Department of Biology

 

 
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  1. 2024
  2. Published

    A region of suppressed recombination misleads neoavian phylogenomics

    Mirarab, S., Rivas-González, I., Feng, S., Stiller, Josefin, Fang, Q., Mai, U., Hickey, G., Chen, G., Brajuka, N., Fedrigo, O., Formenti, G., Wolf, J. B. W., Howe, K., Antunes, A., Schierup, M. H., Paten, B., Jarvis, E. D., KU, thw266 & Braun, E. L., 1 Apr 2024, In: Proceedings of the National Academy of Sciences. 121, 15, 10 p., e2319506121.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Drosophila cytokine GBP2 exerts immune responses and regulates GBP1 expression through GPCR receptor Mthl10

    Ono, M., Matsumura, T., Sung, E. J., Koyama, Takashi, Ochiai, M., Shears, S. B. & Hayakawa, Y., 2024, In: Insect Biochemistry and Molecular Biology. 167, 7 p., 104086.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    In situ incubation of iron(II)-bearing minerals and Fe(0) reveals insights into metabolic flexibility of chemolithotrophic bacteria in a nitrate polluted karst aquifer

    Visser, A. N., Martin, Joseph Donald, Osenbrück, K., Rügner, H., Grathwohl, P. & Kappler, A., 2024, In: Science of the Total Environment. 926, 16 p., 172062.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    A brief history of metal recruitment in protozoan predation

    Yu, Y., Li, Y. P., Ren, K., Hao, X., Fru, E. C., Rønn, Regin, Rivera, W. L., Becker, K., Feng, R., Yang, J. & Rensing, C., 2024, In: Trends in Microbiology. 32, 5, p. 465-476 12 p.

    Research output: Contribution to journal › Review › Research › peer-review

  6. Published

    A comparison of short-read, HiFi long-read, and hybrid strategies for genome-resolved metagenomics

    Eisenhofer Philipona, Raphael A, Nesme, J., Santos-Bay, Luisa, Koziol, Adam Leslie, Sørensen, Søren Johannes, Alberdi, Antton & Aizpurua Arrieta, Ostaizka, 2024, In: Microbiology Spectrum. 12, 4, 14 p., e03590-23.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    A comprehensive evaluation of hydrological processes in a second-generation dynamic vegetation model

    Zhou, H., Tang, Jing, Olin, S. & Miller, P. A., 2024, In: Hydrological Processes. 38, 4, 17 p., e15152.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    A druggable conformational switch in the c-MYC transactivation domain

    Lama, D., Vosselman, T., Sahin, Cagla, Liaño-pons, J., Cerrato, C. P., Nilsson, L., Teilum, Kaare, Lane, D. P., Landreh, M. & Arsenian Henriksson, M., 2024, In: Nature Communications. 15, 1, 14 p., 1865.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    A mutational atlas for Parkin proteostasis

    Clausen, L., Voutsinos, Vasileios, Cagiada, Matteo, Johansson, Kristoffer Enøe, Grønbæk-Thygesen, Martin, Nariya, S., Powell, R. L., Have, M. K. N., Østergaard, Vibe Hallundbæk, Stein, Amelie, Fowler, D. M., Lindorff-Larsen, Kresten & Hartmann-Petersen, Rasmus, 2024, In: Nature Communications. 15, 1, 17 p., 1541.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    A new temperature-photoperiod coupled phenology module in LPJ-GUESS model v4.1: Optimizing estimation of terrestrial carbon and water processes

    Chen, S., Fu, Y. H., Li, M., Jia, Z., Cui, Y. & Tang, Jing, 2024, In: Geoscientific Model Development. 17, 7, p. 2509-2523 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. E-pub ahead of print

    A novel protocol for rapid deployment of heart rate data storage tags in Atlantic bluefin tuna Thunnus thynnus reveals cardiac responses to temperature and feeding

