007, In: Journal of Bacteriology. 189, 17, p. 6339-50 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Transcription-replication conflicts at chromosomal fragile sites—consequences in M phase and beyond

    Østergaard, Vibe Hallundbæk & Lisby, Michael, Mar 2017, In: Chromosoma. 126, 2, p. 213-222 10 p.

    Research output: Contribution to journal › Review › Research › peer-review

  22. Published

    Transcription termination in the plasmid/virus hybrid pSSVx from Sulfolobus islandicus

    Contursi, P., Cannio, R. & She, Q., 1 Sep 2010, In: Extremophiles. 14, 5, p. 453-63 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Transcription start site analysis reveals widespread divergent transcription in D. melanogaster and core promoter-encoded enhancer activities

    Rennie, Sarah, Dalby, M., Lloret-Llinares, M., Bakoulis, Stylianos, Dalager Vaagensø, C., Jensen, T. H. & Andersson, Robin, 2018, In: Nucleic Acids Research. 46, 11, p. 5455-5469 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Transcription of the Alginate Operon in Pseudomonas aeruginosa Is Regulated by c-di-GMP

    Liang, Z., Rybtke, Morten Levin, Kragh, K. N., Johnson, O., Schicketanz, Muriel Leandra, Zhang, Yong, Andersen, Jens Bo & Tolker-Nielsen, Tim, 2022, In: Microbiology Spectrum. 10, 4, 13 p., e00675-22.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Transcription initiation of distant core promoters in a large-sized genome of an insect

    Liu, Q., Jiang, F., Zhang, J., Li, X. & Kang, L., 2021, In: BMC Biology. 19, 21 p., 62.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Transcription factor-driven coordination of cell cycle exit and lineage-specification in vivo during granulocytic differentiation: In memoriam Professor Niels Borregaard

    Theilgaard-Mønch, Kim, Pundhir, Sachin, Reckzeh, K., Su, Jinyu, Tapia, Marta Cecylia, Furtwängler, Benjamin, Jendholm, J., Jakobsen, J. S., Hasemann, M. S., Knudsen, K. J., Cowland, J. B., Fossum, A., Schoof, E., Schuster, Mikkel Bruhn & Porse, Bo Torben, 2022, In: Nature Communications. 13, 1, 17 p., 3595.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Transcription factor expression is the main determinant of variability in gene co-activity

    van Duin, Lucas, Krautz, Robert, Rennie, Sarah & Andersson, Robin, 2022, 30 p.

    Research output: Working paper › Preprint › Research

  28. Published

    Transcription factor expression is the main determinant of variability in gene co-activity

    van Duin, Lucas, Krautz, Robert, Rennie, Sarah & Andersson, Robin, 2023, In: Molecular Systems Biology. 19, 7, 17 p., e11392.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Transcription factor AP-2γ is a developmentally regulated marker of testicular carcinoma in situ and germ cell tumors

    Høi-Hansen, Christina Engel, Nielsen, J. E., Almstrup, Kristian, Sonne, Si Brask, Graem, N., Skakkebæk, Niels Erik, Leffers, H. & Rajpert-De Meyts, E., 2004, In: Clinical Cancer Research.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Transcription factor AP-2gamma is a developmentally regulated marker of testicular carcinoma in situ and germ cell tumors

    Hoei-Hansen, C. E., Nielsen, J. E., Almstrup, K., Sonne, Si Brask, Graem, N., Skakkebæk, Niels Erik, Leffers, H. & Rajpert-De Meyts, E., 2004, In: Clinical Cancer Research. 10, 24, p. 8521-30 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells

    Arner, E., Daub, C. O., Vitting-Seerup, K., Andersson, R., Lilje, B., Drabløs, F., Lennartsson, A., Rönnerblad, M., Hrydziuszko, O., Vitezic, M., Freeman, T. C., Alhendi, A. M. N., Arner, P., Axton, R., Baillie, J. K., Beckhouse, A., Bodega, B., Briggs, J., Brombacher, F., Davis, M. & 89 others, Detmar, M., Ehrlund, A., Endoh, M., Eslami, A., Fagiolini, M., Fairbairn, L., Faulkner, G. J., Ferrai, C., Fisher, M. E., Forrester, L., Goldowitz, D., Guler, R., Ha, T., Hara, M., Herlyn, M., Ikawa, T., Kai, C., Kawamoto, H., Khachigian, L. M., Klinken, S. P., Kojima, S., Koseki, H., Klein, S., Mejhert, N., Miyaguchi, K., Mizuno, Y., Morimoto, M., Morris, K. J., Mummery, C., Nakachi, Y., Ogishima, S., Okada-Hatakeyama, M., Okazaki, Y., Orlando, V., Ovchinnikov, D., Passier, R., Patrikakis, M., Pombo, A., Qin, X., Roy, S., Sato, H., Savvi, S., Saxena, A., Schwegmann, A., Sugiyama, D., Swoboda, R., Tanaka, H., Tomoiu, A., Winteringham, L. N., Wolvetang, E., Yanagi-Mizuochi, C., Yoneda, M., Zabierowski, S., Zhang, P., Abugessaisa, I., Bertin, N., Diehl, A. D., Fukuda, S., Furuno, M., Harshbarger, J., Hasegawa, A., Hori, F., Ishikawa-Kato, S., Ishizu, Y., Itoh, M., Kawashima, T., Kojima, M., Kondo, N., Lizio, M., Meehan, T. F., Mungall, C. J., Murata, M., Nishiyori-Sueki, H., Sahin, S., Nagao-Sato, S., Severin, J., de Hoon, M. J. L., Kawai, J., Kasukawa, T., Lassmann, T., Suzuki, H., Kawaji, H., Summers, K. M., Wells, C., Hume, D. A., Forrest, A. R. R., Sandelin, Albin Gustav, Carninci, P. & Hayashizaki, Y., 2015, In: Science (New York, N.Y.). 347, 6225, p. 1010-1014 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Transcellular sodium transport in cultured cystic fibrosis human nasal epithelium

    Willumsen, N. J. & Boucher, R. C., 1991, In: American Journal of Physiology: Cell Physiology. 261, 2, p. C332-C341

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Trans-kingdom interactions in mixed biofilm communities

    Sadiq, F. A., Hansen, Mads Frederik, Burmølle, Mette, Heyndrickx, M., Flint, S., Lu, W., Chen, W. & Zhang, H., 2022, In: F E M S Microbiology Reviews. 46, 5, 20 p., fuac024.

    Research output: Contribution to journal › Review › Research › peer-review

  34. Published

    Trans- and Within-Generational Developmental Plasticity May Benefit the Prey but Not Its Predator during Heat Waves

    Walzer, A., Nachman, Gøsta Støger, Spangl, B., Stijak, M. & Tscholl, T., Aug 2022, In: Biology. 11, 8, 20 p., 1123.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    TrancriptomeReconstructoR: data-driven annotation of complex transcriptomes

    Ivanov, M., Sandelin, Albin Gustav & Marquardt, Sebastian, 2021, In: BMC Bioinformatics. 22, 15 p., 290.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Traits related to species persistence and dispersal explain changes in plant communities subjected to habitat loss

    Marini, L., Bruun, Hans Henrik, Heikkinen, R., Helm, A., Honnay, O., Krauss, J., Kühn, I., Lindborg, R., Pärtel, M. & Bommarco, R., 2012, In: Diversity and Distributions. 18, 9, p. 898-908 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Training state and skeletal muscle autophagy in response to 36 h of fasting

    Dethlefsen, M. M., Bertholdt, L., Gudiksen, Anders, Stankiewicz, T., Bangsbo, Jens, van Hall, Gerrit, Plomgaard, Peter Stendahl & Pilegaard, Henriette, Nov 2018, In: Journal of Applied Physiology. 125, 5, p. 1609-1619 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Training state and fasting-induced PDH regulation in human skeletal muscle

    Gudiksen, Anders, Bertholdt, L., Stankiewicz, T., Villesen, I., Bangsbo, Jens, Plomgaard, Peter Stendahl & Pilegaard, Henriette, 2018, In: Pflügers Archiv - European Journal of Physiology. 470, 11, p. 1633-1645 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Training and lactate transport in rat skeletal muscle

    Pilegaard, H. & Juel, C., 1992, In: Acta Physiologica (Print Edition). 146, p. C4.2

    Research output: Contribution to journal › Journal article › Research

  40. Published

    Training HMM structure with genetic algorithm for biological sequence analysis

    Won, K. J. & Krogh, Anders, 2004, In: Bioinformatics. Vol. 20 (18), p. 3613-9

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Trailer-loading of horses: is there a difference between positive and negative reinforcement concerning effectiveness and stress-related signs?

