- 2023
- Published
CNEReg Interprets Ruminant-specific Conserved Non-coding Elements by Developmental Gene Regulatory Network
Pan, X., Ma, Z., Sun, X., Li, H., Zhang, T., Zhao, C., Wang, N., Heller, Rasmus, Hung Wong, W., Wang, W., Jiang, Y. & Wang, Y., 2023, In: Genomics, Proteomics and Bioinformatics. 21, 3, p. 632-648 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Epithelium dynamics differ in time and space when exposed to the permeation enhancers penetramax and EGTA. A head-to-head mechanistic comparison
Panou, D. A., Pedersen, Stine Helene Falsig, Kristensen, Mie & Nielsen, Hanne Mørck, 2023, In: Frontiers in Drug Delivery. 3, 16 p., 1221628.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Xyloplax princealberti (Asteroidea, Echinodermata): A New Species That Is Not Always Associated with Wood Falls
Payne, C. Y., Tilic, E., Boschen-Rose, R. E., Gannon, A., Stiller, Josefin, Hiley, A. S., Grupe, B. M., Mah, C. L. & Rouse, G. W., 2023, In: Diversity. 15, 12, 21 p., 1212.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genome sequence and genomic analysis of liver abscess caused by hypervirulent Klebsiella pneumoniae
Pei, N., Liu, X., Jian, Z., Yan, Q., Liu, Q., Kristiansen, Karsten, Li, J. & Liu, W., 2023, In: 3 Biotech. 13, 3, 7 p., 76.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Outer apoplastic barriers in roots: prospects for abiotic stress tolerance
Peralta Ogorek, Lucas León, Jimenez Serna, Juan de la Cruz, Visser, E. J. W., Takahashi, H., Nakazono, M., Shabala, S. & Pedersen, Ole, 2023, In: Functional Plant Biology. 51, 11 p., FP23133.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Assessment of models for calculating the hydrodynamic radius of intrinsically disordered proteins
Pesce, Francesco, Newcombe, Estella Anne, Seiffert, P., Tranchant, E. E., Olsen, Johan Gotthardt, Grace, C. R., Kragelund, Birthe Brandt & Lindorff-Larsen, Kresten, 2023, In: Biophysical Journal. 122, 2, p. 310-321 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Combining Experiments and Simulations to Examine the Temperature-Dependent Behavior of a Disordered Protein
Pesce, Francesco & Lindorff-Larsen, Kresten, 2023, In: Journal of Physical Chemistry B. 127, 28, p. 6277-6286 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Temporal phosphoproteomics reveals WEE1-dependent control of 53BP1 pathway
Petrosius, V., Benada, Jan, Nielsen, Olaf, Schoof, E. M. & Sørensen, Claus Storgaard, 2023, In: iScience. 26, 1, 24 p., 105806.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transcriptional and epigenomic profiling identifies YAP signaling as a key regulator of intestinal epithelium maturation
Pikkupeura, Laura Maarit, Bardini Bressan, Raul, Guiu, J., Chen, Y., Maimets, Martti, Mayer, Daniela, Schweiger, P. J., Hansen, Stine Lind, Maciag, Grzegorz Jerzy, Larsen, Hjalte List, Lõhmussaar, Kadi, Pedersen, M. T., Teves, Joji Marie Yap, Lange, Jette Bornholdt, Benes, V., Sandelin, Albin Gustav & Jensen, Kim Bak, 2023, In: Science Advances. 9, 28, 16 p., eadf9460.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Past, Present and Future of the Aral Sea - A Review of its Fauna and Flora before and during the Regression Crisis
Plotnikov, I. S., Aladin, N. V., Zhakova, L. V., Mossin, J. & Høeg, Jens Thorvald, 2023, In: Zoological Studies. 62, 38 p., 19.Research output: Contribution to journal › Journal article › Research › peer-review
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A research agenda for nonvascular photoautotrophs under climate change
Porada, P., Bader, M. Y., Berdugo, M. B., Colesie, C., Ellis, C. J., Giordani, P., Herzschuh, U., Ma, Y., Launiainen, S., Nascimbene, J., Petersen, I., Raggio Quílez, J., Rodríguez-Caballero, E., Rousk, K., Sancho, L. G., Scheidegger, C., Seitz, S., Van Stan, J. T., Veste, M., Weber, B. & 1 others, , 2023, In: New Phytologist. 237, 5, 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
tRNAs Are Stable After All: Pitfalls in Quantification of tRNA from Starved Escherichia coli Cultures Exposed by Validation of RNA Purification Methods
Prossliner, T., Agrawal, S., Heidemann, Ditte Fogh, Sorensen, M. A. A. & Svenningsen, Sine Lo, 2023, In: mBio. 14, 1, 18 p., e02805-22.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Systematic Analysis of Long Non-Coding RNAs in Inflammasome Activation in Monocytes/Macrophages
Qian, N., Distefano, R., Ilieva, M., Madsen, J. H., Rennie, Sarah & Uchida, S., 2023, In: Non-coding RNA. 9, 5, 16 p., 50.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A population of stem cells with strong regenerative potential discovered in deer antlers