    Rouyer, T., Bonhommeau, S., Bernard, S., Kerzerho, V., Derridj, O., Bjarnason, Allal, H., Steffensen, John Fleng, Deguara, S., Wendling, B., Bal, G., Thambithurai, D. & Mckenzie, D. J., 2024, (E-pub ahead of print) In: Journal of Fish Biology.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    A pragmatic approach for integrating molecular tools into biodiversity conservation

    Bertola, L. D., Brüniche-Olsen, A., Kershaw, F., Russo, I. R. M., MacDonald, A. J., Sunnucks, P., Bruford, M. W., Cadena, C. D., Ewart, K. M., de Bruyn, M., Eldridge, M. D. B., Frankham, R., Guayasamin, J. M., Grueber, C. E., Hoareau, T. B., Hoban, S., Hohenlohe, P. A., Hunter, M. E., Kotze, A., Kuja, J. & 21 others, Lacy, R. C., Laikre, L., Lo, N., Meek, M. H., Mergeay, J., Mittan-Moreau, C., Neaves, L. E., O'Brien, D., Ochieng, J. W., Ogden, R., Orozco-terWengel, P., Páez-Vacas, M., Pierson, J., Ralls, K., Shaw, R. E., Sogbohossou, E. A., Stow, A., Steeves, T., Vernesi, C., Watsa, M. & Segelbacher, G., 2024, In: Conservation Science and Practice. 6, 1, 15 p., e13053.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    A scoping review of the use of bioacoustics to assess various components of farm animal welfare

    Coutant, M., Villain, Avelyne Sylvie Marie & Briefer, Elodie, 2024, In: Applied Animal Behaviour Science. 275, 14 p., 106286.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    A spatiotemporal atlas of mouse liver homeostasis and regeneration

    Xu, J., Guo, P., Hao, S., Shangguan, S., Shi, Q., Volpe, G., Huang, K., Zuo, J., An, J., Yuan, Y., Cheng, M., Deng, Q., Zhang, X., Lai, G., Nan, H., Wu, B., Shentu, X., Wu, L., Wei, X., Jiang, Y. & 38 others, Huang, X., Pan, F., Song, Y., Li, R., Wang, Z., Liu, C., Liu, S., Li, Y., Yang, T., Xu, Z., Du, W., Li, L., Ahmed, T., You, K., Dai, Z., Li, L., Qin, B., Li, Y., Lai, L., Qin, D., Chen, J., Fan, R., Li, Y., Hou, J., Ott, M., Sharma, A. D., Cantz, T., Schambach, A., Kristiansen, Karsten, Hutchins, A. P., Göttgens, B., Maxwell, P. H., Hui, L., Xu, X., Liu, L., CHEN, Ao, Lai, Y. & Esteban, M. A., 2024, In: Nature Genetics. 56, p. 953-969 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Acclimation of subarctic vegetation to warming and increased cloudiness

    Ndah, F. A., Maljanen, M., Kasurinen, A., Rinnan, Riikka, Michelsen, Anders, Kotilainen, T. & Kivimäenpää, M., 2024, In: Plant-Environment Interactions. 5, 1, 16 p., e10130.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Accounting for Winter Warming Events in the Ecosystem Model LPJ-GUESS: Evaluation and Outlook

    Pascual, D., Johansson, M., Pongracz, A. & Tang, Jing, 2024, In: Journal of Geophysical Research: Biogeosciences. 129, 3, 13 p., e2023JG007464.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Acid–base transporters in the context of tumor heterogeneity

    Pedersen, Stine Helene Falsig, 2024, In: Pflugers Archiv European Journal of Physiology. 476, p. 689–701 13 p.