    Hendriksen, P., Elmgreen, K. & Ladewig, Jan, 2011, In: Journal of Veterinary Behavior. 6, 5, p. 261-266 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Trafficking, localization and degradation of the Na+,HCO3- Co-transporter NBCn1 in kidney and breast epithelial cells

    Olesen, C. W., Vogensen, J., Axholm, I., Severin, M., Schnipper, J., Pedersen, I. S., von Stemann, J. H., Schrøder, J. M., Christensen, D. P. & Pedersen, Stine Helene Falsig, 2018, In: Scientific Reports. 8, p. 1-16 7435.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Trafficking of Na,K-ATPase Fused to Enhanced Green Fluorescent Protein Is Mediated by Protein Kinase A or C

    Kristensen, B., Birkelund, S. & Jorgensen, P. L., 2003, In: Journal of Membrane Biology. 2003 191, p. 25-36

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Traditional plant functional groups explain variation in economic but not size-related traits across the tundra biome

    Thomas, H. J. D., Myers-Smith, I. H., Bjorkman, A. D., Elmendorf, S. C., Blok, D., Cornelissen, J. H. C., Forbes, B. C., Hollister, R. D., Normand, S., Prevéy, J. S., Rixen, C., Schaepman-Strub, G., Wilmking, M., Wipf, S., Cornwell, W. K., Kattge, J., Goetz, S. J., Guay, K. C., Alatalo, J. M., Anadon-Rosell, A. & 69 others, Angers-Blondin, S., Berner, L. T., Björk, R. G., Buchwal, A., Buras, A., Carbognani, M., Christie, K., Collier, L. S., Cooper, E. J., Eskelinen, A., Frei, E. R., Grau, O., Grogan, P., Hallinger, M., Heijmans, M. M. P. D., Hermanutz, L., Hudson, J. M. G., Hülber, K., Iturrate-Garcia, M., Iversen, C. M., Jaroszynska, F., Johnstone, J. F., Kaarlejärvi, E., Kulonen, A., Lamarque, L. J., Lévesque, E., Little, C. J., Michelsen, Anders, Milbau, A., Nabe-Nielsen, J., Nielsen, S. S., Ninot, J. M., Oberbauer, S. F., Olofsson, J., Onipchenko, V. G., Petraglia, A., Rumpf, S. B., Semenchuk, P. R., Soudzilovskaia, N. A., Spasojevic, M. J., Speed, J. D. M., Tape, K. D., te Beest, M., Tomaselli, M., Trant, A., Treier, U. A., Venn, S., Vowles, T., Weijers, S., Zamin, T., Atkin, O. K., Bahn, M., Blonder, B., Campetella, G., Cerabolini, B. E. L., Chapin, F. S., Dainese, M., de Vries, F. T., Díaz, S., Green, W., Jackson, R. B., Manning, P., Niinemets, Ü., Ozinga, W. A., Peñuelas, J., Reich, P. B., Schamp, B., Sheremetev, S. & van Bodegom, P. M., 2019, In: Global Ecology and Biogeography. 28, 2, p. 78-95

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Tradescantia micronucleus test indicates genotoxic potential of traffic emissions in European cities.

    Klumpp, A., Ansel, W., Klumpp, G., Calatayud, V., Garrec, J. P., He, S., Penuelas, J., Ribas, A., Ro-Poulsen, Helge, Rasmussen, S., Sanz, M. J. & Vergne, P., 2006, In: Environmental Pollution. 139, 3, p. 515-522

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Tradeoffs, competition, and coexistence in eastern deciduous forest ant communities

    Stuble, K. L., Rodriguez-Cabal, M. A., McCormick, G. L., Jurić, I., Dunn, R. R. & Sanders, N., Apr 2013, In: Oecologia. 171, 4, p. 981-992 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Trade-offs in group living: transmission and disease resistance in leaf-cutting ants

    Hughes, W. O. H., Eilenberg, J. & Boomsma, Jacobus J., 2002, In: Proceedings of the Royal Society of London. Biological Sciences. B. 269, p. 1811-1819