Qin, T., Zhang, G., Zheng, Y., Li, S., Yuan, Y., Li, Q., Hu, M., Si, H., Wei, G., Gao, X., Cui, X., Xia, B., Ren, J., Wang, K., Ba, H., Liu, Z., Heller, R., Li, Z., Wang, W., Huang, J. & 2 others, , 2023, In: Science (New York, N.Y.). 379, 6634, p. 840-847 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Colonialism in South Africa leaves a lasting legacy of reduced genetic diversity in Cape buffalo
Quinn, Liam James Elgaard, Garcia Erill, Genís, Santander, Cindy, Brüniche-Olsen, Anna, Liu, Xiaodong, Sinding, Mikkel Holger Strander, Heaton, M. P., Smith, T. P. L., Chrzanová Pecnerová, Patrícia, Bertola, Laura, Hanghøj, Kristian Ebbesen, Rasmussen, Malthe Sebro, De Jager, Deon, Siegismund, Hans Redlef, Albrechtsen, Anders, Heller, Rasmus & Moltke, Ida, 2023, In: Molecular Ecology. 32, 8, 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Molecular Epidemiology of HCV RNA Genotype-3 in Dhaka City, Bangladesh
Rahman, M. A., Islam, M. M., Ali, M. E., Islam, M. A., Afroze, F., Hossain, Mohammad Shamim & Rus'd, A. A., 2023, In: Global Medical Genetics. 10, 3, p. 199-204 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Co-diversification of an intestinal Mycoplasma and its salmonid host
Rasmussen, Jacob Agerbo, Kiilerich, P., Madhun, A. S., Waagbø, R., Lock, E. J. R., Madsen, L., Gilbert, M Thomas P, Kristiansen, Karsten & Limborg, Morten Tønsberg, 2023, In: ISME Journal. 17, 5, p. 682-692 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Hepatic PGC-1α has minor regulatory effect on the liver transcriptome and metabolome during high fat high fructose diet and exercise training
Rasmussen, M. K., Thøgersen, R., Horsbøl Lindholm, P., Bertram, H. C. & Pilegaard, Henriette, 2023, In: Gene. 851, 14 p., 147039.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Xenobiotic Exposure and Migraine-Associated Signaling: A Multimethod Experimental Study Exploring Cellular Assays in Combination with Ex Vivo and In Vivo Mouse Models
Rasmussen, Rikke Holm, Christensen, S. L., Callø, Kirstine, Nielsen, B. S., Rehfeld, A., Taylor-Clark, T. E., Haanes, Kristian Agmund, Taboureau, O., Audouze, K., Klærke, Dan Arne, Olesen, Jes & Kristensen, D. M., 2023, In: Environmental Health Perspectives. 131, 11, 14 p., 117003.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbial Dynamics in Newly Diagnosed and Treatment Naive IBD Patients in the Mediterranean
Rausch, P., Ellul, S., Pisani, A., Bang, C., Tabone, T., Cordina, C. M., Zahra, G., Franke, A. & Ellul, P., 2023, In: Inflammatory Bowel Diseases. 29, 7, 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rodent behavior following a dural inflammation model with anti-CGRP migraine medication treatment
Reducha, Philip Victor, Bömers, J. P., Edvinsson, L. & Haanes, Kristian Agmund, 2023, In: Frontiers in Neurology. 14, 13 p., 1082176.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
National records of 3000 European bee and hoverfly species: A contribution to pollinator conservation
Reverté, S., Miličić, M., Ačanski, J., Andrić, A., Aracil, A., Aubert, M., Balzan, M. V., Bartomeus, I., Bogusch, P., Bosch, J., Budrys, E., Cantú-Salazar, L., Castro, S., Cornalba, M., Demeter, I., Devalez, J., Dorchin, A., Dufrêne, E., Đorđević, A., Fisler, L. & 87 others, , 2023, In: Insect Conservation and Diversity. 16, 6, p. 758-775 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fine-scale mapping of physicochemical and microbial landscapes of the coral skeleton
Ricci, F., Tandon, K., Moßhammer, Maria, Cho, E. H. J., Blackall, L. L., Kühl, Michael & Verbruggen, H., 2023, In: Environmental Microbiology. 25, 8, p. 1505-1521 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Uncertainty-aware and explainable machine learning for early prediction of battery degradation trajectory
Rieger, L. H., Flores, E., Nielsen, K. F., Norby, P., Ayerbe, E., Winther, Ole, Vegge, T. & Bhowmik, A., 2023, In: Digital Discovery. 2, 1, p. 112-122 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Seasonal and Elevational Variability in Dwarf Birch VOC Emissions in Greenlandic Tundra
Rieksta, Jolanta, Li, Tao, Davie-Martin, Cleo Lisa, Simin, Tihomir, Brogaard Aeppli, L. C., Høye, T. T., Rasmussen, Morten Arendt & Rinnan, Riikka, 2023, In: Journal of Geophysical Research: Biogeosciences. 128, 11, 17 p., e2023JG007475.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Volatile responses of dwarf birch to mimicked insect herbivory and experimental warming at two elevations in Greenlandic tundra