    Research output: Contribution to journal › Review › Research › peer-review

  18. Published

    African bushpigs exhibit porous species boundaries and appeared in Madagascar concurrently with human arrival

    Balboa, R. F., Bertola, L. D., Brüniche-Olsen, A., Rasmussen, M. S., Liu, X., Besnard, G., Salmona, J., Santander, C. G., He, S., Zinner, D., Pedrono, M., Muwanika, V., Masembe, C., Schubert, M., Kuja, J., Quinn, L., Garcia-Erill, G., Stæger, F. F., Rakotoarivony, R., Henrique, M. & 14 others, Lin, Long, Wang, X., Heaton, M. P., Smith, T. P. L., Hanghøj, Kristian Ebbesen, Sinding, Mikkel Holger Strander, Atickem, A., Chikhi, L., Roos, C., Gaubert, P., Siegismund, Hans Redlef, Moltke, Ida, Albrechtsen, Anders & Heller, Rasmus, 2024, In: Nature Communications. 15, 1, 15 p., 172.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Ancient and Modern Genomes Reveal Microsatellites Maintain a Dynamic Equilibrium Through Deep Time

    McComish, B. J., Charleston, M. A., Parks, M., Baroni, C., Salvatore, M. C., Li, R., KU, thw266, Millar, C. D., Holland, B. R. & Lambert, D. M., 2024, In: Genome Biology and Evolution. 16, 3, 11 p., evae017.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. E-pub ahead of print

    Antibiotic implant irrigation and deep infection: A retrospective study of 1508 patients undergoing breast reconstruction with implants

    Hemmingsen, Mathilde Nejrup, Bennedsen, A. K., Kullab, R. B., Weltz, T. K., Ørholt, M., Norlin, C. B., Kalstrup, J., Bredgaard, R., Sørensen, Søren Johannes, Bjarnsholt, Thomas, Hølmich, Lisbet Rosenkrantz, Damsgaard, T. E., Vester-Glowinski, Peter Viktor & Herly, Mikkel, 2024, (E-pub ahead of print) In: Plastic and Reconstructive Surgery. 26 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Assessment of salt-affected soil in selected rice irrigation schemes in Tanzania: understanding salt types for optimizing management approaches

    Omar, M. M., Massawe, B. H. J., Shitindi, M. J., Pedersen, Ole, Meliyo, J. L. & Fue, K. G., 2024, In: Frontiers in Soil Science. 4, 14 p., 1372838.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. E-pub ahead of print

    BeetleAtlas: An Ontogenetic and Tissue-specific Transcriptomic Atlas of the Red Flour Beetle Tribolium castaneum

    Leader, D. P., Naseem, Muhammad Tayyib & Halberg, Kenneth Veland, 2024, (E-pub ahead of print) In: Journal of Molecular Biology. 168520.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    BloodSpot 3.0: a database of gene and protein expression data in normal and malignant haematopoiesis

    Gíslason, M. H., Demircan, G. S., Prachar, Marek, Furtwängler, Benjamin, Schwaller, J., Schoof, E., Porse, Bo Torben, Rapin, N. & Bagger, F., 2024, In: Nucleic acids symposium series. 52, D1, p. D1138–D1142 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    CI:Mor interactions in the lysogeny switches of Lactococcus lactis TP901-1 and Staphylococcus aureus φ13 bacteriophages

    Varming, A. K., Huang, Zhiyu, Hamad, G. M., Rasmussen, K. K., Ingmer, Hanne, Kilstrup, M. & Lo Leggio, Leila, 2024, In: Microbiome Research Reports. 3, 2, 16 p., 15.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Cadmium accumulation in organisms from a spruce plantation amended with wood ash - an environmental risk?

    Ekelund, Flemming, Cruz-Paredes, C., Jørgensen, Christian Hviid Friis, Vestergård, M., Rasmussen, K. R., Mortensen, Louise Hindborg, Kindtler, Nikolaj Lunding, Rønn, Regin, Christensen, Søren, Johansen, Jesper Liengaard & Kjøller, Rasmus, 2024, In: Trees, Forests and People. 15, 6 p., 100499.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Calls of the little auk (Alle alle) chicks reflect their behavioural contexts

    Osiecka, A. N., Briefer, Elodie, Kidawa, D., Żurawska, F. & Wojczulanis-Jakubas, K., 2024, In: PLoS ONE. 19, 2, 14 p., e0299033.

    Research output: Contribution to journal › Journal article › Research › peer-review

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