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Tracking the origins of Yakutian horses and the genetic basis for their fast adaptation to subarctic environments

    Sanz, P. L., Der Sarkissian, C., Ermini, L., Schubert, M., Jónsson, H., Albrechtsen, A., Fumagalli, M., Yang, M. A., Gamba, C., Seguin-Orlando, A., Mortensen, C. D., Petersen, B., Hoover, C. A., Lorente-Galdos, B., Nedoluzhko, A., Boulygina, E., Tsygankova, S., Neuditschko, M., Jagannathan, V., Theves, C. & 20 others, Alfarhan, A. H., Alquraishi, S. A., Al-Rasheid, K. A. S., Sicheritz-Pontén, T., Popov, R., Grigoriev, S., Alekseev, A. N., Rubin, E. M., McCue, M., Rieder, S., Leeb, T., Tikhonov, A., Crubézy, E., Slatkin, M., Marques-Bonet, T., Nielsen, R., Willerslev, Eske, Kantanen, J., Prokhortchouk, E. & Orlando, L. A. A., 2015, In: Proceedings of the National Academy of Sciences of the United States of America. 112, 50, p. E6889-E6897 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Tracking the narrow roads of gene land

    Boomsma, Jacobus J., 2020, In: Insectes Sociaux. 67, 1, p. 7-10 4 p.

    Research output: Contribution to journal › Editorial › Research › peer-review

  50. Published

    Tracking down human contamination in ancient human teeth.

    Sampietro, M. L., Gilbert, M Thomas P, Lao, O., Caramelli, D., Lari, M., Bertranpetit, J. & Lalueza-Fox, C., 2006, In: Molecular Biology and Evolution. 23, 9, p. 1801-7 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Tracking dehydration mechanisms in crystalline hydrates with molecular dynamics simulations

    Larsen, A. S., Ruggiero, M. T., Johansson, Kristoffer Enøe, Zeitler, J. A. & Rantanen, Jukka, Oct 2017, In: Crystal Growth & Design. 17, 10, p. 5017-5022 6 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  52. Published

    Tracking changes in dinoflagellate community structure through time: an example from Mariager Fjord, Denmark, linked to eutrophication. Programme and abstracts, 11th international conference on harmful lagae blooms, Cape Town, South Africa

    Ellegaard, Marianne, 2004.

    Research output: Contribution to conference › Conference abstract for conference › Research

  53. Published

    Tracing water mass mixing in the Baltic-North Sea transition zone using the optical properties of coloured dissolved organic matter

    Stedmon, C. A., Osburn, C. L. & Kragh, T., 2010, In: Estuarine, Coastal and Shelf Science. 87, 1, p. 156-162 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Tracing the long-term microbial production of recalcitrant fluorescent dissolved organic matter in seawater

    Jørgensen, L., Stedmon, C. A., Granskog, M. A. & Middelboe, Mathias, 2014, In: Geophysical Research Letters. 41, 7, p. 2481-2488 8 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  55. Published

    Tracing the genetic footprints of vertebrate landing in non-teleost ray-finned fishes

    Bi, X., Wang, K., Yang, L., Pan, H., Jiang, H., Wei, Q., Fang, M., Yu, H., Zhu, C., Cai, Y., He, Y., Gan, X., Zeng, H., Yu, D., Zhu, Y., Jiang, H., Qiu, Q., Yang, H., Zhang, Y. E., Wang, W. & 3 others, Zhu, M., He, S. & KU, thw266, 2021, In: Cell. 184, 5, p. 1377-1391, e1-e14

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    Tracing the evolutionary origins of insect renal function

    Halberg, Kenneth Veland, Terhzaz, S., Cabrero, P., Davies, S. A. & Dow, J. A. T., 2015, In: Nature Communications. 6, 10 p., 6800.

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    Tracing the Spatial Distribution of Whole-Lake Exchange of Groundwater and Lake Water in Low-Hydraulic Gradient Systems Using delta O-18 and Electrical Conductivity and Uncertain End-Member Mixing Analysis

    Engesgaard, P., Solvang, I. S., Steiness, M., Kristensen, E., Kragh, T. & Duque, C., 2020, In: Water. 12, 6, 18 p., 1608.