Rieksta, Jolanta, Li, T., Davie-Martin, Cleo Lisa, Aeppli, L. C. B., Høye, T. T. & Rinnan, Riikka, 2023, In: Plant-Environment Interactions. 4, 1, 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A single-chain variable fragment selected against a conformational epitope of a recombinantly produced snake toxin using phage display
Rimbault, C., Knudsen, P. D., Damsbo, A., Boddum, K., Ali, H., Hackney, Celeste Menuet, Ellgaard, Lars, Bohn, M. & Laustsen, A. H., 2023, In: New Biotechnology. 76, p. 23-32 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Impact of Aging and Lifelong Exercise Training on Mitochondrial Function and Network Connectivity in Human Skeletal Muscle
Jørgensen, Stine Ringholm, Gudiksen, Anders, Halling, Jens Frey, Qoqaj, A., Rasmussen, P. M., Prats Gavalda, Clara, Plomgaard, Peter Stendahl & Pilegaard, Henriette, 2023, In: Journals of Gerontology. Series A: Biological Sciences & Medical Sciences. 78, 3, 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Pervasive incomplete lineage sorting illuminates speciation and selection in primates
Rivas-González, I., Rousselle, M., Li, F., Zhou, L., Dutheil, J. Y., Munch, K., Shao, Y., Wu, D., Schierup, M. H. & KU, thw266, 2023, In: Science (New York, N.Y.). 380, 6648, 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Potential usages of A-to-I RNA editing patterns as diagnostic biomarkers
Rodriguez Morales, D., Ilieva, M., Rennie, Sarah & Uchida, S., 2023, In: American journal of physiology. Cell physiology. 324, 4, p. C837-C842 6 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
The infant gut virome is associated with preschool asthma risk independently of bacteria
Rodríguez, C. L., Shah, S. A., Rasmussen, Morten Arendt, Thorsen, J., Boulund, U., Pedersen, C. T., Castro-Mejía, J. L., Poulsen, Christina Egeø, Poulsen, C. S., Deng, Ling, Larsen, Frej Andreas Nøhr, Widdowson, Michael Lawrence, Zhang, Yichang, Sørensen, Søren Johannes, Moineau, S., Petit, M. A., Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Nielsen, Dennis Sandris & Stokholm, Jakob, 2023, In: Nature Medicine. 30, p. 138-148 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Drivers and ecology of Ceratium furcoides invasion of a Brazilian subtropical reservoir and its interaction with the phytoplankton community
Rojas-Castillo, O. A., Pereira, L., Buffon, P. & de Souza Cardoso, L., 2023, In: Limnologica. 101, 13 p., 126080.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Forest buffer-strips mitigate the negative impact of oil palm plantations on stream communities
Rojas-castillo, O. A., Kepfer Rojas, Sebastian, Vargas, N. & Jacobsen, Dean, 2023, In: Science of the Total Environment. 873, 12 p., 162259.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chronic acidosis rewires cancer cell metabolism through PPARα signaling
Rolver, M. G., Holland, L. K. K., Ponniah, M., Prasad, N. S., Yao, Jiayi, Schnipper, J., Kramer, S., Elingaard-Larsen, L., Pedraz-Cuesta, E., Liu, B., Pardo, L. A., Maeda, K., Sandelin, Albin Gustav & Pedersen, Stine Helene Falsig, 2023, In: International Journal of Cancer. 152, 8, 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Community dynamics and co-occurrence relationships of pelagic ciliates and their potential prey at a coastal and an offshore station in the ultra-oligotrophic Eastern Mediterranean Sea
Romano, F., Pitta, P. & John, U., 2023, In: Frontiers in Genetics. 14, 15 p., 1219085.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Folding of heterologous proteins in bacterial cell factories: Cellular mechanisms and engineering strategies
Rong, Y., Jensen, S. I., Lindorff-Larsen, Kresten & Nielsen, A. T., 2023, In: Biotechnology Advances. 63, 21 p., 108079.Research output: Contribution to journal › Review › Research › peer-review
- Published
Full activation of thermogenesis in brown adipocytes requires Basigin action
Rupar, K., Isidor, Marie Sophie, Argemi Muntadas, Lidia, Agueda Oyarzabal, Marina, Plucinska, Kaja, Brown, E. L., Mattanovich, M., Bossi, Simone, Tozzi, M., Tandio, David, Petersen, P. S. S., Henriksen, T. I., Trošt, K., Hansen, Jacob B., Gerhart-Hines, Zach, Nielsen, S., Moritz, Thomas & Emanuelli, Brice, 2023, In: F E B S Journal. 290, 10, p. 2673-2691Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Physiological effects of temperature on Greenland halibut Reinhardtius hippoglossoides shows high vulnerability of Arctic stenotherms to global warming