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. Published

    Tracing in situ amino acid uptake in plants and microbes with15N13C labelled compounds

    Andresen, L. C., Michelsen, Anders, Jonasson, S. E. & Ström, L., 2006.

    Research output: Contribution to conference › Poster › Research

  59. Published

    Trace gas exchange in a high-arctic valley, 1, Variations in CO2 and CH4 flux between tundra vegetation types

    Christensen, T. R., Friborg, Thomas, Sommerkorn, M., Kaplan, J., Illeris, L., Søgaard, H., Nordstrøm, C. & Jonasson, S. E., 2000, In: Global Biogeochemical Cycles. 14, 3, p. 701-713

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    Trace gas exchange in a high-arctic valley 1: Variations in CO2 and CH4 flux between tundra vegetation types

    Christensen, T. R., Friborg, T., Sommerkorn, M., Kaplan, J., Illeris, L., Soegaard, H., Nordstroem, C. & Jonasson, S. E., 2000, In: Global Biogeochemical Cycles. 14, p. 701-713

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Toxins, Targets, and Triggers: An Overview of Toxin-Antitoxin Biology

    Harms, A., Brodersen, D. E., Mitarai, Namiko & Gerdes, K., 7 Jun 2018, In: Molecular Cell. 70, 5, p. 768-784 17 p.

    Research output: Contribution to journal › Review › Research › peer-review

  62. Published

    Toxin-mediated feeding in the harmful alga Prymnesium parvum

    Skovgaard, A. & Hansen, Per Juel, 2002.

    Research output: Contribution to conference › Conference abstract for conference › Research

  63. Published

    Toxin-antitoxin operon kacAT of Klebsiella pneumoniae is regulated by conditional cooperativity via a W-shaped KacA-KacT complex

    Qian, H., Yu, H., Li, P., Zhu, E., Yao, Q., Tai, C., Deng, Z., Gerdes, K., He, X., Gan, J. & Ou, H., 2019, In: Nucleic Acids Research. 47, 14, p. 7690-7702

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    Toxin production in Dinophysis and the fate of these toxins in marine mussels

    Nielsen, L. T., 2012, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  65. Published

    Toxin production and temperature-induced morphological variation of the diatom Pseudo-nitzschia seriata from the Arctic

    Hansen, L. R., Soylu, S. Í., Kotaki, Y., Moestrup, Øjvind & Lundholm, Nina, 2011, In: Harmful Algae. 10, 6, p. 689-696 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    Toxin inhibition in C. crescentus VapBC1 is mediated by a flexible pseudo-palindromic protein motif and modulated by DNA binding

    Bendtsen, K. L., Xu, K., Luckmann, M., Winther, K. S., Shah, S. A., Pedersen, C. N. S. & Brodersen, D. E., 2017, In: Nucleic Acids Research. 45, 5, p. 2875-2886 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    Toxin Neutralization Using Alternative Binding Proteins

    Jenkins, T. P., Fryer, T., Dehli, R. I., Jürgensen, J. A., Fuglsang-Madsen, A., Føns, S. & Laustsen, A. H., 2019, In: Toxins. 11, 1

    Research output: Contribution to journal › Review › Research › peer-review

  68. Published

    Toxicity tests in eight species of Chrysochromulina (Haptophyta)

    Simonsen, S. & Moestrup, Øjvind, 1997, In: Canadian Journal of Botany. p. 129-136

    Research output: Contribution to journal › Journal article › Research

  69. Published

    Toxicity of pesticides to Enchytraeus bigeminus

    Christensen, B. & Jensen, L. O., 1995, In: Bekaempelsesmiddelforskning fra Miljoestyrelsen. Nr 8, p. 33-38

    Research output: Contribution to journal › Journal article › Research

  70. Published

    Toxicity of cadmium and zinc to small soil protists

    Johansen, Jesper Liengaard, Rønn, Regin & Ekelund, Flemming, 2018, In: Environmental Pollution. 242, part B, p. 1510-1517

    Research output: Contribution to journal › Journal article › Research › peer-review

  71. Published

    Toxic mucus traps: a novel mechanism that mediates prey uptake in the mixotrophic dinoflagellate Alexandrium pseudogonyaulax

    Blossom, H. E., Daugbjerg, Niels & Hansen, Per Juel, 2012, In: Harmful Algae. 17, p. 40-53 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    Toxic marine epibenthic dinoflagellates from Malaysia - a survey based on light and scanning electron microscopy.

    Mohammad-Noor, N., Daugbjerg, Niels & Moestrup, Øjvind, 2004. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  73. Published

    Toxic cyanobacteria in New Zealand lakes and toxicity to indigenous zooplankton

    Christoffersen, Kirsten Seestern & Burns, C. W., 2000, In: Verhandlungen / Internationale Vereinigung für Theoretische und Angewandte Limnologie. 27, 5, p. 3222-3225

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    Toxic blue-green algae (cyanobacteria) in 1833

    Moestrup, Øjvind, 1997, In: Phycologia. 35, 6 Supplement, p. 5

    Research output: Contribution to journal › Journal article › Research

  75. Published

    Toxic algae: toxicity of Chrysochromulina with new ultrastructural information on C. polylepis

    Throndsen, J., Larsen, J. & Moestrup, Øjvind, 1995, Algae, Environment and Human Affairs. Bristol, England, p. 201-222

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  76. Published

    Towards transferable functions for extraction of non-timber forest products: a case study on charcoal production in Tanzania

    Schaafsma, M., Morse-Jones, S., Posen, P., Swetnam, R. D., Balmford, A., Bateman, I. J., Burgess, N. D., Chamshama, S. A. O., Fisher, B., Green, R. E., Hepelwa, A. S., Hernándes-Sirvent, A., Kajembe, G. C., Kulindwa, K., Lund, J. F., Mbwambo, L., Meilby, H., Ngaga, Y. M., Theilade, I., Treue, T. & 2 others, Vyamana, V. G. & Turner, R. K., 2012, In: Ecological Economics. 80, p. 48-62 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    Towards the extended barcode concept: Generating DNA reference data through genome skimming of danish plants

    Chua, Physilia, Leerhøi, Frederik, Arfaoui, Emilia Marie Rolander, Margaryan, Ashot, Noer, Christina, Richter, S. R., Restrup, M. E., Bruun, Hans Henrik, Hartvig, Ida, Coissac, E., Boessenkool, S., Alsos, I. G. & Bohmann, Kristine, 2021, 38 p. (bioRxiv).

    Research output: Working paper › Preprint › Research

  78. Published

    Towards standardization of the description and publication of next-generation sequencing datasets of fungal communities

    Henrik Nilsson, R., Tedersoo, L., Lindahl, B. D., Kjøller, Rasmus, Carlsen, T., Quince, C., Abarenkov, K., Pennanen, T., Stenlid, J., Bruns, T., Larsson, K., Kõljalg, U. & Kauserud, H., 2011, In: New Phytologist. 191, 2, p. 314-8 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Published

    Towards routine chromosome-scale haplotype-resolved reconstruction in cancer genomics

    Garg, S., 2023, In: Nature Communications. 14, 1, 11 p., 1358.

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    Towards reconstructing the ancestral brain gene-network regulating caste differentiation in ants

    Qiu, Bitao, Larsen, Rasmus Stenbak, Chang, N., Wang, J., Boomsma, Jacobus J. & KU, thw266, 2018, In: Nature Ecology & Evolution. 2, 11, p. 1782-1791

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    Towards operational payments for water ecosystem services in Tanzania: a case study from the Uluguru Mountains

    Lopa, D., Mwanyoka, I., Jambiya, G., Massoud, T., Harrison, P., Ellis-Jones, M., Blomley, T., Leimona, B., van Noordwijk, M. & Burgess, Neil David, 2012, In: Oryx. 46, 01, p. 34-44 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    Towards monitoring of protein purification by matrix-assisted laser desorption ionization mass spectrometry

    Jensen, C., Haebel, S., Andersen, S. O. & Roepstorff, P., 1997, In: Int. J. Mass Spectromitry and Ion Processes. 160, p. 339-356

    Research output: Contribution to journal › Journal article › Research

  83. Published

    Towards in silico CLIP-seq: predicting protein-RNA interaction via sequence-to-signal learning

    Horlacher, M., Wagner, N., Moyon, L., Kuret, K., Goedert, N., Salvatore, Marco, Ule, J., Gagneur, J., Winther, Ole & Marsico, A., 2023, In: Genome Biology. 24, 1, 37 p., 180.