Ruth, A., Svendsen, M. B. S., Nygaard, R., Christensen, E. A. F., Bushnell, P. G. & Steffensen, John Fleng, 2023, In: Journal of Fish Biology. 103, 3, p. 675-683 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genes with epigenetic alterations in human pancreatic islets impact mitochondrial function, insulin secretion, and type 2 diabetes
Rönn, T., Ofori, J. K., Perfilyev, A., Hamilton, Alexander, Pircs, K., Eichelmann, F., Garcia-Calzon, S., Karagiannopoulos, A., Stenlund, H., Wendt, A., Volkov, P., Schulze, M. B., Mulder, H., Eliasson, L., Ruhrmann, S., Bacos, K. & Ling, C., 2023, In: Nature Communications. 14, 1, 21 p., 8040.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamic social interactions and keystone species shape the diversity and stability of mixed-species biofilms – an example from dairy isolates
Sadiq, F. A., De Reu, K., Steenackers, H., Van De Walle, A., Burmølle, Mette & Heyndrickx, M., 2023, In: ISME communications. 3, 1, 12 p., 118.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Synergistic interactions in multispecies biofilm combinations of bacterial isolates recovered from diverse food processing industries
Sadiq, F. A., De Reu, K., Burmølle, Mette, Maes, S. & Heyndrickx, M., 2023, In: Frontiers in Microbiology. 14, 13 p., 1159434.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Advances in mass spectrometry to unravel the structure and function of protein condensates
Sahin, Cagla, Leppert, A. & Landreh, M., 2023, In: Nature Protocols. 18, p. 3653–3661 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mass Spectrometry of RNA-Binding Proteins during Liquid-Liquid Phase Separation Reveals Distinct Assembly Mechanisms and Droplet Architectures
Sahin, Cagla, Motso, A., Gu, X., Feyrer, H., Lama, D., Arndt, T., Rising, A., Gese, G. V., Haellberg, B. M., Marklund, E. G., Schafer, N. P., Petzold, K., Teilum, Kaare, Wolynes, P. G. & Landreh, M., 2023, In: Journal of the American Chemical Society. 145, 19, 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Vertical and horizontal gene transfer shaped plant colonization and biomass degradation in the fungal genus Armillaria
Sahu, N., Indic, B., Wong-Bajracharya, J., Merényi, Z., Ke, H. M., Ahrendt, S., Monk, T. L., Kocsubé, S., Drula, E., Lipzen, A., Bálint, B., Henrissat, B., Andreopoulos, B., Martin, F. M., Bugge Harder, C., Rigling, D., Ford, K. L., Foster, G. D., Pangilinan, J., Papanicolaou, A. & 14 others, , 2023, In: Nature Microbiology. 8, 27 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chromosome-scale genomes of commercial timber trees (Ochroma pyramidale, Mesua ferrea, and Tectona grandis)
Sahu, S. K., Liu, M., Chen, Y., Gui, J., Fang, D., Chen, X., Yang, T., He, C., Cheng, L., Yang, J., Sahu, D. N., Li, L., Wang, H., Mu, W., Wei, J., Liu, J., Zhao, Y., Zhang, S., Lisby, M., Liu, X. & 4 others, , 2023, In: Scientific Data. 10, 1, 13 p., 512.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chromosome-scale genomes of commercially important mahoganies, Swietenia macrophylla and Khaya senegalensis
Sahu, S. K., Liu, M., Wang, G., Chen, Y., Li, R., Fang, D., Sahu, D. N., Mu, W., Wei, J., Liu, J., Zhao, Y., Zhang, S., Lisby, Michael, Liu, X., Xu, X., Li, L., Wang, S., Liu, Huan & He, C., 2023, In: Scientific Data. 10, 9 p., 832.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Composition and distribution of diazotrophs in the Baltic Sea
Salamon Slater, E. R., Turk-kubo, K. A., Hallstrøm, S., Kesy, K., Laas, P., Magasin, J., Zehr, J. P., Labrenz, M. & Riemann, Lasse, 2023, In: Estuarine, Coastal and Shelf Science. 294, 12 p., 108527.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A “grappling hook” interaction connects self-assembly and chaperone activity of Nucleophosmin 1
Saluri, M., Leppert, A., Gese, G. V., Sahin, Cagla, Lama, D., Kaldmäe, M., Chen, G., Elofsson, A., Allison, T. M., Arsenian-henriksson, M., Johansson, J., Lane, D. P., Hällberg, B. M. & Landreh, M., 2023, In: PNAS Nexus. 2, 2, 9 p., pgac303.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transfer learning identifies sequence determinants of cell-type specific regulatory element accessibility
Salvatore, Marco, Horlacher, M., Marsico, A., Winther, Ole & Andersson, Robin, 2023, In: NAR Genomics and Bioinformatics. 5, 2, 10 p., 026.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative genomics of Stutzerimonas balearica (Pseudomonas balearica): diversity, habitats, and biodegradation of aromatic compounds
Salvà-Serra, F., Pérez-Pantoja, D., Donoso, R. A., Jaén-Luchoro, D., Fernandez Juarez, Victor, Engström-Jakobsson, H., Moore, E. R. B., Lalucat, J. & Bennasar-Figueras, A., 2023, In: Frontiers in Microbiology. 14, 19 p., 1159176.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Heterogeneous vasomotor responses in segments from Göttingen Minipigs coronary, cerebral, and mesenteric artery: A comparative study