    Research output: Contribution to journal › Journal article › Research › peer-review

  84. Published

    Towards global patterns in the diversity and community structure of ectomycorrhizal fungi

    Tedersoo, L., Bahram, M., Toots, M., Dédhiou, A. G., Henkel, T. W., Kjøller, Rasmus, Morris, M. H., Nara, K., Nouhra, E., Peay, K. G., Põlme, S., Ryberg, M., SMITH, M. E. & Kõljalg, U., 2012, In: Molecular Ecology Resources. 21, 17, p. 4160-4170 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    Towards complete and error-free genome assemblies of all vertebrate species

    Rhie, A., McCarthy, S. A., Fedrigo, O., Damas, J., Formenti, G., Koren, S., Uliano-Silva, M., Chow, W., Fungtammasan, A., Kim, J., Lee, C., Ko, B. J., Chaisson, M., Gedman, G. L., Cantin, L. J., Thibaud-Nissen, F., Haggerty, L., Bista, I., Smith, M., Haase, B. & 107 others, Mountcastle, J., Winkler, S., Paez, S., Howard, J., Vernes, S. C., Lama, T. M., Grutzner, F., Warren, W. C., Balakrishnan, C. N., Burt, D., George, J. M., Biegler, M. T., Iorns, D., Digby, A., Eason, D., Robertson, B., Edwards, T., Wilkinson, M., Turner, G., Meyer, A., Kautt, A. F., Franchini, P., Detrich, H. W., Svardal, H., Wagner, M., Naylor, G. J. P., Pippel, M., Malinsky, M., Mooney, M., Simbirsky, M., Hannigan, B. T., Pesout, T., Houck, M., Misuraca, A., Kingan, S. B., Hall, R., Kronenberg, Z., Sović, I., Dunn, C., Ning, Z., Hastie, A., Lee, J., Selvaraj, S., Green, R. E., Putnam, N. H., Gut, I., Ghurye, J., Garrison, E., Sims, Y., Collins, J., Pelan, S., Torrance, J., Tracey, A., Wood, J., Dagnew, R. E., Guan, D., London, S. E., Clayton, D. F., Mello, C. V., Friedrich, S. R., Lovell, P. V., Osipova, E., Al-Ajli, F. O., Secomandi, S., Kim, H., Theofanopoulou, C., Hiller, M., Zhou, Y., Harris, R. S., Makova, K. D., Medvedev, P., Hoffman, J., Masterson, P., Clark, K., Martin, F., Howe, K., Flicek, P., Walenz, B. P., Kwak, W., Clawson, H., Diekhans, M., Nassar, L., Paten, B., Kraus, R. H. S., Crawford, A. J., Gilbert, M Thomas P, KU, thw266, Venkatesh, B., Murphy, R. W., Koepfli, K., Shapiro, B., Johnson, W. E., Di Palma, F., Marques-Bonet, T., Teeling, E. C., Warnow, T., Graves, J. M., Ryder, O. A., Haussler, D., O’Brien, S. J., Korlach, J., Lewin, H. A., Howe, K., Myers, E. W., Durbin, R., Phillippy, A. M. & Jarvis, E. D., 2021, In: Nature. 592, 7856, p. 737-746 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  86. Published

    Towards an integrated understanding of the consequences of fungus domestication on the fungus-growing termite gut microbiota

    Poulsen, Michael, 2015, In: Environmental Microbiology. 17, 8, p. 2562-2572 11 p.

    Research output: Contribution to journal › Review › Research › peer-review

  87. Published

    Towards a synecological framework for systematic conservation planning

    Hortal, J. & Lobo, J. M., 2006, In: Biodiversity Informatics. 3, p. 16-45

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    Towards a standardisation of morphological measurements in the phylum Kinorhyncha

    González-Casarrubios, A., Cepeda, D., Pardos, F., Neuhaus, B., Yamasaki, H., Herranz, Maria, Grzelak, K., Maiorova, A., Adrianov, A., Dal Zotto, M., Di Domenico, M., Landers, S. C. & Sánchez, N., 2023, In: Zoologischer Anzeiger. 302, p. 217-223 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    Towards a more mechanistic understanding of traits and range sizes

    Laube, I., Korntheuer, H., Schwager, M., Trautmann, S., Rahbek, Carsten & Böhning-Gaese, K., 2013, In: Global Ecology and Biogeography. 22, 2, p. 233-241 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Towards a molecular understanding of symbiont function: identification of a fungal gene for the degradation of xylan in the fungus gardens of leaf-cutting ants.

    Schiøtt, M., de Fine Licht, Henrik Hjarvard, Lange, L. & Boomsma, Jacobus J., 2008, In: BMC Microbiology. 8, p. 40

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    Towards a greater understanding of pattern, scale and process in marine benthic systems: a picture is worth a thousand worms.

    Solan, M., Germano, J. D., Rhoads, D. C., Smith, C., Michaud, E., Parry, D., Wenzhöfer, F., Kennedy, B., Henriques, C., Battle, E., Carey, D., Iocco, L., Valente, R., Watson, J. & Rosenberg, R., 2003, In: Journal of Experimental Marine Biology and Ecology. 285-286, p. 313-338

    Research output: Contribution to journal › Journal article › Research

  92. Published

    Towards a global biogeography of silica-scaled chrysophytes

    Kristiansen, J., 1997, In: Phycologia. 36,4. Supplement, p. p 55

    Research output: Contribution to journal › Journal article › Research

  93. Published

    Towards a glacial-sensitive model of island biogeography

    María Fernández-Palacios, J., Rijsdijk, K. F., Norder, S. J., Otto, R., de Nascimento, L., Fernández-Lugo, S., Tjørve, E. & Whittaker, R. J., 2016, In: Global Ecology and Biogeography. 25, 7, p. 817-830 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    Towards a general probabilistic model of protein structure: the reference ratio method

    Frellsen, J., Mardia, K. V., Borg, M., Ferkinghoff-Borg, J. & Hamelryck, Thomas Wim, 2012, Bayesian methods in structural bioinformatics. Hamelryck, T., Mardia, K. & Ferkinghoff-Borg, J. (eds.). Springer, p. 125-134 10 p. (Statistics for Biology and Health).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  95. Published

    Towards a cognitive semiotics of science: the case of physical chemistry

    May, M., Skriver, Karen & Dandanell, Gert, 2016, Meaning, mind and communication: explorations in cognitive semiotics. Zlatev, J., Sonesson, G. & Konderak, P. (eds.). Peter Lang, p. 101-126 26 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  96. Published

    Towards a better understanding of the evolution of specialized parasites of fungus-growing ant crops

    Yek, S. H., Boomsma, Jacobus J. & Poulsen, Michael, 2012, In: Psyche (Cambridge, 1874). 2012, 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    Towards a barnacle tree of life: integrating diverse phylogenetic efforts into a comprehensive hypothesis of thecostracan evolution

    Ewers-Saucedo, C., Owen, C. L., Pérez-Losada, M., Høeg, Jens Thorvald, Glenner, H., Chan, B. K. K. & Crandall, K. A., 2019, In: PeerJ. 7, 21 p., e7387.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Towards Regional, Error-Bounded Landscape Carbon Storage Estimates for Data-Deficient Areas of the World

    Willcock, S., Phillips, O. L., Platts, P. J., Balmford, A., Burgess, N. D., Lovett, J. C., Ahrends, A., Bayliss, J., Doggart, N., Doody, K., Fanning, E., Green, J., Hall, J., Howell, K. L., Marchant, R., Marshall, A. R., Mbilinyi, B., Munishi, P. K. T., Owen, N., Swetnam, R. D. & 2 others, Topp-Jorgensen, E. J. & Lewis, S. L., 2012, In: PLOS ONE. 7, 9, 10 p., e44795.

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Towards Protein Structure Determination from Energetics, Experiments & Evolution

    Kassem, M. M., 2018, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  100. Published

    Toward mountains without permanent snow and ice

    Huss, M., Bookhagen, B., Huggel, C., Jacobsen, Dean, Bradley, R. S., Clague, J. J., Vuille, M., Buytaert, W., Cayan, D. R., Greenwood, G., Mark, B. G., Milner, A. M., Weingartner, R. & Winder, M., May 2017, In: Earth's Future. 5, 5, p. 418-435 18 p.

    Research output: Contribution to journal › Review › Research › peer-review

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