Nielsen, Anette Sams, Haanes, Kristian Agmund, Holm, A., Kazantzi, Spyridoula, Mikkelsen, L. F., Edvinsson, L., Brain, S. & Sheykhzade, Majid, 2023, In: Vascular Pharmacology. 153, 107231.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Influence of Body Size on Behavioral Thermal Preference in Atlantic Cod (Gadus morhua): Larger Fish Favor Colder Waters
Schakmann, M., Christensen, E. A. F., Steffensen, John Fleng & Svendsen, M. B. S., 2023, In: Fishes. 8, 12, 11 p., 596.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Abrupt permafrost thaw triggers activity of copiotrophs and microbiome predators
Scheel, M., Zervas, A., Rijkers, R., Tveit, A. T., Ekelund, Flemming, Campuzano Jiménez, F., Christensen, T. R. & Jacobsen, C. S., 2023, In: FEMS Microbiology Ecology. 99, 11, 12 p., fiad123.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sequential analysis of δ15N in guard hair suggests late gestation is the most critical period for muskox calf recruitment
Schmidt, N. M., Michelsen, Anders, Hansen, L. H., Aggerbeck, M. R., Stelvig, M., Kutz, S. & Mosbacher, J. B., 2023, In: Rapid Communications in Mass Spectrometry. 37, 6, 7 p., e9470.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Make the environment protect you from disease: elevated CO2 inhibits antagonists of the fungus-farming termite symbiosis
Schmidt, Suzanne, Bos, N., Murphy, R., Koné, N. A., Silué, K. S., Meyling, Nicolai Vitt & Poulsen, Michael, 2023, In: Frontiers in Ecology and Evolution. 11, 9 p., 1134492.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Local adaptation through countergradient selection in northern populations of Skeletonema marinoi
Sefbom, J., Kremp, A., Hansen, Per Juel, Johannesson, K., Godhe, A. & Rengefors, K., 2023, In: Evolutionary Applications. 16, 2, 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genome mining for macrolactam-encoding gene clusters allowed for the network-guided isolation of β-amino acid-containing cyclic derivatives and heterologous production of ciromicin A
Seibel, E., Um, S., Dayras, M., Bodawatta, Kasun Harshana, de Kruijff, M., Jønsson, Knud Andreas, Poulsen, Michael, Kim, K. H. & Beemelmanns, C., 2023, In: Communications Chemistry. 6, 15 p., 257.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genetic Loss of Sucrase-Isomaltase Function: Mechanisms, Implications, and Future Perspectives
Senftleber, N. K., Ramne, Stina, Moltke, Ida, Jørgensen, M. E., Albrechtsen, Anders, Hansen, Torben & Lepola, Mette Andersen, 2023, In: Application of Clinical Genetics. 16, p. 31-39 9 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Dynamic localization of the Na+-HCO3- co-transporter NBCn1 to the plasma membrane, centrosomes, spindle and primary cilia
Severin, M., Pedersen, E. L., Borre, M. T., Axholm, I., Christiansen, F. B., Ponniah, M., Czaplinska, D., Larsen, T., Pardo, L. A. & Pedersen, Stine Helene Falsig, 2023, In: Journal of Cell Science. 136, 7, 20 p., jcs260687.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Expanding known viral diversity in the healthy infant gut
Shah, S. A., Deng, L., Thorsen, J., Pedersen, A. G., Dion, M. B., Castro-Mejía, J. L., Silins, R., Romme, F. O., Sausset, R., Jessen, L. E., Ndela, E. O., Hjelmsø, M., Rasmussen, M. A., Redgwell, T. A., Rodríguez, C. L., Vestergaard, G., Zhang, Y., Chawes, B., Bønnelykke, K., Sørensen, S. J. & 6 others, , 2023, In: Nature Microbiology. 8, p. 986–998Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The enormous repetitive Antarctic krill genome reveals environmental adaptations and population insights
Shao, C., Sun, S., Liu, K., Wang, J., Li, S., Liu, Q., Deagle, B. E., Seim, I., Biscontin, A., Wang, Q., Liu, X., Kawaguchi, S., Liu, Y., Jarman, S., Wang, Y., Wang, H. Y., Huang, G., Hu, J., Feng, B., De Pittà, C. & 29 others, , 2023, In: Cell. 186, 6, p. 1279-1294.e19 36 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Phylogenomic analyses provide insights into primate evolution
Shao, Y., Zhou, L., Li, F., Zhao, L., Zhang, B. L., Shao, F., Chen, J. W., Chen, C. Y., Bi, X., Zhuang, X. L., Zhu, H. L., Hu, J., Sun, Z., Li, X., Wang, D., Rivas-González, I., Wang, S., Wang, Y. M., Chen, W., Li, G. & 23 others, , 2023, In: Science (New York, N.Y.). 380, 6648, p. 913-924 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Global oceanic diazotroph database version 2 and elevated estimate of global oceanic N2 fixation
Shao, Z., Xu, Y., Wang, H., Luo, W., Wang, L., Huang, Y., Agawin, N. S. R., Ahmed, A., Benavides, M., Bentzon-Tilia, M., Berman-Frank, I., Berthelot, H., C. Biegala, I., B. Bif, M., Bode, A., Bonnet, S., A. Bronk, D., Brown, M. V., Campbell, L., G. Capone, D. & 77 others, , 2023, In: Earth System Science Data. 15, 8, p. 3673-3709 37 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bridging the gap in African biodiversity genomics and bioinformatics
Sharaf, A., Ndiribe, C. C., Omotoriogun, T. C., Abueg, L., Badaoui, B., Badiane Markey, F. J., Beedessee, G., Diouf, D., Duru, V. C., Ebuzome, C., Eziuzor, S. C., Jaufeerally Fakim, Y., Formenti, G., Ghanmi, N., Guerfali, F. Z., Houaga, I., Ideozu, J. E., Katee, S. M., Khayi, S., Kuja, J. O. & 16 others, , 2023, In: Nature Biotechnology. 41, 9, p. 1348-1354 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dissecting aneuploidy phenotypes by constructing Sc2.0 chromosome VII and SCRaMbLEing synthetic disomic yeast
Shen, Y., Gao, F., Wang, Y., Wang, Y., Zheng, J., Gong, J., Zhang, J., Luo, Z., Schindler, D., Deng, Y., Ding, W., Lin, T., Swidah, R., Zhao, H., Jiang, S., Zeng, C., Chen, S., Chen, T., Wang, Y., Luo, Y. & 11 others, , 2023, In: Cell Genomics. 3, 11, 19 p., 100364.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Hepatitis C virus RNA is 5'-capped with flavin adenine dinucleotide
Sherwood, A. V., Rivera-Rangel, L. R., Ryberg, L. A., Larsen, H. S., Anker, K. M., Costa, R., Vågbø, C. B., Jakljevič, E., Pham, L. V., Fernandez-Antunez, C., Indrisiunaite, G., Podolska-Charlery, A., Grothen, J. E. R., Langvad, N. W., Fossat, N., Offersgaard, A., Al-Chaer, A., Nielsen, L., Kuśnierczyk, A., Sølund, C. & 8 others, , 2023, In: Nature. 619, p. 811-818Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Distribution patterns of selenium and its fractions in penguin and seal colony soil profiles in response to their population dynamics in maritime Antarctica
Shui, Y., Ye, W., Zhang, W., Yuan, L., Jiao, Yi, Sun, B., Zang, H., Yin, X. & Zhu, R., 2023, In: Polar Biology. 46, 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deep integrative models for large-scale human genomics
Sigurdsson, Arnór Ingi, Louloudis, Ioannis, Banasik, Karina, Westergaard, David, Winther, Ole, Lund, O., Ostrowski, Sisse Rye, Erikstrup, C., Pedersen, Ole Birger Vesterager, Nyegaard, Mette, Brunak, Søren, Vilhjálmsson, B. & Rasmussen, Simon, 2023, In: Nucleic Acids Symposium Series. 51, 12, 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Parallel evolution of fish bi-modal breathing and expansion of olfactory receptor (OR) genes: toward a universal ORs nomenclature
Silva, L., Mendes, T., Ramos, L., KU, thw266 & Antunes, A., 2023, In: Journal of Genetics and Genomics. 50, 8, 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Pharmacological Nature of the Purinergic P2Y Receptor Subtypes That Participate in the Blood Pressure Changes Produced by ADPβS in Rats
Silva-Velasco, R. C., Villanueva-Castillo, B., Haanes, Kristian Agmund, MaassenVanDenBrink, A. & Villalón, C. M., 2023, In: Pharmaceuticals. 16, 12, 19 p., 1683.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Selective enrichment of founding reproductive microbiomes allows extensive vertical transmission in a fungus-farming termite
Sinotte, Veronica Marie, Renelies-Hamilton, J., Andreu-Sánchez, S., Vasseur-Cognet, M. & Poulsen, Michael, 2023, In: Proceedings of the Royal Society B: Biological Sciences. 290, 2009, 12 p., 20231559.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
GDF15 increases insulin action in the liver and adipose tissue via a β-adrenergic receptor-mediated mechanism
Sjøberg, K. A., Sigvardsen, Casper Møller, Alvarado-Diaz, A., Andersen, Nicoline Resen, Larance, M., Seeley, R. J., Schjerling, Peter, Knudsen, Jakob Grunnet, Katzilieris Petras, Georgios, Clemmensen, Christoffer, Jørgensen, S. B., De Bock, K. & Richter, Erik A., 2023, In: Cell Metabolism. 35, 8, p. 1327-1340.e5 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nitrogen fixation associated with two cohabiting moss species expresses different patterns under Cu and Zn contamination
Sjøgren, T. D., Wang, Y. & Rousk, Kathrin, 2023, In: Environmental Science and Pollution Research. 30, p. 85701-85707 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conformational entropy in molecular recognition of intrinsically disordered proteins
Skriver, Karen, Theisen, Frederik Friis & Kragelund, Birthe Brandt, 2023, In: Current Opinion in Structural Biology. 83, 8 p., 102697.Research output: Contribution to journal › Review › Research › peer-review
- Published
Intrinsically Disordered Proteins as an Instrument for Research-Integrating Teaching
Skriver, K., Sjørup, S. A., Langkilde, A. E., Balouka, E., Christensen, C. S., Carbel, K., Decker, J. N. V., Essenbæk, D. N., Gräf, J. F., Jessen, C. H., Kristensen, P., Merrild, C., Mortensen, T. S., Nalepa, I. F., Nordsteen, B. W., Svoren, S. K., van Hall, M., Weicher, J., Wind, M. L., Zhang, D. & 8 others, , 2023, In: The Biophysicist. 4 , 2, p. 1-7 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dietary diversity, sociality, and the evolution of ant gustation
Smith, E. J., Vizueta Moraga, Joel, Younger, M. A. A., Mullen, S. P. P. & Traniello, J. F. A., 2023, In: Frontiers in Ecology and Evolution. 11, 9 p., 1175719.Research output: Contribution to journal › Review › Research › peer-review
- Published
Marchantiana pyramus, M. ramulicola and Austroplaca thisbe (Teloschistaceae, lichenized Ascomycota) - three new twig lichens from southern Patagonia
Søchting, Ulrik, Sancho, L. G. & Arup, U., 2023, In: Lichenologist. 55, 5, p. 377-387 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The quantitative importance of key root traits for radial water loss under low water potential
Song, Zhiwei, Zonta, F., Peralta Ogorek, Lucas León, Bastegaard, V. K., Herzog, Max, Pellegrini, Elisa & Pedersen, Ole, 2023, In: Plant and Soil. 482, 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The ABA/LANCL1/2 Hormone/Receptor System Controls Adipocyte Browning and Energy Expenditure
Spinelli, S., Cossu, V., Passalacqua, M., Hansen, Jacob B., Guida, L., Magnone, M., Sambuceti, G., Marini, C., Sturla, L. & Zocchi, E., 2023, In: International Journal of Molecular Sciences. 24, 4, 27 p., 3489.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Hydrostatic pressure induces transformations in the organic matter and microbial community composition of marine snow particles
Stief, P., Schauberger, C., Becker, K. W., Elvert, M., Balmonte, J. P., Franco-Cisterna, B., Middelboe, Mathias & Glud, R. N., 2023, In: Communications Earth and Environment. 4, 1, 14 p., 377.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Range-wide population genomics of common seadragons shows secondary contact over a former barrier and insights on illegal capture
Stiller, Josefin, Wilson, N. G. & Rouse, G., 2023, In: BMC Biology. 21, 17 p., 129.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Floods stress in lowland rice production: experiences of rice farmers in Kilombero and Lower-Rufiji floodplains, Tanzania
Sulle Michael, P., Mwakyusa, L., G. Sanga, H., J. Shitindi, M., Kwaslema, D. R., Herzog, Max, L. Meliyo, J. & Massawe, B. H. J., 2023, In: Frontiers in Sustainable Food Systems. 7, 18 p., 1206754.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Uncovering spatiotemporal pattern of floods with Sentinel-1 synthetic aperture radar in major rice-growing river basins of Tanzania
Sulle Michael, P., G. Sanga, H., J. Shitindi, M., Herzog, Max, L. Meliyo, J. & Massawe, B. H. J., 2023, In: Frontiers in Earth Science. 11, 15 p., 1183834.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Age-dependent changes in the gut microbiota and serum metabolome correlate with renal function and human aging
Sun, L., Li, Z., Hu, C., Ding, J., Zhou, Q., Pang, G., Wu, Z., Yang, R., Li, S., Li, J., Cai, J., Sun, Y., Li, R., Zhen, H., Sun, S., Zhang, J., Fang, M., Chen, Z., Lv, Y., Cao, Q. & 36 others, , 2023, In: Aging Cell. 22, 12, 20 p., e14028.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
How protons pave the way to aggressive cancers
Swietach, P., Boedtkjer, E. & Pedersen, Stine Helene Falsig, 2023, In: Nature Reviews Cancer. 23, p. 825-841 17 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Historic Sampling of a Vanishing Beast: Population Structure and Diversity in the Black Rhinoceros
Sánchez-Barreiro, F., Westbury, Binia De Cahsan, Westbury, Michael Vincent, Sun, Xin, Margaryan, Ashot, Fontsere, Claudia, Bruford, M. W., Russo, I. M., Kalthoff, D. C., Sicheritz-Pontén, Thomas, Petersen, Bent, Dalén, L., KU, thw266, Marquès-Bonet, T., Gilbert, M Thomas P & Moodley, Y., 2023, In: Molecular Biology and Evolution. 40, 9, 19 p., msad180.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An overview of plasmid transfer in the plant microbiome
Sánchez-Salazar, A. M., Taparia, Tanvi, Olesen, Asmus Kalckar, Acuña, J. J., Sørensen, Søren Johannes & Jorquera, M. A., 2023, In: Plasmid. 127, 11 p., 102695.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Methane and carbon dioxide fluxes at high spatiotemporal resolution from a small temperate lake
Sø, Jonas Stage, Sand-Jensen, Kaj, Martinsen, K. T., Polauke, E., Kjær, Johan Emil, Reitzel, K. & Kragh, T., 2023, In: Science of the Total Environment. 878, 11 p., 162895.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The lichen genera Gondwania and Transdrakea gen. nov. (Teloschistaceae) - speciation in three southern continents
Søchting, Ulrik, Sancho, L. G. & Arup, U., 2023, In: Plant and Fungal Systematics. 68, 2, p. 304-319 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Synergistic effects of agonists and two-pore-domain potassium channels on secretory responses of human pancreatic duct cells Capan-1
Sørensen, Christiane Elisabeth, Trauzold, A., Christensen, Nynne, Tawfik, D., Szczepanowski, M. & Novak, Ivana, 2023, In: Pflügers Archiv - European Journal of Physiology. 475, 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Living on the edge – first survey of loriciferans along the Atacama Trench
Sørensen, Martin Vinther, Herranz, Maria, Grzelak, K., Shimabukuro, M., Kristensen, Reinhardt Møbjerg & Zeppilli, D., 2023, In: European Journal of Taxonomy. 879, p. 162-187Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Every refuge has its price: Ostreobium as a model for understanding how algae can live in rock and stay in business
Tandon, K., Pasella, M. M., Iha, C., Ricci, F., Hu, J., O'Kelly, C. J., Medina, M., Kühl, Michael & Verbruggen, H., 2023, In: Seminars in Cell and Developmental Biology. 134, p. 27-36 10 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
High-latitude vegetation changes will determine future plant volatile impacts on atmospheric organic aerosols
Tang, Jing, Zhou, P., Miller, P. A., Schurgers, Guy, Gustafson, A., Makkonen, R., Fu, Y. H. & Rinnan, Riikka, 2023, In: npj Climate and Atmospheric Science. 6, 1, 13 p., 147.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comment on “Intrinsic protein disorder uncouples affinity from binding specificity”
Teilum, Kaare, Olsen, Johan Gotthardt & Kragelund, Birthe Brandt, 2023, In: Protein Science. 32, 4, 2 p., e4602.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Possible signs of recovery of the nearly extirpated Spitsbergen bowhead whales: calves observed in east Greenland
Tervo, O. M., Louis, Marie Georgette Yolande J, Sinding, Mikkel Holger Strander, Heide-Jørgensen, M. P. & Hansen, R. G., 2023, In: Polar Research. 42, 4 p., 8809.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Improved predictions of phase behaviour of intrinsically disordered proteins by tuning the interaction range
Tesei, Giulio & Lindorff-Larsen, Kresten, 2023, In: Open Research Europe. 2, 94, 24 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DeepPeptide predicts cleaved peptides in proteins using conditional random fields
Teufel, Felix Georg, Refsgaard, J. C., Madsen, C. T., Stahlhut, C., Grønborg, M., Winther, Ole & Madsen, D., 2023, In: Bioinformatics (Oxford, England). 39, 10, 6 p., btad616.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deorphanizing Peptides Using Structure Prediction
Teufel, Felix Georg, Refsgaard, J. C., Kasimova, M. A., Deibler, K., Madsen, C. T., Stahlhut, C., Grønborg, M., Winther, Ole & Madsen, D., 2023, In: Journal of Chemical Information and Modeling. 63, 9, 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
GraphPart: homology partitioning for biological sequence analysis
Teufel, Felix Georg, Gíslason, M. H., Almagro Armenteros, J. J., Johansen, A. R., Winther, Ole & Nielsen, H., 2023, In: NAR Genomics and Bioinformatics. 5, 4, 9 p., lqad088.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Drying of Springs in the Himalayan Region of Nepal: Perspectives of Local Government Leaders on Causes, Consequences, and Conservation Efforts
Thapa, B., Bhattarai, C., Dahal, N., Tiwari, S. & Jacobsen, Dean, 2023, In: Mountain Research and Development. 43, 4, p. R9-R15 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Genetic diversity within lichen photobionts of the Lecanora varia group (Lichenes, Ascomycota)
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Long-term survival of dinoflagellate cysts in anoxic marine sediments.
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Danmarks biodiversitets fremtid: de væsentligste udfordringer og højest prioriterede virkemidler
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Recommendations for the Organisational Framework for Excellence at UCPH
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